BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.462
(823 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA919240.1|CA919240 EST636958 MTUS Medicago truncatula c... 98 1e-018
gb|CA990584.1|CA990584 EST644092 GESD Medicago truncatula c... 98 1e-018
gb|CF068658.1|CF068658 EST669379 MTUS Medicago truncatula c... 98 1e-018
gb|AJ547987.1|AJ547987 AJ547987 MTAPHEU Medicago truncatula... 98 1e-018
gb|BI270971.1|BI270971 NF001C04FL1F1034 Developing flower M... 90 3e-016
gb|CX539592.1|CX539592 s13dNF65G03GS020_462446 Germinating ... 90 3e-016
gb|AW559863.1|AW559863 EST314911 DSIR Medicago truncatula c... 76 5e-012
gb|AL378446.1|AL378446 MtBB38C08F1 MtBB Medicago truncatula... 76 5e-012
gb|AL378447.1|AL378447 MtBB38C09F1 MtBB Medicago truncatula... 76 5e-012
gb|AL378448.1|AL378448 MtBB38C09R1 MtBB Medicago truncatula... 76 5e-012
gb|CA919136.1|CA919136 EST636854 MTUS Medicago truncatula c... 76 5e-012
gb|CF068462.1|CF068462 EST669183 MTUS Medicago truncatula c... 76 5e-012
gb|AJ547979.1|AJ547979 AJ547979 MTAPHEU Medicago truncatula... 76 5e-012
gb|AQ841133.1|AQ841133 T132102b Medicago truncatula BAC lib... 68 1e-009
gb|CG963694.1|CG963694 MBEMG15TF mth2 Medicago truncatula g... 68 1e-009
gb|AA660317.1|AA660317 00188 MtRHE Medicago truncatula cDNA... 68 1e-009
gb|AW685911.1|AW685911 NF031F10NR1F1000 Nodulated root Medi... 68 1e-009
gb|AW287963.2|AW287963 N100807e rootphos(-) Medicago trunca... 68 1e-009
gb|AW775272.1|AW775272 EST334337 DSIL Medicago truncatula c... 68 1e-009
gb|BE123986.1|BE123986 EST394111 DSIL Medicago truncatula c... 68 1e-009
gb|AL378417.1|AL378417 MtBB38B03F1 MtBB Medicago truncatula... 68 1e-009
gb|AL378418.1|AL378418 MtBB38B03R1 MtBB Medicago truncatula... 68 1e-009
gb|AL385399.1|AL385399 MtBC28D03F1 MtBC Medicago truncatula... 68 1e-009
gb|AL385400.1|AL385400 MtBC28D03R1 MtBC Medicago truncatula... 68 1e-009
gb|BF634248.1|BF634248 NF084C11DT1F1085 Drought Medicago tr... 68 1e-009
gb|BF634808.1|BF634808 NF075B04DT1F1032 Drought Medicago tr... 68 1e-009
gb|BF637309.1|BF637309 NF072C05LF1F1035 Developing leaf Med... 68 1e-009
gb|BF650625.1|BF650625 NF095A07EC1F1051 Elicited cell cultu... 68 1e-009
gb|BG457309.1|BG457309 NF103C08PL1F1056 Phosphate starved l... 68 1e-009
gb|BG581393.1|BG581393 EST483126 GVN Medicago truncatula cD... 68 1e-009
gb|BI269843.1|BI269843 NF010F09IR1F1078 Irradiated Medicago... 68 1e-009
gb|BI311742.1|BI311742 EST5313492 GESD Medicago truncatula ... 68 1e-009
gb|BQ139420.1|BQ139420 NF015A11PH1F1085 Phoma-infected Medi... 68 1e-009
gb|BQ148106.1|BQ148106 NF058G06FL1F1052 Developing flower M... 68 1e-009
gb|AJ501345.1|AJ501345 AJ501345 MTAMP Medicago truncatula c... 68 1e-009
gb|AJ502204.1|AJ502204 AJ502204 MTAMP Medicago truncatula c... 68 1e-009
gb|AJ503206.1|AJ503206 AJ503206 MTAMP Medicago truncatula c... 68 1e-009
gb|AJ503287.1|AJ503287 AJ503287 MTAMP Medicago truncatula c... 68 1e-009
gb|AJ498470.1|AJ498470 AJ498470 MTPOSE Medicago truncatula ... 68 1e-009
gb|CA991103.1|CA991103 EST644611 GESD Medicago truncatula c... 68 1e-009
gb|CB894541.1|CB894541 EST647333 HOGA Medicago truncatula c... 68 1e-009
gb|CF069414.1|CF069414 EST670135 MTUS Medicago truncatula c... 68 1e-009
gb|AJ846381.1|AJ846381 AJ846381 MtSCF Medicago truncatula c... 68 1e-009
gb|CX539624.1|CX539624 s13dNF66B07GS057_462514 Germinating ... 68 1e-009
gb|CX542562.1|CX542562 s13dNF57H03GS032_474342 Germinating ... 68 1e-009
gb|AC134242.17| Medicago truncatula clone mth2-10p20, compl... 68 1e-009
gb|AC139841.14| Medicago truncatula clone mth2-35g18, WORKI... 68 1e-009
gb|AC146745.19| Medicago truncatula clone mth2-53p19, compl... 68 1e-009
gb|AC174297.7| Medicago truncatula clone mth2-73p24, WORKIN... 68 1e-009
gb|BG450237.1|BG450237 NF012D12DT1F1102 Drought Medicago tr... 64 2e-008
gb|BI312347.1|BI312347 EST5314097 GESD Medicago truncatula ... 64 2e-008
gb|AJ846334.1|AJ846334 AJ846334 MtSCF Medicago truncatula c... 64 2e-008
gb|AJ846440.1|AJ846440 AJ846440 MtSCF Medicago truncatula c... 64 2e-008
gb|AJ846529.1|AJ846529 AJ846529 MtSCF Medicago truncatula c... 64 2e-008
gb|CG950710.1|CG950710 MBEGP60TR mth2 Medicago truncatula g... 62 8e-008
gb|BF006241.1|BF006241 EST434739 DSLC Medicago truncatula c... 62 8e-008
gb|BE324737.2|BE324737 NF017F09PL1F1076 Phosphate starved l... 62 8e-008
