BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.654
(682 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ499470.1|AJ499470 AJ499470 MTGIM Medicago truncatula c... 54 2e-005
gb|AJ500823.1|AJ500823 AJ500823 MTGIM Medicago truncatula c... 50 2e-004
gb|AJ500111.1|AJ500111 AJ500111 MTGIM Medicago truncatula c... 48 0.001
gb|AJ500185.1|AJ500185 AJ500185 MTGIM Medicago truncatula c... 48 0.001
gb|AJ500539.1|AJ500539 AJ500539 MTGIM Medicago truncatula c... 48 0.001
gb|AJ845902.1|AJ845902 AJ845902 MtSNF Medicago truncatula c... 48 0.001
gb|AJ500456.1|AJ500456 AJ500456 MTGIM Medicago truncatula c... 44 0.015
gb|AJ499175.1|AJ499175 AJ499175 MTGIM Medicago truncatula c... 44 0.015
gb|AJ499522.1|AJ499522 AJ499522 MTGIM Medicago truncatula c... 44 0.015
gb|AJ499688.1|AJ499688 AJ499688 MTGIM Medicago truncatula c... 44 0.015
gb|AJ548370.1|AJ548370 AJ548370 MTAPHEU Medicago truncatula... 44 0.015
gb|AJ846304.1|AJ846304 AJ846304 MtSCF Medicago truncatula c... 44 0.015
gb|AJ846429.1|AJ846429 AJ846429 MtSCF Medicago truncatula c... 44 0.015
gb|AJ846557.1|AJ846557 AJ846557 MtSCF Medicago truncatula c... 44 0.015
gb|CG956582.1|CG956582 MBEAF74TF mth2 Medicago truncatula g... 42 0.060
gb|AW697253.1|AW697253 NF113G11ST1F1087 Developing stem Med... 42 0.060
gb|BE204150.1|BE204150 EST396818 KV0 Medicago truncatula cD... 42 0.060
gb|BF633271.1|BF633271 NF046D06DT1F1058 Drought Medicago tr... 42 0.060
gb|BE324499.2|BE324499 NF020G10PL1F1081 Phosphate starved l... 42 0.060
gb|BG450647.1|BG450647 NF096E11DT1F1085 Drought Medicago tr... 42 0.060
gb|BG451769.1|BG451769 NF094G04DT1F1033 Drought Medicago tr... 42 0.060
gb|AJ498592.1|AJ498592 AJ498592 MTPOSE Medicago truncatula ... 42 0.060
gb|CF068508.1|CF068508 EST669229 MTUS Medicago truncatula c... 42 0.060
gb|AJ500088.1|AJ500088 AJ500088 MTGIM Medicago truncatula c... 42 0.060
gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula c... 42 0.060
gb|AJ499618.1|AJ499618 AJ499618 MTGIM Medicago truncatula c... 42 0.060
gb|AJ547991.1|AJ547991 AJ547991 MTAPHEU Medicago truncatula... 42 0.060
gb|AJ846328.1|AJ846328 AJ846328 MtSCF Medicago truncatula c... 42 0.060
gb|AJ846329.1|AJ846329 AJ846329 MtSCF Medicago truncatula c... 42 0.060
gb|AJ846333.1|AJ846333 AJ846333 MtSCF Medicago truncatula c... 42 0.060
gb|AJ846353.1|AJ846353 AJ846353 MtSCF Medicago truncatula c... 42 0.060
gb|AJ846383.1|AJ846383 AJ846383 MtSCF Medicago truncatula c... 42 0.060
gb|AJ846448.1|AJ846448 AJ846448 MtSCF Medicago truncatula c... 42 0.060
gb|AJ846460.1|AJ846460 AJ846460 MtSCF Medicago truncatula c... 42 0.060
gb|AJ846528.1|AJ846528 AJ846528 MtSCF Medicago truncatula c... 42 0.060
gb|AJ846559.1|AJ846559 AJ846559 MtSCF Medicago truncatula c... 42 0.060
gb|AJ846625.1|AJ846625 AJ846625 MtSN0 Medicago truncatula c... 42 0.060
gb|AJ846631.1|AJ846631 AJ846631 MtSN0 Medicago truncatula c... 42 0.060
gb|AJ846699.1|AJ846699 AJ846699 MtSN0 Medicago truncatula c... 42 0.060
gb|AJ846707.1|AJ846707 AJ846707 MtSN0 Medicago truncatula c... 42 0.060
gb|AJ846710.1|AJ846710 AJ846710 MtSN0 Medicago truncatula c... 42 0.060
gb|AJ846729.1|AJ846729 AJ846729 MtSN0 Medicago truncatula c... 42 0.060
gb|AJ846750.1|AJ846750 AJ846750 MtSN0 Medicago truncatula c... 42 0.060
gb|AJ846778.1|AJ846778 AJ846778 MtSN0 Medicago truncatula c... 42 0.060
gb|AJ846792.1|AJ846792 AJ846792 MtSN0 Medicago truncatula c... 42 0.060
gb|AJ846797.1|AJ846797 AJ846797 MtSN0 Medicago truncatula c... 42 0.060
gb|AJ846812.1|AJ846812 AJ846812 MtSN0 Medicago truncatula c... 42 0.060
