BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276343.2.2
(1340 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL365946.1|AL365946 MtBA03D01F1 MtBA Medicago truncatula... 98 2e-018
gb|AW685470.1|AW685470 NF030B12NR1F1000 Nodulated root Medi... 90 6e-016
gb|BF004731.1|BF004731 EST433229 KV1 Medicago truncatula cD... 90 6e-016
gb|BF004732.1|BF004732 EST433230 KV1 Medicago truncatula cD... 90 6e-016
gb|BG450144.1|BG450144 NF014G11DT1F1088 Drought Medicago tr... 90 6e-016
gb|BG450786.1|BG450786 NF093A10DT1F1071 Drought Medicago tr... 90 6e-016
gb|BG451984.1|BG451984 NF043B09DT1F1074 Drought Medicago tr... 88 2e-015
gb|BF003783.1|BF003783 EST432281 KV1 Medicago truncatula cD... 86 9e-015
gb|BE203172.1|BE203172 EST403194 KV1 Medicago truncatula cD... 78 2e-012
gb|BF631848.1|BF631848 NF025B07DT1F1058 Drought Medicago tr... 78 2e-012
gb|BI268920.1|BI268920 NF041F11DT1F1094 Drought Medicago tr... 78 2e-012
gb|CX523183.1|CX523183 s13dNF80F06VI059_472170 Virus-Infect... 78 2e-012
gb|CX523553.1|CX523553 s13dNF84G11VI088_474826 Virus-Infect... 78 2e-012
gb|BF635422.1|BF635422 NF068E02DT1F1018 Drought Medicago tr... 74 3e-011
gb|BG447798.1|BG447798 NF069H04EC1F1041 Elicited cell cultu... 74 3e-011
gb|BG447832.1|BG447832 NF103G06EC1F1050 Elicited cell cultu... 74 3e-011
gb|CB891792.1|CB891792 EST648761 KV3 Medicago truncatula cD... 74 3e-011
gb|CX528309.1|CX528309 s13dNF54A07AT053_517130 Aphid-Infect... 74 3e-011
gb|BG452152.1|BG452152 NF085F04LF1F1043 Developing leaf Med... 62 1e-007
gb|CX526853.1|CX526853 s13dNF27D02AT026_514218 Aphid-Infect... 62 1e-007
gb|AC135801.24| Medicago truncatula clone mth2-23o16, compl... 62 1e-007
gb|BE315703.2|BE315703 NF025B11LF1F1089 Developing leaf Med... 48 0.002
emb|CR324769.1| mte1-52E15FM1 BAC end, cultivar Jemalong A1... 46 0.008
emb|CR333348.1| mte1-63M15RM1 BAC end, cultivar Jemalong A1... 46 0.008
emb|CR340585.1| mte1-72F21RM1 BAC end, cultivar Jemalong A1... 46 0.008
emb|CR311894.1| mte1-34A4RM1 BAC end, cultivar Jemalong A17... 46 0.008
gb|BF003997.1|BF003997 EST432486 KV1 Medicago truncatula cD... 46 0.008
gb|BG645950.1|BG645950 EST507569 KV3 Medicago truncatula cD... 46 0.008
gb|BI308367.1|BI308367 EST529777 GPOD Medicago truncatula c... 46 0.008
gb|CA917684.1|CA917684 EST641831 GPOD Medicago truncatula c... 46 0.008
emb|CR334947.1| mte1-65K16FM1 BAC end, cultivar Jemalong A1... 44 0.030
gb|AW774276.1|AW774276 EST333427 KV3 Medicago truncatula cD... 44 0.030
gb|AW776547.1|AW776547 EST335612 DSIL Medicago truncatula c... 44 0.030
gb|AL379013.1|AL379013 MtBB41G12F1 MtBB Medicago truncatula... 44 0.030
gb|AL379014.1|AL379014 MtBB41G12R1 MtBB Medicago truncatula... 44 0.030
gb|BF005171.1|BF005171 EST433669 DSLC Medicago truncatula c... 44 0.030
gb|BF641893.1|BF641893 NF056A07IN1F1052 Insect herbivory Me... 44 0.030
gb|BF644540.1|BF644540 NF014H11EC1F1095 Elicited cell cultu... 44 0.030
gb|BG647823.1|BG647823 EST509442 HOGA Medicago truncatula c... 44 0.030
gb|AC140545.26| Medicago truncatula clone mth2-11g18, compl... 44 0.030
gb|BQ141177.1|BQ141177 NF016G11PH1F1088 Phoma-infected Medi... 42 0.12
>gb|AL365946.1|AL365946 MtBA03D01F1 MtBA Medicago truncatula cDNA clone MtBA03D01 T3, mRNA
sequence
Length = 477
Score = 97.6 bits (49), Expect = 2e-018
Identities = 262/333 (78%)
Strand = Plus / Plus
Query: 511 atgattggtcctgggacagggctggctccttttagaggcttcttgcaggaaaggttagca 570
||||| |||||||| || ||| |||||||||| ||||| |||||||||||||| |||||
Sbjct: 16 atgataggtcctggcactgggttggctcctttcagaggtttcttgcaggaaagattagct 75
Query: 571 ctgaaacaatctggagcagaactgggcacttcaatccttttctttggatgcaggaaccgt 630
||||| || ||||| || || ||| | || | | |||||||| ||||||||||||
Sbjct: 76 ttgaaagaagaaggagctgagctaggcccctctgttttattctttggttgcaggaaccgt 135
Query: 631 aatatggactacatatatgaagatgagttgcaaactttccttgaggagggggcgctttct 690
| ||||||| || || |||||||| ||| | |||| || | | || || ||||||
Sbjct: 136 caagtggactatatctacgaagatgaattgaaccatttcgttcatggtggcgcactttct 195
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||| |||||||| ||||| || || ||||| || || |||||||| || ||||| |||
Sbjct: 196 gagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacataaaatg 255
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
| || ||||| |||||||||||||||| || || | || | |||| | ||||| ||
Sbjct: 256 atagagaaggcttcagatatttggaacatgatatctcagggagcttacatttatgtgtgt 315
Query: 811 ggtgatgccaagggaatggctagagatgtacac 843
|||||||||||||| ||||||| ||||||||||
Sbjct: 316 ggtgatgccaagggtatggctaaagatgtacac 348
>gb|AW685470.1|AW685470 NF030B12NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF030B12NR 5', mRNA sequence
Length = 668
Score = 89.7 bits (45), Expect = 6e-016
Identities = 261/333 (78%)
Strand = Plus / Plus
Query: 511 atgattggtcctgggacagggctggctccttttagaggcttcttgcaggaaaggttagca 570
||||| |||||||| || ||| |||||||||| ||||| |||||||||||||| |||||
Sbjct: 203 atgataggtcctggcactgggttggctcctttcagaggtttcttgcaggaaagattagct 262
Query: 571 ctgaaacaatctggagcagaactgggcacttcaatccttttctttggatgcaggaaccgt 630
||||| || ||||| || || ||| | || | | |||||||| ||||||||||||
Sbjct: 263 ttgaaagaagaaggagctgagctaggcccctctgttttattctttggttgcaggaaccgt 322
