BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306429.2.1
(1175 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE942663.1|BE942663 EST422242 MGHG Medicago truncatula c... 92 1e-016
gb|BE942668.1|BE942668 EST422247 MGHG Medicago truncatula c... 92 1e-016
gb|BE942669.1|BE942669 EST422248 MGHG Medicago truncatula c... 92 1e-016
gb|BG451975.1|BG451975 NF043G10DT1F1081 Drought Medicago tr... 92 1e-016
gb|BQ164835.1|BQ164835 EST610704 KVKC Medicago truncatula c... 92 1e-016
gb|CB894215.1|CB894215 EST647007 HOGA Medicago truncatula c... 92 1e-016
gb|AW775240.1|AW775240 EST331962 GVN Medicago truncatula cD... 80 5e-013
gb|CA990695.1|CA990695 EST644203 GESD Medicago truncatula c... 80 5e-013
gb|BG644551.1|BG644551 EST506170 KV3 Medicago truncatula cD... 74 3e-011
gb|AC142526.5| Medicago truncatula clone mth2-34h20, comple... 72 1e-010
gb|CB894919.1|CB894919 EST647711 HOGA Medicago truncatula c... 68 2e-009
gb|CG975624.1|CG975624 MBEGW24TR mth2 Medicago truncatula g... 66 7e-009
gb|AI974368.1|AI974368 T110221e KV0 Medicago truncatula cDN... 66 7e-009
gb|AW690371.1|AW690371 NF032G03ST1F1000 Developing stem Med... 66 7e-009
gb|AW774538.1|AW774538 EST333689 KV3 Medicago truncatula cD... 66 7e-009
gb|AW775957.1|AW775957 EST335022 DSIL Medicago truncatula c... 66 7e-009
gb|AW776383.1|AW776383 EST335448 DSIL Medicago truncatula c... 66 7e-009
gb|BF635019.1|BF635019 NF078G09DT1F1071 Drought Medicago tr... 66 7e-009
gb|BF639756.1|BF639756 NF018B01IN1F1010 Insect herbivory Me... 66 7e-009
gb|BF644263.1|BF644263 NF061G08EC1F1067 Elicited cell cultu... 66 7e-009
gb|BG455279.1|BG455279 NF046E05PL1F1037 Phosphate starved l... 66 7e-009
gb|BG644768.1|BG644768 EST506387 KV3 Medicago truncatula cD... 66 7e-009
gb|BG647665.1|BG647665 EST509284 HOGA Medicago truncatula c... 66 7e-009
gb|BI270061.1|BI270061 NF004F06FL1F1059 Developing flower M... 66 7e-009
gb|BI270893.1|BI270893 NF005D06FL1F1058 Developing flower M... 66 7e-009
gb|BI271421.1|BI271421 NF051D11FL1F1094 Developing flower M... 66 7e-009
gb|BQ147578.1|BQ147578 NF044D05FL1F1045 Developing flower M... 66 7e-009
gb|CB892692.1|CB892692 EST645484 HOGA Medicago truncatula c... 66 7e-009
gb|CB893909.1|CB893909 EST646701 HOGA Medicago truncatula c... 66 7e-009
gb|CB894137.1|CB894137 EST646929 HOGA Medicago truncatula c... 66 7e-009
gb|CX529201.1|CX529201 s13dNF06C03MJ018_244460 Methyl Jasmo... 66 7e-009
gb|CX529558.1|CX529558 s13dNF97F10MJ079_245167 Methyl Jasmo... 66 7e-009
gb|CX534889.1|CX534889 s13dNF0MC11MJ086_336181 Methyl Jasmo... 66 7e-009
gb|CX542541.1|CX542541 s13dNF57F05GS047_474300 Germinating ... 66 7e-009
gb|BF645662.1|BF645662 NF020A02EC1F1008 Elicited cell cultu... 60 4e-007
gb|AW686495.1|AW686495 NF038F12NR1F1000 Nodulated root Medi... 58 2e-006
gb|CB894140.1|CB894140 EST646932 HOGA Medicago truncatula c... 58 2e-006
gb|CX538745.1|CX538745 s13dNF0AA04GS021_460744 Germinating ... 52 1e-004
gb|AL388409.1|AL388409 MtBC48D05F2 MtBC Medicago truncatula... 50 4e-004
gb|AW695008.2|AW695008 NF082D09ST1F1077 Developing stem Med... 48 0.002
gb|BG588912.1|BG588912 EST490721 MHRP- Medicago truncatula ... 48 0.002
gb|BI268967.1|BI268967 NF002C05IR1F1037 Irradiated Medicago... 48 0.002
gb|BQ147135.1|BQ147135 NF034A07FL1F1052 Developing flower M... 48 0.002
gb|BQ147412.1|BQ147412 NF040C12FL1F1097 Developing flower M... 48 0.002
gb|BQ148664.1|BQ148664 NF080C11FL1F1086 Developing flower M... 48 0.002
gb|BG644497.1|BG644497 EST506116 KV3 Medicago truncatula cD... 44 0.026
gb|CX533272.1|CX533272 s13dNF0ED05MJ042_319705 Methyl Jasmo... 44 0.026
gb|AL369795.1|AL369795 MtBA33E01R1 MtBA Medicago truncatula... 42 0.10
gb|BQ153640.1|BQ153640 NF040G08IR1F1067 Irradiated Medicago... 42 0.10
gb|AC147484.21| Medicago truncatula clone mth2-52b4, comple... 40 0.41