gb|AJ846834.1|AJ846834 AJ846834 MtSN0 Medicago truncatula c... 42 0.060
gb|CX525427.1|CX525427 s13dNF21A07AT053_479488 Aphid-Infect... 42 0.060
gb|DW018105.1|DW018105 EST1227066 MTY Medicago truncatula c... 42 0.060
emb|CR936325.2| Medicago truncatula chromosome 5 clone mth2... 42 0.060
gb|AC153129.20| Medicago truncatula clone mth2-103o2, compl... 42 0.060
gb|AJ500043.1|AJ500043 AJ500043 MTGIM Medicago truncatula c... 40 0.24
gb|AJ500052.1|AJ500052 AJ500052 MTGIM Medicago truncatula c... 40 0.24
gb|AJ500060.1|AJ500060 AJ500060 MTGIM Medicago truncatula c... 40 0.24
gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula c... 40 0.24
gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula c... 40 0.24
gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula c... 40 0.24
gb|AJ500595.1|AJ500595 AJ500595 MTGIM Medicago truncatula c... 40 0.24
gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula c... 40 0.24
gb|AJ499717.1|AJ499717 AJ499717 MTGIM Medicago truncatula c... 40 0.24
gb|AJ499909.1|AJ499909 AJ499909 MTGIM Medicago truncatula c... 40 0.24
gb|AJ548052.1|AJ548052 AJ548052 MTAPHEU Medicago truncatula... 40 0.24
gb|AJ548142.1|AJ548142 AJ548142 MTAPHEU Medicago truncatula... 40 0.24
gb|AJ846298.1|AJ846298 AJ846298 MtSCF Medicago truncatula c... 40 0.24
gb|AJ846302.1|AJ846302 AJ846302 MtSCF Medicago truncatula c... 40 0.24
gb|AJ846340.1|AJ846340 AJ846340 MtSCF Medicago truncatula c... 40 0.24
gb|AJ846354.1|AJ846354 AJ846354 MtSCF Medicago truncatula c... 40 0.24
gb|AJ846376.1|AJ846376 AJ846376 MtSCF Medicago truncatula c... 40 0.24
gb|AJ846390.1|AJ846390 AJ846390 MtSCF Medicago truncatula c... 40 0.24
gb|AJ846446.1|AJ846446 AJ846446 MtSCF Medicago truncatula c... 40 0.24
gb|AJ846468.1|AJ846468 AJ846468 MtSCF Medicago truncatula c... 40 0.24
gb|AJ846496.1|AJ846496 AJ846496 MtSCF Medicago truncatula c... 40 0.24
gb|AJ846544.1|AJ846544 AJ846544 MtSCF Medicago truncatula c... 40 0.24
gb|AJ846671.1|AJ846671 AJ846671 MtSN0 Medicago truncatula c... 40 0.24
gb|AJ846685.1|AJ846685 AJ846685 MtSN0 Medicago truncatula c... 40 0.24
gb|AJ846691.1|AJ846691 AJ846691 MtSN0 Medicago truncatula c... 40 0.24
gb|AJ846716.1|AJ846716 AJ846716 MtSN0 Medicago truncatula c... 40 0.24
gb|AJ846760.1|AJ846760 AJ846760 MtSN0 Medicago truncatula c... 40 0.24
gb|AJ848580.1|AJ848580 AJ848580 MtSN4 Medicago truncatula c... 40 0.24
gb|AJ848660.1|AJ848660 AJ848660 MtSN4 Medicago truncatula c... 40 0.24
gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 root... 40 0.24
gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 ... 40 0.24
gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone m... 40 0.24
gb|AC122167.8| Medicago truncatula clone mth1-10d10, comple... 40 0.24
>gb|AJ499470.1|AJ499470 AJ499470 MTGIM Medicago truncatula cDNA clone mtgmacc120004f05,
mRNA sequence
Length = 128
Score = 54.0 bits (27), Expect = 2e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 655 gtccccgcgtacctgcccgggcggccg 681
|||||||||||||||||||||||||||
Sbjct: 32 gtccccgcgtacctgcccgggcggccg 6
>gb|AJ500823.1|AJ500823 AJ500823 MTGIM Medicago truncatula cDNA clone mtgmacc120020f01,
mRNA sequence
Length = 605
Score = 50.1 bits (25), Expect = 2e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 653 tggtccccgcgtacctgcccgggcg 677
|||||||||||||||||||||||||
Sbjct: 25 tggtccccgcgtacctgcccgggcg 1
>gb|AJ500111.1|AJ500111 AJ500111 MTGIM Medicago truncatula cDNA clone mtgmacc120012g12,
mRNA sequence
Length = 398
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 658 cccgcgtacctgcccgggcggccg 681
||||||||||||||||||||||||
