BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804958.2.1
(1118 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE204926.1|BE204926 EST397546 KV0 Medicago truncatula cD... 105 8e-021
gb|AL385609.1|AL385609 MtBC29E08F1 MtBC Medicago truncatula... 105 8e-021
gb|AL388861.1|AL388861 MtBC51C02F1 MtBC Medicago truncatula... 105 8e-021
gb|BF003776.1|BF003776 EST432274 KV1 Medicago truncatula cD... 105 8e-021
gb|BI271708.1|BI271708 NF011C12FL1F1097 Developing flower M... 105 8e-021
gb|BM779610.1|BM779610 EST590186 KV2 Medicago truncatula cD... 105 8e-021
gb|AJ502254.1|AJ502254 AJ502254 MTAMP Medicago truncatula c... 105 8e-021
gb|CA989739.1|CA989739 EST643247 GLSD Medicago truncatula c... 105 8e-021
gb|CA991416.1|CA991416 EST644924 GESD Medicago truncatula c... 105 8e-021
gb|CB892321.1|CB892321 EST649290 KV3 Medicago truncatula cD... 105 8e-021
gb|CB892929.1|CB892929 EST645721 HOGA Medicago truncatula c... 105 8e-021
gb|CX517073.1|CX517073 s13dNF12C02VI018_398617 Virus-Infect... 105 8e-021
gb|CX518047.1|CX518047 s13dNF31D08VI074_421807 Virus-Infect... 105 8e-021
gb|CX518123.1|CX518123 s13dNF27D02VI014_421959 Virus-Infect... 105 8e-021
gb|CX520294.1|CX520294 s13dNF40A01VI001_444640 Virus-Infect... 105 8e-021
gb|CX521755.1|CX521755 s13dNF1SH04VI042_469314 Virus-Infect... 105 8e-021
gb|CX522959.1|CX522959 s13dNF87A06VI049_471722 Virus-Infect... 105 8e-021
gb|BG648445.1|BG648445 EST510064 HOGA Medicago truncatula c... 100 5e-019
gb|BI312109.1|BI312109 EST5313859 GESD Medicago truncatula ... 100 5e-019
gb|CB895213.1|CB895213 EST648005 HOGA Medicago truncatula c... 100 5e-019
gb|CA920840.1|CA920840 EST638558 MTUS Medicago truncatula c... 98 2e-018
gb|BG456918.1|BG456918 NF099B09PL1F1075 Phosphate starved l... 96 8e-018
gb|BG646785.1|BG646785 EST508404 HOGA Medicago truncatula c... 96 8e-018
gb|BQ122598.1|BQ122598 EST608174 GLSD Medicago truncatula c... 96 8e-018
gb|CX542227.1|CX542227 s13dNF86H03GS028_467762 Germinating ... 96 8e-018
gb|DW016606.1|DW016606 EST1225567 MTY Medicago truncatula c... 94 3e-017
gb|AW684102.1|AW684102 NF012D09NR1F1000 Nodulated root Medi... 78 2e-012
gb|BQ123499.1|BQ123499 EST609075 GLSD Medicago truncatula c... 76 7e-012
gb|CA921380.1|CA921380 EST639098 MTUS Medicago truncatula c... 76 7e-012
gb|BI309005.1|BI309005 EST530415 GPOD Medicago truncatula c... 66 7e-009
gb|CX538325.1|CX538325 s13dNF80B01GS009_459902 Germinating ... 62 1e-007
emb|CR335431.1| mte1-66I9FM1 BAC end, cultivar Jemalong A17... 58 2e-006
gb|AC160838.12| Medicago truncatula clone mth2-158e24, WORK... 54 3e-005
gb|CG957794.1|CG957794 MBEFL59TF mth2 Medicago truncatula g... 42 0.100
gb|CG960901.1|CG960901 MBENK08TF mth2 Medicago truncatula g... 42 0.100
gb|CB894497.1|CB894497 EST647289 HOGA Medicago truncatula c... 42 0.100
>gb|BE204926.1|BE204926 EST397546 KV0 Medicago truncatula cDNA clone pKV0-18L21, mRNA
sequence
Length = 603
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 184 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 243
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 244 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 303
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 304 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 363
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 364 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 423
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 424 tcagggctaggttctacatggagcc 448
>gb|AL385609.1|AL385609 MtBC29E08F1 MtBC Medicago truncatula cDNA clone MtBC29E08 T3, mRNA
sequence
Length = 454
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 135 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 194
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 195 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 254
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 255 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 314
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 315 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 374
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 375 tcagggctaggttctacatggagcc 399
>gb|AL388861.1|AL388861 MtBC51C02F1 MtBC Medicago truncatula cDNA clone MtBC51C02 T3, mRNA
sequence
Length = 491
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 135 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 194
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 195 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 254
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 255 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 314
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 315 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 374
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 375 tcagggctaggttctacatggagcc 399
>gb|BF003776.1|BF003776 EST432274 KV1 Medicago truncatula cDNA clone pKV1-13L5, mRNA
sequence
Length = 601
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 264 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 323
