BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131584.2.3
(687 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW573942.1|AW573942 EST316533 GVN Medicago truncatula cD... 145 6e-033
gb|BF649434.1|BF649434 NF080B09EC1F1076 Elicited cell cultu... 145 6e-033
gb|BF650818.1|BF650818 NF097B10EC1F1079 Elicited cell cultu... 145 6e-033
gb|BI266739.1|BI266739 NF085B07IN1F1061 Insect herbivory Me... 145 6e-033
gb|AJ497473.1|AJ497473 AJ497473 MTFLOW Medicago truncatula ... 145 6e-033
gb|CX520933.1|CX520933 s13dNF59C06VI040_449652 Virus-Infect... 145 6e-033
gb|DW016473.1|DW016473 EST1225434 MTY Medicago truncatula c... 143 2e-032
gb|BM779378.1|BM779378 EST589954 KV2 Medicago truncatula cD... 141 9e-032
gb|CX538446.1|CX538446 s13dNF79E01GS003_460144 Germinating ... 139 3e-031
gb|BG455780.1|BG455780 NF067D09PL1F1076 Phosphate starved l... 133 2e-029
gb|AL376211.1|AL376211 MtBB22A12F1 MtBB Medicago truncatula... 125 5e-027
gb|AJ847442.1|AJ847442 AJ847442 MtSTA Medicago truncatula c... 125 5e-027
gb|DW018764.1|DW018764 EST1227725 MTY Medicago truncatula c... 123 2e-026
gb|BI272395.1|BI272395 NF020H02FL1F1027 Developing flower M... 103 2e-020
gb|BG648003.1|BG648003 EST509622 HOGA Medicago truncatula c... 88 1e-015
gb|BF644261.1|BF644261 NF061F08EC1F1074 Elicited cell cultu... 60 3e-007
gb|CG942236.1|CG942236 MBEDT39TRC mth2 Medicago truncatula ... 58 1e-006
gb|AC142094.12| Medicago truncatula clone mth2-34h6, comple... 58 1e-006
gb|AC153350.13| Medicago truncatula clone mth2-77l10, WORKI... 58 1e-006
gb|AC149303.10| Medicago truncatula clone mth2-76a20, compl... 44 0.015
gb|AC148240.28| Medicago truncatula clone mth2-14d9, WORKIN... 44 0.015
gb|AC149212.22| Medicago truncatula clone mth2-40d11, WORKI... 44 0.015
gb|AC149807.10| Medicago truncatula clone mth2-151h1, WORKI... 42 0.061
>gb|AW573942.1|AW573942 EST316533 GVN Medicago truncatula cDNA clone pGVN-49J6, mRNA
sequence
Length = 393
Score = 145 bits (73), Expect = 6e-033
Identities = 238/293 (81%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| |||||||||||
Sbjct: 369 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacattttgctgatgaaa 310
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
| ||||||||| || ||| |||||||||| || || || || ||||| || ||||| |||
Sbjct: 309 cgatccttgttgactggctgagccttcttctttcctttaccggtcttaggcacctcagtc 250
Query: 416 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 475
||||| ||||| || || || || ||||| || ||||| | ||||||||| | || |||
Sbjct: 249 cacatttcccggacattttcaagaaccatattgcagtgtctatcaaaagccctgacacgg 190
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
|| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||
Sbjct: 189 cctagaagctttttgttgttacgacaattgatcagaacctgtgtgttgtttttcacactc 130
Query: 536 atcattagtactgacagagggcctgtgctaaattcctcttcctctttcttccc 588
||||| ||||| || || || || ||| | |||||||||||||| ||||||||
Sbjct: 129 atcatgagtacagatagtggaccagtgttgaattcctcttcctcattcttccc 77
>gb|BF649434.1|BF649434 NF080B09EC1F1076 Elicited cell culture Medicago truncatula cDNA
clone NF080B09EC 5', mRNA sequence
Length = 656
Score = 145 bits (73), Expect = 6e-033
Identities = 238/293 (81%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| |||||||||||
Sbjct: 453 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacattttgctgatgaaa 394
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
| ||||||||| || ||| |||||||||| || || || || ||||| || ||||| |||
Sbjct: 393 cgatccttgttgactggctgagccttcttctttcctttaccggtcttaggcacctcagtc 334
Query: 416 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 475
||||| ||||| || || || || ||||| || ||||| | ||||||||| | || |||
Sbjct: 333 cacatttcccggacattttcaagaaccatattgcagtgtctatcaaaagccctgacacgg 274
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
|| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||
Sbjct: 273 cctagaagctttttgttgttacgacaattgatcagaacctgtgtgttgtttttcacactc 214
Query: 536 atcattagtactgacagagggcctgtgctaaattcctcttcctctttcttccc 588
||||| ||||| || || || || ||| | |||||||||||||| ||||||||
Sbjct: 213 atcatgagtacagatagtggaccagtgttgaattcctcttcctcattcttccc 161
>gb|BF650818.1|BF650818 NF097B10EC1F1079 Elicited cell culture Medicago truncatula cDNA
clone NF097B10EC 5', mRNA sequence
Length = 664
Score = 145 bits (73), Expect = 6e-033
Identities = 238/293 (81%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| |||||||||||
Sbjct: 446 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacattttgctgatgaaa 387
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
| ||||||||| || ||| |||||||||| || || || || ||||| || ||||| |||
Sbjct: 386 cgatccttgttgactggctgagccttcttctttcctttaccggtcttaggcacctcagtc 327
Query: 416 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 475
||||| ||||| || || || || ||||| || ||||| | ||||||||| | || |||
Sbjct: 326 cacatttcccggacattttcaagaaccatattgcagtgtctatcaaaagccctgacacgg 267
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
|| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||
Sbjct: 266 cctagaagctttttgttgttacgacaattgatcagaacctgtgtgttgtttttcacactc 207
Query: 536 atcattagtactgacagagggcctgtgctaaattcctcttcctctttcttccc 588
||||| ||||| || || || || ||| | |||||||||||||| ||||||||
Sbjct: 206 atcatgagtacagatagtggaccagtgttgaattcctcttcctcattcttccc 154
>gb|BI266739.1|BI266739 NF085B07IN1F1061 Insect herbivory Medicago truncatula cDNA clone
NF085B07IN 5', mRNA sequence
Length = 651
Score = 145 bits (73), Expect = 6e-033
Identities = 238/293 (81%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| |||||||||||
Sbjct: 458 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacattttgctgatgaaa 399
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
| ||||||||| || ||| |||||||||| || || || || ||||| || ||||| |||
Sbjct: 398 cgatccttgttgactggctgagccttcttctttcctttaccggtcttaggcacctcagtc 339
Query: 416 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 475
||||| ||||| || || || || ||||| || ||||| | ||||||||| | || |||
Sbjct: 338 cacatttcccggacattttcaagaaccatattgcagtgtctatcaaaagccctgacacgg 279
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
|| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||
Sbjct: 278 cctagaagctttttgttgttacgacaattgatcagaacctgtgtgttgtttttcacactc 219
Query: 536 atcattagtactgacagagggcctgtgctaaattcctcttcctctttcttccc 588
||||| ||||| || || || || ||| | |||||||||||||| ||||||||
Sbjct: 218 atcatgagtacagatagtggaccagtgttgaattcctcttcctcattcttccc 166
>gb|AJ497473.1|AJ497473 AJ497473 MTFLOW Medicago truncatula cDNA clone mt--abc955109g05,
mRNA sequence
Length = 623
Score = 145 bits (73), Expect = 6e-033
Identities = 238/293 (81%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| |||||||||||
Sbjct: 358 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacattttgctgatgaaa 299
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
| ||||||||| || ||| |||||||||| || || || || ||||| || ||||| |||
Sbjct: 298 cgatccttgttgactggctgagccttcttctttcctttaccggtcttaggcacctcagtc 239
Query: 416 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 475
||||| ||||| || || || || ||||| || ||||| | ||||||||| | || |||
Sbjct: 238 cacatttcccggacattttcaagaaccatattgcagtgtctatcaaaagccctgacacgg 179
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
|| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||
Sbjct: 178 cctagaagctttttgttgttacgacaattgatcagaacctgtgtgttgtttttcacactc 119
Query: 536 atcattagtactgacagagggcctgtgctaaattcctcttcctctttcttccc 588
||||| ||||| || || || || ||| | |||||||||||||| ||||||||
Sbjct: 118 atcatgagtacagatagtggaccagtgttgaattcctcttcctcattcttccc 66