Query: 631 aatatggactacatatatgaagatgagttgcaaactttccttgaggagggggcgctttct 690
| ||||||| || || |||||||| ||| | |||| || | | || || ||||||
Sbjct: 323 caagtggactatatctacgaagatgaattgaaccatttcgttcatggtggcgcactttct 382
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||| |||||||| ||||| || || ||||| || || |||||||| || ||||| |||
Sbjct: 383 gagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacataaaatg 442
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
| || ||||| |||||||||||||||| || || | || | |||| | ||||| ||
Sbjct: 443 atagagaaggcttcagatatttggaacatgatatctcagggagcttacatttatgtgtgt 502
Query: 811 ggtgatgccaagggaatggctagagatgtacac 843
|||||||||||||| ||||||| |||||||||
Sbjct: 503 ggtgatgccaagggtatggctaaggatgtacac 535
Score = 44.1 bits (22), Expect = 0.030
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 382 caaggagtttgttcaacatggatgaagaat 411
|||||||| |||||||| ||||||||||||
Sbjct: 74 caaggagtgtgttcaacttggatgaagaat 103
>gb|BF004731.1|BF004731 EST433229 KV1 Medicago truncatula cDNA clone pKV1-18O18, mRNA
sequence
Length = 640
Score = 89.7 bits (45), Expect = 6e-016
Identities = 261/333 (78%)
Strand = Plus / Plus
Query: 511 atgattggtcctgggacagggctggctccttttagaggcttcttgcaggaaaggttagca 570
||||| |||||||| || ||| |||||||||| ||||| |||||||||||||| |||||
Sbjct: 102 atgataggtcctggcactgggttggctcctttcagaggtttcttgcaggaaagattagct 161
Query: 571 ctgaaacaatctggagcagaactgggcacttcaatccttttctttggatgcaggaaccgt 630
||||| || ||||| || || ||| | || | | |||||||| ||||||||||||
Sbjct: 162 ttgaaagaagaaggagctgagctaggcccctctgttttattctttggttgcaggaaccgt 221
Query: 631 aatatggactacatatatgaagatgagttgcaaactttccttgaggagggggcgctttct 690
| ||||||| || || |||||||| ||| | |||| || | | || || ||||||
Sbjct: 222 caagtggactatatctacgaagatgaattgaaccatttcgttcatggtggcgcactttct 281
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||| |||||||| ||||| || || ||||| || || |||||||| || ||||| |||
Sbjct: 282 gagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacataaaatg 341
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
| || ||||| |||||||||||||||| || || | || | |||| | ||||| ||
Sbjct: 342 atagagaaggcttcagatatttggaacatgatatctcagggagcttacatttatgtgtgt 401
Query: 811 ggtgatgccaagggaatggctagagatgtacac 843
|||||||||||||| ||||||| |||||||||
Sbjct: 402 ggtgatgccaagggtatggctaaggatgtacac 434
>gb|BF004732.1|BF004732 EST433230 KV1 Medicago truncatula cDNA clone pKV1-18O18, mRNA
sequence
Length = 637
Score = 89.7 bits (45), Expect = 6e-016
Identities = 261/333 (78%)
Strand = Plus / Plus
Query: 511 atgattggtcctgggacagggctggctccttttagaggcttcttgcaggaaaggttagca 570
||||| |||||||| || ||| |||||||||| ||||| |||||||||||||| |||||
Sbjct: 94 atgataggtcctggcactgggttggctcctttcagaggtttcttgcaggaaagattagct 153
Query: 571 ctgaaacaatctggagcagaactgggcacttcaatccttttctttggatgcaggaaccgt 630
||||| || ||||| || || ||| | || | | |||||||| ||||||||||||
Sbjct: 154 ttgaaagaagaaggagctgagctaggcccctctgttttattctttggttgcaggaaccgt 213
Query: 631 aatatggactacatatatgaagatgagttgcaaactttccttgaggagggggcgctttct 690
| ||||||| || || |||||||| ||| | |||| || | | || || ||||||
Sbjct: 214 caagtggactatatctacgaagatgaattgaaccatttcgttcatggtggcgcactttct 273
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||| |||||||| ||||| || || ||||| || || |||||||| || ||||| |||
Sbjct: 274 gagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacataaaatg 333
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
| || ||||| |||||||||||||||| || || | || | |||| | ||||| ||
Sbjct: 334 atagagaaggcttcagatatttggaacatgatatctcagggagcttacatttatgtgtgt 393
Query: 811 ggtgatgccaagggaatggctagagatgtacac 843
|||||||||||||| ||||||| |||||||||
Sbjct: 394 ggtgatgccaagggtatggctaaggatgtacac 426
>gb|BG450144.1|BG450144 NF014G11DT1F1088 Drought Medicago truncatula cDNA clone NF014G11DT
5', mRNA sequence
Length = 680
Score = 89.7 bits (45), Expect = 6e-016
Identities = 261/333 (78%)
Strand = Plus / Plus
Query: 511 atgattggtcctgggacagggctggctccttttagaggcttcttgcaggaaaggttagca 570
||||| |||||||| || ||| |||||||||| ||||| |||||||||||||| |||||
Sbjct: 297 atgataggtcctggcactgggttggctcctttcagaggtttcttgcaggaaagattagct 356
Query: 571 ctgaaacaatctggagcagaactgggcacttcaatccttttctttggatgcaggaaccgt 630
||||| || ||||| || || ||| | || | | |||||||| ||||||||||||
Sbjct: 357 ttgaaagaagaaggagctgagctaggcccctctgttttattctttggttgcaggaaccgt 416
Query: 631 aatatggactacatatatgaagatgagttgcaaactttccttgaggagggggcgctttct 690
| ||||||| || || |||||||| ||| | |||| || | | || || ||||||
Sbjct: 417 caagtggactatatctacgaagatgaattgaaccatttcgttcatggtggcgcactttct 476
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||| |||||||| ||||| || || ||||| || || |||||||| || ||||| |||
Sbjct: 477 gagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacataaaatg 536
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
| || ||||| |||||||||||||||| || || | || | |||| | ||||| ||
Sbjct: 537 atagagaaggcttcagatatttggaacatgatatctcagggagcttacatttatgtgtgt 596
Query: 811 ggtgatgccaagggaatggctagagatgtacac 843
|||||||||||||| ||||||| |||||||||
Sbjct: 597 ggtgatgccaagggtatggctaaggatgtacac 629
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 265 gctcctcgtctgcaaccacgatactactcaatttcatcatctccaaagatggctccctcc 324
