BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131572.2.3
(1521 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ500185.1|AJ500185 AJ500185 MTGIM Medicago truncatula c... 56 9e-006
gb|AJ499470.1|AJ499470 AJ499470 MTGIM Medicago truncatula c... 56 9e-006
gb|AJ499175.1|AJ499175 AJ499175 MTGIM Medicago truncatula c... 54 4e-005
gb|AJ500088.1|AJ500088 AJ500088 MTGIM Medicago truncatula c... 50 6e-004
gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula c... 50 6e-004
gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula c... 50 6e-004
gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula c... 50 6e-004
gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 root... 50 6e-004
gb|AJ500060.1|AJ500060 AJ500060 MTGIM Medicago truncatula c... 48 0.002
gb|AJ500111.1|AJ500111 AJ500111 MTGIM Medicago truncatula c... 48 0.002
gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula c... 48 0.002
gb|AJ500539.1|AJ500539 AJ500539 MTGIM Medicago truncatula c... 48 0.002
gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula c... 48 0.002
gb|AJ500823.1|AJ500823 AJ500823 MTGIM Medicago truncatula c... 48 0.002
gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 ... 48 0.002
gb|AJ499522.1|AJ499522 AJ499522 MTGIM Medicago truncatula c... 46 0.009
gb|AJ499688.1|AJ499688 AJ499688 MTGIM Medicago truncatula c... 46 0.009
gb|AJ845902.1|AJ845902 AJ845902 MtSNF Medicago truncatula c... 46 0.009
gb|CG923592.1|CG923592 MBEBS86TRB mth2 Medicago truncatula ... 44 0.034
gb|CG925199.1|CG925199 MBEAP11TRB mth2 Medicago truncatula ... 44 0.034
gb|AJ500456.1|AJ500456 AJ500456 MTGIM Medicago truncatula c... 44 0.034
gb|AJ499618.1|AJ499618 AJ499618 MTGIM Medicago truncatula c... 44 0.034
gb|AJ499720.1|AJ499720 AJ499720 MTGIM Medicago truncatula c... 44 0.034
gb|AJ499808.1|AJ499808 AJ499808 MTGIM Medicago truncatula c... 44 0.034
gb|AJ499960.1|AJ499960 AJ499960 MTGIM Medicago truncatula c... 44 0.034
gb|AJ548142.1|AJ548142 AJ548142 MTAPHEU Medicago truncatula... 44 0.034
gb|AJ548370.1|AJ548370 AJ548370 MTAPHEU Medicago truncatula... 44 0.034
gb|AJ846304.1|AJ846304 AJ846304 MtSCF Medicago truncatula c... 44 0.034
gb|AJ846429.1|AJ846429 AJ846429 MtSCF Medicago truncatula c... 44 0.034
gb|AJ846557.1|AJ846557 AJ846557 MtSCF Medicago truncatula c... 44 0.034
gb|AC156260.10| Medicago truncatula clone mth2-124n5, WORKI... 44 0.034
gb|AC152178.18| Medicago truncatula clone mth2-14b12, WORKI... 44 0.034
gb|AJ502206.1|AJ502206 AJ502206 MTAMP Medicago truncatula c... 42 0.14
gb|AJ500011.1|AJ500011 AJ500011 MTGIM Medicago truncatula c... 42 0.14
gb|AJ500295.1|AJ500295 AJ500295 MTGIM Medicago truncatula c... 42 0.14
gb|AJ500350.1|AJ500350 AJ500350 MTGIM Medicago truncatula c... 42 0.14
gb|AJ500529.1|AJ500529 AJ500529 MTGIM Medicago truncatula c... 42 0.14
gb|AJ500595.1|AJ500595 AJ500595 MTGIM Medicago truncatula c... 42 0.14
gb|AJ500700.1|AJ500700 AJ500700 MTGIM Medicago truncatula c... 42 0.14
gb|AJ499278.1|AJ499278 AJ499278 MTGIM Medicago truncatula c... 42 0.14
gb|AJ499442.1|AJ499442 AJ499442 MTGIM Medicago truncatula c... 42 0.14
gb|AJ499517.1|AJ499517 AJ499517 MTGIM Medicago truncatula c... 42 0.14
gb|AJ499942.1|AJ499942 AJ499942 MTGIM Medicago truncatula c... 42 0.14
gb|AJ499983.1|AJ499983 AJ499983 MTGIM Medicago truncatula c... 42 0.14
gb|AJ499990.1|AJ499990 AJ499990 MTGIM Medicago truncatula c... 42 0.14
gb|AJ547991.1|AJ547991 AJ547991 MTAPHEU Medicago truncatula... 42 0.14
