BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.458
(708 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ388756.1|AJ388756 AJ388756 Medicago truncatula R108 Me... 46 0.004
gb|AW288023.2|AW288023 N100867e rootphos(-) Medicago trunca... 44 0.016
gb|AW329014.2|AW329014 N200211e rootphos(-) Medicago trunca... 44 0.016
gb|AW329149.2|AW329149 N200358e rootphos(-) Medicago trunca... 44 0.016
gb|AW774782.1|AW774782 EST333933 KV3 Medicago truncatula cD... 44 0.016
gb|AW127299.2|AW127299 M110242 GVN Medicago truncatula cDNA... 44 0.016
gb|BE124371.1|BE124371 EST393406 GVN Medicago truncatula cD... 44 0.016
gb|BE239696.1|BE239696 EST403745 MHRP- Medicago truncatula ... 44 0.016
gb|BE249507.1|BE249507 NF021A05LF1F1036 Developing leaf Med... 44 0.016
gb|BE202568.1|BE202568 EST392977 KV1 Medicago truncatula cD... 44 0.016
gb|BE203261.1|BE203261 EST403283 KV1 Medicago truncatula cD... 44 0.016
gb|BE202945.1|BE202945 EST402967 KV1 Medicago truncatula cD... 44 0.016
gb|BE202946.1|BE202946 EST402968 KV1 Medicago truncatula cD... 44 0.016
gb|AL373488.1|AL373488 MtBB01B02F2 MtBB Medicago truncatula... 44 0.016
gb|AL373986.1|AL373986 MtBB04A04R1 MtBB Medicago truncatula... 44 0.016
gb|AL374486.1|AL374486 MtBB06H04F1 MtBB Medicago truncatula... 44 0.016
gb|AL374769.1|AL374769 MtBB09B04F1 MtBB Medicago truncatula... 44 0.016
gb|AL374770.1|AL374770 MtBB09B04R1 MtBB Medicago truncatula... 44 0.016
gb|AL378313.1|AL378313 MtBB37D05F1 MtBB Medicago truncatula... 44 0.016
gb|AL379801.1|AL379801 MtBB47E08F1 MtBB Medicago truncatula... 44 0.016
gb|AL379802.1|AL379802 MtBB47E08R1 MtBB Medicago truncatula... 44 0.016
gb|AL381004.1|AL381004 MtBB55H11F1 MtBB Medicago truncatula... 44 0.016
gb|AL385329.1|AL385329 MtBC27H04F1 MtBC Medicago truncatula... 44 0.016
gb|AL385962.1|AL385962 MtBC31G06F1 MtBC Medicago truncatula... 44 0.016
gb|AL385963.1|AL385963 MtBC31G06R1 MtBC Medicago truncatula... 44 0.016
gb|AL386786.1|AL386786 MtBC36G12F1 MtBC Medicago truncatula... 44 0.016
gb|AL388224.1|AL388224 MtBC47D02F1 MtBC Medicago truncatula... 44 0.016
gb|AL388225.1|AL388225 MtBC47D02R1 MtBC Medicago truncatula... 44 0.016
gb|BE941063.1|BE941063 EST420642 MGHG Medicago truncatula c... 44 0.016
gb|BE998441.1|BE998441 EST430164 GVSN Medicago truncatula c... 44 0.016
gb|BF004184.1|BF004184 EST432682 KV1 Medicago truncatula cD... 44 0.016
gb|BF004744.1|BF004744 EST433242 KV1 Medicago truncatula cD... 44 0.016
gb|BF636659.1|BF636659 NF047B06LF1F1046 Developing leaf Med... 44 0.016
gb|BF636969.1|BF636969 NF047H07LF1F1061 Developing leaf Med... 44 0.016
gb|BF647623.1|BF647623 NF078E05EC1F1038 Elicited cell cultu... 44 0.016
gb|BF650806.1|BF650806 NF100G06EC1F1050 Elicited cell cultu... 44 0.016
gb|AW687636.2|AW687636 NF012A06RT1F1040 Developing root Med... 44 0.016
gb|BE320389.2|BE320389 NF030D01RT1F1010 Developing root Med... 44 0.016
gb|BE316381.2|BE316381 NF033E10LF1F1071 Developing leaf Med... 44 0.016
gb|BE315752.2|BE315752 NF025H10LF1F1080 Developing leaf Med... 44 0.016
gb|BE318177.2|BE318177 NF036B10LF1F1078 Developing leaf Med... 44 0.016
gb|BE248004.2|BE248004 NF001G11DT1F1084 Drought Medicago tr... 44 0.016