|||||||| || || ||| |||| || ||||||||||||||||||| |||| || |||
Sbjct: 51 gctcctcgcctacagccaagatattattcaatttcatcatctccaagagtggcaccatcc 110
Query: 325 agaattcatgt 335
|||||||||||
Sbjct: 111 agaattcatgt 121
Score = 44.1 bits (22), Expect = 0.030
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 382 caaggagtttgttcaacatggatgaagaat 411
|||||||| |||||||| ||||||||||||
Sbjct: 168 caaggagtgtgttcaacttggatgaagaat 197
>gb|BG450786.1|BG450786 NF093A10DT1F1071 Drought Medicago truncatula cDNA clone NF093A10DT
5', mRNA sequence
Length = 681
Score = 89.7 bits (45), Expect = 6e-016
Identities = 261/333 (78%)
Strand = Plus / Plus
Query: 511 atgattggtcctgggacagggctggctccttttagaggcttcttgcaggaaaggttagca 570
||||| |||||||| || ||| |||||||||| ||||| |||||||||||||| |||||
Sbjct: 315 atgataggtcctggcactgggttggctcctttcagaggtttcttgcaggaaagattagct 374
Query: 571 ctgaaacaatctggagcagaactgggcacttcaatccttttctttggatgcaggaaccgt 630
||||| || ||||| || || ||| | || | | |||||||| ||||||||||||
Sbjct: 375 ttgaaagaagaaggagctgagctaggcccctctgttttattctttggttgcaggaaccgt 434
Query: 631 aatatggactacatatatgaagatgagttgcaaactttccttgaggagggggcgctttct 690
| ||||||| || || |||||||| ||| | |||| || | | || || ||||||
Sbjct: 435 caagtggactatatctacgaagatgaattgaaccatttcgttcatggtggcgcactttct 494
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||| |||||||| ||||| || || ||||| || || |||||||| || ||||| |||
Sbjct: 495 gagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacataaaatg 554
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
| || ||||| |||||||||||||||| || || | || | |||| | ||||| ||
Sbjct: 555 atagagaaggcttcagatatttggaacatgatatctcagggagcttacatttatgtgtgt 614
Query: 811 ggtgatgccaagggaatggctagagatgtacac 843
|||||||||||||| ||||||| |||||||||
Sbjct: 615 ggtgatgccaagggtatggctaaggatgtacac 647
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 265 gctcctcgtctgcaaccacgatactactcaatttcatcatctccaaagatggctccctcc 324
|||||||| || || ||| |||| || ||||||||||||||||||| |||| || |||
Sbjct: 69 gctcctcgcctacagccaagatattattcaatttcatcatctccaagagtggcaccatcc 128
Query: 325 agaattcatgt 335
|||||||||||
Sbjct: 129 agaattcatgt 139
Score = 44.1 bits (22), Expect = 0.030
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 382 caaggagtttgttcaacatggatgaagaat 411
|||||||| |||||||| ||||||||||||
Sbjct: 186 caaggagtgtgttcaacttggatgaagaat 215
>gb|BG451984.1|BG451984 NF043B09DT1F1074 Drought Medicago truncatula cDNA clone NF043B09DT
5', mRNA sequence
Length = 670
Score = 87.7 bits (44), Expect = 2e-015
Identities = 208/260 (80%), Gaps = 2/260 (0%)
Strand = Plus / Plus
Query: 77 ctgctttgcttgctttagcttctcatgcatctgatccagctgaagctgaacgacttag-g 135
|||| |||||||| |||||| ||||||||||||||||| ||||||| || ||||| ||
Sbjct: 265 ctgccttgcttgccttagctgctcatgcatctgatccatctgaagcggatcgactaagac 324
Query: 136 ttcttggcctctcctgctggaaaggatgagtattctcaatggataactgctagtcagagg 195
|||| ||||| ||||||||||||||||||||| | | ||| | | ||| ||| ||
Sbjct: 325 atctt-gcctcacctgctggaaaggatgagtatgcagagtgggtgattgcctctcaaaga 383
Query: 196 agtcttcttgaagttatggctgcattcccttcagctaagccaccactgggagtgtttttc 255
||||| ||||| |||||||||| ||| | ||||| || || ||| | || || |||||
Sbjct: 384 agtctccttgaggttatggctgaattttcatcagccaaacctccaattggtgtctttttt 443
Query: 256 gcagcaatagctcctcgtctgcaaccacgatactactcaatttcatcatctccaaagatg 315
||| || | |||||||| || || ||| |||| || ||||||||||||||||||| ||
Sbjct: 444 gcatcagttgctcctcgcctacagccaagatattattcaatttcatcatctccaagagtg 503
Query: 316 gctccctccagaattcatgt 335
|| || ||||||||||||||
Sbjct: 504 gcaccatccagaattcatgt 523
>gb|BF003783.1|BF003783 EST432281 KV1 Medicago truncatula cDNA clone pKV1-13L19, mRNA
sequence
Length = 487
Score = 85.7 bits (43), Expect = 9e-015
Identities = 204/255 (80%), Gaps = 2/255 (0%)
Strand = Plus / Plus
Query: 82 ttgcttgctttagcttctcatgcatctgatccagctgaagctgaacgacttag-gttctt 140
|||||||| |||||| ||||||||||||||||| ||||||| || ||||| || ||||
Sbjct: 5 ttgcttgccttagctgctcatgcatctgatccatctgaagcggatcgactaagacatctt 64
Query: 141 ggcctctcctgctggaaaggatgagtattctcaatggataactgctagtcagaggagtct 200
||||| ||||||||||||||||||||| | | ||| | | ||| ||| || |||||
Sbjct: 65 -gcctcacctgctggaaaggatgagtatgcagagtgggtgattgcctctcaaagaagtct 123
Query: 201 tcttgaagttatggctgcattcccttcagctaagccaccactgggagtgtttttcgcagc 260
||||| |||||||||| ||| | ||||| || || ||| | || || ||||| ||| |
Sbjct: 124 ccttgaggttatggctgaattttcatcagccaaacctccaattggtgtcttttttgcatc 183
Query: 261 aatagctcctcgtctgcaaccacgatactactcaatttcatcatctccaaagatggctcc 320
| | |||||||| || || ||| |||| || ||||||||||||||||||| |||| ||
Sbjct: 184 agttgctcctcgcctacagccaagatattattcaatttcatcatctccaagagtggcacc 243
Query: 321 ctccagaattcatgt 335
||||||||||||||
Sbjct: 244 atccagaattcatgt 258
Score = 58.0 bits (29), Expect = 2e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 511 atgattggtcctgggacagggctggctccttttagaggcttcttgcaggaaag 563
||||| |||||||| || ||| |||||||||| ||||| ||||||||||||||
Sbjct: 434 atgataggtcctggcactgggttggctcctttcagaggtttcttgcaggaaag 486
Score = 44.1 bits (22), Expect = 0.030
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 382 caaggagtttgttcaacatggatgaagaat 411
|||||||| |||||||| ||||||||||||