Sbjct: 374 cccgcgtacctgcccgggcggccg 397
>gb|AJ500185.1|AJ500185 AJ500185 MTGIM Medicago truncatula cDNA clone mtgmacc120013f07,
mRNA sequence
Length = 557
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 655 gtccccgcgtacctgcccgggcggccgc 682
|||||||||||||||||||||| |||||
Sbjct: 32 gtccccgcgtacctgcccgggcagccgc 5
>gb|AJ500539.1|AJ500539 AJ500539 MTGIM Medicago truncatula cDNA clone mtgmacc120017e07,
mRNA sequence
Length = 489
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 658 cccgcgtacctgcccgggcggccg 681
||||||||||||||||||||||||
Sbjct: 27 cccgcgtacctgcccgggcggccg 4
>gb|AJ845902.1|AJ845902 AJ845902 MtSNF Medicago truncatula cDNA clone MtNF13D16N2, mRNA
sequence
Length = 213
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 653 tggtccccgcgtacctgcccgggc 676
||||||||||||||||||||||||
Sbjct: 190 tggtccccgcgtacctgcccgggc 213
>gb|AJ500456.1|AJ500456 AJ500456 MTGIM Medicago truncatula cDNA clone mtgmacc120016f01,
mRNA sequence
Length = 310
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 658 cccgcgtacctgcccgggcggc 679
||||||||||||||||||||||
Sbjct: 289 cccgcgtacctgcccgggcggc 310
>gb|AJ499175.1|AJ499175 AJ499175 MTGIM Medicago truncatula cDNA clone mtgmacc120001a07,
mRNA sequence
Length = 366
Score = 44.1 bits (22), Expect = 0.015
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 658 cccgcgtacctgcccgggcggccgc 682
||||||||||||||||||||| |||
Sbjct: 337 cccgcgtacctgcccgggcggncgc 361
>gb|AJ499522.1|AJ499522 AJ499522 MTGIM Medicago truncatula cDNA clone mtgmacc120005c05,
mRNA sequence
Length = 469
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggcg 677
||||||||||||||||||||||
Sbjct: 30 tccccgcgtacctgcccgggcg 9
>gb|AJ499688.1|AJ499688 AJ499688 MTGIM Medicago truncatula cDNA clone mtgmacc120007c09,
mRNA sequence
Length = 335
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggcg 677
||||||||||||||||||||||
Sbjct: 30 tccccgcgtacctgcccgggcg 9
>gb|AJ548370.1|AJ548370 AJ548370 MTAPHEU Medicago truncatula cDNA clone mtaehac110006h05,
mRNA sequence
Length = 518
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 656 tccccgcgtacctgcccgggcg 677
||||||||||||||||||||||
Sbjct: 497 tccccgcgtacctgcccgggcg 518
>gb|AJ846304.1|AJ846304 AJ846304 MtSCF Medicago truncatula cDNA clone MtCF01C09S6, mRNA
sequence
Length = 520
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 655 gtccccgcgtacctgcccgggc 676
||||||||||||||||||||||
Sbjct: 22 gtccccgcgtacctgcccgggc 1
>gb|AJ846429.1|AJ846429 AJ846429 MtSCF Medicago truncatula cDNA clone MtCF02L13S6, mRNA
sequence
Length = 565
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 655 gtccccgcgtacctgcccgggc 676
||||||||||||||||||||||
Sbjct: 22 gtccccgcgtacctgcccgggc 1
>gb|AJ846557.1|AJ846557 AJ846557 MtSCF Medicago truncatula cDNA clone MtCF10A06S6, mRNA
sequence
Length = 633
Score = 44.1 bits (22), Expect = 0.015
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 655 gtccccgcgtacctgcccgggc 676
||||||||||||||||||||||
Sbjct: 22 gtccccgcgtacctgcccgggc 1
>gb|CG956582.1|CG956582 MBEAF74TF mth2 Medicago truncatula genomic clone 12M4, DNA sequence
Length = 809
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 636 tcctcctcttcctcttcctct 656
>gb|AW697253.1|AW697253 NF113G11ST1F1087 Developing stem Medicago truncatula cDNA clone
NF113G11ST 5', mRNA sequence
Length = 761
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 162 tcctcctcttcctcttcctct 142
>gb|BE204150.1|BE204150 EST396818 KV0 Medicago truncatula cDNA clone pKV0-14J23, mRNA
sequence
Length = 543
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 170 tcctcctcttcctcttcctct 150