gb|BE248996.2|BE248996 NF030F06DT1F1048 Drought Medicago tr... 44 0.016
gb|BI268420.1|BI268420 NF003B11GS1F1092 Germinating Seed Me... 44 0.016
gb|BI269323.1|BI269323 NF007E08IR1F1066 Irradiated Medicago... 44 0.016
gb|BI270461.1|BI270461 NF052D12FL1F1102 Developing flower M... 44 0.016
gb|BI272098.1|BI272098 NF020F06FL1F1058 Developing flower M... 44 0.016
gb|BI272256.1|BI272256 NF016A04FL1F1024 Developing flower M... 44 0.016
gb|BI272419.1|BI272419 NF020H10FL1F1091 Developing flower M... 44 0.016
gb|BI272472.1|BI272472 NF021G03FL1F1023 Developing flower M... 44 0.016
gb|BI272501.1|BI272501 NF027A04FL1F1024 Developing flower M... 44 0.016
gb|BI273045.1|BI273045 NF043D12FL1F1101 Developing flower M... 44 0.016
gb|BI273269.1|BI273269 NF099D11FL1F1093 Developing flower M... 44 0.016
gb|BI273270.1|BI273270 NF099D12FL1F1101 Developing flower M... 44 0.016
gb|BI311307.1|BI311307 EST5313057 GESD Medicago truncatula ... 44 0.016
gb|BI311755.1|BI311755 EST5313505 GESD Medicago truncatula ... 44 0.016
gb|BQ140717.1|BQ140717 NF042C10PH1F1082 Phoma-infected Medi... 44 0.016
gb|BQ141362.1|BQ141362 NF018G01PH1F1008 Phoma-infected Medi... 44 0.016
gb|BQ146739.1|BQ146739 NF053G10FL1F1084 Developing flower M... 44 0.016
gb|BQ148502.1|BQ148502 NF068H05FL1F1048 Developing flower M... 44 0.016
gb|BQ151066.1|BQ151066 NF043B10LF1F1078 Developing leaf Med... 44 0.016
gb|BQ153120.1|BQ153120 NF029H06IR1F1060 Irradiated Medicago... 44 0.016
gb|BQ153448.1|BQ153448 NF036H07IR1F1062 Irradiated Medicago... 44 0.016
gb|BQ153452.1|BQ153452 NF036H06IR1F1058 Irradiated Medicago... 44 0.016
gb|BQ154738.1|BQ154738 NF099H12IR1F1104 Irradiated Medicago... 44 0.016
gb|BQ155453.1|BQ155453 NF080F08IR1F1075 Irradiated Medicago... 44 0.016
gb|BQ155880.1|BQ155880 NF085C07IR1F1054 Irradiated Medicago... 44 0.016
gb|BQ156119.1|BQ156119 NF089D02IR1F1026 Irradiated Medicago... 44 0.016
gb|BQ156349.1|BQ156349 NF091H11IR1F1096 Irradiated Medicago... 44 0.016
gb|BQ156849.1|BQ156849 NF097H08IR1F1076 Irradiated Medicago... 44 0.016
gb|BQ157719.1|BQ157719 NF108E12IR1F1099 Irradiated Medicago... 44 0.016
gb|AJ501077.1|AJ501077 AJ501077 MTAMP Medicago truncatula c... 44 0.016
gb|AJ501991.1|AJ501991 AJ501991 MTAMP Medicago truncatula c... 44 0.016
gb|AJ503723.1|AJ503723 AJ503723 MTAMP Medicago truncatula c... 44 0.016
gb|AJ503866.1|AJ503866 AJ503866 MTAMP Medicago truncatula c... 44 0.016
gb|AJ503937.1|AJ503937 AJ503937 MTAMP Medicago truncatula c... 44 0.016
gb|AJ498926.1|AJ498926 AJ498926 MTPOSE Medicago truncatula ... 44 0.016
gb|CA922381.1|CA922381 EST640099 MTUS Medicago truncatula c... 44 0.016
gb|CA990648.1|CA990648 EST644156 GESD Medicago truncatula c... 44 0.016
gb|AJ846373.1|AJ846373 AJ846373 MtSCF Medicago truncatula c... 44 0.016
gb|CX517481.1|CX517481 s13dNF13H05VI048_399981 Virus-Infect... 44 0.016
gb|CX517683.1|CX517683 s13dNF17H02VI028_418439 Virus-Infect... 44 0.016
gb|CX536114.1|CX536114 s13dNF03B11GS092_455402 Germinating ... 44 0.016
gb|CX538293.1|CX538293 s13dNF41E01GS003_459836 Germinating ... 44 0.016
gb|CX538484.1|CX538484 s13dNF79H06GS048_460220 Germinating ... 44 0.016
