BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4573985.2.1
(373 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW698684.1|AW698684 R123 non-glandular-haired subtracted... 52 3e-007
gb|AJ888503.1|AJ888503 AJ888503 Medicago sativa subsp. x va... 48 4e-006
gb|AW698338.1|AW698338 G1 glandular-haired subtracted cDNA ... 46 2e-005
gb|AW698351.1|AW698351 g32 glandular-haired subtracted cDNA... 46 2e-005
gb|AW698352.1|AW698352 g34 glandular-haired subtracted cDNA... 46 2e-005
gb|AW698687.1|AW698687 R128 non-glandular-haired subtracted... 46 2e-005
gb|AW698714.1|AW698714 R91 non-glandular-haired subtracted ... 46 2e-005
gb|AW698715.1|AW698715 R93 non-glandular-haired subtracted ... 46 2e-005
gb|AJ888496.1|AJ888496 AJ888496 Medicago sativa subsp. x va... 46 2e-005
gb|AW698339.1|AW698339 g122 glandular-haired subtracted cDN... 44 7e-005
gb|AW698342.1|AW698342 G2 glandular-haired subtracted cDNA ... 44 7e-005
gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA... 44 7e-005
gb|AW698682.1|AW698682 R120 non-glandular-haired subtracted... 44 7e-005
gb|AW698685.1|AW698685 R125 non-glandular-haired subtracted... 44 7e-005
gb|AW698701.1|AW698701 R154 non-glandular-haired subtracted... 44 7e-005
gb|AW698712.1|AW698712 R8 non-glandular-haired subtracted c... 44 7e-005
gb|AW698717.1|AW698717 R96 non-glandular-haired subtracted ... 44 7e-005
gb|AW698718.1|AW698718 R98 non-glandular-haired subtracted ... 44 7e-005
gb|AW698777.1|AW698777 r361 non-glandular-haired subtracted... 44 7e-005
gb|AW698884.1|AW698884 r147 non-glandular-haired subtracted... 44 7e-005
gb|AW698899.1|AW698899 r7 non-glandular-haired subtracted c... 44 7e-005
gb|AW698341.1|AW698341 G143 glandular-haired subtracted cDN... 42 3e-004
gb|AW698345.1|AW698345 G73 glandular-haired subtracted cDNA... 42 3e-004
gb|AW698346.1|AW698346 G75 glandular-haired subtracted cDNA... 42 3e-004
gb|AW698350.1|AW698350 g29 glandular-haired subtracted cDNA... 42 3e-004
gb|AW698402.1|AW698402 G249 glandular-haired subtracted cDN... 42 3e-004
gb|AW698672.1|AW698672 R103 non-glandular-haired subtracted... 42 3e-004
gb|AW698675.1|AW698675 R10 non-glandular-haired subtracted ... 42 3e-004
gb|AW698678.1|AW698678 R113 non-glandular-haired subtracted... 42 3e-004
gb|AW698679.1|AW698679 R115 non-glandular-haired subtracted... 42 3e-004
gb|AW698681.1|AW698681 R11 non-glandular-haired subtracted ... 42 3e-004
gb|AW698683.1|AW698683 R121 non-glandular-haired subtracted... 42 3e-004
gb|AW698688.1|AW698688 R12 non-glandular-haired subtracted ... 42 3e-004
gb|AW698693.1|AW698693 R140 non-glandular-haired subtracted... 42 3e-004
gb|AW698709.1|AW698709 R84 non-glandular-haired subtracted ... 42 3e-004
gb|AW698893.1|AW698893 r166 non-glandular-haired subtracted... 42 3e-004
gb|AW698895.1|AW698895 r3 non-glandular-haired subtracted c... 42 3e-004
gb|AW698901.1|AW698901 r97 non-glandular-haired subtracted ... 42 3e-004
gb|AW698348.1|AW698348 G79 glandular-haired subtracted cDNA... 40 0.001
gb|AW698396.1|AW698396 G243 glandular-haired subtracted cDN... 40 0.001
gb|AW698697.1|AW698697 R145 non-glandular-haired subtracted... 40 0.001
gb|AW698698.1|AW698698 R146 non-glandular-haired subtracted... 40 0.001
gb|AW698707.1|AW698707 R1 non-glandular-haired subtracted c... 40 0.001
gb|AW698716.1|AW698716 R95 non-glandular-haired subtracted ... 40 0.001
gb|AW698549.1|AW698549 g346 glandular-haired subtracted cDN... 38 0.004
gb|AW698680.1|AW698680 R116 non-glandular-haired subtracted... 38 0.004
gb|AW698711.1|AW698711 R89 non-glandular-haired subtracted ... 38 0.004
gb|AJ888497.1|AJ888497 AJ888497 Medicago sativa subsp. x va... 38 0.004
gb|AW698354.1|AW698354 g40 glandular-haired subtracted cDNA... 36 0.017
gb|AW698425.1|AW698425 G276 glandular-haired subtracted cDN... 36 0.017
gb|AW698474.1|AW698474 g434 glandular-haired subtracted cDN... 36 0.017
gb|AW698677.1|AW698677 R112 non-glandular-haired subtracted... 36 0.017
gb|AW698699.1|AW698699 R149 non-glandular-haired subtracted... 36 0.017
gb|AW698886.1|AW698886 r151 non-glandular-haired subtracted... 36 0.017
gb|DQ122784.1| Medicago sativa clone C43 putative splicing ... 36 0.017
gb|AW698532.1|AW698532 g327 glandular-haired subtracted cDN... 34 0.066
gb|AW698725.1|AW698725 r295 non-glandular-haired subtracted... 34 0.066
gb|AW698728.1|AW698728 r298 non-glandular-haired subtracted... 34 0.066
gb|AW698731.1|AW698731 r302 non-glandular-haired subtracted... 34 0.066
gb|AW698882.1|AW698882 r133 non-glandular-haired subtracted... 34 0.066