>gb|BE942663.1|BE942663 EST422242 MGHG Medicago truncatula cDNA clone pMGHG-9G13, mRNA
sequence
Length = 551
Score = 91.7 bits (46), Expect = 1e-016
Identities = 172/214 (80%)
Strand = Plus / Plus
Query: 57 tacttcaatccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaatt 116
|||||||| ||||| ||||| || |||||||| ||| |||| ||||| || | || |||
Sbjct: 87 tacttcaacccagtgggtgcacaccctagtggttatattggggaggatcctcacgggatt 146
Query: 117 cccaacaatcttatgccctatgttcagcaagttgcggttggtaggaggccagctctgaca 176
|| || ||||||||||| | | |||||||||| |||||||| || | || || ||||||
Sbjct: 147 ccaaataatcttatgccatttattcagcaagtagcggttggcagacgtcctgcactgaca 206
Query: 177 gttttaggaaatgactatgcaacaagagacgggactggggtccgagattacatccatgtg 236
||||| |||||||| ||| |||| || || |||||||| || |||||||| |||||
Sbjct: 207 gtttttggaaatgattataaaacagttgatggtactggggttcgggattacattcatgtt 266
Query: 237 gttgaccttgctgacggacatattgctgcattgc 270
||||| | ||||| || ||||||||||||||||
Sbjct: 267 gttgatttagctgatggccatattgctgcattgc 300
Score = 46.1 bits (23), Expect = 0.007
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 343 tggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
||||||| |||| ||| ||||||||||| ||||| ||||||||
Sbjct: 370 tggagatggttagagcttttgagaaggcatctggaaagaaaat 412
>gb|BE942668.1|BE942668 EST422247 MGHG Medicago truncatula cDNA clone pMGHG-9G23, mRNA
sequence
Length = 630
Score = 91.7 bits (46), Expect = 1e-016
Identities = 172/214 (80%)
Strand = Plus / Plus
Query: 57 tacttcaatccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaatt 116
|||||||| ||||| ||||| || |||||||| ||| |||| ||||| || | || |||
Sbjct: 90 tacttcaacccagtgggtgcacaccctagtggttatattggggaggatcctcacgggatt 149
Query: 117 cccaacaatcttatgccctatgttcagcaagttgcggttggtaggaggccagctctgaca 176
|| || ||||||||||| | | |||||||||| |||||||| || | || || ||||||
Sbjct: 150 ccaaataatcttatgccatttattcagcaagtagcggttggcagacgtcctgcactgaca 209
Query: 177 gttttaggaaatgactatgcaacaagagacgggactggggtccgagattacatccatgtg 236
||||| |||||||| ||| |||| || || |||||||| || |||||||| |||||
Sbjct: 210 gtttttggaaatgattataaaacagttgatggtactggggttcgggattacattcatgtt 269
Query: 237 gttgaccttgctgacggacatattgctgcattgc 270
||||| | ||||| || ||||||||||||||||
Sbjct: 270 gttgatttagctgatggccatattgctgcattgc 303
Score = 79.8 bits (40), Expect = 5e-013
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 462 cttaactggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggcc 521
||||| ||||| |||||||| || ||||| || |||||||| || |||||||| |||||
Sbjct: 492 cttaagtggaaggcaaaatatggaattgatgaaatgtgccgtgatcaatggaattgggct 551
Query: 522 agcaagaacccttatggctatggatcacctga 553
||||| |||||||| ||||||||||| |||||
Sbjct: 552 agcaaaaacccttacggctatggatctcctga 583
Score = 46.1 bits (23), Expect = 0.007
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 343 tggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
||||||| |||| ||| ||||||||||| ||||| ||||||||
Sbjct: 373 tggagatggttagagcttttgagaaggcatctggaaagaaaat 415
>gb|BE942669.1|BE942669 EST422248 MGHG Medicago truncatula cDNA clone pMGHG-9I1, mRNA
sequence
Length = 614
Score = 91.7 bits (46), Expect = 1e-016
Identities = 172/214 (80%)
Strand = Plus / Plus
Query: 57 tacttcaatccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaatt 116
|||||||| ||||| ||||| || |||||||| ||| |||| ||||| || | || |||
Sbjct: 74 tacttcaacccagtgggtgcacaccctagtggttatattggggaggatcctcacgggatt 133
Query: 117 cccaacaatcttatgccctatgttcagcaagttgcggttggtaggaggccagctctgaca 176
|| || ||||||||||| | | |||||||||| |||||||| || | || || ||||||
Sbjct: 134 ccaaataatcttatgccatttattcagcaagtagcggttggcagacgtcctgcactgaca 193
Query: 177 gttttaggaaatgactatgcaacaagagacgggactggggtccgagattacatccatgtg 236
||||| |||||||| ||| |||| || || |||||||| || |||||||| |||||
Sbjct: 194 gtttttggaaatgattataaaacagttgatggtactggggttcgggattacattcatgtt 253
Query: 237 gttgaccttgctgacggacatattgctgcattgc 270