>gb|CX520933.1|CX520933 s13dNF59C06VI040_449652 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 522
Score = 145 bits (73), Expect = 6e-033
Identities = 238/293 (81%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| |||||||||||
Sbjct: 410 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacattttgctgatgaaa 351
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
| ||||||||| || ||| |||||||||| || || || || ||||| || ||||| |||
Sbjct: 350 cgatccttgttgactggctgagccttcttctttcctttaccggtcttaggcacctcagtc 291
Query: 416 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 475
||||| ||||| || || || || ||||| || ||||| | ||||||||| | || |||
Sbjct: 290 cacatttcccggacattttcaagaaccatattgcagtgtctatcaaaagccctgacacgg 231
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
|| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||
Sbjct: 230 cctagaagctttttgttgttacgacaattgatcagaacctgtgtgttgtttttcacactc 171
Query: 536 atcattagtactgacagagggcctgtgctaaattcctcttcctctttcttccc 588
||||| ||||| || || || || ||| | |||||||||||||| ||||||||
Sbjct: 170 atcatgagtacagatagtggaccagtgttgaattcctcttcctcattcttccc 118
>gb|DW016473.1|DW016473 EST1225434 MTY Medicago truncatula cDNA clone MTYAH63, mRNA
sequence
Length = 756
Score = 143 bits (72), Expect = 2e-032
Identities = 237/292 (81%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| |||||||||||
Sbjct: 437 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacattttgctgatgaaa 378
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
| ||||||||| || ||| |||||||||| || || || || ||||| || ||||| |||
Sbjct: 377 cgatccttgttgactggctgagccttcttctttcctttaccggtcttaggcacctcagtc 318
Query: 416 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 475
||||| ||||| || || || || ||||| || ||||| | ||||||||| | || |||
Sbjct: 317 cacatttcccggacattttcaagaaccatattgcagtgtctatcaaaagccctgacacgg 258
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
|| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||
Sbjct: 257 cctagaagctttttgttgttacgacaattgatcagaacctgtgtgttgtttttcacactc 198
Query: 536 atcattagtactgacagagggcctgtgctaaattcctcttcctctttcttcc 587
||||| ||||| || || || || ||| | |||||||||||||| |||||||
Sbjct: 197 atcatgagtacagatagtggaccagtgttgaattcctcttcctcattcttcc 146
>gb|BM779378.1|BM779378 EST589954 KV2 Medicago truncatula cDNA clone pKV2-51F16, mRNA
sequence
Length = 544
Score = 141 bits (71), Expect = 9e-032
Identities = 236/291 (81%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| |||||||||||
Sbjct: 351 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacattttgctgatgaaa 292
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
| ||||||||| || ||| |||||||||| || || || || ||||| || ||||| |||
Sbjct: 291 cgatccttgttgactggctgagccttcttctttcctttaccggtcttaggcacctcagtc 232
Query: 416 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 475
||||| ||||| || || || || ||||| || ||||| | ||||||||| | || |||
Sbjct: 231 cacatttcccggacattttcaagaaccatattgcagtgtctatcaaaagccctgacacgg 172
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
|| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||
Sbjct: 171 cctagaagctttttgttgttacgacaattgatcagaacctgtgtgttgtttttcacactc 112
Query: 536 atcattagtactgacagagggcctgtgctaaattcctcttcctctttcttc 586
||||| ||||| || || || || ||| | |||||||||||||| ||||||
Sbjct: 111 atcatgagtacagatagtggaccagtgttgaattcctcttcctcattcttc 61
>gb|CX538446.1|CX538446 s13dNF79E01GS003_460144 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 365
Score = 139 bits (70), Expect = 3e-031
Identities = 208/254 (81%)
Strand = Plus / Minus
Query: 335 aggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgcccttg 394
|||||||| ||||||||||| | ||||||||| || ||| |||||||||| || || ||
Sbjct: 364 aggaacattttgctgatgaaacgatccttgttgactggctgagccttcttctttccttta 305