>gb|BF633271.1|BF633271 NF046D06DT1F1058 Drought Medicago truncatula cDNA clone NF046D06DT
5', mRNA sequence
Length = 463
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 78 tcctcctcttcctcttcctct 58
>gb|BE324499.2|BE324499 NF020G10PL1F1081 Phosphate starved leaf Medicago truncatula cDNA
clone NF020G10PL 5', mRNA sequence
Length = 371
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 85 tcctcctcttcctcttcctct 65
>gb|BG450647.1|BG450647 NF096E11DT1F1085 Drought Medicago truncatula cDNA clone NF096E11DT
5', mRNA sequence
Length = 678
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 84 tcctcctcttcctcttcctct 64
>gb|BG451769.1|BG451769 NF094G04DT1F1033 Drought Medicago truncatula cDNA clone NF094G04DT
5', mRNA sequence
Length = 606
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 78 tcctcctcttcctcttcctct 58
>gb|AJ498592.1|AJ498592 AJ498592 MTPOSE Medicago truncatula cDNA clone mt--acc955206e05,
mRNA sequence
Length = 655
Score = 42.1 bits (21), Expect = 0.060
Identities = 69/85 (81%)
Strand = Plus / Minus
Query: 443 ctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagcaggaca 502
||||| ||||||||||| ||||||| || ||||| ||| | || | ||||| || ||
Sbjct: 280 ctgtgtcccacatcttcaaaatcattagttgcatctttgcctgttgcagacaacaaaacc 221
Query: 503 tcatcacctccagggtggtcctcca 527
|||||||||||||| || |||||||
Sbjct: 220 tcatcacctccaggatgatcctcca 196
>gb|CF068508.1|CF068508 EST669229 MTUS Medicago truncatula cDNA clone MTUS-8H4, mRNA
sequence
Length = 198
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 103 tcctcctcttcctcttcctct 83
>gb|AJ500088.1|AJ500088 AJ500088 MTGIM Medicago truncatula cDNA clone mtgmacc120012e05,
mRNA sequence
Length = 114
Score = 42.1 bits (21), Expect = 0.060
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 658 cccgcgtacctgcccgggcggccgc 682
|||||||||||||||||||| ||||
Sbjct: 29 cccgcgtacctgcccgggcgcccgc 5
>gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula cDNA clone mtgmacc120013f03,
mRNA sequence
Length = 614
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 662 cgtacctgcccgggcggccgc 682
|||||||||||||||||||||
Sbjct: 203 cgtacctgcccgggcggccgc 223
>gb|AJ499618.1|AJ499618 AJ499618 MTGIM Medicago truncatula cDNA clone mtgmacc120006d04,
mRNA sequence
Length = 173
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 657 ccccgcgtacctgcccgggcg 677
|||||||||||||||||||||
Sbjct: 29 ccccgcgtacctgcccgggcg 9
>gb|AJ547991.1|AJ547991 AJ547991 MTAPHEU Medicago truncatula cDNA clone mtaehac110005g06,
mRNA sequence
Length = 590
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 657 ccccgcgtacctgcccgggcg 677
|||||||||||||||||||||
Sbjct: 570 ccccgcgtacctgcccgggcg 590
>gb|AJ846328.1|AJ846328 AJ846328 MtSCF Medicago truncatula cDNA clone MtCF01H08S6, mRNA
sequence
Length = 488
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846329.1|AJ846329 AJ846329 MtSCF Medicago truncatula cDNA clone MtCF01H21S6, mRNA
sequence
Length = 481
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846333.1|AJ846333 AJ846333 MtSCF Medicago truncatula cDNA clone MtCF01I19S6, mRNA
sequence
Length = 295
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846353.1|AJ846353 AJ846353 MtSCF Medicago truncatula cDNA clone MtCF01M22S6, mRNA
sequence
Length = 435
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846383.1|AJ846383 AJ846383 MtSCF Medicago truncatula cDNA clone MtCF02D12S6, mRNA
sequence
Length = 575
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846448.1|AJ846448 AJ846448 MtSCF Medicago truncatula cDNA clone MtCF02P17S6, mRNA
sequence