gb|BI311392.1|BI311392 EST5313142 GESD Medicago truncatula ... 62 8e-008
gb|AJ497096.1|AJ497096 AJ497096 MTFLOW Medicago truncatula ... 62 8e-008
gb|CA990778.1|CA990778 EST644286 GESD Medicago truncatula c... 62 8e-008
gb|AJ548256.1|AJ548256 AJ548256 MTAPHEU Medicago truncatula... 62 8e-008
gb|BE205120.1|BE205120 EST397796 KV0 Medicago truncatula cD... 60 3e-007
gb|AJ847102.1|AJ847102 AJ847102 MtSTW Medicago truncatula c... 60 3e-007
gb|CG959739.1|CG959739 MBENS50TR mth2 Medicago truncatula g... 58 1e-006
gb|AW776380.1|AW776380 EST335445 DSIL Medicago truncatula c... 58 1e-006
gb|BE318436.1|BE318436 NF038E12LF1F1088 Developing leaf Med... 58 1e-006
gb|AL386747.1|AL386747 MtBC36F02F1 MtBC Medicago truncatula... 58 1e-006
gb|AL386748.1|AL386748 MtBC36F02R1 MtBC Medicago truncatula... 58 1e-006
gb|BF005761.1|BF005761 EST434259 DSLC Medicago truncatula c... 58 1e-006
gb|BG646864.1|BG646864 EST508483 HOGA Medicago truncatula c... 58 1e-006
gb|CA920455.1|CA920455 EST638173 MTUS Medicago truncatula c... 58 1e-006
gb|CX541142.1|CX541142 s13dNF77H10GS092_465578 Germinating ... 58 1e-006
gb|DW016996.1|DW016996 EST1225957 MTY Medicago truncatula c... 58 1e-006
gb|AC135797.13| Medicago truncatula clone mth2-11f7, comple... 58 1e-006
gb|AC125368.7| Medicago truncatula clone mth2-13h15, comple... 58 1e-006
gb|AW256969.1|AW256969 EST305106 KV2 Medicago truncatula cD... 52 8e-005
gb|BE240781.1|BE240781 EST404830 MHRP- Medicago truncatula ... 52 8e-005
gb|AL374210.1|AL374210 MtBB05C10F1 MtBB Medicago truncatula... 52 8e-005
gb|AL376016.1|AL376016 MtBB20F09F1 MtBB Medicago truncatula... 52 8e-005
gb|BE319368.2|BE319368 NF018D02RT1F1016 Developing root Med... 52 8e-005
gb|BE320942.2|BE320942 NF028E09RT1F1067 Developing root Med... 52 8e-005
gb|BG458078.1|BG458078 NF051H04PL1F1041 Phosphate starved l... 52 8e-005
gb|DW017882.1|DW017882 EST1226843 MTY Medicago truncatula c... 52 8e-005
gb|AL386126.1|AL386126 MtBC32G01F1 MtBC Medicago truncatula... 50 3e-004
gb|AL386127.1|AL386127 MtBC32G01R1 MtBC Medicago truncatula... 50 3e-004
gb|BG646283.1|BG646283 EST507902 HOGA Medicago truncatula c... 50 3e-004
gb|BI264504.1|BI264504 NF114C05PL1F1038 Phosphate starved l... 50 3e-004
gb|BI311731.1|BI311731 EST5313481 GESD Medicago truncatula ... 50 3e-004
gb|CA920391.1|CA920391 EST638109 MTUS Medicago truncatula c... 50 3e-004
gb|CX528923.1|CX528923 s13dNF10C09MJ066_243910 Methyl Jasmo... 50 3e-004
gb|AC150779.1| Medicago truncatula chromosome 2 clone mth2-... 50 3e-004
emb|CR480375.1| mth2-192E20RM1 BAC end, cultivar Jemalong A... 48 0.001
gb|BI311928.1|BI311928 EST5313678 GESD Medicago truncatula ... 48 0.001
gb|BQ154406.1|BQ154406 NF069E10IR1F1083 Irradiated Medicago... 48 0.001
gb|CA919960.1|CA919960 EST637678 MTUS Medicago truncatula c... 48 0.001
emb|CR319883.1| mte1-45D24FM1 BAC end, cultivar Jemalong A1... 46 0.005
gb|AL374663.1|AL374663 MtBB07H06F1 MtBB Medicago truncatula... 46 0.005
gb|AL374664.1|AL374664 MtBB07H06R1 MtBB Medicago truncatula... 46 0.005
gb|BF650978.1|BF650978 NF099C04EC1F1024 Elicited cell cultu... 46 0.005
gb|AW687361.2|AW687361 NF008G08RT1F1067 Developing root Med... 46 0.005
gb|AW687204.2|AW687204 NF007B03RT1F1027 Developing root Med... 46 0.005
gb|BE319480.2|BE319480 NF019A10RT1F1069 Developing root Med... 46 0.005
gb|BG455727.1|BG455727 NF065E03PL1F1021 Phosphate starved l... 46 0.005
gb|BG580665.1|BG580665 EST482392 GVN Medicago truncatula cD... 46 0.005
gb|AJ497969.1|AJ497969 AJ497969 MTFLOW Medicago truncatula ... 46 0.005
gb|AJ498530.1|AJ498530 AJ498530 MTPOSE Medicago truncatula ... 46 0.005
gb|CA919865.1|CA919865 EST637583 MTUS Medicago truncatula c... 46 0.005
gb|CF069374.1|CF069374 EST670095 MTUS Medicago truncatula c... 46 0.005
gb|AJ846449.1|AJ846449 AJ846449 MtSCF Medicago truncatula c... 46 0.005
gb|DW018231.1|DW018231 EST1227192 MTY Medicago truncatula c... 46 0.005
gb|AC171533.2| Medicago truncatula chromosome 7 clone mth2-... 42 0.073
gb|CG968257.1|CG968257 MBEMG32TF mth2 Medicago truncatula g... 40 0.29
gb|AL374734.1|AL374734 MtBB08G06R1 MtBB Medicago truncatula... 40 0.29
gb|AC131248.14| Medicago truncatula clone mth2-28n22, compl... 40 0.29
gb|AC121236.18| Medicago truncatula clone mth2-12m19, compl... 40 0.29
gb|AC151964.12| Medicago truncatula clone mth2-47g17, compl... 40 0.29
>gb|CA919240.1|CA919240 EST636958 MTUS Medicago truncatula cDNA clone MTUS-10G9, mRNA