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 324 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 383
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 384 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 443
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 444 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 503
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 504 tcagggctaggttctacatggagcc 528
Score = 61.9 bits (31), Expect = 1e-007
Identities = 100/123 (81%)
Strand = Plus / Plus
Query: 261 gatcagggagcttctcatatctttctggagggcaactggacagaaaccaaagaggatcat 320
||||| ||||||||| ||||||||| | || || |||||||| || || || | |||||
Sbjct: 1 gatcaaggagcttcttatatctttccgtagagctactggacaaaagccccagcgcatcat 60
Query: 321 attctacagggatggcgtcagtgagggacaattctaccaagttctgttgtatgaacttga 380
|| ||||| ||||| || || ||||||||||| ||||| || ||||||| ||| |||||
Sbjct: 61 cttttacagagatggagtgagcgagggacaattttaccaggtgctgttgtttgagcttga 120
Query: 381 tgc 383
|||
Sbjct: 121 tgc 123
>gb|BI271708.1|BI271708 NF011C12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF011C12FL 5', mRNA sequence
Length = 691
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 151 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 210
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 211 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 270
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 271 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 330
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 331 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 390
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 391 tcagggctaggttctacatggagcc 415
>gb|BM779610.1|BM779610 EST590186 KV2 Medicago truncatula cDNA clone pKV2-52F5, mRNA
sequence
Length = 796
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 318 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 377
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 378 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 437
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 438 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 497
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 498 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 557
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 558 tcagggctaggttctacatggagcc 582
Score = 71.9 bits (36), Expect = 1e-010
Identities = 141/176 (80%)
Strand = Plus / Plus
Query: 208 gatcttttcaaggtatggcaagatcccgaaagggggactgtctctggtggcatgatcagg 267
||||||||||| |||||||||||| | |||||||| | | ||||| ||||||| |
Sbjct: 2 gatcttttcaaacaatggcaagatccagtcagggggacattgaccggtggaatgatcaag 61
Query: 268 gagcttctcatatctttctggagggcaactggacagaaaccaaagaggatcatattctac 327
|||||||| ||||||||| | || || |||||||| || || || | ||||| || |||
Sbjct: 62 gagcttcttatatctttccgtagagctactggacaaaagccccagcgcatcatcttttac 121
Query: 328 agggatggcgtcagtgagggacaattctaccaagttctgttgtatgaacttgatgc 383
|| ||||| || || ||||||||||| ||||| || ||||||| ||| ||||||||
Sbjct: 122 agagatggagtgagcgagggacaattttaccaggtgctgttgtttgagcttgatgc 177
>gb|AJ502254.1|AJ502254 AJ502254 MTAMP Medicago truncatula cDNA clone mtgmadc120018e05,
mRNA sequence
Length = 604
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 208 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 267
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 268 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 327
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 328 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 387
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 388 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 447
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 448 tcagggctaggttctacatggagcc 472
Score = 42.1 bits (21), Expect = 0.100
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 343 gagggacaattctaccaagttctgttgtatgaacttgatgc 383
||||||||||| ||||| || ||||||| ||| ||||||||
Sbjct: 27 gagggacaattttaccaggtgctgttgtttgagcttgatgc 67
>gb|CA989739.1|CA989739 EST643247 GLSD Medicago truncatula cDNA clone pGLSD-42J7, mRNA
sequence
Length = 647
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 145 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 204
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 205 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 264
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 265 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 324
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 325 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 384
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 385 tcagggctaggttctacatggagcc 409
>gb|CA991416.1|CA991416 EST644924 GESD Medicago truncatula cDNA clone GESD-32N10, mRNA
sequence
Length = 657
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 89 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 148
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 149 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 208