Sbjct: 305 caaggagtgtgttcaacttggatgaagaat 334
>gb|BE203172.1|BE203172 EST403194 KV1 Medicago truncatula cDNA clone pKV1-4N11, mRNA
sequence
Length = 456
Score = 77.8 bits (39), Expect = 2e-012
Identities = 129/159 (81%)
Strand = Plus / Plus
Query: 685 ctttctgagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcat 744
||||||||||| |||||||| ||||| || || ||||| || || |||||||| || |||
Sbjct: 215 ctttctgagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacat 274
Query: 745 aagatggtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatat 804
|| ||| | || ||||| |||||||||||||||| || || | || | |||| | |||
Sbjct: 275 aaaatgatagagaaggcttcagatatttggaacatgatatctcagggagcttacatttat 334
Query: 805 gtttgcggtgatgccaagggaatggctagagatgtacac 843
|| || |||||||||||||| ||||||| |||||||||
Sbjct: 335 gtgtgtggtgatgccaagggtatggctaaggatgtacac 373
>gb|BF631848.1|BF631848 NF025B07DT1F1058 Drought Medicago truncatula cDNA clone NF025B07DT
5', mRNA sequence
Length = 521
Score = 77.8 bits (39), Expect = 2e-012
Identities = 129/159 (81%)
Strand = Plus / Plus
Query: 685 ctttctgagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcat 744
||||||||||| |||||||| ||||| || || ||||| || || |||||||| || |||
Sbjct: 160 ctttctgagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacat 219
Query: 745 aagatggtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatat 804
|| ||| | || ||||| |||||||||||||||| || || | || | |||| | |||
Sbjct: 220 aaaatgatagagaaggcttcagatatttggaacatgatatctcagggagcttacatttat 279
Query: 805 gtttgcggtgatgccaagggaatggctagagatgtacac 843
|| || |||||||||||||| ||||||| |||||||||
Sbjct: 280 gtgtgtggtgatgccaagggtatggctaaggatgtacac 318
Score = 50.1 bits (25), Expect = 5e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 533 tggctccttttagaggcttcttgcaggaaaggttagc 569
|||||||||| ||||| |||||||||||||| |||||
Sbjct: 7 tggctcctttcagaggtttcttgcaggaaagattagc 43
>gb|BI268920.1|BI268920 NF041F11DT1F1094 Drought Medicago truncatula cDNA clone NF041F11DT
5', mRNA sequence
Length = 594
Score = 77.8 bits (39), Expect = 2e-012
Identities = 129/159 (81%)
Strand = Plus / Plus
Query: 685 ctttctgagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcat 744
||||||||||| |||||||| ||||| || || ||||| || || |||||||| || |||
Sbjct: 150 ctttctgagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacat 209
Query: 745 aagatggtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatat 804
|| ||| | || ||||| |||||||||||||||| || || | || | |||| | |||
Sbjct: 210 aaaatgatagagaaggcttcagatatttggaacatgatatctcagggagcttacatttat 269
Query: 805 gtttgcggtgatgccaagggaatggctagagatgtacac 843
|| || |||||||||||||| ||||||| |||||||||
Sbjct: 270 gtgtgtggtgatgccaagggtatggctaaggatgtacac 308
>gb|CX523183.1|CX523183 s13dNF80F06VI059_472170 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 551
Score = 77.8 bits (39), Expect = 2e-012
Identities = 129/159 (81%)
Strand = Plus / Plus
Query: 685 ctttctgagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcat 744
||||||||||| |||||||| ||||| || || ||||| || || |||||||| || |||
Sbjct: 30 ctttctgagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacat 89
Query: 745 aagatggtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatat 804
|| ||| | || ||||| |||||||||||||||| || || | || | |||| | |||
Sbjct: 90 aaaatgatagagaaggcttcagatatttggaacatgatatctcagggagcttacatttat 149
Query: 805 gtttgcggtgatgccaagggaatggctagagatgtacac 843
|| || |||||||||||||| ||||||| |||||||||
Sbjct: 150 gtgtgtggtgatgccaagggtatggctaaggatgtacac 188
>gb|CX523553.1|CX523553 s13dNF84G11VI088_474826 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 552
Score = 77.8 bits (39), Expect = 2e-012
Identities = 129/159 (81%)
Strand = Plus / Plus
Query: 685 ctttctgagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcat 744
||||||||||| |||||||| ||||| || || ||||| || || |||||||| || |||
Sbjct: 30 ctttctgagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacat 89
Query: 745 aagatggtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatat 804
|| ||| | || ||||| |||||||||||||||| || || | || | |||| | |||
Sbjct: 90 aaaatgatagagaaggcttcagatatttggaacatgatatctcagggagcttacatttat 149
Query: 805 gtttgcggtgatgccaagggaatggctagagatgtacac 843
|| || |||||||||||||| ||||||| |||||||||
Sbjct: 150 gtgtgtggtgatgccaagggtatggctaaggatgtacac 188
>gb|BF635422.1|BF635422 NF068E02DT1F1018 Drought Medicago truncatula cDNA clone NF068E02DT
5', mRNA sequence
Length = 678
Score = 73.8 bits (37), Expect = 3e-011
Identities = 81/93 (87%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 77 ctgctttgcttgctttagcttctcatgcatctgatccagctgaagctgaacgacttag-g 135
|||| |||||||| |||||| ||||||||||||||||| ||||||| || ||||| ||
Sbjct: 383 ctgccttgcttgccttagctgctcatgcatctgatccatctgaagcggatcgactaagac 442
Query: 136 ttcttggcctctcctgctggaaaggatgagtat 168
|||| ||||| |||||||||||||||||||||
Sbjct: 443 atctt-gcctcacctgctggaaaggatgagtat 474
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 265 gctcctcgtctgcaaccacgatactactcaatttcatcatctccaaagatggctccctcc 324
|||||||| || || ||| |||| || ||||||||||||||||||| |||| || |||
Sbjct: 572 gctcctcgcctacagccaagatattattcaatttcatcatctccaagagtggcaccatcc 631
Query: 325 agaattcatgt 335