sequence
Length = 665
Score = 97.6 bits (49), Expect = 1e-018
Identities = 109/129 (84%)
Strand = Plus / Minus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| || |||||||| || ||
Sbjct: 488 caagaagagcgtagaaacctacaagatctacatcttcaaggttctcaagcaggttcatcc 429
Query: 313 cgacatcggcatatcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 372
||||| || || ||| |||||| ||| ||||||||| |||||||| ||||||||
Sbjct: 428 tgacattggaatctccagcaaggctatggggatcatgaacagtttcatcaatgacatctt 369
Query: 373 tgagaagct 381
|||||||||
Sbjct: 368 tgagaagct 360
Score = 60.0 bits (30), Expect = 3e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 410 tacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctagtcctc 469
||||||||||| || |||||||| || || ||||| ||||| | || || || || ||
Sbjct: 331 tacaacaagaaacctaccatcacctctcgtgagattcagactgctgttcgtctcgttctt 272
Query: 470 cccggagagctcgccaagcacgccgtctccgagggaaccaaggccgtcac 519
||||| || || ||||||||||| ||||||||||||||||| || |||||
Sbjct: 271 cccggcgaacttgccaagcacgctgtctccgagggaaccaaagcagtcac 222
>gb|CA990584.1|CA990584 EST644092 GESD Medicago truncatula cDNA clone GESD-29M21, mRNA
sequence
Length = 408
Score = 97.6 bits (49), Expect = 1e-018
Identities = 109/129 (84%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| || |||||||| || ||
Sbjct: 158 caagaagagcgtagaaacctacaagatctacatcttcaaggttctcaagcaggttcatcc 217
Query: 313 cgacatcggcatatcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 372
||||| || || ||| |||||| ||| ||||||||| |||||||| ||||||||
Sbjct: 218 tgacattggaatctccagcaaggctatggggatcatgaacagtttcatcaatgacatctt 277
Query: 373 tgagaagct 381
|||||||||
Sbjct: 278 tgagaagct 286
Score = 44.1 bits (22), Expect = 0.018
Identities = 76/94 (80%)
Strand = Plus / Plus
Query: 410 tacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctagtcctc 469
||||||||||| || |||||||| || || ||||| ||||| | || || || || ||
Sbjct: 315 tacaacaagaaacctaccatcacctctcgtgagattcagactgctgttcgtctcgttctt 374
Query: 470 cccggagagctcgccaagcacgccgtctccgagg 503
||||| || || ||||||||||| ||||||||||
Sbjct: 375 cccggcgaacttgccaagcacgctgtctccgagg 408
>gb|CF068658.1|CF068658 EST669379 MTUS Medicago truncatula cDNA clone MTUS-10G9, mRNA
sequence
Length = 616
Score = 97.6 bits (49), Expect = 1e-018
Identities = 109/129 (84%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| || |||||||| || ||
Sbjct: 129 caagaagagcgtagaaacctacaagatctacatcttcaaggttctcaagcaggttcatcc 188
Query: 313 cgacatcggcatatcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 372
||||| || || ||| |||||| ||| ||||||||| |||||||| ||||||||
Sbjct: 189 tgacattggaatctccagcaaggctatggggatcatgaacagtttcatcaatgacatctt 248
Query: 373 tgagaagct 381
|||||||||
Sbjct: 249 tgagaagct 257
Score = 60.0 bits (30), Expect = 3e-007
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 410 tacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctagtcctc 469
||||||||||| || |||||||| || || ||||| ||||| | || || || || ||
Sbjct: 286 tacaacaagaaacctaccatcacctctcgtgagattcagactgctgttcgtctcgttctt 345
Query: 470 cccggagagctcgccaagcacgccgtctccgagggaaccaaggccgtcac 519
||||| || || ||||||||||| ||||||||||||||||| || |||||
Sbjct: 346 cccggcgaacttgccaagcacgctgtctccgagggaaccaaagcagtcac 395
>gb|AJ547987.1|AJ547987 AJ547987 MTAPHEU Medicago truncatula cDNA clone mtaehac110005a08,
mRNA sequence
Length = 418
Score = 97.6 bits (49), Expect = 1e-018
Identities = 109/129 (84%)
Strand = Plus / Minus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| || |||||||| || ||
Sbjct: 373 caagaagagcgtagaaacctacaagatctacatcttcaaggttctcaagcaggttcatcc 314
Query: 313 cgacatcggcatatcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 372
||||| || || ||| |||||| ||| ||||||||| |||||||| ||||||||
Sbjct: 313 tgacattggaatctccagcaaggctatggggatcatgaacagtttcatcaatgacatctt 254
Query: 373 tgagaagct 381
|||||||||
Sbjct: 253 tgagaagct 245
Score = 60.0 bits (30), Expect = 3e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 410 tacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctagtcctc 469
||||||||||| || |||||||| || || ||||| ||||| | || || || || ||
Sbjct: 216 tacaacaagaaacctaccatcacctctcgtgagattcagactgctgttcgtctcgttctt 157
Query: 470 cccggagagctcgccaagcacgccgtctccgagggaaccaaggccgtcac 519
||||| || || ||||||||||| ||||||||||||||||| || |||||
Sbjct: 156 cccggcgaacttgccaagcacgctgtctccgagggaaccaaagcagtcac 107