Query: 395 ccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtgg 454
|| ||||| || ||||| |||||||| ||||| || || || || ||||| || |||||
Sbjct: 304 ccggtcttaggcacctcagtccacatttcccggacattttcaagaaccatattgcagtgt 245
Query: 455 cgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacc 514
| ||||||||| | || ||||| || ||||| |||||||| || |||||||| ||||||
Sbjct: 244 ctatcaaaagccctgacacggcctagaagctttttgttgttacgacaattgatcagaacc 185
Query: 515 tgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctct 574
|| |||||||| || ||||||||||| ||||| || || || || ||| | |||||||||
Sbjct: 184 tgtgtgttgtttttcacactcatcatgagtacagatagtggaccagtgttgaattcctct 125
Query: 575 tcctctttcttccc 588
||||| ||||||||
Sbjct: 124 tcctcattcttccc 111
>gb|BG455780.1|BG455780 NF067D09PL1F1076 Phosphate starved leaf Medicago truncatula cDNA
clone NF067D09PL 5', mRNA sequence
Length = 683
Score = 133 bits (67), Expect = 2e-029
Identities = 207/254 (81%)
Strand = Plus / Minus
Query: 335 aggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgcccttg 394
|||||||| |||||||||| | ||||||||| || ||| |||||||||| || || ||
Sbjct: 361 aggaacattttgctgatganacgatccttgttgactggctgagccttcttctttccttta 302
Query: 395 ccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtgg 454
|| ||||| || ||||| |||||||| ||||| || || || || ||||| || |||||
Sbjct: 301 ccggtcttaggcacctcagtccacatttcccggacattttcaagaaccatattgcagtgt 242
Query: 455 cgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacc 514
| ||||||||| | || ||||| || ||||| |||||||| || |||||||| ||||||
Sbjct: 241 ctatcaaaagccctgacacggcctagaagctttttgttgttacgacaattgatcagaacc 182
Query: 515 tgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctct 574
|| |||||||| || ||||||||||| ||||| || || || || ||| | |||||||||
Sbjct: 181 tgtgtgttgtttttcacactcatcatgagtacagatagtggaccagtgttgaattcctct 122
Query: 575 tcctctttcttccc 588
||||| ||||||||
Sbjct: 121 tcctcattcttccc 108
>gb|AL376211.1|AL376211 MtBB22A12F1 MtBB Medicago truncatula cDNA clone MtBB22A12 T3, mRNA
sequence
Length = 464
Score = 125 bits (63), Expect = 5e-027
Identities = 204/251 (81%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| |||||||||||
Sbjct: 252 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacattttgctgatgaaa 193
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
| ||||||||| || ||| |||||||||| || || || || ||||| || ||||| |||
Sbjct: 192 cgatccttgttgactggctgagccttcttctttcctttaccggtcttaggcacctcagtc 133
Query: 416 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 475
||||| ||||| || || || || ||||| || ||||| | ||||||||| | || |||
Sbjct: 132 cacatttcccggacattttcaagaaccatattgcagtgtctatcaaaagccctgacacgg 73
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
|| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||
Sbjct: 72 cctagaagctttttgttgttacgacaattgatcagaacctgtgtgttgtttttcacactc 13
Query: 536 atcattagtac 546
||||| |||||
Sbjct: 12 atcatgagtac 2
>gb|AJ847442.1|AJ847442 AJ847442 MtSTA Medicago truncatula cDNA clone MtTA01H10S6, mRNA
sequence
Length = 468
Score = 125 bits (63), Expect = 5e-027
Identities = 204/251 (81%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| |||||||||||
Sbjct: 261 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacattttgctgatgaaa 202
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
| ||||||||| || ||| |||||||||| || || || || ||||| || ||||| |||
Sbjct: 201 cgatccttgttgactggctgagccttcttctttcctttaccggtcttaggcacctcagtc 142
Query: 416 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 475
||||| ||||| || || || || ||||| || ||||| | ||||||||| | || |||
Sbjct: 141 cacatttcccggacattttcaagaaccatattgcagtgtctatcaaaagccctgacacgg 82
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
|| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||
Sbjct: 81 cctagaagctttttgttgttacgacaattgatcagaacctgtgtgttgtttttcacactc 22