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 209 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 268
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 269 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 328
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 329 tcagggctaggttctacatggagcc 353
>gb|CB892321.1|CB892321 EST649290 KV3 Medicago truncatula cDNA clone KV3-53J20, mRNA
sequence
Length = 852
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 181 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 240
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 241 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 300
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 301 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 360
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 361 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 420
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 421 tcagggctaggttctacatggagcc 445
>gb|CB892929.1|CB892929 EST645721 HOGA Medicago truncatula cDNA clone HOGA-26O13, mRNA
sequence
Length = 776
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 449 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 508
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 509 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 568
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 569 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 628
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 629 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 688
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 689 tcagggctaggttctacatggagcc 713
Score = 75.8 bits (38), Expect = 7e-012
Identities = 207/266 (77%)
Strand = Plus / Plus
Query: 118 gcagctgtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtgagt 177
|||||||| ||||||| |||||| ||||| || |||| |||||||| || ||||| ||
Sbjct: 43 gcagctgttgttgcttctcaagattggcccgaaattaccaagtatgctggtttggtttgt 102
Query: 178 gctcaagcccatcgnnnnnnnntgatacaggatcttttcaaggtatggcaagatcccgaa 237
|| ||||| ||||| | || || ||||||||||| |||||||||||| |
Sbjct: 103 gcccaagcacatcgccaagagctcattcaagatcttttcaaacaatggcaagatccagtc 162
Query: 238 agggggactgtctctggtggcatgatcagggagcttctcatatctttctggagggcaact 297
|||||||| | | ||||| ||||||| ||||||||| ||||||||| | || || |||
Sbjct: 163 agggggacattgaccggtggaatgatcaaggagcttcttatatctttccgtagagctact 222
Query: 298 ggacagaaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctac 357
||||| || || || | ||||| || ||||| ||||| || || ||||||||||| |||
Sbjct: 223 ggacaaaagccccagcgcatcatcttttacagagatggagtgagcgagggacaattttac 282
Query: 358 caagttctgttgtatgaacttgatgc 383
|| || ||||||| ||| ||||||||
Sbjct: 283 caggtgctgttgtttgagcttgatgc 308
>gb|CX517073.1|CX517073 s13dNF12C02VI018_398617 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 543
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 122 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 181
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 182 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 241
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 242 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 301
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 302 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 361
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 362 tcagggctaggttctacatggagcc 386
>gb|CX518047.1|CX518047 s13dNF31D08VI074_421807 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 598
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 12 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 71
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 72 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 131
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 132 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 191
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 192 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 251
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 252 tcagggctaggttctacatggagcc 276
>gb|CX518123.1|CX518123 s13dNF27D02VI014_421959 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 579
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 12 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 71
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 72 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 131
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 132 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 191
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 192 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 251
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 252 tcagggctaggttctacatggagcc 276
>gb|CX520294.1|CX520294 s13dNF40A01VI001_444640 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 472
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 70 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 129
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 130 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 189