gb|AJ846328.1|AJ846328 AJ846328 MtSCF Medicago truncatula c... 42 0.14
gb|AJ846329.1|AJ846329 AJ846329 MtSCF Medicago truncatula c... 42 0.14
gb|AJ846333.1|AJ846333 AJ846333 MtSCF Medicago truncatula c... 42 0.14
gb|AJ846353.1|AJ846353 AJ846353 MtSCF Medicago truncatula c... 42 0.14
gb|AJ846383.1|AJ846383 AJ846383 MtSCF Medicago truncatula c... 42 0.14
gb|AJ846448.1|AJ846448 AJ846448 MtSCF Medicago truncatula c... 42 0.14
gb|AJ846460.1|AJ846460 AJ846460 MtSCF Medicago truncatula c... 42 0.14
gb|AJ846528.1|AJ846528 AJ846528 MtSCF Medicago truncatula c... 42 0.14
gb|AJ846559.1|AJ846559 AJ846559 MtSCF Medicago truncatula c... 42 0.14
gb|AJ846625.1|AJ846625 AJ846625 MtSN0 Medicago truncatula c... 42 0.14
gb|AJ846631.1|AJ846631 AJ846631 MtSN0 Medicago truncatula c... 42 0.14
gb|AJ846699.1|AJ846699 AJ846699 MtSN0 Medicago truncatula c... 42 0.14
gb|AJ846707.1|AJ846707 AJ846707 MtSN0 Medicago truncatula c... 42 0.14
gb|AJ846710.1|AJ846710 AJ846710 MtSN0 Medicago truncatula c... 42 0.14
gb|AJ846729.1|AJ846729 AJ846729 MtSN0 Medicago truncatula c... 42 0.14
gb|AJ846750.1|AJ846750 AJ846750 MtSN0 Medicago truncatula c... 42 0.14
gb|AJ846778.1|AJ846778 AJ846778 MtSN0 Medicago truncatula c... 42 0.14
gb|AJ846792.1|AJ846792 AJ846792 MtSN0 Medicago truncatula c... 42 0.14
gb|AJ846797.1|AJ846797 AJ846797 MtSN0 Medicago truncatula c... 42 0.14
gb|AJ846812.1|AJ846812 AJ846812 MtSN0 Medicago truncatula c... 42 0.14
gb|AJ846834.1|AJ846834 AJ846834 MtSN0 Medicago truncatula c... 42 0.14
>gb|AJ500185.1|AJ500185 AJ500185 MTGIM Medicago truncatula cDNA clone mtgmacc120013f07, mRNA
sequence
Length = 557
Score = 56.0 bits (28), Expect = 9e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1489 gtccccgcgtacctgcccgggcggccgctcga 1520
|||||||||||||||||||||| |||||||||
Sbjct: 32 gtccccgcgtacctgcccgggcagccgctcga 1
>gb|AJ499470.1|AJ499470 AJ499470 MTGIM Medicago truncatula cDNA clone mtgmacc120004f05, mRNA
sequence
Length = 128
Score = 56.0 bits (28), Expect = 9e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1489 gtccccgcgtacctgcccgggcggccgctcga 1520
||||||||||||||||||||||||||| ||||
Sbjct: 32 gtccccgcgtacctgcccgggcggccgttcga 1
>gb|AJ499175.1|AJ499175 AJ499175 MTGIM Medicago truncatula cDNA clone mtgmacc120001a07, mRNA
sequence
Length = 366
Score = 54.0 bits (27), Expect = 4e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1492 cccgcgtacctgcccgggcggccgctcgaa 1521
||||||||||||||||||||| ||||||||
Sbjct: 337 cccgcgtacctgcccgggcggncgctcgaa 366
>gb|AJ500088.1|AJ500088 AJ500088 MTGIM Medicago truncatula cDNA clone mtgmacc120012e05, mRNA
sequence
Length = 114
Score = 50.1 bits (25), Expect = 6e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1492 cccgcgtacctgcccgggcggccgctcga 1520
|||||||||||||||||||| ||||||||
Sbjct: 29 cccgcgtacctgcccgggcgcccgctcga 1
>gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula cDNA clone mtgmacc120013f03, mRNA
sequence
Length = 614
Score = 50.1 bits (25), Expect = 6e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1496 cgtacctgcccgggcggccgctcga 1520
|||||||||||||||||||||||||
Sbjct: 203 cgtacctgcccgggcggccgctcga 227
>gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula cDNA clone mtgmacc120014h08, mRNA
sequence
Length = 164
Score = 50.1 bits (25), Expect = 6e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1497 gtacctgcccgggcggccgctcgaa 1521
|||||||||||||||||||||||||
Sbjct: 45 gtacctgcccgggcggccgctcgaa 21
>gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula cDNA clone mtgmacc120017g10, mRNA
sequence
Length = 406
Score = 50.1 bits (25), Expect = 6e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1497 gtacctgcccgggcggccgctcgaa 1521
|||||||||||||||||||||||||
Sbjct: 290 gtacctgcccgggcggccgctcgaa 314
>gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 roots Medicago truncatula cDNA clone
MtGmEs470, mRNA sequence
Length = 1151
Score = 50.1 bits (25), Expect = 6e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1497 gtacctgcccgggcggccgctcgaa 1521
|||||||||||||||||||||||||
Sbjct: 297 gtacctgcccgggcggccgctcgaa 273
>gb|AJ500060.1|AJ500060 AJ500060 MTGIM Medicago truncatula cDNA clone mtgmacc120012b04, mRNA
sequence
Length = 366
Score = 48.1 bits (24), Expect = 0.002
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 1489 gtccccgcgtacctgcccgggcggccgctcga 1520
|||||||||||||||||| |||||||||||||
Sbjct: 31 gtccccgcgtacctgccc-ggcggccgctcga 1
>gb|AJ500111.1|AJ500111 AJ500111 MTGIM Medicago truncatula cDNA clone mtgmacc120012g12, mRNA
sequence
Length = 398
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1492 cccgcgtacctgcccgggcggccg 1515
||||||||||||||||||||||||
Sbjct: 374 cccgcgtacctgcccgggcggccg 397
>gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula cDNA clone mtgmacc120014a04, mRNA
sequence
Length = 458
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1497 gtacctgcccgggcggccgctcga 1520
||||||||||||||||||||||||
Sbjct: 300 gtacctgcccgggcggccgctcga 323
>gb|AJ500539.1|AJ500539 AJ500539 MTGIM Medicago truncatula cDNA clone mtgmacc120017e07, mRNA
sequence
Length = 489
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1492 cccgcgtacctgcccgggcggccg 1515
||||||||||||||||||||||||
Sbjct: 27 cccgcgtacctgcccgggcggccg 4
>gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula cDNA clone mtgmacc120019d05, mRNA
sequence
Length = 591
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1497 gtacctgcccgggcggccgctcga 1520
||||||||||||||||||||||||
Sbjct: 339 gtacctgcccgggcggccgctcga 316
>gb|AJ500823.1|AJ500823 AJ500823 MTGIM Medicago truncatula cDNA clone mtgmacc120020f01, mRNA
sequence
Length = 605
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1488 ggtccccgcgtacctgcccgggcg 1511
||||||||||||||||||||||||
Sbjct: 24 ggtccccgcgtacctgcccgggcg 1
>gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs361, mRNA sequence
Length = 593
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1497 gtacctgcccgggcggccgctcga 1520
||||||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgctcga 1
>gb|AJ499522.1|AJ499522 AJ499522 MTGIM Medicago truncatula cDNA clone mtgmacc120005c05, mRNA
sequence
Length = 469
Score = 46.1 bits (23), Expect = 0.009
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 1490 tccccgcgtacctgcccgggcggccgctcga 1520
||||||||||||||||||||| |||||||||
Sbjct: 30 tccccgcgtacctgcccgggc-gccgctcga 1
>gb|AJ499688.1|AJ499688 AJ499688 MTGIM Medicago truncatula cDNA clone mtgmacc120007c09, mRNA
sequence
Length = 335
Score = 46.1 bits (23), Expect = 0.009
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 1490 tccccgcgtacctgcccgggcggccgctcga 1520
||||||||||||||||||||| |||||||||
Sbjct: 30 tccccgcgtacctgcccgggc-gccgctcga 1
>gb|AJ845902.1|AJ845902 AJ845902 MtSNF Medicago truncatula cDNA clone MtNF13D16N2, mRNA
sequence
Length = 213
Score = 46.1 bits (23), Expect = 0.009
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1488 ggtccccgcgtacctgcccgggc 1510