gb|CX540575.1|CX540575 s13dNF0CC04GS034_464426 Germinating ... 44 0.016
gb|CX540608.1|CX540608 s13dNF0CF07GS063_464492 Germinating ... 44 0.016
gb|CX541419.1|CX541419 s13dNF92D01GS014_466140 Germinating ... 44 0.016
gb|CX542440.1|CX542440 s13dNF94C02GS006_468196 Germinating ... 44 0.016
gb|AC147434.12| Medicago truncatula clone mth2-28h7, comple... 44 0.016
gb|BE322960.1|BE322960 NF025F11IN1F1092 Insect herbivory Me... 40 0.25
gb|AL377206.1|AL377206 MtBB30A07F1 MtBB Medicago truncatula... 40 0.25
gb|BE941402.1|BE941402 EST420981 MGHG Medicago truncatula c... 40 0.25
gb|BF518454.1|BF518454 EST455901 DSIL Medicago truncatula c... 40 0.25
gb|BF643793.1|BF643793 NF057F11EC1F1095 Elicited cell cultu... 40 0.25
gb|BG454561.1|BG454561 NF101D10LF1F1079 Developing leaf Med... 40 0.25
gb|BG456042.1|BG456042 NF074E07PL1F1053 Phosphate starved l... 40 0.25
gb|BG588761.1|BG588761 EST490570 MHRP- Medicago truncatula ... 40 0.25
gb|BI311253.1|BI311253 EST5313003 GESD Medicago truncatula ... 40 0.25
gb|AJ502714.1|AJ502714 AJ502714 MTAMP Medicago truncatula c... 40 0.25
gb|AJ498003.1|AJ498003 AJ498003 MTFLOW Medicago truncatula ... 40 0.25
gb|AJ498134.1|AJ498134 AJ498134 MTPOSE Medicago truncatula ... 40 0.25
>gb|AJ388756.1|AJ388756 AJ388756 Medicago truncatula R108 Medicago truncatula cDNA clone
MtNo119 similar to 60S ribosomal protein L37B, mRNA
sequence
Length = 588
Score = 46.1 bits (23), Expect = 0.004
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggc 260
|||||||||||||| ||||||||||| || || || ||||| ||| |||||| ||||
Sbjct: 140 cagatcgagggggtaaacaccaaggaagaagttgcatggta-tgctgggaagaaattggc 198
Query: 261 ctacatctacaaggccaag 279
|||||| ||||||||||||
Sbjct: 199 ctacatttacaaggccaag 217
>gb|AW288023.2|AW288023 N100867e rootphos(-) Medicago truncatula cDNA clone MHRP-12C7, mRNA
sequence
Length = 477
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 161 cagatcgagggggtaaacaccaagga 186
>gb|AW329014.2|AW329014 N200211e rootphos(-) Medicago truncatula cDNA clone MHRP-15C7, mRNA
sequence
Length = 534
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 102 cagatcgagggggtaaacaccaagga 127
>gb|AW329149.2|AW329149 N200358e rootphos(-) Medicago truncatula cDNA clone MHRP-16G10,
mRNA sequence
Length = 483
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 142 cagatcgagggggtaaacaccaagga 167
>gb|AW774782.1|AW774782 EST333933 KV3 Medicago truncatula cDNA clone pKV3-23N6, mRNA
sequence
Length = 671
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 122 cagatcgagggggtaaacaccaagga 147
>gb|AW127299.2|AW127299 M110242 GVN Medicago truncatula cDNA clone N298, mRNA sequence
Length = 385
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 170 cagatcgagggggtaaacaccaagga 195
>gb|BE124371.1|BE124371 EST393406 GVN Medicago truncatula cDNA clone pGVN-58K3, mRNA
sequence
Length = 561
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 169 cagatcgagggggtaaacaccaagga 194
>gb|BE239696.1|BE239696 EST403745 MHRP- Medicago truncatula cDNA clone pMHRP-38C5, mRNA
sequence
Length = 556
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 101 cagatcgagggggtaaacaccaagga 126
>gb|BE249507.1|BE249507 NF021A05LF1F1036 Developing leaf Medicago truncatula cDNA clone