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 190 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 249
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 250 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 309
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 310 tcagggctaggttctacatggagcc 334
>gb|CX521755.1|CX521755 s13dNF1SH04VI042_469314 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 545
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 12 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 71
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 72 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 131
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 132 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 191
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 192 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 251
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 252 tcagggctaggttctacatggagcc 276
>gb|CX522959.1|CX522959 s13dNF87A06VI049_471722 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 471
Score = 105 bits (53), Expect = 8e-021
Identities = 212/265 (80%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 12 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 71
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 72 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 131
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 132 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 191
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 192 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 251
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 252 tcagggctaggttctacatggagcc 276
>gb|BG648445.1|BG648445 EST510064 HOGA Medicago truncatula cDNA clone pHOGA-19F10 5' end,
mRNA sequence
Length = 832
Score = 99.6 bits (50), Expect = 5e-019
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 526 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 585
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 586 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 645
Query: 644 agaacaactttacggctgatgg 665
|||| || |||| ||||||||
Sbjct: 646 agaataattttagtgctgatgg 667
Score = 95.6 bits (48), Expect = 8e-018
Identities = 250/320 (78%)
Strand = Plus / Plus
Query: 64 tttggtgctgatgtgacccatccccatcctggggaagattctagtccttccattgcagct 123
|||||||||||||| || ||||| || ||||| || ||||| || || || || ||||||
Sbjct: 66 tttggtgctgatgttactcatccacaccctggagaggattcaagcccatcaatagcagct 125
Query: 124 gtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtgagtgctcaa 183
|| ||||||| |||||| ||||| || |||| |||||||| || ||||| |||| |||
Sbjct: 126 gttgttgcttctcaagattggcccgaaattaccaagtatgctggtttggtttgtgcccaa 185
Query: 184 gcccatcgnnnnnnnntgatacaggatcttttcaaggtatggcaagatcccgaaaggggg 243
|| ||||| | || || ||||||||||| |||||||||||| | ||||||
Sbjct: 186 gcacatcgccaagagctcattcaagatcttttcaaacaatggcaagatccagtcaggggg 245
Query: 244 actgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactggacag 303
|| | | ||||| ||||||| ||||||||| ||||||||| | || || ||||||||
Sbjct: 246 acattgaccggtggaatgatcaaggagcttcttatatctttccgtagagctactggacaa 305
Query: 304 aaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaagtt 363
|| || || | ||||| || ||||| ||||| || || ||||||||||| ||||| ||
Sbjct: 306 aagccccagcgcatcatcttttacagagatggagtgagcgagggacaattttaccaggtg 365
Query: 364 ctgttgtatgaacttgatgc 383
||||||| ||| ||||||||
Sbjct: 366 ctgttgtttgagcttgatgc 385
>gb|BI312109.1|BI312109 EST5313859 GESD Medicago truncatula cDNA clone pGESD17C13 5' end,
mRNA sequence
Length = 741
Score = 99.6 bits (50), Expect = 5e-019
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 401 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 460
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 461 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 520
Query: 644 agaacaactttacggctgatgg 665
|||| || |||| ||||||||
Sbjct: 521 agaataattttagtgctgatgg 542
Score = 71.9 bits (36), Expect = 1e-010
Identities = 141/176 (80%)
Strand = Plus / Plus
Query: 208 gatcttttcaaggtatggcaagatcccgaaagggggactgtctctggtggcatgatcagg 267
||||||||||| |||||||||||| | |||||||| | | ||||| ||||||| |
Sbjct: 85 gatcttttcaaacaatggcaagatccagtcagggggacattgaccggtggaatgatcaag 144
Query: 268 gagcttctcatatctttctggagggcaactggacagaaaccaaagaggatcatattctac 327
|||||||| ||||||||| | || || |||||||| || || || | ||||| || |||
Sbjct: 145 gagcttcttatatctttccgtagagctactggacaaaagccccagcgcatcatcttttac 204
Query: 328 agggatggcgtcagtgagggacaattctaccaagttctgttgtatgaacttgatgc 383
|| ||||| || || ||||||||||| ||||| || ||||||| ||| ||||||||
Sbjct: 205 agagatggagtgagcgagggacaattttaccaggtgctgttgtttgagcttgatgc 260
>gb|CB895213.1|CB895213 EST648005 HOGA Medicago truncatula cDNA clone HOGA-33N16, mRNA
sequence
Length = 892
Score = 99.6 bits (50), Expect = 5e-019
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 725 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 784