||||| | ||||| || ||||||||||||||||
Sbjct: 254 gttgatttagctgatggccatattgctgcattgc 287
Score = 79.8 bits (40), Expect = 5e-013
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 462 cttaactggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggcc 521
||||| ||||| |||||||| || ||||| || |||||||| || |||||||| |||||
Sbjct: 476 cttaagtggaaggcaaaatatggaattgatgaaatgtgccgtgatcaatggaattgggct 535
Query: 522 agcaagaacccttatggctatggatcacctga 553
||||| |||||||| ||||||||||| |||||
Sbjct: 536 agcaaaaacccttacggctatggatctcctga 567
Score = 46.1 bits (23), Expect = 0.007
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 343 tggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
||||||| |||| ||| ||||||||||| ||||| ||||||||
Sbjct: 357 tggagatggttagagcttttgagaaggcatctggaaagaaaat 399
>gb|BG451975.1|BG451975 NF043G10DT1F1081 Drought Medicago truncatula cDNA clone NF043G10DT
5', mRNA sequence
Length = 635
Score = 91.7 bits (46), Expect = 1e-016
Identities = 172/214 (80%)
Strand = Plus / Plus
Query: 57 tacttcaatccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaatt 116
|||||||| ||||| ||||| || |||||||| ||| |||| ||||| || | || |||
Sbjct: 115 tacttcaacccagtgggtgcacaccctagtggttatattggggaggatcctcacgggatt 174
Query: 117 cccaacaatcttatgccctatgttcagcaagttgcggttggtaggaggccagctctgaca 176
|| || ||||||||||| | | |||||||||| |||||||| || | || || ||||||
Sbjct: 175 ccaaataatcttatgccatttattcagcaagtagcggttggcagacgtcctgcactgaca 234
Query: 177 gttttaggaaatgactatgcaacaagagacgggactggggtccgagattacatccatgtg 236
||||| |||||||| ||| |||| || || |||||||| || |||||||| |||||
Sbjct: 235 gtttttggaaatgattataaaacagttgatggtactggggttcgggattacattcatgtt 294
Query: 237 gttgaccttgctgacggacatattgctgcattgc 270
||||| | ||||| || ||||||||||||||||
Sbjct: 295 gttgatttagctgatggccatattgctgcattgc 328
Score = 73.8 bits (37), Expect = 3e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 462 cttaactggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggcc 521
||||| ||||| |||||||| || ||||| || |||||||| || |||||||| |||||
Sbjct: 517 cttaagtggaaggcaaaatatggaattgatgaaatgtgccgtgatcaatggaattgggct 576
Query: 522 agcaagaacccttatggctatggatcacctga 553
| ||| |||||||| ||||||||||| |||||
Sbjct: 577 ancaaaaacccttacggctatggatctcctga 608
Score = 46.1 bits (23), Expect = 0.007
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 343 tggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
||||||| |||| ||| ||||||||||| ||||| ||||||||
Sbjct: 398 tggagatggttagagcttttgagaaggcatctggaaagaaaat 440
>gb|BQ164835.1|BQ164835 EST610704 KVKC Medicago truncatula cDNA clone pKVKC-2A5, mRNA
sequence
Length = 665
Score = 91.7 bits (46), Expect = 1e-016
Identities = 172/214 (80%)
Strand = Plus / Plus
Query: 57 tacttcaatccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaatt 116
|||||||| ||||| ||||| || |||||||| ||| |||| ||||| || | || |||
Sbjct: 432 tacttcaacccagtgggtgcacaccctagtggttatattggggaggatcctcacgggatt 491
Query: 117 cccaacaatcttatgccctatgttcagcaagttgcggttggtaggaggccagctctgaca 176
|| || ||||||||||| | | |||||||||| |||||||| || | || || ||||||
Sbjct: 492 ccaaataatcttatgccatttattcagcaagtagcggttggcagacgtcctgcactgaca 551
Query: 177 gttttaggaaatgactatgcaacaagagacgggactggggtccgagattacatccatgtg 236
||||| |||||||| ||| |||| || || |||||||| || |||||||| |||||
Sbjct: 552 gtttttggaaatgattataaaacagttgatggtactggggttcgggattacattcatgtt 611
Query: 237 gttgaccttgctgacggacatattgctgcattgc 270
||||| | ||||| || ||||||||||||||||
Sbjct: 612 gttgatttagctgatggccatattgctgcattgc 645
>gb|CB894215.1|CB894215 EST647007 HOGA Medicago truncatula cDNA clone HOGA-30O14, mRNA
sequence
Length = 788
Score = 91.7 bits (46), Expect = 1e-016
Identities = 172/214 (80%)
Strand = Plus / Plus
Query: 57 tacttcaatccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaatt 116
|||||||| ||||| ||||| || |||||||| ||| |||| ||||| || | || |||