|||||||||||
Sbjct: 632 agaattcatgt 642
>gb|BG447798.1|BG447798 NF069H04EC1F1041 Elicited cell culture Medicago truncatula cDNA
clone NF069H04EC 5', mRNA sequence
Length = 635
Score = 73.8 bits (37), Expect = 3e-011
Identities = 81/93 (87%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 77 ctgctttgcttgctttagcttctcatgcatctgatccagctgaagctgaacgacttag-g 135
|||| |||||||| |||||| ||||||||||||||||| ||||||| || ||||| ||
Sbjct: 84 ctgccttgcttgccttagctgctcatgcatctgatccatctgaagcggatcgactaagac 143
Query: 136 ttcttggcctctcctgctggaaaggatgagtat 168
|||| ||||| |||||||||||||||||||||
Sbjct: 144 atctt-gcctcacctgctggaaaggatgagtat 175
Score = 58.0 bits (29), Expect = 2e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 511 atgattggtcctgggacagggctggctccttttagaggcttcttgcaggaaag 563
||||| |||||||| || ||| |||||||||| ||||| ||||||||||||||
Sbjct: 519 atgataggtcctggcactgggttggctcctttcagaggtttcttgcaggaaag 571
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 265 gctcctcgtctgcaaccacgatactactcaatttcatcatctccaaagatggctccctcc 324
|||||||| || || ||| |||| || ||||||||||||||||||| |||| || |||
Sbjct: 273 gctcctcgcctacagccaagatattattcaatttcatcatctccaagagtggcaccatcc 332
Query: 325 agaattcatgt 335
|||||||||||
Sbjct: 333 agaattcatgt 343
Score = 44.1 bits (22), Expect = 0.030
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 382 caaggagtttgttcaacatggatgaagaat 411
|||||||| |||||||| ||||||||||||
Sbjct: 390 caaggagtgtgttcaacttggatgaagaat 419
>gb|BG447832.1|BG447832 NF103G06EC1F1050 Elicited cell culture Medicago truncatula cDNA
clone NF103G06EC 5', mRNA sequence
Length = 659
Score = 73.8 bits (37), Expect = 3e-011
Identities = 81/93 (87%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 77 ctgctttgcttgctttagcttctcatgcatctgatccagctgaagctgaacgacttag-g 135
|||| |||||||| |||||| ||||||||||||||||| ||||||| || ||||| ||
Sbjct: 550 ctgccttgcttgccttagctgctcatgcatctgatccatctgaagcggatcgactaagac 609
Query: 136 ttcttggcctctcctgctggaaaggatgagtat 168
|||| ||||| |||||||||||||||||||||
Sbjct: 610 atctt-gcctcacctgctggaaaggatgagtat 641
>gb|CB891792.1|CB891792 EST648761 KV3 Medicago truncatula cDNA clone KV3-52I3, mRNA
sequence
Length = 498
Score = 73.8 bits (37), Expect = 3e-011
Identities = 186/233 (79%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 77 ctgctttgcttgctttagcttctcatgcatctgatccagctgaagctgaacgacttaggt 136
|||| |||||||| |||||| ||||||||||||||||| ||||||| || ||||| ||
Sbjct: 267 ctgccttgcttgccttagctgctcatgcatctgatccatctgaagcggatcgactaagac 326
Query: 137 -tcttggcctctcctgctggaaaggatgagtattctcaatggataactgctagtcagagg 195
||||| |||| ||||||||||||||||||||| | | ||| | | ||| ||| ||
Sbjct: 327 atcttg-cctcacctgctggaaaggatgagtatgcagagtgggtgattgcctctcaaaga 385
Query: 196 agtcttcttgaagttatggctgcattcccttcagctaagccaccactgggagtgtttttc 255
||||| ||||| |||||||||| ||| | ||||| || || ||| | || || |||||
Sbjct: 386 agtctccttgaggttatggctgaattttcatcagccaaacctccaattggtgtctttttt 445
Query: 256 gcagcaatagctcctcgtctgcaaccacgatactactcaatttcatcatctcc 308
||| || | |||||||| || || ||| |||| || |||||||||||||||||
Sbjct: 446 gcatcagttgctcctcgcctacagccaagatattattcaatttcatcatctcc 498
>gb|CX528309.1|CX528309 s13dNF54A07AT053_517130 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 605
Score = 73.8 bits (37), Expect = 3e-011
Identities = 211/269 (78%)
Strand = Plus / Plus
Query: 511 atgattggtcctgggacagggctggctccttttagaggcttcttgcaggaaaggttagca 570
||||| |||||||| || ||| |||||||||| ||||| |||||||||||||| |||||
Sbjct: 329 atgataggtcctggcactgggttggctcctttcagaggtttcttgcaggaaagattagct 388
Query: 571 ctgaaacaatctggagcagaactgggcacttcaatccttttctttggatgcaggaaccgt 630
||||| || ||||| || || ||| | || | | |||||||| ||||||||||||
Sbjct: 389 ttgaaagaagaaggagctgagctaggcccctctgttttattctttggttgcaggaaccgt 448
Query: 631 aatatggactacatatatgaagatgagttgcaaactttccttgaggagggggcgctttct 690
| ||||||| || || |||||||| ||| | |||| || | | || || ||||||
Sbjct: 449 caagtggactatatctacgaagatgaattgaaccatttcgttcatggtggcgcactttct 508
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||| |||||||| ||||| || || ||||| || || |||||||| || ||||| |||
Sbjct: 509 gagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacataaaatg 568
Query: 751 gtggaaaaggccacagatatttggaacat 779
| || ||||| ||||||||||||||||
Sbjct: 569 atagagaaggcttcagatatttggaacat 597
Score = 56.0 bits (28), Expect = 8e-006
Identities = 112/140 (80%)
Strand = Plus / Plus
Query: 196 agtcttcttgaagttatggctgcattcccttcagctaagccaccactgggagtgtttttc 255
||||| ||||| |||||||||| ||| | ||||| || || ||| | || || |||||
Sbjct: 14 agtctccttgaggttatggctgaattttcatcagccaaacctccaattggtgtctttttt 73
Query: 256 gcagcaatagctcctcgtctgcaaccacgatactactcaatttcatcatctccaaagatg 315
||| || | |||||||| || || ||| |||| || ||||||||||||||||||| ||
Sbjct: 74 gcatcagttgctcctcgcctacagccaagatattattcaatttcatcatctccaagagtg 133
Query: 316 gctccctccagaattcatgt 335
|| || ||||||||||||||
Sbjct: 134 gcaccatccagaattcatgt 153
Score = 44.1 bits (22), Expect = 0.030
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 382 caaggagtttgttcaacatggatgaagaat 411
|||||||| |||||||| ||||||||||||
Sbjct: 200 caaggagtgtgttcaacttggatgaagaat 229
>gb|BG452152.1|BG452152 NF085F04LF1F1043 Developing leaf Medicago truncatula cDNA clone
