BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716236.2.1
(843 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO514742.1|CO514742 s13dSG55F0200027_328144 Glandular tr... 206 2e-053
gb|CO512082.1|CO512082 s13dSG18F0600047_108484 Glandular tr... 180 1e-045
gb|CO514307.1|CO514307 s13dSG76H0900076_157276 Glandular tr... 174 7e-044
gb|CO516470.1|CO516470 s13dSG28C0900068_446268 Glandular tr... 174 7e-044
gb|CO514801.1|CO514801 s13dSG59D0300030_328262 Glandular tr... 165 6e-041
gb|AW698741.1|AW698741 r315 non-glandular-haired subtracted... 147 1e-035
gb|CO515876.1|CO515876 s13dSG91B0900075_421291 Glandular tr... 109 3e-024
gb|CO511830.1|CO511830 s13dSG02E0400035_103560 Glandular tr... 98 1e-020
gb|CO512153.1|CO512153 s13dSG34E0900067_108626 Glandular tr... 98 1e-020
gb|AJ410088.1|AJ410088 AJ410088 Medicago sativa library (Ka... 78 1e-014
gb|CO513129.1|CO513129 s13dSG23C0100002_129422 Glandular tr... 78 1e-014
gb|AW698350.1|AW698350 g29 glandular-haired subtracted cDNA... 42 6e-004
gb|AW698675.1|AW698675 R10 non-glandular-haired subtracted ... 42 6e-004
gb|AW698715.1|AW698715 R93 non-glandular-haired subtracted ... 42 6e-004
gb|AW698341.1|AW698341 G143 glandular-haired subtracted cDN... 40 0.002
gb|AW698345.1|AW698345 G73 glandular-haired subtracted cDNA... 40 0.002
gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA... 40 0.002
gb|AW698351.1|AW698351 g32 glandular-haired subtracted cDNA... 40 0.002
gb|AW698352.1|AW698352 g34 glandular-haired subtracted cDNA... 40 0.002
gb|AW698672.1|AW698672 R103 non-glandular-haired subtracted... 40 0.002
gb|AW698681.1|AW698681 R11 non-glandular-haired subtracted ... 40 0.002
gb|AW698683.1|AW698683 R121 non-glandular-haired subtracted... 40 0.002
gb|AW698685.1|AW698685 R125 non-glandular-haired subtracted... 40 0.002
gb|AW698688.1|AW698688 R12 non-glandular-haired subtracted ... 40 0.002
gb|AW698697.1|AW698697 R145 non-glandular-haired subtracted... 40 0.002
gb|AW698698.1|AW698698 R146 non-glandular-haired subtracted... 40 0.002
gb|AW698716.1|AW698716 R95 non-glandular-haired subtracted ... 40 0.002
gb|AW698886.1|AW698886 r151 non-glandular-haired subtracted... 40 0.002
gb|AW698901.1|AW698901 r97 non-glandular-haired subtracted ... 40 0.002
gb|AW698338.1|AW698338 G1 glandular-haired subtracted cDNA ... 36 0.039
gb|AW698678.1|AW698678 R113 non-glandular-haired subtracted... 36 0.039
gb|AW698679.1|AW698679 R115 non-glandular-haired subtracted... 36 0.039
gb|AW698699.1|AW698699 R149 non-glandular-haired subtracted... 36 0.039
gb|AW698711.1|AW698711 R89 non-glandular-haired subtracted ... 36 0.039
gb|AW698717.1|AW698717 R96 non-glandular-haired subtracted ... 36 0.039
gb|AW698718.1|AW698718 R98 non-glandular-haired subtracted ... 36 0.039
gb|AW698895.1|AW698895 r3 non-glandular-haired subtracted c... 36 0.039
gb|AJ888497.1|AJ888497 AJ888497 Medicago sativa subsp. x va... 36 0.039
gb|AW698777.1|AW698777 r361 non-glandular-haired subtracted... 34 0.15
>gb|CO514742.1|CO514742 s13dSG55F0200027_328144 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 526
Score = 206 bits (104), Expect = 2e-053
Identities = 362/448 (80%)
Strand = Plus / Minus
Query: 265 tcatcccatggcatatttctgggtccagctgcgggctgttgcctcgtacttaggccgatc 324
||||||||||||||| ||||| ||||||||||| || || || || ||||| | || ||
Sbjct: 520 tcatcccatggcatacttctgtgtccagctgcgtgcggtggcttcatacttggtcctgtc 461