gb|AJ888491.1|AJ888491 AJ888491 Medicago sativa subsp. x va... 34 0.066
gb|AJ888498.1|AJ888498 AJ888498 Medicago sativa subsp. x va... 34 0.066
gb|AW698353.1|AW698353 g38 glandular-haired subtracted cDNA... 32 0.26
gb|AW698421.1|AW698421 G270 glandular-haired subtracted cDN... 32 0.26
gb|AW698526.1|AW698526 g320 glandular-haired subtracted cDN... 32 0.26
gb|AW698896.1|AW698896 r4 non-glandular-haired subtracted c... 32 0.26
gb|CO512568.1|CO512568 s13dSG08F0700059_121062 Glandular tr... 32 0.26
gb|CO516932.1|CO516932 s13dSG58F0700061_468410 Glandular tr... 32 0.26
>gb|AW698684.1|AW698684 R123 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 156
Score = 52.0 bits (26), Expect = 3e-007
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 347 cctcgtacctcggccgcgaccacgct 372
||||||||||||||||||||||||||
Sbjct: 26 cctcgtacctcggccgcgaccacgct 1
>gb|AJ888503.1|AJ888503 AJ888503 Medicago sativa subsp. x varia 4-day-old Medicago sativa
subsp. x varia cDNA, mRNA sequence
Length = 795
Score = 48.1 bits (24), Expect = 4e-006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 350 cgtacctcggccgcgaccacgcta 373
||||||||||||||||||||||||
Sbjct: 69 cgtacctcggccgcgaccacgcta 46
>gb|AW698338.1|AW698338 G1 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 483
Score = 46.1 bits (23), Expect = 2e-005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 453 gtacctcggccgcgaccacgcta 475
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 cgagcggccgcccgggcagg 22
||||||||||||||||||||
Sbjct: 1 cgagcggccgcccgggcagg 20
>gb|AW698351.1|AW698351 g32 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 327
Score = 46.1 bits (23), Expect = 2e-005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 23 gtacctcggccgcgaccacgcta 1
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 ttcgagcggccgcccgggcagg 22
||||||||||||||||||||||
Sbjct: 315 ttcgagcggccgcccgggcagg 294
>gb|AW698352.1|AW698352 g34 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 365
Score = 46.1 bits (23), Expect = 2e-005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 343 gtacctcggccgcgaccacgcta 365
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 cgagcggccgcccgggcagg 22
||||||||||||||||||||
Sbjct: 1 cgagcggccgcccgggcagg 20
>gb|AW698687.1|AW698687 R128 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 477
Score = 46.1 bits (23), Expect = 2e-005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 350 cgtacctcggccgcgaccacgct 372
|||||||||||||||||||||||
Sbjct: 23 cgtacctcggccgcgaccacgct 1
>gb|AW698714.1|AW698714 R91 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 69
Score = 46.1 bits (23), Expect = 2e-005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 23 gtacctcggccgcgaccacgcta 1
>gb|AW698715.1|AW698715 R93 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 440
Score = 46.1 bits (23), Expect = 2e-005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 350 cgtacctcggccgcgaccacgct 372
|||||||||||||||||||||||
Sbjct: 418 cgtacctcggccgcgaccacgct 440
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcagg 21
>gb|AJ888496.1|AJ888496 AJ888496 Medicago sativa subsp. x varia 4-day-old Medicago sativa
subsp. x varia cDNA, mRNA sequence
Length = 470
Score = 46.1 bits (23), Expect = 2e-005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 350 cgtacctcggccgcgaccacgct 372
|||||||||||||||||||||||
Sbjct: 448 cgtacctcggccgcgaccacgct 470
>gb|AW698339.1|AW698339 g122 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 390
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 23 gtacctcggccgcgaccacgct 2
>gb|AW698342.1|AW698342 G2 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 182
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 161 gtacctcggccgcgaccacgct 182
>gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 553
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttcgagcggccgcccgggcagg 22
||||||||||||||||||||||
Sbjct: 88 ttcgagcggccgcccgggcagg 109
>gb|AW698682.1|AW698682 R120 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 181
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 160 gtacctcggccgcgaccacgct 181
Score = 34.2 bits (17), Expect = 0.066
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 3 cgagcggccgcccgggcagg 22
||||||| ||||||||||||
Sbjct: 1 cgagcggncgcccgggcagg 20
>gb|AW698685.1|AW698685 R125 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 393
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 393 tcgagcggccgcccgggcagg 373
>gb|AW698701.1|AW698701 R154 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 366