|||||||||||||||||||||||
Sbjct: 191 ggtccccgcgtacctgcccgggc 213
>gb|CG923592.1|CG923592 MBEBS86TRB mth2 Medicago truncatula genomic clone 22P3, DNA
sequence
Length = 873
Score = 44.1 bits (22), Expect = 0.034
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 297 cacacacatacatatatgtatgtaaatatatatgtata 334
||||||||||||||||| ||| || |||||||| ||||
Sbjct: 338 cacacacatacatatatatatatatatatatatatata 301
>gb|CG925199.1|CG925199 MBEAP11TRB mth2 Medicago truncatula genomic clone 14B22, DNA
sequence
Length = 532
Score = 44.1 bits (22), Expect = 0.034
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 297 cacacacatacatatatgtatgtaaatatatatgtata 334
||||||||||||||||| ||| || |||||||| ||||
Sbjct: 338 cacacacatacatatatatatatatatatatatatata 301
>gb|AJ500456.1|AJ500456 AJ500456 MTGIM Medicago truncatula cDNA clone mtgmacc120016f01, mRNA
sequence
Length = 310
Score = 44.1 bits (22), Expect = 0.034
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1492 cccgcgtacctgcccgggcggc 1513
||||||||||||||||||||||
Sbjct: 289 cccgcgtacctgcccgggcggc 310
>gb|AJ499618.1|AJ499618 AJ499618 MTGIM Medicago truncatula cDNA clone mtgmacc120006d04, mRNA
sequence
Length = 173
Score = 44.1 bits (22), Expect = 0.034
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Minus
Query: 1491 ccccgcgtacctgcccgggcggccgctcga 1520
|||||||||||||||||||| |||||||||
Sbjct: 29 ccccgcgtacctgcccgggc-gccgctcga 1
>gb|AJ499720.1|AJ499720 AJ499720 MTGIM Medicago truncatula cDNA clone mtgmacc120007f12, mRNA
sequence
Length = 374
Score = 44.1 bits (22), Expect = 0.034
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1497 gtacctgcccgggcggccgctcgaa 1521
|||||||||||||||| ||||||||
Sbjct: 350 gtacctgcccgggcggncgctcgaa 374
>gb|AJ499808.1|AJ499808 AJ499808 MTGIM Medicago truncatula cDNA clone mtgmacc120008g06, mRNA
sequence
Length = 530
Score = 44.1 bits (22), Expect = 0.034
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Minus
Query: 1491 ccccgcgtacctgcccgggcggccgctcga 1520
|||||||||||||||| |||||||||||||
Sbjct: 29 ccccgcgtacctgccc-ggcggccgctcga 1
>gb|AJ499960.1|AJ499960 AJ499960 MTGIM Medicago truncatula cDNA clone mtgmacc120010g05, mRNA
sequence
Length = 238
Score = 44.1 bits (22), Expect = 0.034
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Minus
Query: 1491 ccccgcgtacctgcccgggcggccgctcga 1520
|||||||||||||||| |||||||||||||
Sbjct: 29 ccccgcgtacctgccc-ggcggccgctcga 1
>gb|AJ548142.1|AJ548142 AJ548142 MTAPHEU Medicago truncatula cDNA clone mtaehac110001e06,
mRNA sequence
Length = 78
Score = 44.1 bits (22), Expect = 0.034
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Minus
Query: 1492 cccgcgtacctgcccgggcggccgctcgaa 1521
||||||||||||||||||| ||||||||||
Sbjct: 41 cccgcgtacctgcccgggc-gccgctcgaa 13
>gb|AJ548370.1|AJ548370 AJ548370 MTAPHEU Medicago truncatula cDNA clone mtaehac110006h05,
mRNA sequence
Length = 518
Score = 44.1 bits (22), Expect = 0.034
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1490 tccccgcgtacctgcccgggcg 1511
||||||||||||||||||||||
Sbjct: 497 tccccgcgtacctgcccgggcg 518
>gb|AJ846304.1|AJ846304 AJ846304 MtSCF Medicago truncatula cDNA clone MtCF01C09S6, mRNA
sequence
Length = 520
Score = 44.1 bits (22), Expect = 0.034
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1489 gtccccgcgtacctgcccgggc 1510
||||||||||||||||||||||
Sbjct: 22 gtccccgcgtacctgcccgggc 1
>gb|AJ846429.1|AJ846429 AJ846429 MtSCF Medicago truncatula cDNA clone MtCF02L13S6, mRNA