Query: 536 atcattagtac 546
||||| |||||
Sbjct: 21 atcatgagtac 11
>gb|DW018764.1|DW018764 EST1227725 MTY Medicago truncatula cDNA clone MTYBA66, mRNA
sequence
Length = 754
Score = 123 bits (62), Expect = 2e-026
Identities = 236/293 (80%), Gaps = 2/293 (0%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| ||||||||||
Sbjct: 428 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacat--tgctgatgaaa 371
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
| ||||||||| || ||| |||||||||| || || || || ||||| || ||||| |||
Sbjct: 370 cgatccttgttgactggctgagccttcttctttcctttaccggtcttaggcacctcagtc 311
Query: 416 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 475
||||| ||||| || || || || ||||| || ||||| | ||||||||| | || |||
Sbjct: 310 cacatttcccggacattttcaaggaccatattgcagtgtctatcaaaagccctgacacgg 251
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
|| || ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||
Sbjct: 250 cctagaagctttttgttgttacgacaattgatcagaacctgtgtgttgtttttcacactc 191
Query: 536 atcattagtactgacagagggcctgtgctaaattcctcttcctctttcttccc 588
|||| ||||| || || || || ||| | |||||||||||||| ||||||||
Sbjct: 190 ctcatgagtacagatagtggaccagtgttgaattcctcttcctcattcttccc 138
>gb|BI272395.1|BI272395 NF020H02FL1F1027 Developing flower Medicago truncatula cDNA clone
NF020H02FL 5', mRNA sequence
Length = 354
Score = 103 bits (52), Expect = 2e-020
Identities = 156/191 (81%)
Strand = Plus / Minus
Query: 398 gtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtggcga 457
||||| || ||||| |||||||| ||||| || || || || ||||| || ||||| | |
Sbjct: 347 gtcttaggcacctcagtccacatttcccggacattttcaagaaccatattgcagtgtcta 288
Query: 458 tcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacctgg 517
|||||||| | || ||||| || ||||| |||||||| || |||||||| ||||||||
Sbjct: 287 tcaaaagccctgacacggcctagaagctttttgttgttacgncaattgatcagaacctgt 228
Query: 518 gtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctcttcc 577
|||||||| || ||||||||||| ||||| || || || || ||| | ||||||||||||
Sbjct: 227 gtgttgtttttcacactcatcatgagtacagatagtggaccagtgttgaattcctcttcc 168
Query: 578 tctttcttccc 588
|| ||||||||
Sbjct: 167 tcattcttccc 157
>gb|BG648003.1|BG648003 EST509622 HOGA Medicago truncatula cDNA clone pHOGA-18D13 5' end,
mRNA sequence
Length = 508
Score = 87.7 bits (44), Expect = 1e-015
Identities = 146/180 (81%)
Strand = Plus / Minus
Query: 335 aggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgcccttg 394
|||||||| ||||||||||| | ||||||||| || ||| |||||||||| || || ||
Sbjct: 190 aggaacattttgctgatgaaacgatccttgttgactggctgagccttcttctttccttta 131
Query: 395 ccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtgg 454
|| ||||| || ||||| |||||||| ||||| || || || || ||||| || |||||
Sbjct: 130 ccggtcttaggcacctcagtccacatttcccggacattttcaagaaccatattgcagtgt 71
Query: 455 cgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacc 514
| ||||||||| | || ||||| || ||||| |||||||| || |||||||| ||||||
Sbjct: 70 ctatcaaaagccctgacacggcctagaagctttttgttgttacgacaattgatcagaacc 11
>gb|BF644261.1|BF644261 NF061F08EC1F1074 Elicited cell culture Medicago truncatula cDNA
clone NF061F08EC 5', mRNA sequence
Length = 682
Score = 60.0 bits (30), Expect = 3e-007
Identities = 105/130 (80%)
Strand = Plus / Minus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | || ||||| ||||| ||||||
Sbjct: 428 ttggggttcctaagaacaatgatgacagaatctccacgaagaaacattttgcttatgaat 369
Query: 356 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 415
||||| ||||| || ||| ||||||| || || || || |||||||| || ||||| |||
Sbjct: 368 ctatctttgtttactggctgagcctttttctttcctttaccagtctttggaacctcggtc 309
Query: 416 cacatctccc 425
||||| ||||
Sbjct: 308 cacatttccc 299
>gb|CG942236.1|CG942236 MBEDT39TRC mth2 Medicago truncatula genomic clone 34H6, DNA
sequence