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AW698712.1|AW698712 R8 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 248
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AW698717.1|AW698717 R96 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 384
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 384 tcgagcggccgcccgggcagg 364
>gb|AW698718.1|AW698718 R98 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 330
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 330 tcgagcggccgcccgggcagg 310
>gb|AW698777.1|AW698777 r361 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 340
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 ttcgagcggccgcccgggcagg 22
||||||||||||||||||||||
Sbjct: 333 ttcgagcggccgcccgggcagg 312
>gb|AW698884.1|AW698884 r147 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 178
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 157 gtacctcggccgcgaccacgct 178
>gb|AW698899.1|AW698899 r7 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 421
Score = 44.1 bits (22), Expect = 7e-005
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AW698341.1|AW698341 G143 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 264
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 264 tcgagcggccgcccgggcagg 244
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 353 acctcggccgcgaccacgct 372
||||||||||||||||||||
Sbjct: 21 acctcggccgcgaccacgct 2
>gb|AW698345.1|AW698345 G73 glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 407
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcagg 21
>gb|AW698346.1|AW698346 G75 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 225
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgc 371
|||||||||||||||||||||
Sbjct: 21 gtacctcggccgcgaccacgc 1
>gb|AW698350.1|AW698350 g29 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 274
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 274 tcgagcggccgcccgggcagg 254
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 352 tacctcggccgcgaccacgc 371
||||||||||||||||||||
Sbjct: 20 tacctcggccgcgaccacgc 1
>gb|AW698402.1|AW698402 G249 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 316
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 ttcgagcggccgcccgggcag 21
|||||||||||||||||||||
Sbjct: 309 ttcgagcggccgcccgggcag 289
Score = 36.2 bits (18), Expect = 0.017
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
|||| |||||||||||||||||
Sbjct: 22 gtacgtcggccgcgaccacgct 1
>gb|AW698672.1|AW698672 R103 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 251
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcagg 21
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 353 acctcggccgcgaccacgct 372
||||||||||||||||||||
Sbjct: 232 acctcggccgcgaccacgct 251
>gb|AW698675.1|AW698675 R10 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 289
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcagg 21
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 353 acctcggccgcgaccacgct 372
||||||||||||||||||||
Sbjct: 270 acctcggccgcgaccacgct 289
>gb|AW698678.1|AW698678 R113 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 252
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 252 tcgagcggccgcccgggcagg 232
>gb|AW698679.1|AW698679 R115 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 418
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcagg 21
>gb|AW698681.1|AW698681 R11 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 168
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcagg 21
>gb|AW698683.1|AW698683 R121 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 527
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcagg 21
>gb|AW698688.1|AW698688 R12 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 356
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 352 tacctcggccgcgaccacgct 372
|||||||||||||||||||||
Sbjct: 336 tacctcggccgcgaccacgct 356
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 cgagcggccgcccgggcagg 22
||||||||||||||||||||
Sbjct: 1 cgagcggccgcccgggcagg 20
>gb|AW698693.1|AW698693 R140 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 380
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 352 tacctcggccgcgaccacgct 372
|||||||||||||||||||||
Sbjct: 21 tacctcggccgcgaccacgct 1
>gb|AW698709.1|AW698709 R84 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 351
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 352 tacctcggccgcgaccacgct 372
|||||||||||||||||||||
Sbjct: 21 tacctcggccgcgaccacgct 1
>gb|AW698893.1|AW698893 r166 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 227