Sbjct: 155 tacttcaacccagtgggtgcacaccctagtggttatattggggaggatcctcacgggatt 214
Query: 117 cccaacaatcttatgccctatgttcagcaagttgcggttggtaggaggccagctctgaca 176
|| || ||||||||||| | | |||||||||| |||||||| || | || || ||||||
Sbjct: 215 ccaaataatcttatgccatttattcagcaagtagcggttggcagacgtcctgcactgaca 274
Query: 177 gttttaggaaatgactatgcaacaagagacgggactggggtccgagattacatccatgtg 236
||||| |||||||| ||| |||| || || |||||||| || |||||||| |||||
Sbjct: 275 gtttttggaaatgattataaaacagttgatggtactggggttcgggattacattcatgtt 334
Query: 237 gttgaccttgctgacggacatattgctgcattgc 270
||||| | ||||| || ||||||||||||||||
Sbjct: 335 gttgatttagctgatggccatattgctgcattgc 368
Score = 79.8 bits (40), Expect = 5e-013
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 462 cttaactggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggcc 521
||||| ||||| |||||||| || ||||| || |||||||| || |||||||| |||||
Sbjct: 557 cttaagtggaaggcaaaatatggaattgatgaaatgtgccgtgatcaatggaattgggct 616
Query: 522 agcaagaacccttatggctatggatcacctga 553
||||| |||||||| ||||||||||| |||||
Sbjct: 617 agcaaaaacccttacggctatggatctcctga 648
Score = 46.1 bits (23), Expect = 0.007
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 343 tggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
||||||| |||| ||| ||||||||||| ||||| ||||||||
Sbjct: 438 tggagatggttagagcttttgagaaggcatctggaaagaaaat 480
>gb|AW775240.1|AW775240 EST331962 GVN Medicago truncatula cDNA clone pGVN-30K15, mRNA
sequence
Length = 552
Score = 79.8 bits (40), Expect = 5e-013
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 462 cttaactggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggcc 521
||||| ||||| |||||||| || ||||| || |||||||| || |||||||| |||||
Sbjct: 88 cttaagtggaaggcaaaatatggaattgatgaaatgtgccgtgatcaatggaattgggct 147
Query: 522 agcaagaacccttatggctatggatcacctga 553
||||| |||||||| ||||||||||| |||||
Sbjct: 148 agcaaaaacccttacggctatggatctcctga 179
>gb|CA990695.1|CA990695 EST644203 GESD Medicago truncatula cDNA clone GESD-29H3, mRNA
sequence
Length = 697
Score = 79.8 bits (40), Expect = 5e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 462 cttaactggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggcc 521
||||| ||||| |||||||| || ||||| || |||||||| || |||||||| |||||
Sbjct: 434 cttaagtggaaggcaaaatatggaattgatgaaatgtgccgtgatcaatggaattgggct 375
Query: 522 agcaagaacccttatggctatggatcacctga 553
||||| |||||||| ||||||||||| |||||
Sbjct: 374 agcaaaaacccttacggctatggatctcctga 343
Score = 46.1 bits (23), Expect = 0.007
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 343 tggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
||||||| |||| ||| ||||||||||| ||||| ||||||||
Sbjct: 553 tggagatggttagagcttttgagaaggcatctggaaagaaaat 511
Score = 42.1 bits (21), Expect = 0.10
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 210 actggggtccgagattacatccatgtggttgaccttgctgacggacatattgctgcattg 269
|||||||| || |||| ||| ||||| ||||| | ||||| || |||||||||||||||
Sbjct: 683 actggggttcgggattccattcatgttgttgatttagctgatggccatattgctgcattg 624
Query: 270 c 270
|
Sbjct: 623 c 623
>gb|BG644551.1|BG644551 EST506170 KV3 Medicago truncatula cDNA clone pKV3-37J19 5' end,
mRNA sequence
Length = 738
Score = 73.8 bits (37), Expect = 3e-011
Identities = 169/213 (79%)
Strand = Plus / Plus
Query: 57 tacttcaatccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaatt 116
|||||||| || |||||||| ||||| ||||| || |||| ||||| || || ||||||
Sbjct: 274 tacttcaaccccgttggtgcacatcccagtggtcatattggtgaggatcctcgcggaatt 333
Query: 117 cccaacaatcttatgccctatgttcagcaagttgcggttggtaggaggccagctctgaca 176
|||||||| || ||||| | ||||||||||||||| ||||| || | | || |||||
Sbjct: 334 cccaacaacctcatgccttttgttcagcaagttgcagttggcagacgctctgcattgaca 393
Query: 177 gttttaggaaatgactatgcaacaagagacgggactggggtccgagattacatccatgtg 236
||||| |||| || ||| ||||| || || ||||| ||||| |||||||| |||||