NF085F04LF 5', mRNA sequence
Length = 656
Score = 61.9 bits (31), Expect = 1e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 511 atgattggtcctgggacagggctggctccttttagaggcttcttgcaggaaaggttagc 569
||||| |||||||| || ||| |||||||||| ||||| |||||||||||||| |||||
Sbjct: 315 atgataggtcctggcactgggttggctcctttcagaggtttcttgcaggaaagattagc 373
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 265 gctcctcgtctgcaaccacgatactactcaatttcatcatctccaaagatggctccctcc 324
|||||||| || || ||| |||| || ||||||||||||||||||| |||| || |||
Sbjct: 69 gctcctcgcctacagccaagatattattcaatttcatcatctccaagagtggcaccatcc 128
Query: 325 agaattcatgt 335
|||||||||||
Sbjct: 129 agaattcatgt 139
Score = 44.1 bits (22), Expect = 0.030
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 382 caaggagtttgttcaacatggatgaagaat 411
|||||||| |||||||| ||||||||||||
Sbjct: 186 caaggagtgtgttcaacttggatgaagaat 215
>gb|CX526853.1|CX526853 s13dNF27D02AT026_514218 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 585
Score = 61.9 bits (31), Expect = 1e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 511 atgattggtcctgggacagggctggctccttttagaggcttcttgcaggaaaggttagc 569
||||| |||||||| || ||| |||||||||| ||||| |||||||||||||| |||||
Sbjct: 344 atgataggtcctggcactgggttggctcctttcagaggtttcttgcaggaaagattagc 402
>gb|AC135801.24| Medicago truncatula clone mth2-23o16, complete sequence
Length = 115452
Score = 61.9 bits (31), Expect = 1e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 77 ctgctttgcttgctttagcttctcatgcatctgatccagctgaagctgaacgact 131
|||| |||||||| |||||| ||||||||||||||||| ||||||| || |||||
Sbjct: 55386 ctgccttgcttgccttagctgctcatgcatctgatccatctgaagcggatcgact 55332
Score = 48.1 bits (24), Expect = 0.002
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 764 cagatatttggaacatcatctcaaatggtggttacttatatgtttgcggtgatgccaagg 823
|||||||||||||||| || || | || | |||| | ||||| || |||||||||||||
Sbjct: 53702 cagatatttggaacatgatatctcagggagcttacatttatgtgtgtggtgatgccaagg 53643
Query: 824 gaatggctagagatgtacac 843
| ||||||| |||||||||
Sbjct: 53642 gtatggctaaggatgtacac 53623
Score = 46.1 bits (23), Expect = 0.008
Identities = 92/115 (80%)
Strand = Plus / Minus
Query: 196 agtcttcttgaagttatggctgcattcccttcagctaagccaccactgggagtgtttttc 255
||||| ||||| |||||||||| ||| | ||||| || || ||| | || || |||||
Sbjct: 55182 agtctccttgaggttatggctgaattttcatcagccaaacctccaattggtgtctttttt 55123
Query: 256 gcagcaatagctcctcgtctgcaaccacgatactactcaatttcatcatctccaa 310
||| || | |||||||| || || ||| |||| || |||||||||||||||||||
Sbjct: 55122 gcatcagttgctcctcgcctacagccaagatattattcaatttcatcatctccaa 55068
Score = 44.1 bits (22), Expect = 0.030
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 685 ctttctgagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcat 744
||||||||||| |||||||| ||||| || || ||||| || || |||||||| || |||
Sbjct: 53863 ctttctgagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacat 53804
Query: 745 aa 746
||
Sbjct: 53803 aa 53802
>gb|BE315703.2|BE315703 NF025B11LF1F1089 Developing leaf Medicago truncatula cDNA clone
NF025B11LF 5', mRNA sequence
Length = 583
Score = 48.1 bits (24), Expect = 0.002
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 764 cagatatttggaacatcatctcaaatggtggttacttatatgtttgcggtgatgccaagg 823
|||||||||||||||| || || | || | |||| | ||||| || |||||||||||||
Sbjct: 579 cagatatttggaacatgatatctcagggagcttacatttatgtgtgtggtgatgccaagg 520
Query: 824 gaatggctagagatgtacac 843
| ||||||| |||||||||
Sbjct: 519 gtatggctaaggatgtacac 500
>emb|CR324769.1| mte1-52E15FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 722
Score = 46.1 bits (23), Expect = 0.008
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 442 agctgggctcccatatttgtgaggcagtcaaatttcaagttacctgctgacccatccact 501
|||||||||||||| ||| | |||| || ||||||||| |||||||||| || || | |
Sbjct: 247 agctgggctcccatttttatcaggccatcgaatttcaagctacctgctgatccttcaatt 306
Query: 502 ccgattatcatgattggtcctgg 524
|| ||||| ||| |||| |||||
Sbjct: 307 cctattattatggttggacctgg 329
>emb|CR333348.1| mte1-63M15RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 624
Score = 46.1 bits (23), Expect = 0.008
Identities = 92/115 (80%)
Strand = Plus / Minus
Query: 196 agtcttcttgaagttatggctgcattcccttcagctaagccaccactgggagtgtttttc 255
||||| ||||| |||||||||| ||| | ||||| || || ||| | || || |||||
Sbjct: 534 agtctccttgaggttatggctgaattttcatcagccaaacctccaattggtgtctttttt 475
Query: 256 gcagcaatagctcctcgtctgcaaccacgatactactcaatttcatcatctccaa 310
||| || | |||||||| || || ||| |||| || |||||||||||||||||||
Sbjct: 474 gcatcagttgctcctcgcctacagccaagatattattcaatttcatcatctccaa 420
>emb|CR340585.1| mte1-72F21RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 602
Score = 46.1 bits (23), Expect = 0.008
Identities = 92/115 (80%)
Strand = Plus / Minus
Query: 196 agtcttcttgaagttatggctgcattcccttcagctaagccaccactgggagtgtttttc 255
||||| ||||| |||||||||| ||| | ||||| || || ||| | || || |||||
Sbjct: 534 agtctccttgaggttatggctgaattttcatcagccaaacctccaattggtgtctttttt 475
Query: 256 gcagcaatagctcctcgtctgcaaccacgatactactcaatttcatcatctccaa 310
||| || | |||||||| || || ||| |||| || |||||||||||||||||||