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 785 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 844
Query: 644 agaacaactttacggctgatgg 665
|||| || |||| ||||||||
Sbjct: 845 agaataattttagtgctgatgg 866
Score = 95.6 bits (48), Expect = 8e-018
Identities = 250/320 (78%)
Strand = Plus / Plus
Query: 64 tttggtgctgatgtgacccatccccatcctggggaagattctagtccttccattgcagct 123
|||||||||||||| || ||||| || ||||| || ||||| || || || || ||||||
Sbjct: 265 tttggtgctgatgttactcatccacaccctggagaggattcaagcccatcaatagcagct 324
Query: 124 gtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtgagtgctcaa 183
|| ||||||| |||||| ||||| || |||| |||||||| || ||||| |||| |||
Sbjct: 325 gttgttgcttctcaagattggcccgaaattaccaagtatgctggtttggtttgtgcccaa 384
Query: 184 gcccatcgnnnnnnnntgatacaggatcttttcaaggtatggcaagatcccgaaaggggg 243
|| ||||| | || || ||||||||||| |||||||||||| | ||||||
Sbjct: 385 gcacatcgccaagagctcattcaagatcttttcaaacaatggcaagatccagtcaggggg 444
Query: 244 actgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactggacag 303
|| | | ||||| ||||||| ||||||||| ||||||||| | || || ||||||||
Sbjct: 445 acattgaccggtggaatgatcaaggagcttcttatatctttccgtagagctactggacaa 504
Query: 304 aaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaagtt 363
|| || || | ||||| || ||||| ||||| || || ||||||||||| ||||| ||
Sbjct: 505 aagccccagcgcatcatcttttacagagatggagtgagcgagggacaattttaccaggtg 564
Query: 364 ctgttgtatgaacttgatgc 383
||||||| ||| ||||||||
Sbjct: 565 ctgttgtttgagcttgatgc 584
>gb|CA920840.1|CA920840 EST638558 MTUS Medicago truncatula cDNA clone MTUS-32A1, mRNA
sequence
Length = 743
Score = 97.6 bits (49), Expect = 2e-018
Identities = 212/265 (80%), Gaps = 1/265 (0%)
Strand = Plus / Minus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| |||||| |||| || |||||||||||||| || || ||||| || || || |
Sbjct: 630 tgcctggtactgtg-tggattctaagatctgccatcccacagaatttgacttttatcttt 572
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 571 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 512
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
|||| || |||| |||||||| | |||| | | || || ||| |||| ||||| ||||
Sbjct: 511 agaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatatg 452
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| || ||||| || || || || ||||| || || ||||| ||||| || |||| || |
Sbjct: 451 ccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgcat 392
Query: 764 tccgagctcggttctacatggagcc 788
|| | ||| ||||||||||||||||
Sbjct: 391 tcagggctaggttctacatggagcc 367
>gb|BG456918.1|BG456918 NF099B09PL1F1075 Phosphate starved leaf Medicago truncatula cDNA
clone NF099B09PL 5', mRNA sequence
Length = 683
Score = 95.6 bits (48), Expect = 8e-018
Identities = 250/320 (78%)
Strand = Plus / Plus
Query: 64 tttggtgctgatgtgacccatccccatcctggggaagattctagtccttccattgcagct 123
|||||||||||||| || ||||| || ||||| || ||||| || || || || ||||||
Sbjct: 24 tttggtgctgatgttactcatccacaccctggagaggattcaagcccatcaatagcagct 83
Query: 124 gtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtgagtgctcaa 183
|| ||||||| |||||| ||||| || |||| |||||||| || ||||| |||| |||
Sbjct: 84 gttgttgcttctcaagattggcccgaaattaccaagtatgctggtttggtttgtgcccaa 143
Query: 184 gcccatcgnnnnnnnntgatacaggatcttttcaaggtatggcaagatcccgaaaggggg 243
|| ||||| | || || ||||||||||| |||||||||||| | ||||||
Sbjct: 144 gcacatcgccaagagctcattcaagatcttttcaaacaatggcaagatccagtcaggggg 203
Query: 244 actgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactggacag 303
|| | | ||||| ||||||| ||||||||| ||||||||| | || || ||||||||
Sbjct: 204 acattgaccggtggaatgatcaaggagcttcttatatctttccgtagagctactggacaa 263
Query: 304 aaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaagtt 363
|| || || | ||||| || ||||| ||||| || || ||||||||||| ||||| ||
Sbjct: 264 aagccccagcgcatcatcttttacagagatggagtgagcgagggacaattttaccaggtg 323
Query: 364 ctgttgtatgaacttgatgc 383
||||||| ||| ||||||||
Sbjct: 324 ctgttgtttgagcttgatgc 343
Score = 93.7 bits (47), Expect = 3e-017
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 484 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 543
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||| ||||||
Sbjct: 544 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgngggatg 603
Query: 644 agaacaactttacggctgatgg 665
|||| || |||| ||||||||
Sbjct: 604 agaataattttagtgctgatgg 625
>gb|BG646785.1|BG646785 EST508404 HOGA Medicago truncatula cDNA clone pHOGA-9F10 5' end,
mRNA sequence
Length = 700
Score = 95.6 bits (48), Expect = 8e-018
Identities = 250/320 (78%)
Strand = Plus / Plus
Query: 64 tttggtgctgatgtgacccatccccatcctggggaagattctagtccttccattgcagct 123
|||||||||||||| || ||||| || ||||| || ||||| || || || || ||||||
Sbjct: 101 tttggtgctgatgttactcatccacaccctggagaggattcaagcccatcaatagcagct 160
Query: 124 gtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtgagtgctcaa 183
|| ||||||| |||||| ||||| || |||| |||||||| || ||||| |||| |||
Sbjct: 161 gttgttgcttctcaagattggcccgaaattaccaagtatgctggtttggtttgtgcccaa 220
Query: 184 gcccatcgnnnnnnnntgatacaggatcttttcaaggtatggcaagatcccgaaaggggg 243
|| ||||| | || || ||||||||||| |||||||||||| | ||||||