Sbjct: 394 gtttttggaacagattatagcacaagtgatggaactggagtccgtgattacattcatgtt 453
Query: 237 gttgaccttgctgacggacatattgctgcattg 269
||||| | ||||| || || ||||||||||||
Sbjct: 454 gttgatttagctgatgggcacattgctgcattg 486
Score = 46.1 bits (23), Expect = 0.007
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 462 cttaactggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggc 520
||||||||||| || ||||| || ||||| || |||||||| || |||||||| |||||
Sbjct: 676 cttaactggaaggctaaatatggcattgatgatatgtgccgtgatcaatggaattgggc 734
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence
Length = 113622
Score = 71.9 bits (36), Expect = 1e-010
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 474 gcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggccagcaagaaccct 533
|||||||| || ||||| || |||||||| || |||||||| ||||| ||||| ||||||
Sbjct: 38802 gcaaaatatggaattgatgaaatgtgccgtgatcaatggaattgggctagcaaaaaccct 38743
Query: 534 tatggctatggatcacctga 553
|| ||||||||||| |||||
Sbjct: 38742 tacggctatggatctcctga 38723
Score = 67.9 bits (34), Expect = 2e-009
Identities = 109/134 (81%)
Strand = Plus / Minus
Query: 57 tacttcaatccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaatt 116
|||||||| ||||| ||||| || |||||||| ||| |||| ||||| || | || |||
Sbjct: 40217 tacttcaacccagtgggtgcacaccctagtggttatattggggaggatcctcacgggatt 40158
Query: 117 cccaacaatcttatgccctatgttcagcaagttgcggttggtaggaggccagctctgaca 176
|| || ||||||||||| | | |||||||||| |||||||| || | || || ||||||
Sbjct: 40157 ccaaataatcttatgccatttattcagcaagtagcggttggcagacgtcctgcactgaca 40098
Query: 177 gttttaggaaatga 190
||||| ||||||||
Sbjct: 40097 gtttttggaaatga 40084
Score = 42.1 bits (21), Expect = 0.10
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 222 gattacatccatgtggttgaccttgctgacggacatattgctgcattgc 270
|||||||| ||||| ||||| | ||||| || ||||||||||||||||
Sbjct: 39833 gattacattcatgttgttgatttagctgatggccatattgctgcattgc 39785
>gb|CB894919.1|CB894919 EST647711 HOGA Medicago truncatula cDNA clone HOGA-32N4, mRNA
sequence
Length = 810
Score = 67.9 bits (34), Expect = 2e-009
Identities = 109/134 (81%)
Strand = Plus / Plus
Query: 57 tacttcaatccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaatt 116
|||||||| ||||| ||||| || |||||||| ||| |||| ||||| || | || |||
Sbjct: 646 tacttcaacccagtgggtgcacaccctagtggttatattggggaggatcctcacgggatt 705
Query: 117 cccaacaatcttatgccctatgttcagcaagttgcggttggtaggaggccagctctgaca 176
|| || ||||||||||| | | |||||||||| |||||||| || | || || ||||||
Sbjct: 706 ccaaataatcttatgccatttattcagcaagtagcggttggcagacgtcctgcactgaca 765
Query: 177 gttttaggaaatga 190
||||| ||||||||
Sbjct: 766 gtttttggaaatga 779
>gb|CG975624.1|CG975624 MBEGW24TR mth2 Medicago truncatula genomic clone 53D23, DNA
sequence
Length = 762
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 599 gaatggaagatcattttactgagatacttcaatccagttgg 559
>gb|AI974368.1|AI974368 T110221e KV0 Medicago truncatula cDNA clone pKV0-1K23, mRNA
sequence
Length = 442
Score = 65.9 bits (33), Expect = 7e-009
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 477 aaatacggtattgaagagatgtgccgcgaccaatggaactgggccagcaagaacccttat 536
||||| || ||||| || |||||||| || |||||||| ||||| ||||| ||||||||
Sbjct: 442 aaatatggaattgatgaaatgtgccgtgatcaatggaattgggctagcaaaaacccttac 383
Query: 537 ggctatggatcacctga 553
||||||||||| |||||
Sbjct: 382 ggctatggatctcctga 366
>gb|AW690371.1|AW690371 NF032G03ST1F1000 Developing stem Medicago truncatula cDNA clone
NF032G03ST 5', mRNA sequence
Length = 614
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 376 gaatggaagatcattttactgagatacttcaatccagttgg 416
>gb|AW774538.1|AW774538 EST333689 KV3 Medicago truncatula cDNA clone pKV3-22L16, mRNA
sequence
Length = 651
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 528 gaatggaagatcattttactgagatacttcaatccagttgg 568