Length = 788
Score = 58.0 bits (29), Expect = 1e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 512 acctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcc 571
||||| |||||||| || ||||||||||| ||||| || || || || ||| | ||||||
Sbjct: 121 acctgtgtgttgtttttcacactcatcatgagtacagatagtggaccagtgttgaattcc 180
Query: 572 tcttcctctttcttccc 588
|||||||| ||||||||
Sbjct: 181 tcttcctcattcttccc 197
>gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete sequence
Length = 151594
Score = 58.0 bits (29), Expect = 1e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 512 acctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcc 571
||||| |||||||| || ||||||||||| ||||| || || || || ||| | ||||||
Sbjct: 121 acctgtgtgttgtttttcacactcatcatgagtacagatagtggaccagtgttgaattcc 180
Query: 572 tcttcctctttcttccc 588
|||||||| ||||||||
Sbjct: 181 tcttcctcattcttccc 197
>gb|AC153350.13| Medicago truncatula clone mth2-77l10, WORKING DRAFT SEQUENCE, 4 ordered
pieces
Length = 110967
Score = 58.0 bits (29), Expect = 1e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 512 acctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcc 571
||||| |||||||| || ||||||||||| ||||| || || || || ||| | ||||||
Sbjct: 99916 acctgtgtgttgtttttcacactcatcatgagtacagatagtggaccagtgttgaattcc 99975
Query: 572 tcttcctctttcttccc 588
|||||||| ||||||||
Sbjct: 99976 tcttcctcattcttccc 99992
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 296 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 355
||||||||||| || || |||||||| || || || | |||||||| |||||||||||
Sbjct: 99503 ttggggttcctaagaacaatgatgacagaatctccacgaaggaacattttgctgatgaaa 99562
Query: 356 ctatccttgttcacaggcagagccttctt 384
| ||||||||| || ||| ||||||||||
Sbjct: 99563 cgatccttgttgactggctgagccttctt 99591
>gb|AC149303.10| Medicago truncatula clone mth2-76a20, complete sequence
Length = 141028
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 566 aattcctcttcctctttcttcc 587
||||||||||||||||||||||
Sbjct: 68388 aattcctcttcctctttcttcc 68409
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 566 aattcctcttcctctttcttcc 587
||||||||||||||||||||||
Sbjct: 58101 aattcctcttcctctttcttcc 58122
>gb|AC148240.28| Medicago truncatula clone mth2-14d9, WORKING DRAFT SEQUENCE, 5 unordered
pieces
Length = 118057
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 566 aattcctcttcctctttcttcc 587
||||||||||||||||||||||
Sbjct: 116945 aattcctcttcctctttcttcc 116966
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 566 aattcctcttcctctttcttcc 587
||||||||||||||||||||||
Sbjct: 104832 aattcctcttcctctttcttcc 104853
>gb|AC149212.22| Medicago truncatula clone mth2-40d11, WORKING DRAFT SEQUENCE, 9
unordered pieces
Length = 85509
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 566 aattcctcttcctctttcttcc 587
||||||||||||||||||||||
Sbjct: 74508 aattcctcttcctctttcttcc 74529
>gb|AC149807.10| Medicago truncatula clone mth2-151h1, WORKING DRAFT SEQUENCE, 11
unordered pieces
Length = 132946
Score = 42.1 bits (21), Expect = 0.061
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 567 attcctcttcctctttcttcc 587
|||||||||||||||||||||
Sbjct: 119 attcctcttcctctttcttcc 99
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 135,150
Number of Sequences: 392609
Number of extensions: 135150
Number of successful extensions: 9798
Number of sequences better than 0.5: 23
Number of HSP's better than 0.5 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9750
Number of HSP's gapped (non-prelim): 46
length of query: 687
length of database: 441,732,993
effective HSP length: 19
effective length of query: 668
effective length of database: 434,273,422
effective search space: 290094645896
effective search space used: 290094645896
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)