>gb|BI270971.1|BI270971 NF001C04FL1F1034 Developing flower Medicago truncatula cDNA clone
NF001C04FL 5', mRNA sequence
Length = 461
Score = 89.7 bits (45), Expect = 3e-016
Identities = 108/129 (83%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| || |||||||| || ||
Sbjct: 165 caagaagagcgttgaaacctacaagatctacatcttcaaggttctcaagcaggttcatcc 224
Query: 313 cgacatcggcatatcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 372
||||| || || || |||||| ||| ||||||||| ||||||||| || |||||
Sbjct: 225 tgacattggtatctcaagcaaggctatggggatcatgaacagcttcatcaatgatatctt 284
Query: 373 tgagaagct 381
|||||||||
Sbjct: 285 tgagaagct 293
Score = 58.0 bits (29), Expect = 1e-006
Identities = 98/121 (80%)
Strand = Plus / Plus
Query: 408 ggtacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctagtcc 467
|||||||||||||||| || ||||| || || ||||| ||||| | || || || || |
Sbjct: 320 ggtacaacaagaagcctacaatcacttctcgggagatacagactgctgttcgtcttgttc 379
Query: 468 tccccggagagctcgccaagcacgccgtctccgagggaaccaaggccgtcaccaagttca 527
||||||| || || || ||||| || ||||| |||||||||||||| || ||||| ||||
Sbjct: 380 tccccggtgaacttgctaagcatgctgtctctgagggaaccaaggctgttaccaaattca 439
Query: 528 c 528
|
Sbjct: 440 c 440
>gb|CX539592.1|CX539592 s13dNF65G03GS020_462446 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 554
Score = 89.7 bits (45), Expect = 3e-016
Identities = 108/129 (83%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| || |||||||| || ||
Sbjct: 167 caagaagagcgttgaaacctacaagatctacatcttcaaggttctcaagcaggttcatcc 226
Query: 313 cgacatcggcatatcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 372
||||| || || || |||||| ||| ||||||||| ||||||||| || |||||
Sbjct: 227 tgacattggtatctcaagcaaggctatggggatcatgaacagcttcatcaatgatatctt 286
Query: 373 tgagaagct 381
|||||||||
Sbjct: 287 tgagaagct 295
Score = 58.0 bits (29), Expect = 1e-006
Identities = 98/121 (80%)
Strand = Plus / Plus
Query: 408 ggtacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctagtcc 467
|||||||||||||||| || ||||| || || ||||| ||||| | || || || || |
Sbjct: 322 ggtacaacaagaagcctacaatcacttctcgggagatacagactgctgttcgtcttgttc 381
Query: 468 tccccggagagctcgccaagcacgccgtctccgagggaaccaaggccgtcaccaagttca 527
||||||| || || || ||||| || ||||| |||||||||||||| || ||||| ||||
Sbjct: 382 tccccggtgaacttgctaagcatgctgtctctgagggaaccaaggctgttaccaaattca 441
Query: 528 c 528
|
Sbjct: 442 c 442
>gb|AW559863.1|AW559863 EST314911 DSIR Medicago truncatula cDNA clone pDSIR-24P12, mRNA
sequence
Length = 337
Score = 75.8 bits (38), Expect = 5e-012
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 42 caagaagagcgttgaaacctacaagatctacatcttcaaggttctgaaacaagttcaccc 101
Query: 313 cgacat 318
|||||
Sbjct: 102 tgacat 107
>gb|AL378446.1|AL378446 MtBB38C08F1 MtBB Medicago truncatula cDNA clone MtBB38C08 T3, mRNA
sequence
Length = 479
Score = 75.8 bits (38), Expect = 5e-012
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 125 caagaagagcgttgaaacctacaagatctacatcttcaaggttctgaaacaagttcaccc 184
Query: 313 cgacat 318
|||||
Sbjct: 185 tgacat 190
>gb|AL378447.1|AL378447 MtBB38C09F1 MtBB Medicago truncatula cDNA clone MtBB38C09 T3, mRNA
sequence
Length = 479
Score = 75.8 bits (38), Expect = 5e-012
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 125 caagaagagcgttgaaacctacaagatctacatcttcaaggttctgaaacaagttcaccc 184
Query: 313 cgacat 318
|||||
Sbjct: 185 tgacat 190
>gb|AL378448.1|AL378448 MtBB38C09R1 MtBB Medicago truncatula cDNA clone MtBB38C09 T7, mRNA
sequence
Length = 489
Score = 75.8 bits (38), Expect = 5e-012
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 125 caagaagagcgttgaaacctacaagatctacatcttcaaggttctgaaacaagttcaccc 184
Query: 313 cgacat 318
|||||
Sbjct: 185 tgacat 190
>gb|CA919136.1|CA919136 EST636854 MTUS Medicago truncatula cDNA clone MTUS-8C10, mRNA
sequence
Length = 553
Score = 75.8 bits (38), Expect = 5e-012
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 388 caagaagagcgttgaaacctacaagatctacatcttcaaggttctgaaacaagttcaccc 329
Query: 313 cgacat 318
|||||
Sbjct: 328 tgacat 323
>gb|CF068462.1|CF068462 EST669183 MTUS Medicago truncatula cDNA clone MTUS-8C10, mRNA
sequence
Length = 518
Score = 75.8 bits (38), Expect = 5e-012
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 132 caagaagagcgttgaaacctacaagatctacatcttcaaggttctgaaacaagttcaccc 191
Query: 313 cgacat 318
|||||
Sbjct: 192 tgacat 197
>gb|AJ547979.1|AJ547979 AJ547979 MTAPHEU Medicago truncatula cDNA clone mtaehac110004b03,