NF021A05LF 5', mRNA sequence
Length = 606
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 162 cagatcgagggggtaaacaccaagga 187
>gb|BE202568.1|BE202568 EST392977 KV1 Medicago truncatula cDNA clone pKV1-13K15, mRNA
sequence
Length = 513
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 394 cagatcgagggggtaaacaccaagga 369
>gb|BE203261.1|BE203261 EST403283 KV1 Medicago truncatula cDNA clone pKV1-5A3, mRNA
sequence
Length = 534
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 142 cagatcgagggggtaaacaccaagga 167
>gb|BE202945.1|BE202945 EST402967 KV1 Medicago truncatula cDNA clone pKV1-3N3, mRNA
sequence
Length = 570
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 136 cagatcgagggggtaaacaccaagga 161
>gb|BE202946.1|BE202946 EST402968 KV1 Medicago truncatula cDNA clone pKV1-3N3, mRNA
sequence
Length = 570
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 133 cagatcgagggggtaaacaccaagga 158
>gb|AL373488.1|AL373488 MtBB01B02F2 MtBB Medicago truncatula cDNA clone MtBB01B02 T3, mRNA
sequence
Length = 483
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 153 cagatcgagggggtaaacaccaagga 178
>gb|AL373986.1|AL373986 MtBB04A04R1 MtBB Medicago truncatula cDNA clone MtBB04A04 T7, mRNA
sequence
Length = 551
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 94 cagatcgagggggtaaacaccaagga 119
>gb|AL374486.1|AL374486 MtBB06H04F1 MtBB Medicago truncatula cDNA clone MtBB06H04 T3, mRNA
sequence
Length = 493
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 143 cagatcgagggggtaaacaccaagga 168
>gb|AL374769.1|AL374769 MtBB09B04F1 MtBB Medicago truncatula cDNA clone MtBB09B04 T3, mRNA
sequence
Length = 495
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 142 cagatcgagggggtaaacaccaagga 167
>gb|AL374770.1|AL374770 MtBB09B04R1 MtBB Medicago truncatula cDNA clone MtBB09B04 T7, mRNA
sequence
Length = 550
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 76 cagatcgagggggtaaacaccaagga 101
>gb|AL378313.1|AL378313 MtBB37D05F1 MtBB Medicago truncatula cDNA clone MtBB37D05 T3, mRNA
sequence
Length = 351
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 154 cagatcgagggggtaaacaccaagga 179
>gb|AL379801.1|AL379801 MtBB47E08F1 MtBB Medicago truncatula cDNA clone MtBB47E08 T3, mRNA
sequence
Length = 491
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 155 cagatcgagggggtaaacaccaagga 180
>gb|AL379802.1|AL379802 MtBB47E08R1 MtBB Medicago truncatula cDNA clone MtBB47E08 T7, mRNA
sequence
Length = 550
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 77 cagatcgagggggtaaacaccaagga 102
>gb|AL381004.1|AL381004 MtBB55H11F1 MtBB Medicago truncatula cDNA clone MtBB55H11 T3, mRNA
sequence
Length = 480
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 76 cagatcgagggggtaaacaccaagga 101
>gb|AL385329.1|AL385329 MtBC27H04F1 MtBC Medicago truncatula cDNA clone MtBC27H04 T3, mRNA
sequence
Length = 356
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 160 cagatcgagggggtaaacaccaagga 185
>gb|AL385962.1|AL385962 MtBC31G06F1 MtBC Medicago truncatula cDNA clone MtBC31G06 T3, mRNA
sequence
Length = 492
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 144 cagatcgagggggtaaacaccaagga 169