sequence
Length = 565
Score = 44.1 bits (22), Expect = 0.034
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1489 gtccccgcgtacctgcccgggc 1510
||||||||||||||||||||||
Sbjct: 22 gtccccgcgtacctgcccgggc 1
>gb|AJ846557.1|AJ846557 AJ846557 MtSCF Medicago truncatula cDNA clone MtCF10A06S6, mRNA
sequence
Length = 633
Score = 44.1 bits (22), Expect = 0.034
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1489 gtccccgcgtacctgcccgggc 1510
||||||||||||||||||||||
Sbjct: 22 gtccccgcgtacctgcccgggc 1
>gb|AC156260.10| Medicago truncatula clone mth2-124n5, WORKING DRAFT SEQUENCE, 10
unordered pieces
Length = 81954
Score = 44.1 bits (22), Expect = 0.034
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 297 cacacacatacatatatgtatgtaaatatatatgtata 334
||||||||||||||||| ||| || |||||||| ||||
Sbjct: 41592 cacacacatacatatatatatatatatatatatatata 41629
>gb|AC152178.18| Medicago truncatula clone mth2-14b12, WORKING DRAFT SEQUENCE, 4 ordered
pieces
Length = 109301
Score = 44.1 bits (22), Expect = 0.034
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 297 cacacacatacatatatgtatgtaaatatatatgtata 334
||||||||||||||||| ||| || |||||||| ||||
Sbjct: 95603 cacacacatacatatatatatatatatatatatatata 95640
>gb|AJ502206.1|AJ502206 AJ502206 MTAMP Medicago truncatula cDNA clone mtgmadc120017h06,
mRNA sequence
Length = 388
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 300 acacatacatatatgtatgta 320
|||||||||||||||||||||
Sbjct: 372 acacatacatatatgtatgta 352
>gb|AJ500011.1|AJ500011 AJ500011 MTGIM Medicago truncatula cDNA clone mtgmacc120011d10, mRNA
sequence
Length = 443
Score = 42.1 bits (21), Expect = 0.14
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Minus
Query: 1492 cccgcgtacctgcccgggcggccgctcga 1520
||||||||||||||| |||||||||||||
Sbjct: 28 cccgcgtacctgccc-ggcggccgctcga 1
>gb|AJ500295.1|AJ500295 AJ500295 MTGIM Medicago truncatula cDNA clone mtgmacc120014h01, mRNA
sequence
Length = 611
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1497 gtacctgcccgggcggccgctcgaa 1521
|||||||||||| ||||||||||||
Sbjct: 33 gtacctgcccggccggccgctcgaa 9
>gb|AJ500350.1|AJ500350 AJ500350 MTGIM Medicago truncatula cDNA clone mtgmacc120015d10, mRNA
sequence
Length = 381
Score = 42.1 bits (21), Expect = 0.14
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Minus
Query: 1492 cccgcgtacctgcccgggcggccgctcga 1520
||||||||||||||| |||||||||||||
Sbjct: 28 cccgcgtacctgccc-ggcggccgctcga 1
>gb|AJ500529.1|AJ500529 AJ500529 MTGIM Medicago truncatula cDNA clone mtgmacc120017d07, mRNA
sequence
Length = 557
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1497 gtacctgcccgggcggccgctcgaa 1521
|||||||||||| ||||||||||||
Sbjct: 533 gtacctgcccggacggccgctcgaa 557
>gb|AJ500595.1|AJ500595 AJ500595 MTGIM Medicago truncatula cDNA clone mtgmacc120018b05, mRNA
sequence
Length = 381
Score = 42.1 bits (21), Expect = 0.14
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Minus
Query: 1492 cccgcgtacctgcccgggcggccgctcga 1520
||||||||||||||||||| |||||||||
Sbjct: 28 cccgcgtacctgcccgggc-gccgctcga 1
>gb|AJ500700.1|AJ500700 AJ500700 MTGIM Medicago truncatula cDNA clone mtgmacc120019c06, mRNA
sequence
Length = 451
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1497 gtacctgcccgggcggccgctcgaa 1521
||||||||||||||||||| |||||
Sbjct: 427 gtacctgcccgggcggccgttcgaa 451
>gb|AJ499278.1|AJ499278 AJ499278 MTGIM Medicago truncatula cDNA clone mtgmacc120002b11, mRNA
sequence
Length = 438