Length = 296
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846460.1|AJ846460 AJ846460 MtSCF Medicago truncatula cDNA clone MtCF04B23S6, mRNA
sequence
Length = 745
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846528.1|AJ846528 AJ846528 MtSCF Medicago truncatula cDNA clone MtCF05P02S6, mRNA
sequence
Length = 617
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846559.1|AJ846559 AJ846559 MtSCF Medicago truncatula cDNA clone MtCF10A19S6, mRNA
sequence
Length = 822
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846625.1|AJ846625 AJ846625 MtSN0 Medicago truncatula cDNA clone MtN002J14S6, mRNA
sequence
Length = 248
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846631.1|AJ846631 AJ846631 MtSN0 Medicago truncatula cDNA clone MtN002K14S6, mRNA
sequence
Length = 536
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846699.1|AJ846699 AJ846699 MtSN0 Medicago truncatula cDNA clone MtN003M24S6, mRNA
sequence
Length = 753
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846707.1|AJ846707 AJ846707 MtSN0 Medicago truncatula cDNA clone MtN003P02S6, mRNA
sequence
Length = 391
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846710.1|AJ846710 AJ846710 MtSN0 Medicago truncatula cDNA clone MtN004C14S6, mRNA
sequence
Length = 628
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846729.1|AJ846729 AJ846729 MtSN0 Medicago truncatula cDNA clone MtN005E15S6, mRNA
sequence
Length = 388
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846750.1|AJ846750 AJ846750 MtSN0 Medicago truncatula cDNA clone MtN009N03S6, mRNA
sequence
Length = 143
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846778.1|AJ846778 AJ846778 MtSN0 Medicago truncatula cDNA clone MtN010G19S6, mRNA
sequence
Length = 666
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846792.1|AJ846792 AJ846792 MtSN0 Medicago truncatula cDNA clone MtN010J14S6, mRNA
sequence
Length = 463
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846797.1|AJ846797 AJ846797 MtSN0 Medicago truncatula cDNA clone MtN010K03S6, mRNA
sequence
Length = 214
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846812.1|AJ846812 AJ846812 MtSN0 Medicago truncatula cDNA clone MtN010P24S6, mRNA
sequence
Length = 176
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|AJ846834.1|AJ846834 AJ846834 MtSN0 Medicago truncatula cDNA clone MtN011K05S6, mRNA
sequence
Length = 182
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 656 tccccgcgtacctgcccgggc 676
|||||||||||||||||||||
Sbjct: 21 tccccgcgtacctgcccgggc 1
>gb|CX525427.1|CX525427 s13dNF21A07AT053_479488 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 564
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 75 tcctcctcttcctcttcctct 55
>gb|DW018105.1|DW018105 EST1227066 MTY Medicago truncatula cDNA clone MTYB232, mRNA
sequence
Length = 863
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 62 tcctcctcttcctcttcctct 42
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 158,676
Number of Sequences: 392609
Number of extensions: 158676
Number of successful extensions: 15330
Number of sequences better than 0.5: 87
Number of HSP's better than 0.5 without gapping: 86
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 15217
Number of HSP's gapped (non-prelim): 113
length of query: 682
length of database: 441,732,993
effective HSP length: 19
effective length of query: 663
effective length of database: 434,273,422
effective search space: 287923278786
effective search space used: 287923278786
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)