>gb|AW775957.1|AW775957 EST335022 DSIL Medicago truncatula cDNA clone pDSIL-3J7, mRNA
sequence
Length = 690
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 373 gaatggaagatcattttactgagatacttcaatccagttgg 413
>gb|AW776383.1|AW776383 EST335448 DSIL Medicago truncatula cDNA clone pDSIL-7B12, mRNA
sequence
Length = 583
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 292 gaatggaagatcattttactgagatacttcaatccagttgg 332
>gb|BF635019.1|BF635019 NF078G09DT1F1071 Drought Medicago truncatula cDNA clone NF078G09DT
5', mRNA sequence
Length = 694
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 420 gaatggaagatcattttactgagatacttcaatccagttgg 460
>gb|BF639756.1|BF639756 NF018B01IN1F1010 Insect herbivory Medicago truncatula cDNA clone
NF018B01IN 5', mRNA sequence
Length = 282
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 220 gaatggaagatcattttactgagatacttcaatccagttgg 260
>gb|BF644263.1|BF644263 NF061G08EC1F1067 Elicited cell culture Medicago truncatula cDNA
clone NF061G08EC 5', mRNA sequence
Length = 620
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 448 gaatggaagatcattttactgagatacttcaatccagttgg 488
>gb|BG455279.1|BG455279 NF046E05PL1F1037 Phosphate starved leaf Medicago truncatula cDNA
clone NF046E05PL 5', mRNA sequence
Length = 685
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 383 gaatggaagatcattttactgagatacttcaatccagttgg 423
>gb|BG644768.1|BG644768 EST506387 KV3 Medicago truncatula cDNA clone pKV3-38C18 5' end,
mRNA sequence
Length = 718
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 505 gaatggaagatcattttactgagatacttcaatccagttgg 545
>gb|BG647665.1|BG647665 EST509284 HOGA Medicago truncatula cDNA clone pHOGA-17F13 5' end,
mRNA sequence
Length = 718
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 529 gaatggaagatcattttactgagatacttcaatccagttgg 569
>gb|BI270061.1|BI270061 NF004F06FL1F1059 Developing flower Medicago truncatula cDNA clone
NF004F06FL 5', mRNA sequence
Length = 626
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 274 gaatggaagatcattttactgagatacttcaatccagttgg 314
>gb|BI270893.1|BI270893 NF005D06FL1F1058 Developing flower Medicago truncatula cDNA clone
NF005D06FL 5', mRNA sequence
Length = 566
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 268 gaatggaagatcattttactgagatacttcaatccagttgg 308
>gb|BI271421.1|BI271421 NF051D11FL1F1094 Developing flower Medicago truncatula cDNA clone
NF051D11FL 5', mRNA sequence
Length = 648
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 419 gaatggaagatcattttactgagatacttcaatccagttgg 459
>gb|BQ147578.1|BQ147578 NF044D05FL1F1045 Developing flower Medicago truncatula cDNA clone
NF044D05FL 5', mRNA sequence
Length = 489
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 439 gaatggaagatcattttactgagatacttcaatccagttgg 479
>gb|CB892692.1|CB892692 EST645484 HOGA Medicago truncatula cDNA clone HOGA-19B13, mRNA
sequence
Length = 798
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 583 gaatggaagatcattttactgagatacttcaatccagttgg 623
>gb|CB893909.1|CB893909 EST646701 HOGA Medicago truncatula cDNA clone HOGA-29M8, mRNA
sequence
Length = 384
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 138 gaatggaagatcattttactgagatacttcaatccagttgg 178
>gb|CB894137.1|CB894137 EST646929 HOGA Medicago truncatula cDNA clone HOGA-30O3, mRNA
sequence
Length = 579
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 279 gaatggaagatcattttactgagatacttcaatccagttgg 319
>gb|CX529201.1|CX529201 s13dNF06C03MJ018_244460 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 645
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 352 gaatggaagatcattttactgagatacttcaatccagttgg 392
>gb|CX529558.1|CX529558 s13dNF97F10MJ079_245167 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 606
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 397 gaatggaagatcattttactgagatacttcaatccagttgg 437