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1497 gtacctgcccgggcggccgctcgaa 1521
|||||||||||||||| ||||||||
Sbjct: 414 gtacctgcccgggcggtcgctcgaa 438
>gb|AJ499442.1|AJ499442 AJ499442 MTGIM Medicago truncatula cDNA clone mtgmacc120004c11, mRNA
sequence
Length = 430
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1497 gtacctgcccgggcggccgctcgaa 1521
|||||||||||||||| ||||||||
Sbjct: 406 gtacctgcccgggcggacgctcgaa 430
>gb|AJ499517.1|AJ499517 AJ499517 MTGIM Medicago truncatula cDNA clone mtgmacc120005b12, mRNA
sequence
Length = 321
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1497 gtacctgcccgggcggccgctcgaa 1521
|||||||||||||||| ||||||||
Sbjct: 297 gtacctgcccgggcggacgctcgaa 321
>gb|AJ499942.1|AJ499942 AJ499942 MTGIM Medicago truncatula cDNA clone mtgmacc120010e04, mRNA
sequence
Length = 527
Score = 42.1 bits (21), Expect = 0.14
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1497 gtacctgcccgggcggccgctcga 1520
|||||||||||||||| |||||||
Sbjct: 504 gtacctgcccgggcggncgctcga 527
>gb|AJ499983.1|AJ499983 AJ499983 MTGIM Medicago truncatula cDNA clone mtgmacc120011b01, mRNA
sequence
Length = 381
Score = 42.1 bits (21), Expect = 0.14
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Minus
Query: 1492 cccgcgtacctgcccgggcggccgctcga 1520
||||||||||||||| |||||||||||||
Sbjct: 28 cccgcgtacctgccc-ggcggccgctcga 1
>gb|AJ499990.1|AJ499990 AJ499990 MTGIM Medicago truncatula cDNA clone mtgmacc120011b09, mRNA
sequence
Length = 314
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1497 gtacctgcccgggcggccgctcgaa 1521
|||||||||||||||| ||||||||
Sbjct: 290 gtacctgcccgggcggacgctcgaa 314
>gb|AJ547991.1|AJ547991 AJ547991 MTAPHEU Medicago truncatula cDNA clone mtaehac110005g06,
mRNA sequence
Length = 590
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1491 ccccgcgtacctgcccgggcg 1511
|||||||||||||||||||||
Sbjct: 570 ccccgcgtacctgcccgggcg 590
>gb|AJ846328.1|AJ846328 AJ846328 MtSCF Medicago truncatula cDNA clone MtCF01H08S6, mRNA
sequence
Length = 488
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1490 tccccgcgtacctgcccgggc 1510
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846329.1|AJ846329 AJ846329 MtSCF Medicago truncatula cDNA clone MtCF01H21S6, mRNA
sequence
Length = 481
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1490 tccccgcgtacctgcccgggc 1510
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846333.1|AJ846333 AJ846333 MtSCF Medicago truncatula cDNA clone MtCF01I19S6, mRNA
sequence
Length = 295
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1490 tccccgcgtacctgcccgggc 1510
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846353.1|AJ846353 AJ846353 MtSCF Medicago truncatula cDNA clone MtCF01M22S6, mRNA
sequence
Length = 435
Score = 42.1 bits (21), Expect = 0.14
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1490 tccccgcgtacctgcccgggc 1510
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 280,841
Number of Sequences: 392609
Number of extensions: 280841
Number of successful extensions: 21318
Number of sequences better than 0.5: 67
Number of HSP's better than 0.5 without gapping: 59
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 21232
Number of HSP's gapped (non-prelim): 88
length of query: 1521
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1501
effective length of database: 433,880,813
effective search space: 651255100313
effective search space used: 651255100313
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)