Sbjct: 221 gcacatcgccaagagctcattcaagatcttttcaaacaatggcaagatccagtcaggggg 280
Query: 244 actgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactggacag 303
|| | | ||||| ||||||| ||||||||| ||||||||| | || || ||||||||
Sbjct: 281 acattgaccggtggaatgatcaaggagcttcttatatctttccgtagagctactggacaa 340
Query: 304 aaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaagtt 363
|| || || | ||||| || ||||| ||||| || || ||||||||||| ||||| ||
Sbjct: 341 aagccccagcgcatcatcttttacagagatggagtgagcgagggacaattttaccaggtg 400
Query: 364 ctgttgtatgaacttgatgc 383
||||||| ||| ||||||||
Sbjct: 401 ctgttgtttgagcttgatgc 420
Score = 63.9 bits (32), Expect = 3e-008
Identities = 101/124 (81%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || |||| || || || |
Sbjct: 561 tgcctggtactgttgtggattctaagatctgccatcccacagaaattgacttttatcttt 620
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||| || |||||||| || || || || ||||| |||||||| |
Sbjct: 621 gcagccatgctggaattccaggcacaagccgtcccgctcactatcatgtgctgtgggagg 680
Query: 644 agaa 647
||||
Sbjct: 681 agaa 684
>gb|BQ122598.1|BQ122598 EST608174 GLSD Medicago truncatula cDNA clone pGLSD-29O2, mRNA
sequence
Length = 430
Score = 95.6 bits (48), Expect = 8e-018
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 292 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 351
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 352 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 411
Query: 644 agaa 647
||||
Sbjct: 412 agaa 415
Score = 69.9 bits (35), Expect = 4e-010
Identities = 107/131 (81%)
Strand = Plus / Plus
Query: 253 ggtggcatgatcagggagcttctcatatctttctggagggcaactggacagaaaccaaag 312
||||| ||||||| ||||||||| ||||||||| | || || |||||||| || || ||
Sbjct: 21 ggtggaatgatcaaggagcttcttatatctttccgtagagctactggacaaaagccccag 80
Query: 313 aggatcatattctacagggatggcgtcagtgagggacaattctaccaagttctgttgtat 372
| ||||| || ||||| ||||| || || ||||||||||| ||||| || ||||||| |
Sbjct: 81 cgcatcatcttttacagagatggagtgagcgagggacaattttaccaggtgctgttgttt 140
Query: 373 gaacttgatgc 383
|| ||||||||
Sbjct: 141 gagcttgatgc 151
>gb|CX542227.1|CX542227 s13dNF86H03GS028_467762 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 603
Score = 95.6 bits (48), Expect = 8e-018
Identities = 250/320 (78%)
Strand = Plus / Plus
Query: 64 tttggtgctgatgtgacccatccccatcctggggaagattctagtccttccattgcagct 123
|||||||||||||| || ||||| || ||||| || ||||| || || || || ||||||
Sbjct: 80 tttggtgctgatgttactcatccacaccctggagaggattcaagcccatcaatagcagct 139
Query: 124 gtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtgagtgctcaa 183
|| ||||||| |||||| ||||| || |||| |||||||| || ||||| |||| |||
Sbjct: 140 gttgttgcttctcaagattggcccgaaattaccaagtatgctggtttggtttgtgcccaa 199
Query: 184 gcccatcgnnnnnnnntgatacaggatcttttcaaggtatggcaagatcccgaaaggggg 243
|| ||||| | || || ||||||||||| |||||||||||| | ||||||
Sbjct: 200 gcacatcgccaagagctcattcaagatcttttcaaacaatggcaagatccagtcaggggg 259
Query: 244 actgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactggacag 303
|| | | ||||| ||||||| ||||||||| ||||||||| | || || ||||||||
Sbjct: 260 acattgaccggtggaatgatcaaggagcttcttatatctttccgtagagctactggacaa 319
Query: 304 aaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaagtt 363
|| || || | ||||| || ||||| ||||| || || ||||||||||| ||||| ||
Sbjct: 320 aagccccagcgcatcatcttttacagagatggagtgagcgagggacaattttaccaggtg 379
Query: 364 ctgttgtatgaacttgatgc 383
||||||| ||| ||||||||
Sbjct: 380 ctgttgtttgagcttgatgc 399
Score = 42.1 bits (21), Expect = 0.100
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatcc 560
||||||| ||||| ||||| || ||||||||||||||
Sbjct: 540 tgcctggtactgttgtggattctaagatctgccatcc 576
>gb|DW016606.1|DW016606 EST1225567 MTY Medicago truncatula cDNA clone MTYAJ38, mRNA
sequence
Length = 735
Score = 93.7 bits (47), Expect = 3e-017
Identities = 104/123 (84%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 612 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 671
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
||||||||||||| |||||||| |||||||| || || || || ||||| ||||||||||
Sbjct: 672 gcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggatg 731
Query: 644 aga 646
|||
Sbjct: 732 aga 734
Score = 87.7 bits (44), Expect = 2e-015
Identities = 249/320 (77%)
Strand = Plus / Plus
Query: 64 tttggtgctgatgtgacccatccccatcctggggaagattctagtccttccattgcagct 123
|||||||||||||| || ||||| || ||||| || ||||| || || || || ||||||
Sbjct: 152 tttggtgctgatgttactcatccacaccctggagaggattcaagcccatcaatagcagct 211
Query: 124 gtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtgagtgctcaa 183
|| ||||||| |||||| ||||| || |||| |||||||| || ||||| |||| |||
Sbjct: 212 gttgttgcttctcaagattggcccgaaattaccaagtatgctggtttggtttgtgcccaa 271
Query: 184 gcccatcgnnnnnnnntgatacaggatcttttcaaggtatggcaagatcccgaaaggggg 243
|| ||||| | || || ||||||||||| |||||||||||| | ||||||
Sbjct: 272 gcacatcgccaagagctcattcaagatcttttcaaacaatggcaagatccagtcaggggg 331
Query: 244 actgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactggacag 303
|| | | ||||| ||||||| |||| |||| ||||||||| | || || ||||||||