Sbjct: 474 gcatcagttgctcctcgcctacagccaagatattattcaatttcatcatctccaa 420
>emb|CR311894.1| mte1-34A4RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 588
Score = 46.1 bits (23), Expect = 0.008
Identities = 89/111 (80%)
Strand = Plus / Minus
Query: 198 tcttcttgaagttatggctgcattcccttcagctaagccaccactgggagtgtttttcgc 257
||||||||| || ||||||| || || ||||| || ||||| || || |||||||| ||
Sbjct: 265 tcttcttgaggtgatggctgattttccatcagcaaaaccaccccttggtgtgttttttgc 206
Query: 258 agcaatagctcctcgtctgcaaccacgatactactcaatttcatcatctcc 308
|| ||||| |||||| | ||||| || || || || ||||||||||||||
Sbjct: 205 tgccatagcccctcgtttacaacctcgttattattctatttcatcatctcc 155
>gb|BF003997.1|BF003997 EST432486 KV1 Medicago truncatula cDNA clone pKV1-14C12, mRNA
sequence
Length = 775
Score = 46.1 bits (23), Expect = 0.008
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 442 agctgggctcccatatttgtgaggcagtcaaatttcaagttacctgctgacccatccact 501
|||||||||||||| ||| | |||| || ||||||||| |||||||||| || || | |
Sbjct: 309 agctgggctcccatttttatcaggccatcgaatttcaagctacctgctgatccttcaatt 368
Query: 502 ccgattatcatgattggtcctgg 524
|| ||||| ||| |||| |||||
Sbjct: 369 cctattattatggttggacctgg 391
Score = 46.1 bits (23), Expect = 0.008
Identities = 89/111 (80%)
Strand = Plus / Plus
Query: 198 tcttcttgaagttatggctgcattcccttcagctaagccaccactgggagtgtttttcgc 257
||||||||| || ||||||| || || ||||| || ||||| || || |||||||| ||
Sbjct: 65 tcttcttgaggtgatggctgattttccatcagcaaaaccaccccttggtgtgttttttgc 124
Query: 258 agcaatagctcctcgtctgcaaccacgatactactcaatttcatcatctcc 308
|| ||||| |||||| | ||||| || || || || ||||||||||||||
Sbjct: 125 tgccatagcccctcgtttacaacctcgttattattctatttcatcatctcc 175
Score = 44.1 bits (22), Expect = 0.030
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 802 tatgtttgcggtgatgccaagggaatggctagagatgt 839
||||| || |||||||||||||| ||||| ||||||||
Sbjct: 669 tatgtatgtggtgatgccaagggcatggccagagatgt 706
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 383 aaggagtttgttcaacatggatgaagaat 411
||||||| |||||||| ||||||||||||
Sbjct: 250 aaggagtatgttcaacctggatgaagaat 278
>gb|BG645950.1|BG645950 EST507569 KV3 Medicago truncatula cDNA clone pKV3-48E5 5' end, mRNA
sequence
Length = 626
Score = 46.1 bits (23), Expect = 0.008
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 442 agctgggctcccatatttgtgaggcagtcaaatttcaagttacctgctgacccatccact 501
|||||||||||||| ||| | |||| || ||||||||| |||||||||| || || | |
Sbjct: 187 agctgggctcccatttttatcaggccatcgaatttcaagctacctgctgatccttcaatt 246
Query: 502 ccgattatcatgattggtcctgg 524
|| ||||| ||| |||| |||||
Sbjct: 247 cctattattatggttggacctgg 269
Score = 44.1 bits (22), Expect = 0.030
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 802 tatgtttgcggtgatgccaagggaatggctagagatgt 839
||||| || |||||||||||||| ||||| ||||||||
Sbjct: 547 tatgtatgtggtgatgccaagggcatggccagagatgt 584
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 383 aaggagtttgttcaacatggatgaagaat 411
||||||| |||||||| ||||||||||||
Sbjct: 128 aaggagtatgttcaacctggatgaagaat 156
>gb|BI308367.1|BI308367 EST529777 GPOD Medicago truncatula cDNA clone pGPOD-2L4 5' end,
mRNA sequence
Length = 584
Score = 46.1 bits (23), Expect = 0.008
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 442 agctgggctcccatatttgtgaggcagtcaaatttcaagttacctgctgacccatccact 501
|||||||||||||| ||| | |||| || ||||||||| |||||||||| || || | |
Sbjct: 312 agctgggctcccatttttatcaggccatcgaatttcaagctacctgctgatccttcaatt 371
Query: 502 ccgattatcatgattggtcctgg 524
|| ||||| ||| |||| |||||
Sbjct: 372 cctattattatggttggacctgg 394
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 383 aaggagtttgttcaacatggatgaagaat 411
||||||| |||||||| ||||||||||||
Sbjct: 253 aaggagtatgttcaacctggatgaagaat 281
Score = 42.1 bits (21), Expect = 0.12
Identities = 72/89 (80%)
Strand = Plus / Plus
Query: 220 ttcccttcagctaagccaccactgggagtgtttttcgcagcaatagctcctcgtctgcaa 279
|||| |||||| || ||||| || || |||||||| || || ||||| |||||| | |||
Sbjct: 90 ttccattcagcaaaaccaccccttggtgtgttttttgctgccatagcccctcgtttacaa 149
Query: 280 ccacgatactactcaatttcatcatctcc 308
|| || || || || ||||||||||||||
Sbjct: 150 cctcgttattattctatttcatcatctcc 178
>gb|CA917684.1|CA917684 EST641831 GPOD Medicago truncatula cDNA clone GPOD-36P12, mRNA
sequence
Length = 705
Score = 46.1 bits (23), Expect = 0.008
Identities = 92/115 (80%)
Strand = Plus / Plus
Query: 196 agtcttcttgaagttatggctgcattcccttcagctaagccaccactgggagtgtttttc 255
||||| ||||| |||||||||| ||| | ||||| || || ||| | || || |||||
Sbjct: 189 agtctccttgaggttatggctgaattttcatcagccaaacctccaattggtgtctttttt 248
Query: 256 gcagcaatagctcctcgtctgcaaccacgatactactcaatttcatcatctccaa 310
||| || | |||||||| || || ||| |||| || |||||||||||||||||||
Sbjct: 249 gcatcagttgctcctcgcctacagccaagatattattcaatttcatcatctccaa 303
Score = 46.1 bits (23), Expect = 0.008
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 93 agcttctcatgcatctgatccagctgaagctgaacgact 131
|||| ||||||||||||||||| ||||||| || |||||
Sbjct: 1 agctgctcatgcatctgatccatctgaagcggatcgact 39
>emb|CR334947.1| mte1-65K16FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 724
Score = 44.1 bits (22), Expect = 0.030
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 685 ctttctgagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcat 744