mRNA sequence
Length = 452
Score = 75.8 bits (38), Expect = 5e-012
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || |||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 251 caagaagagcgttgaaacctacaagatctacatcttcaaggttctgaaacaagttcaccc 192
Query: 313 cgacat 318
|||||
Sbjct: 191 tgacat 186
>gb|AQ841133.1|AQ841133 T132102b Medicago truncatula BAC library Medicago truncatula
genomic clone 10F20, DNA sequence
Length = 498
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 428 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 369
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 368 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 319
Score = 40.1 bits (20), Expect = 0.29
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||| ||||||||||| || || ||||||||
Sbjct: 218 gccaagcatgctgtctctgagggaaccaaagctgtgaccaagtt 175
>gb|CG963694.1|CG963694 MBEMG15TF mth2 Medicago truncatula genomic clone 1D5, DNA sequence
Length = 901
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 438 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 379
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 378 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 329
Score = 40.1 bits (20), Expect = 0.29
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||| ||||||||||| || || ||||||||
Sbjct: 228 gccaagcatgctgtctctgagggaaccaaagctgtgaccaagtt 185
>gb|AA660317.1|AA660317 00188 MtRHE Medicago truncatula cDNA 5' similar to histone H2B,
mRNA sequence
Length = 589
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 226 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 285
Query: 313 cgacat 318
|||||
Sbjct: 286 agacat 291
>gb|AW685911.1|AW685911 NF031F10NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF031F10NR 5', mRNA sequence
Length = 677
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 241 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 300
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 301 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 350
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 79 gagaagaagccagcggagaagaa 101
>gb|AW287963.2|AW287963 N100807e rootphos(-) Medicago truncatula cDNA clone MHRP-11F1, mRNA
sequence
Length = 450
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 254 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 313
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 314 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 363
>gb|AW775272.1|AW775272 EST334337 DSIL Medicago truncatula cDNA clone pDSIL-1A15, mRNA
sequence
Length = 629
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 189 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 248
Query: 313 cgacat 318
|||||
Sbjct: 249 agacat 254
>gb|BE123986.1|BE123986 EST394111 DSIL Medicago truncatula cDNA clone pDSIL-11H22, mRNA
sequence
Length = 628
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 246 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 305
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 306 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 355
>gb|AL378417.1|AL378417 MtBB38B03F1 MtBB Medicago truncatula cDNA clone MtBB38B03 T3, mRNA
sequence
Length = 477
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 198 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 257
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 258 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 307
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||||||||||||||| || || ||||||||
Sbjct: 408 gccaagcatgctgtctccgagggaaccaaagctgtgaccaagtt 451
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 33 gagaagaagccagcggagaagaa 55
>gb|AL378418.1|AL378418 MtBB38B03R1 MtBB Medicago truncatula cDNA clone MtBB38B03 T7, mRNA
sequence
Length = 542
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 81 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 140
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 141 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 190
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||||||||||||||| || || ||||||||
Sbjct: 291 gccaagcatgctgtctccgagggaaccaaagctgtgaccaagtt 334
>gb|AL385399.1|AL385399 MtBC28D03F1 MtBC Medicago truncatula cDNA clone MtBC28D03 T3, mRNA
sequence
Length = 471
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 235 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 294