Sbjct: 332 acattgaccggtggaatgatcaaggagtttcttatatctttccgtagagctactggacaa 391
Query: 304 aaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaagtt 363
|| || || | ||||| || ||||| ||||| || || ||||||||||| ||||| ||
Sbjct: 392 aagccccagcgcatcatcttttacagagatggagtgagcgagggacaattttaccaggtg 451
Query: 364 ctgttgtatgaacttgatgc 383
||||||| ||| ||||||||
Sbjct: 452 ctgttgtttgagcttgatgc 471
>gb|AW684102.1|AW684102 NF012D09NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF012D09NR 5', mRNA sequence
Length = 444
Score = 77.8 bits (39), Expect = 2e-012
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||| || |||||||||||||| || || ||||| || || || |
Sbjct: 332 tgcctggtactgttgtggattctaagatctgccatcccacagaatttgacttttatcttt 391
Query: 584 gcagccatgctggcattcagggaacaagccg 614
||||||||||||| |||||||| ||||||||
Sbjct: 392 gcagccatgctggaattcagggcacaagccg 422
Score = 71.9 bits (36), Expect = 1e-010
Identities = 141/176 (80%)
Strand = Plus / Plus
Query: 208 gatcttttcaaggtatggcaagatcccgaaagggggactgtctctggtggcatgatcagg 267
||||||||||| |||||||||||| | |||||||| | | ||||| ||||||| |
Sbjct: 16 gatcttttcaaacaatggcaagatccagtcagggggacattgaccggtggaatgatcaag 75
Query: 268 gagcttctcatatctttctggagggcaactggacagaaaccaaagaggatcatattctac 327
|||||||| ||||||||| | || || |||||||| || || || | ||||| || |||
Sbjct: 76 gagcttcttatatctttccgtagagctactggacaaaagccccagcgcatcatcttttac 135
Query: 328 agggatggcgtcagtgagggacaattctaccaagttctgttgtatgaacttgatgc 383
|| ||||| || || ||||||||||| ||||| || ||||||| ||| ||||||||
Sbjct: 136 agagatggagtgagcgagggacaattttaccaggtgctgttgtttgagcttgatgc 191
>gb|BQ123499.1|BQ123499 EST609075 GLSD Medicago truncatula cDNA clone pGLSD-32B13, mRNA
sequence
Length = 534
Score = 75.8 bits (38), Expect = 7e-012
Identities = 225/290 (77%)
Strand = Plus / Plus
Query: 64 tttggtgctgatgtgacccatccccatcctggggaagattctagtccttccattgcagct 123
|||||||||||||| || ||||| || ||||| || ||||| || || || || ||||||
Sbjct: 242 tttggtgctgatgttactcatccacaccctggagaggattcaagcccatcaatagcagct 301
Query: 124 gtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtgagtgctcaa 183
|| ||||||| |||||| ||||| || |||| |||||||| || ||||| |||| |||
Sbjct: 302 gttgttgcttctcaagattggcccgaaattaccaagtatgctggtttggtttgtgcccaa 361
Query: 184 gcccatcgnnnnnnnntgatacaggatcttttcaaggtatggcaagatcccgaaaggggg 243
|| ||||| | || || ||||||||||| |||||||||||| | ||||||
Sbjct: 362 gcacatcgccaagagctcattcaagatcttttcaaacaatggcaagatccagtcaggggg 421
Query: 244 actgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactggacag 303
|| | | ||||| ||||||| ||||||||| ||||||||| | || || ||||||||
Sbjct: 422 acattgaccggtggaatgatcaaggagcttcttatatctttccgtagagctactggacaa 481
Query: 304 aaaccaaagaggatcatattctacagggatggcgtcagtgagggacaatt 353
|| || || | ||||| || ||||| ||||| || || |||||||||||
Sbjct: 482 aagccccagcgcatcatcttttacagagatggagtgagcgagggacaatt 531
>gb|CA921380.1|CA921380 EST639098 MTUS Medicago truncatula cDNA clone MTUS-39F8, mRNA
sequence
Length = 736
Score = 75.8 bits (38), Expect = 7e-012
Identities = 164/206 (79%)
Strand = Plus / Minus
Query: 583 tgcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggat 642
|||||||||||||| |||||||| |||||||| || || || || ||||| |||||||||
Sbjct: 712 tgcagccatgctggaattcagggcacaagccgtcccgctcactatcatgtgctgtgggat 653
Query: 643 gagaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtat 702
||||| || |||| |||||||| | |||| | | || || ||| |||| ||||| |||
Sbjct: 652 gagaataattttagtgctgatggtcttcaaagtttaactaataacctgtgctacacatat 593
Query: 703 gctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcc 762
|| || ||||| || || || || ||||| || || ||||| ||||| || |||| ||
Sbjct: 592 gccagatgcacccgttctgtttctattgtgcccccagcatattatgcacatttggctgca 533
Query: 763 ttccgagctcggttctacatggagcc 788
||| | ||| ||||||||||||||||
Sbjct: 532 ttcagggctaggttctacatggagcc 507
>gb|BI309005.1|BI309005 EST530415 GPOD Medicago truncatula cDNA clone pGPOD-10K2 5' end,
mRNA sequence
Length = 600
Score = 65.9 bits (33), Expect = 7e-009
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 289 agggcaactggacagaaaccaaagaggatcatattctacagggatggcgtcagtgaggga 348
|||||||| |||||||| ||| | ||||| |||||||| |||||||| || ||||| |||
Sbjct: 338 agggcaacaggacagaagccacaaaggattatattctatagggatggtgttagtgaagga 397
Query: 349 caattctaccaagttct 365
|| || |||||||||||
Sbjct: 398 cagttttaccaagttct 414
Score = 46.1 bits (23), Expect = 0.006
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 93 tggggaagattctagtccttccattgcagctgtggttgcttttcaagactggcctgaggt 152
|||||||||||| || || || || |||||||| || || | ||||| |||||||| ||
Sbjct: 142 tggggaagattccagcccctcaatagcagctgttgtagcatcccaagattggcctgaagt 201
Query: 153 tacaaagtatgcagg 167
||||||||| |||||
Sbjct: 202 tacaaagtacgcagg 216
>gb|CX538325.1|CX538325 s13dNF80B01GS009_459902 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 597
Score = 61.9 bits (31), Expect = 1e-007
Identities = 185/239 (77%)
Strand = Plus / Plus
Query: 64 tttggtgctgatgtgacccatccccatcctggggaagattctagtccttccattgcagct 123
|||||||||||||| || ||||| || ||||| || ||||| || || || || ||||||