>gb|CX534889.1|CX534889 s13dNF0MC11MJ086_336181 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 550
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 452 gaatggaagatcattttactgagatacttcaatccagttgg 492
>gb|CX542541.1|CX542541 s13dNF57F05GS047_474300 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 507
Score = 65.9 bits (33), Expect = 7e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||||||||
Sbjct: 272 gaatggaagatcattttactgagatacttcaatccagttgg 312
>gb|BF645662.1|BF645662 NF020A02EC1F1008 Elicited cell culture Medicago truncatula cDNA
clone NF020A02EC 5', mRNA sequence
Length = 672
Score = 60.0 bits (30), Expect = 4e-007
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||||||||| || |||||||||||| ||||
Sbjct: 551 gaatggaagatcattttactgagatacttcaatccanttgg 591
>gb|AW686495.1|AW686495 NF038F12NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF038F12NR 5', mRNA sequence
Length = 653
Score = 58.0 bits (29), Expect = 2e-006
Identities = 101/125 (80%)
Strand = Plus / Plus
Query: 57 tacttcaatccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaatt 116
|||||||| ||||| ||||| || |||||||| ||| |||| ||||| || | || |||
Sbjct: 488 tacttcaacccagtgggtgcacaccctagtggttatattggggaggatcctcacgggatt 547
Query: 117 cccaacaatcttatgccctatgttcagcaagttgcggttggtaggaggccagctctgaca 176
|| || ||||||||||| | | |||||||||| |||||||| || | || || ||||||
Sbjct: 548 ccaaataatcttatgccatttattcagcaagtagcggttggcagacgtcctgcactgaca 607
Query: 177 gtttt 181
|||||
Sbjct: 608 gtttt 612
>gb|CB894140.1|CB894140 EST646932 HOGA Medicago truncatula cDNA clone HOGA-30O9, mRNA
sequence
Length = 413
Score = 58.0 bits (29), Expect = 2e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
||||||| |||||||||||| || |||||||||||||||||
Sbjct: 48 gaatggatgatcattttactgagatacttcaatccagttgg 88
Score = 48.1 bits (24), Expect = 0.002
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 330 ggtacatctgtgctggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
|||||||||||||| || || ||| ||||||||||| |||||||| ||||||||
Sbjct: 345 ggtacatctgtgcttgaaatggtttctgcatttgagaaagcttctggcaagaaaat 400
>gb|CX538745.1|CX538745 s13dNF0AA04GS021_460744 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 449
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatc 66
|||||||||||||||||||| || ||||||||||
Sbjct: 416 gaatggaagatcattttactgagatacttcaatc 449
>gb|AL388409.1|AL388409 MtBC48D05F2 MtBC Medicago truncatula cDNA clone MtBC48D05 T3, mRNA
sequence
Length = 493
Score = 50.1 bits (25), Expect = 4e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 509 atggaactgggccagcaagaacccttatggctatggatcacctga 553
|||||| ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 1 atggaattgggctagcaaaaacccttacggctatggatctcctga 45
>gb|AW695008.2|AW695008 NF082D09ST1F1077 Developing stem Medicago truncatula cDNA clone
NF082D09ST 5', mRNA sequence
Length = 584
Score = 48.1 bits (24), Expect = 0.002
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 330 ggtacatctgtgctggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
|||||||||||||| || || ||| ||||||||||| |||||||| ||||||||
Sbjct: 504 ggtacatctgtgcttgaaatggtttctgcatttgagaaagcttctggcaagaaaat 449
>gb|BG588912.1|BG588912 EST490721 MHRP- Medicago truncatula cDNA clone pMHRP-57N2, mRNA
sequence
Length = 679
Score = 48.1 bits (24), Expect = 0.002
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 330 ggtacatctgtgctggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
|||||||||||||| || || ||| ||||||||||| |||||||| ||||||||
Sbjct: 164 ggtacatctgtgcttgaaatggtttctgcatttgagaaagcttctggcaagaaaat 219
>gb|BI268967.1|BI268967 NF002C05IR1F1037 Irradiated Medicago truncatula cDNA clone
NF002C05IR 5', mRNA sequence
Length = 326
Score = 48.1 bits (24), Expect = 0.002