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 295 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 344
>gb|AL385400.1|AL385400 MtBC28D03R1 MtBC Medicago truncatula cDNA clone MtBC28D03 T7, mRNA
sequence
Length = 438
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 34 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 93
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 94 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 143
Score = 40.1 bits (20), Expect = 0.29
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||| ||||||||||| || || ||||||||
Sbjct: 244 gccaagcatgctgtctctgagggaaccaaagctgtgaccaagtt 287
>gb|BF634248.1|BF634248 NF084C11DT1F1085 Drought Medicago truncatula cDNA clone NF084C11DT
5', mRNA sequence
Length = 436
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 220 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 279
Query: 313 cgacat 318
|||||
Sbjct: 280 agacat 285
>gb|BF634808.1|BF634808 NF075B04DT1F1032 Drought Medicago truncatula cDNA clone NF075B04DT
5', mRNA sequence
Length = 652
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 219 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 278
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 279 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 328
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 57 gagaagaagccagcggagaagaa 79
>gb|BF637309.1|BF637309 NF072C05LF1F1035 Developing leaf Medicago truncatula cDNA clone
NF072C05LF 5', mRNA sequence
Length = 627
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 214 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 273
Query: 313 cgacat 318
|||||
Sbjct: 274 agacat 279
>gb|BF650625.1|BF650625 NF095A07EC1F1051 Elicited cell culture Medicago truncatula cDNA
clone NF095A07EC 5', mRNA sequence
Length = 673
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 224 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 283
Query: 313 cgacat 318
|||||
Sbjct: 284 agacat 289
>gb|BG457309.1|BG457309 NF103C08PL1F1056 Phosphate starved leaf Medicago truncatula cDNA
clone NF103C08PL 5', mRNA sequence
Length = 655
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 248 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 307
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 308 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 357
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 86 gagaagaagccagcggagaagaa 108
>gb|BG581393.1|BG581393 EST483126 GVN Medicago truncatula cDNA clone pGVN-64B2 5' end, mRNA
sequence
Length = 664
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 230 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 289
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 290 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 339
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||||||||||||||| || || ||||||||
Sbjct: 440 gccaagcatgctgtctccgagggaaccaaagctgtgaccaagtt 483
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 65 gagaagaagccagcggagaagaa 87
>gb|BI269843.1|BI269843 NF010F09IR1F1078 Irradiated Medicago truncatula cDNA clone
NF010F09IR 5', mRNA sequence
Length = 587
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 138 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 197
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 198 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 247
>gb|BI311742.1|BI311742 EST5313492 GESD Medicago truncatula cDNA clone pGESD15E10 5' end,
mRNA sequence
Length = 629
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 394 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 335
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 334 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 285
Score = 40.1 bits (20), Expect = 0.29
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||| ||||||||||| || || ||||||||
Sbjct: 184 gccaagcatgctgtctctgagggaaccaaagctgtgaccaagtt 141
>gb|BQ139420.1|BQ139420 NF015A11PH1F1085 Phoma-infected Medicago truncatula cDNA clone
NF015A11PH 5', mRNA sequence
Length = 636
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 252 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 311
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 312 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 361