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgc 371
|||||||||||||||||||||
Sbjct: 207 gtacctcggccgcgaccacgc 227
>gb|AW698895.1|AW698895 r3 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 370
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 370 tcgagcggccgcccgggcagg 350
>gb|AW698901.1|AW698901 r97 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 212
Score = 42.1 bits (21), Expect = 3e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 212 tcgagcggccgcccgggcagg 192
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 353 acctcggccgcgaccacgct 372
||||||||||||||||||||
Sbjct: 20 acctcggccgcgaccacgct 1
>gb|AW698348.1|AW698348 G79 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 652
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 353 acctcggccgcgaccacgct 372
||||||||||||||||||||
Sbjct: 20 acctcggccgcgaccacgct 1
>gb|AW698396.1|AW698396 G243 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 316
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 354 cctcggccgcgaccacgcta 373
||||||||||||||||||||
Sbjct: 290 cctcggccgcgaccacgcta 309
>gb|AW698697.1|AW698697 R145 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 354
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 353 acctcggccgcgaccacgct 372
||||||||||||||||||||
Sbjct: 335 acctcggccgcgaccacgct 354
Score = 36.2 bits (18), Expect = 0.017
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 5 agcggccgcccgggcagg 22
||||||||||||||||||
Sbjct: 4 agcggccgcccgggcagg 21
>gb|AW698698.1|AW698698 R146 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 326
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 cgagcggccgcccgggcagg 22
||||||||||||||||||||
Sbjct: 1 cgagcggccgcccgggcagg 20
>gb|AW698707.1|AW698707 R1 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 519
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 353 acctcggccgcgaccacgct 372
||||||||||||||||||||
Sbjct: 21 acctcggccgcgaccacgct 2
>gb|AW698716.1|AW698716 R95 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 434
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 cgagcggccgcccgggcagg 22
||||||||||||||||||||
Sbjct: 1 cgagcggccgcccgggcagg 20
>gb|AW698549.1|AW698549 g346 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 192
Score = 38.2 bits (19), Expect = 0.004
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 350 cgtacctcggccgcgaccacgct 372
||||| |||||||||||||||||
Sbjct: 23 cgtacgtcggccgcgaccacgct 1
>gb|AW698680.1|AW698680 R116 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 290
Score = 38.2 bits (19), Expect = 0.004
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 353 acctcggccgcgaccacgc 371
|||||||||||||||||||
Sbjct: 19 acctcggccgcgaccacgc 1
>gb|AW698711.1|AW698711 R89 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 343
Score = 38.2 bits (19), Expect = 0.004
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 4 gagcggccgcccgggcagg 22
|||||||||||||||||||
Sbjct: 341 gagcggccgcccgggcagg 323
Score = 34.2 bits (17), Expect = 0.066
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacg 370
|||||||||||| |||||||
Sbjct: 22 gtacctcggccgngaccacg 3
>gb|AJ888497.1|AJ888497 AJ888497 Medicago sativa subsp. x varia 4-day-old Medicago sativa
subsp. x varia cDNA, mRNA sequence
Length = 561
Score = 38.2 bits (19), Expect = 0.004
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 4 gagcggccgcccgggcagg 22
|||||||||||||||||||
Sbjct: 557 gagcggccgcccgggcagg 539
>gb|AW698354.1|AW698354 g40 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 307
Score = 36.2 bits (18), Expect = 0.017
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1 ttcgagcggccgcccgggcagg 22
|||||||||| |||||||||||
Sbjct: 285 ttcgagcggcagcccgggcagg 264
>gb|AW698425.1|AW698425 G276 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 158
Score = 36.2 bits (18), Expect = 0.017
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
|||| |||||||||||||||||
Sbjct: 22 gtacgtcggccgcgaccacgct 1
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 622
Number of Sequences: 7669
Number of extensions: 622
Number of successful extensions: 308
Number of sequences better than 0.5: 69
Number of HSP's better than 0.5 without gapping: 68
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 217
Number of HSP's gapped (non-prelim): 92
length of query: 373
length of database: 3,745,706
effective HSP length: 15
effective length of query: 358
effective length of database: 3,630,671
effective search space: 1299780218
effective search space used: 1299780218
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)