>gb|AL385963.1|AL385963 MtBC31G06R1 MtBC Medicago truncatula cDNA clone MtBC31G06 T7, mRNA
sequence
Length = 542
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 58 cagatcgagggggtaaacaccaagga 83
>gb|AL386786.1|AL386786 MtBC36G12F1 MtBC Medicago truncatula cDNA clone MtBC36G12 T3, mRNA
sequence
Length = 449
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 137 cagatcgagggggtaaacaccaagga 162
>gb|AL388224.1|AL388224 MtBC47D02F1 MtBC Medicago truncatula cDNA clone MtBC47D02 T3, mRNA
sequence
Length = 395
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 144 cagatcgagggggtaaacaccaagga 169
>gb|AL388225.1|AL388225 MtBC47D02R1 MtBC Medicago truncatula cDNA clone MtBC47D02 T7, mRNA
sequence
Length = 512
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 33 cagatcgagggggtaaacaccaagga 58
>gb|BE941063.1|BE941063 EST420642 MGHG Medicago truncatula cDNA clone pMGHG-2B8, mRNA
sequence
Length = 507
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 68 cagatcgagggggtaaacaccaagga 93
>gb|BE998441.1|BE998441 EST430164 GVSN Medicago truncatula cDNA clone pGVSN-9P8, mRNA
sequence
Length = 542
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 145 cagatcgagggggtaaacaccaagga 170
>gb|BF004184.1|BF004184 EST432682 KV1 Medicago truncatula cDNA clone pKV1-14J14, mRNA
sequence
Length = 374
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 142 cagatcgagggggtaaacaccaagga 167
>gb|BF004744.1|BF004744 EST433242 KV1 Medicago truncatula cDNA clone pKV1-18D1, mRNA
sequence
Length = 388
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 52 cagatcgagggggtaaacaccaagga 77
>gb|BF636659.1|BF636659 NF047B06LF1F1046 Developing leaf Medicago truncatula cDNA clone
NF047B06LF 5', mRNA sequence
Length = 527
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 157 cagatcgagggggtaaacaccaagga 182
>gb|BF636969.1|BF636969 NF047H07LF1F1061 Developing leaf Medicago truncatula cDNA clone
NF047H07LF 5', mRNA sequence
Length = 402
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 156 cagatcgagggggtaaacaccaagga 181
>gb|BF647623.1|BF647623 NF078E05EC1F1038 Elicited cell culture Medicago truncatula cDNA
clone NF078E05EC 5', mRNA sequence
Length = 555
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 131 cagatcgagggggtaaacaccaagga 156
>gb|BF650806.1|BF650806 NF100G06EC1F1050 Elicited cell culture Medicago truncatula cDNA
clone NF100G06EC 5', mRNA sequence
Length = 588
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 160 cagatcgagggggtaaacaccaagga 185
>gb|AW687636.2|AW687636 NF012A06RT1F1040 Developing root Medicago truncatula cDNA clone
NF012A06RT 5', mRNA sequence
Length = 567
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 282 cagatcgagggggtaaacaccaagga 307
>gb|BE320389.2|BE320389 NF030D01RT1F1010 Developing root Medicago truncatula cDNA clone
NF030D01RT 5', mRNA sequence
Length = 285
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 162 cagatcgagggggtaaacaccaagga 187
>gb|BE316381.2|BE316381 NF033E10LF1F1071 Developing leaf Medicago truncatula cDNA clone
NF033E10LF 5', mRNA sequence
Length = 403
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 152 cagatcgagggggtaaacaccaagga 177