Sbjct: 328 tttggtgctgatgttactcatccacaccctggagaggattcaagcccatcaatagcagct 387
Query: 124 gtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtgagtgctcaa 183
| ||||||| |||||| ||||| || |||| |||||||| || ||||| |||| |||
Sbjct: 388 ggtgttgcttctcaagattggcccgaaattaccaagtatgctggtttggtttgtgcccaa 447
Query: 184 gcccatcgnnnnnnnntgatacaggatcttttcaaggtatggcaagatcccgaaaggggg 243
|| ||||| | || || ||||||||||| |||||||||||| | ||||||
Sbjct: 448 gcacatcgccaagagctcattcaagatcttttcaaacaatggcaagatccagtcaggggg 507
Query: 244 actgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactggaca 302
|| | | ||||| ||||||| ||||||||| ||||||||| | || || ||||||||
Sbjct: 508 acattgaccggtggaatgatcaaggagcttcttatatctttccgtagagctactggaca 566
>emb|CR335431.1| mte1-66I9FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 806
Score = 58.0 bits (29), Expect = 2e-006
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 532 actgtggtggactcgaagatctgccatccaactgagtttgatttctacctgtgcagccat 591
||||| ||||| || |||||||||||||| || || ||||| || || || |||||||||
Sbjct: 95 actgttgtggattctaagatctgccatcccacagaatttgacttttatctttgcagccat 154
Query: 592 gctggcattcagg 604
||||| |||||||
Sbjct: 155 gctggaattcagg 167
Score = 40.1 bits (20), Expect = 0.39
Identities = 53/64 (82%)
Strand = Plus / Plus
Query: 602 agggaacaagccgccctgcccattaccatgttctgtgggatgagaacaactttacggctg 661
|||| |||||||| || || || || ||||| |||||||||||||| || |||| ||||
Sbjct: 246 agggcacaagccgtcccgctcactatcatgtgctgtgggatgagaataattttagtgctg 305
Query: 662 atgg 665
||||
Sbjct: 306 atgg 309
>gb|AC160838.12| Medicago truncatula clone mth2-158e24, WORKING DRAFT SEQUENCE, 4
ordered pieces
Length = 120311
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 136 caagactggcctgaggttacaaagtatgcaggattggtgagtgctca 182
||||||||||| || || |||||||||||||||||||| |||||||
Sbjct: 41488 caagactggccagaagtgacaaagtatgcaggattggtatgtgctca 41442
Score = 54.0 bits (27), Expect = 3e-005
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 292 gcaactggacagaaaccaaagaggatcatattctacagggatggcgtcagtgagggacaa 351
||||||||| |||||||| ||||| |||| ||||||||||| || ||||| |||||
Sbjct: 41231 gcaactggaaagaaaccatgtaggatattattttacagggatggggtaagtgaaggacag 41172
Query: 352 ttctaccaagttctgttgtatgaacttgatgccat 386
|||||||| ||| || | ||||| || ||||||||
Sbjct: 41171 ttctaccaggttttgctatatgagctcgatgccat 41137
Score = 50.1 bits (25), Expect = 4e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 532 actgtggtggactcgaagatctgccatccaactgagtttgatttctacctgtgcagccat 591
|||||||||||| | ||||| || ||||| |||||||| || |||||| |||| || |||
Sbjct: 40690 actgtggtggacacaaagatttgtcatcctactgagttcgacttctacttgtgtagtcat 40631
Query: 592 gctgg 596
|||||
Sbjct: 40630 gctgg 40626
Score = 42.1 bits (21), Expect = 0.100
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 733 cctcctgcatactatgctcacctggcagccttccgagctcggttctacatgga 785
|||||||| ||||||||||| ||||| || | | |||| || |||||||||||
Sbjct: 40174 cctcctgcgtactatgctcatctggctgcttacagagcgcgattctacatgga 40122
>gb|CG957794.1|CG957794 MBEFL59TF mth2 Medicago truncatula genomic clone 44J22, DNA
sequence
Length = 816
Score = 42.1 bits (21), Expect = 0.100
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 343 gagggacaattctaccaagttctgttgtatgaacttgatgc 383
||||||||||| ||||| || ||||||| ||| ||||||||
Sbjct: 632 gagggacaattttaccaggtgctgttgtttgagcttgatgc 672
>gb|CG960901.1|CG960901 MBENK08TF mth2 Medicago truncatula genomic clone 8B15, DNA sequence
Length = 836
Score = 42.1 bits (21), Expect = 0.100
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 343 gagggacaattctaccaagttctgttgtatgaacttgatgc 383
||||||||||| ||||| || ||||||| ||| ||||||||
Sbjct: 632 gagggacaattttaccaggtgctgttgtttgagcttgatgc 672
>gb|CB894497.1|CB894497 EST647289 HOGA Medicago truncatula cDNA clone HOGA-31K16, mRNA
sequence
Length = 623
Score = 42.1 bits (21), Expect = 0.100
Identities = 126/161 (78%)
Strand = Plus / Plus
Query: 628 catgttctgtgggatgagaacaactttacggctgatgggttgcaaactctcaccaacaac 687
||||| |||||||||||||| || |||| |||||||| | |||| | | || || |||
Sbjct: 20 catgtgctgtgggatgagaataattttagtgctgatggtcttcaaagtttaactaataac 79
Query: 688 ttgtgttacacgtatgctaggtgcacacgctcagtatcgattgttcctcctgcatactat 747
|||| ||||| ||||| || ||||| || || || || ||||| || || ||||| |||
Sbjct: 80 ctgtgctacacatatgccagatgcacccgttctgtttctattgtgcccccagcatattat 139
Query: 748 gctcacctggcagccttccgagctcggttctacatggagcc 788
|| || |||| || ||| | ||| ||||||||||||||||
Sbjct: 140 gcacatttggctgcattcagggctaggttctacatggagcc 180
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 212,297
Number of Sequences: 392609
Number of extensions: 212297
Number of successful extensions: 15484
Number of sequences better than 0.5: 36
Number of HSP's better than 0.5 without gapping: 35
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 15365
Number of HSP's gapped (non-prelim): 89
length of query: 1118
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1098
effective length of database: 433,880,813
effective search space: 476401132674
effective search space used: 476401132674
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)