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 330 ggtacatctgtgctggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
|||||||||||||| || || ||| ||||||||||| |||||||| ||||||||
Sbjct: 172 ggtacatctgtgcttgaaatggtttctgcatttgagaaagcttctggcaagaaaat 227
>gb|BQ147135.1|BQ147135 NF034A07FL1F1052 Developing flower Medicago truncatula cDNA clone
NF034A07FL 5', mRNA sequence
Length = 567
Score = 48.1 bits (24), Expect = 0.002
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 330 ggtacatctgtgctggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
|||||||||||||| || || ||| ||||||||||| |||||||| ||||||||
Sbjct: 108 ggtacatctgtgcttgaaatggtttctgcatttgagaaagcttctggcaagaaaat 163
>gb|BQ147412.1|BQ147412 NF040C12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF040C12FL 5', mRNA sequence
Length = 586
Score = 48.1 bits (24), Expect = 0.002
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 330 ggtacatctgtgctggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
|||||||||||||| || || ||| ||||||||||| |||||||| ||||||||
Sbjct: 68 ggtacatctgtgcttgaaatggtttctgcatttgagaaagcttctggcaagaaaat 123
>gb|BQ148664.1|BQ148664 NF080C11FL1F1086 Developing flower Medicago truncatula cDNA clone
NF080C11FL 5', mRNA sequence
Length = 635
Score = 48.1 bits (24), Expect = 0.002
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 330 ggtacatctgtgctggagattgttaaagcatttgagaaggcttctgggaagaaaat 385
|||||||||||||| || || ||| ||||||||||| |||||||| ||||||||
Sbjct: 191 ggtacatctgtgcttgaaatggtttctgcatttgagaaagcttctggcaagaaaat 246
>gb|BG644497.1|BG644497 EST506116 KV3 Medicago truncatula cDNA clone pKV3-37O16 5' end,
mRNA sequence
Length = 793
Score = 44.1 bits (22), Expect = 0.026
Identities = 83/102 (81%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 57 tacttcaatccagttggtgctcatcctagtggatatcttggcg-aggacccacgaggaat 115
|||||||| ||||| ||||| || |||||||| ||| |||| | |||| || | || ||
Sbjct: 672 tacttcaacccagtgggtgcacaccctagtggttatattgggggaggatcctcacgggat 731
Query: 116 tcccaacaatcttatgccctatgttcagcaagttgcggttgg 157
||| || ||||||||||| | | |||||||||| ||||||||
Sbjct: 732 tccaaataatcttatgccatttattcagcaagtagcggttgg 773
>gb|CX533272.1|CX533272 s13dNF0ED05MJ042_319705 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 637
Score = 44.1 bits (22), Expect = 0.026
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttc 62
|||||||||||||||||||| || ||||||
Sbjct: 608 gaatggaagatcattttactgagatacttc 637
>gb|AL369795.1|AL369795 MtBA33E01R1 MtBA Medicago truncatula cDNA clone MtBA33E01 T7, mRNA
sequence
Length = 541
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 357 gcatttgagaaggcttctgggaagaaaat 385
||||||||||| |||||||| ||||||||
Sbjct: 9 gcatttgagaaagcttctggcaagaaaat 37
>gb|BQ153640.1|BQ153640 NF040G08IR1F1067 Irradiated Medicago truncatula cDNA clone
NF040G08IR 5', mRNA sequence
Length = 803
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 357 gcatttgagaaggcttctgggaagaaaat 385
||||||||||| |||||||| ||||||||
Sbjct: 134 gcatttgagaaagcttctggcaagaaaat 162
>gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete sequence
Length = 119559
Score = 40.1 bits (20), Expect = 0.41
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 837 aacccactatccgagattga 856
||||||||||||||||||||
Sbjct: 56079 aacccactatccgagattga 56098
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 248,495
Number of Sequences: 392609
Number of extensions: 248495
Number of successful extensions: 16106
Number of sequences better than 0.5: 50
Number of HSP's better than 0.5 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16017
Number of HSP's gapped (non-prelim): 82
length of query: 1175
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1155
effective length of database: 433,880,813
effective search space: 501132339015
effective search space used: 501132339015
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)