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 90 gagaagaagccagcggagaagaa 112
>gb|BQ148106.1|BQ148106 NF058G06FL1F1052 Developing flower Medicago truncatula cDNA clone
NF058G06FL 5', mRNA sequence
Length = 672
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 222 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 281
Query: 313 cgacat 318
|||||
Sbjct: 282 agacat 287
>gb|AJ501345.1|AJ501345 AJ501345 MTAMP Medicago truncatula cDNA clone mtgmadc120005g06,
mRNA sequence
Length = 582
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 254 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 313
Query: 313 cgacat 318
|||||
Sbjct: 314 agacat 319
>gb|AJ502204.1|AJ502204 AJ502204 MTAMP Medicago truncatula cDNA clone mtgmadc120017g12,
mRNA sequence
Length = 694
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 241 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 300
Query: 313 cgacat 318
|||||
Sbjct: 301 agacat 306
>gb|AJ503206.1|AJ503206 AJ503206 MTAMP Medicago truncatula cDNA clone mtgmadc120031a12,
mRNA sequence
Length = 419
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 244 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 303
Query: 313 cgacat 318
|||||
Sbjct: 304 agacat 309
>gb|AJ503287.1|AJ503287 AJ503287 MTAMP Medicago truncatula cDNA clone mtgmadc120032c11,
mRNA sequence
Length = 413
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 120 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 179
Query: 313 cgacat 318
|||||
Sbjct: 180 agacat 185
>gb|AJ498470.1|AJ498470 AJ498470 MTPOSE Medicago truncatula cDNA clone mt--acc955205b08,
mRNA sequence
Length = 535
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 277 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 336
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 337 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 386
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||||||||||||||| || || ||||||||
Sbjct: 487 gccaagcatgctgtctccgagggaaccaaagctgtgaccaagtt 530
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 112 gagaagaagccagcggagaagaa 134
>gb|CA991103.1|CA991103 EST644611 GESD Medicago truncatula cDNA clone GESD-31L20, mRNA
sequence
Length = 681
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 188 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 247
Query: 313 cgacat 318
|||||
Sbjct: 248 agacat 253
>gb|CB894541.1|CB894541 EST647333 HOGA Medicago truncatula cDNA clone HOGA-31F3, mRNA
sequence
Length = 777
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 127 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 186
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 187 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 236
Score = 40.1 bits (20), Expect = 0.29
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||| ||||||||||| || || ||||||||
Sbjct: 337 gccaagcatgctgtctctgagggaaccaaagctgtgaccaagtt 380
>gb|CF069414.1|CF069414 EST670135 MTUS Medicago truncatula cDNA clone MTUS-20A9, mRNA
sequence
Length = 650
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 215 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 274
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 275 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 324
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||||||||||||||| || || ||||||||
Sbjct: 425 gccaagcatgctgtctccgagggaaccaaagctgtgaccaagtt 468
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 50 gagaagaagccagcggagaagaa 72
>gb|AJ846381.1|AJ846381 AJ846381 MtSCF Medicago truncatula cDNA clone MtCF02D07S6, mRNA
sequence
Length = 502
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 269 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 328
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 329 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 378
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 107 gagaagaagccagcggagaagaa 129
>gb|CX539624.1|CX539624 s13dNF66B07GS057_462514 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 623
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 248 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 307
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 308 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 357
Score = 40.1 bits (20), Expect = 0.29
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||| ||||||||||| || || ||||||||