||||||||||| |||||||| ||||| || || ||||| || || |||||||| || |||
Sbjct: 491 ctttctgagctcattgttgccttctcacgagaggggcctactaaggaatatgtccaacat 550
Query: 745 aa 746
||
Sbjct: 551 aa 552
Score = 42.1 bits (21), Expect = 0.12
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 764 cagatatttggaacatcatctcaaatggtggttacttatatgtttgcggtgatgccaagg 823
|||||||||||||||| || || | || | |||| | ||||| || |||||||||||||
Sbjct: 652 cagatatttggaacatgatatctcagggagcttacatttatgtgtgtggtgatgccaagg 711
Query: 824 gaatggcta 832
| |||||||
Sbjct: 712 gtatggcta 720
>gb|AW774276.1|AW774276 EST333427 KV3 Medicago truncatula cDNA clone pKV3-22I7, mRNA
sequence
Length = 578
Score = 44.1 bits (22), Expect = 0.030
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 802 tatgtttgcggtgatgccaagggaatggctagagatgt 839
||||| || |||||||||||||| ||||| ||||||||
Sbjct: 500 tatgtatgtggtgatgccaagggcatggccagagatgt 463
>gb|AW776547.1|AW776547 EST335612 DSIL Medicago truncatula cDNA clone pDSIL-8O21, mRNA
sequence
Length = 373
Score = 44.1 bits (22), Expect = 0.030
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 382 caaggagtttgttcaacatggatgaagaat 411
|||||||| |||||||| ||||||||||||
Sbjct: 93 caaggagtgtgttcaacttggatgaagaat 122
Score = 40.1 bits (20), Expect = 0.47
Identities = 39/44 (88%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 293 caatttcatcatctccaaaga-tggctccctccagaattcatgt 335
|||||||||||||||||| | |||| || ||||||||||||||
Sbjct: 3 caatttcatcatctccaagcagtggcaccatccagaattcatgt 46
>gb|AL379013.1|AL379013 MtBB41G12F1 MtBB Medicago truncatula cDNA clone MtBB41G12 T3, mRNA
sequence
Length = 454
Score = 44.1 bits (22), Expect = 0.030
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 802 tatgtttgcggtgatgccaagggaatggctagagatgt 839
||||| || |||||||||||||| ||||| ||||||||
Sbjct: 218 tatgtatgtggtgatgccaagggcatggccagagatgt 255
>gb|AL379014.1|AL379014 MtBB41G12R1 MtBB Medicago truncatula cDNA clone MtBB41G12 T7, mRNA
sequence
Length = 527
Score = 44.1 bits (22), Expect = 0.030
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 802 tatgtttgcggtgatgccaagggaatggctagagatgt 839
||||| || |||||||||||||| ||||| ||||||||
Sbjct: 223 tatgtatgtggtgatgccaagggcatggccagagatgt 260
>gb|BF005171.1|BF005171 EST433669 DSLC Medicago truncatula cDNA clone pDSLC-31H13, mRNA
sequence
Length = 449
Score = 44.1 bits (22), Expect = 0.030
Identities = 88/110 (80%)
Strand = Plus / Plus
Query: 198 tcttcttgaagttatggctgcattcccttcagctaagccaccactgggagtgtttttcgc 257
||||||||| || ||||||| || || ||||| || ||||| || || |||||||| ||
Sbjct: 340 tcttcttgaggtgatggctgattttccatcagcaaaaccaccccttggtgtgttttttgc 399
Query: 258 agcaatagctcctcgtctgcaaccacgatactactcaatttcatcatctc 307
|| ||||| |||||| | ||||| || || || || |||||||||||||
Sbjct: 400 tgccatagcccctcgtttacaacctcgttattattctatttcatcatctc 449
>gb|BF641893.1|BF641893 NF056A07IN1F1052 Insect herbivory Medicago truncatula cDNA clone
NF056A07IN 5', mRNA sequence
Length = 492
Score = 44.1 bits (22), Expect = 0.030
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 802 tatgtttgcggtgatgccaagggaatggctagagatgt 839
||||| || |||||||||||||| ||||| ||||||||
Sbjct: 394 tatgtatgtggtgatgccaagggcatggccagagatgt 431
>gb|BF644540.1|BF644540 NF014H11EC1F1095 Elicited cell culture Medicago truncatula cDNA
clone NF014H11EC 5', mRNA sequence
Length = 565
Score = 44.1 bits (22), Expect = 0.030
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 802 tatgtttgcggtgatgccaagggaatggctagagatgtacac 843
||||| || |||||||||||||| ||||||| |||||||||
Sbjct: 18 tatgtgtgtggtgatgccaagggtatggctaaggatgtacac 59
>gb|BG647823.1|BG647823 EST509442 HOGA Medicago truncatula cDNA clone pHOGA-18C1 5' end,
mRNA sequence
Length = 745
Score = 44.1 bits (22), Expect = 0.030
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 802 tatgtttgcggtgatgccaagggaatggctagagatgt 839
||||| || |||||||||||||| ||||| ||||||||
Sbjct: 498 tatgtatgtggtgatgccaagggcatggccagagatgt 461
>gb|AC140545.26| Medicago truncatula clone mth2-11g18, complete sequence
Length = 129414
Score = 44.1 bits (22), Expect = 0.030
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 78 tgctttgcttgctttagcttctcatg 103
||||||| ||||||||||||||||||
Sbjct: 87059 tgctttgattgctttagcttctcatg 87034
>gb|BQ141177.1|BQ141177 NF016G11PH1F1088 Phoma-infected Medicago truncatula cDNA clone
NF016G11PH 5', mRNA sequence
Length = 666
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 99 tcatgcatctgatccagctgaagctgaacgact 131
|||||||||||||||| ||||||| || |||||
Sbjct: 578 tcatgcatctgatccatctgaagcggatcgact 610
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 373,239
Number of Sequences: 392609
Number of extensions: 373239
Number of successful extensions: 28952
Number of sequences better than 0.5: 41
Number of HSP's better than 0.5 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28794
Number of HSP's gapped (non-prelim): 143
length of query: 1340
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1320
effective length of database: 433,880,813
effective search space: 572722673160
effective search space used: 572722673160
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)