>gb|BE315752.2|BE315752 NF025H10LF1F1080 Developing leaf Medicago truncatula cDNA clone
NF025H10LF 5', mRNA sequence
Length = 523
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 156 cagatcgagggggtaaacaccaagga 181
>gb|BE318177.2|BE318177 NF036B10LF1F1078 Developing leaf Medicago truncatula cDNA clone
NF036B10LF 5', mRNA sequence
Length = 447
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 147 cagatcgagggggtaaacaccaagga 172
>gb|BE248004.2|BE248004 NF001G11DT1F1084 Drought Medicago truncatula cDNA clone NF001G11DT
5', mRNA sequence
Length = 488
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 146 cagatcgagggggtaaacaccaagga 171
>gb|BE248996.2|BE248996 NF030F06DT1F1048 Drought Medicago truncatula cDNA clone NF030F06DT
5', mRNA sequence
Length = 541
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 163 cagatcgagggggtaaacaccaagga 188
>gb|BI268420.1|BI268420 NF003B11GS1F1092 Germinating Seed Medicago truncatula cDNA clone
NF003B11GS 5', mRNA sequence
Length = 292
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 102 cagatcgagggggtaaacaccaagga 127
>gb|BI269323.1|BI269323 NF007E08IR1F1066 Irradiated Medicago truncatula cDNA clone
NF007E08IR 5', mRNA sequence
Length = 470
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 39 cagatcgagggggtaaacaccaagga 64
>gb|BI270461.1|BI270461 NF052D12FL1F1102 Developing flower Medicago truncatula cDNA clone
NF052D12FL 5', mRNA sequence
Length = 604
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 163 cagatcgagggggtaaacaccaagga 188
>gb|BI272098.1|BI272098 NF020F06FL1F1058 Developing flower Medicago truncatula cDNA clone
NF020F06FL 5', mRNA sequence
Length = 588
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 163 cagatcgagggggtaaacaccaagga 188
>gb|BI272256.1|BI272256 NF016A04FL1F1024 Developing flower Medicago truncatula cDNA clone
NF016A04FL 5', mRNA sequence
Length = 484
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 162 cagatcgagggggtaaacaccaagga 187
>gb|BI272419.1|BI272419 NF020H10FL1F1091 Developing flower Medicago truncatula cDNA clone
NF020H10FL 5', mRNA sequence
Length = 620
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 148 cagatcgagggggtaaacaccaagga 173
>gb|BI272472.1|BI272472 NF021G03FL1F1023 Developing flower Medicago truncatula cDNA clone
NF021G03FL 5', mRNA sequence
Length = 372
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 202 cagatcgagggggtgaacaccaagga 227
|||||||||||||| |||||||||||
Sbjct: 157 cagatcgagggggtaaacaccaagga 182
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 130,496
Number of Sequences: 392609
Number of extensions: 130496
Number of successful extensions: 9368
Number of sequences better than 0.5: 102
Number of HSP's better than 0.5 without gapping: 90
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 9242
Number of HSP's gapped (non-prelim): 126
length of query: 708
length of database: 441,732,993
effective HSP length: 19
effective length of query: 689
effective length of database: 434,273,422
effective search space: 299214387758
effective search space used: 299214387758
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)