Sbjct: 458 gccaagcatgctgtctctgagggaaccaaagctgtgaccaagtt 501
>gb|CX542562.1|CX542562 s13dNF57H03GS032_474342 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 562
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 241 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 300
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 301 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 350
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 79 gagaagaagccagcggagaagaa 101
>gb|AC134242.17| Medicago truncatula clone mth2-10p20, complete sequence
Length = 115005
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 91962 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 92021
Query: 313 cgacat 318
|||||
Sbjct: 92022 agacat 92027
Score = 63.9 bits (32), Expect = 2e-008
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaa 300
|||||||||||| || || ||||||||||||||||||||||| |||||
Sbjct: 90182 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaa 90229
>gb|AC139841.14| Medicago truncatula clone mth2-35g18, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 125452
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 118778 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 118719
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 118718 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 118669
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 104879 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagc 104938
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || ||||| ||||||||
Sbjct: 104939 aaggccatgggtatcatgaacagtttcatcaatgatatcttcgagaagct 104988
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 482 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagtt 525
|||||||| || ||||||||||||||||| || || ||||||||
Sbjct: 105089 gccaagcatgctgtctccgagggaaccaaagctgtgaccaagtt 105132
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 118940 gagaagaagccagcggagaagaa 118918
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 111774 gagaagaagccagcggagaagaa 111752
Score = 46.1 bits (23), Expect = 0.005
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacat 318
|||||||||||||||||||| || ||||| || || ||||| |||||
Sbjct: 111609 tacaagatctacatcttcaaagttctgaaacaagttcacccagacat 111563
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 gagaagaagccagcggagaagaa 129
|||||||||||||||||||||||
Sbjct: 104714 gagaagaagccagcggagaagaa 104736
>gb|AC146745.19| Medicago truncatula clone mth2-53p19, complete sequence
Length = 121955
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 75874 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 75815
Query: 313 cgacat 318
|||||
Sbjct: 75814 agacat 75809
>gb|AC174297.7| Medicago truncatula clone mth2-73p24, WORKING DRAFT SEQUENCE, 2
unordered pieces
Length = 114191
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 253 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
|||||||||||| || || ||||||||||||||||||||||| ||||| || || |||||
Sbjct: 36668 caagaagagcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcaccc 36727
Query: 313 cgacat 318
|||||
Sbjct: 36728 agacat 36733
>gb|BG450237.1|BG450237 NF012D12DT1F1102 Drought Medicago truncatula cDNA clone NF012D12DT
5', mRNA sequence
Length = 682
Score = 63.9 bits (32), Expect = 2e-008
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 272 tacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatatcctcc 331
|||||||||||||||||||| || ||||||||||| ||||| ||||| || || || |
Sbjct: 381 tacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatntcaagc 322
Query: 332 aaggccatgtccatcatgaactccttcatcaacgacatctttgagaagct 381
||||||||| ||||||||| |||||||| || || ||| |||||||
Sbjct: 321 aaggccatgggtatcatgaacagtttcatcaatgatatttttnagaagct 272
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 156,965
Number of Sequences: 392609
Number of extensions: 156965
Number of successful extensions: 12907
Number of sequences better than 0.5: 117
Number of HSP's better than 0.5 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12402
Number of HSP's gapped (non-prelim): 497
length of query: 823
length of database: 441,732,993
effective HSP length: 20
effective length of query: 803
effective length of database: 433,880,813
effective search space: 348406292839
effective search space used: 348406292839
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)