Query: 325 cgtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaag 384
||||||||||| || ||||| ||||| ||||| ||||| || || |||||||| || |
Sbjct: 460 agtcttgtacatatgtgcaatttcaggcacaagcggatcatcgggattgggatccgtcac 401
Query: 385 cagggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctt 444
|| |||||||| || | | ||||| || || |||| ||||||||||| || |||||
Sbjct: 400 caatgagcagattgacaaaagcaccttggaaatggtcagtgcagggctccattgttcctt 341
Query: 445 aagaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctt 504
||||||||||||||| || |||||||| || ||||||||||| ||||| ||||| ||| |
Sbjct: 340 aagaatgtcgagacaaatacttccattgctgttgatgtttgggtggaataccttagtcct 281
Query: 505 aaaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaa 564
||| | |||||||| |||||||| || || ||||| || |||||||| || || ||
Sbjct: 280 aaatgcaacctttggtggcttgaatggataatccggaggaaaatgaattgaaaccaaaaa 221
Query: 565 aacacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| |||||||| || ||||||| ||| |||||||| ||||| ||||| || |||||
Sbjct: 220 cacaccaccagcataggggctatcagcaggtcccatgattgttgcttgccaatgaaacat 161
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
|||||| | ||||||||||||||||||| ||||| || ||||| |||| ||||| |
Sbjct: 160 gtcctcagccacaggacctgcactgcatgatgttggtggatccttctgcaaatccttgag 101
Query: 685 ttccttgaggatacgttttgatgccatg 712
||||||||||| ||||| |||||||||
Sbjct: 100 ctccttgaggatccgtttcgatgccatg 73
>gb|CO512082.1|CO512082 s13dSG18F0600047_108484 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 587
Score = 180 bits (91), Expect = 1e-045
Identities = 313/387 (80%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| || ||||| ||||| ||||| ||||| || || |||||||| || | |
Sbjct: 583 gtcttgtacatatgtgcaatttcaggcacaagcggatcatcgggattgggatccgtcaac 524
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| |||||||| || | | ||||| || || |||| ||||||||||| || ||||||
Sbjct: 523 aatgagcagattgacaaaagcaccttggaaatggtcagtgcagggctccattgttcctta 464
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
|||||||||||||| || |||||||| || ||||||||||| ||||| ||||| ||| ||
Sbjct: 463 agaatgtcgagacaaatacttccattgctgttgatgtttgggtggaataccttagtccta 404
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | |||||||| |||||||| || || ||||| || |||||||| || || ||
Sbjct: 403 aatgcaacctttggtggcttgaatggataatccggaggaaaatgaattgaaaccaaaaac 344
Query: 566 acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacata 625
||||| |||||||| || ||||||| ||| |||||||| ||||| ||||| || |||||
Sbjct: 343 acaccaccagcataggggctatcagcaggtcccatgattgttgcttgccaatgaaacatg 284
Query: 626 tcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaat 685
|||||| | ||||||||||||||||||| ||||| || ||||| |||| ||||| |
Sbjct: 283 tcctcagccacaggacctgcactgcatgatgttggtggatccttctgcaaatccttgagc 224
Query: 686 tccttgaggatacgttttgatgccatg 712
||||||||||| ||||| |||||||||
Sbjct: 223 tccttgaggatccgtttcgatgccatg 197
>gb|CO514307.1|CO514307 s13dSG76H0900076_157276 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 490
Score = 174 bits (88), Expect = 7e-044
Identities = 238/288 (82%)
Strand = Plus / Minus
Query: 425 gcagggctccactgctccttaagaatgtcgagacatatgcttccattactattgatgttt 484
||||||||||| || |||||||||||||||||||| || |||||||| || |||||||||
Sbjct: 386 gcagggctccattgttccttaagaatgtcgagacaaatacttccattgctgttgatgttt 327
Query: 485 ggatggaagaccttcgtcttaaaagatacctttggaggcttgaaagggtagtccgggggg 544
|| ||||| ||||| ||| |||| | |||||||| |||||||| || || ||||| ||
Sbjct: 326 gggtggaataccttagtcctaaatgcaacctttggtggcttgaatggataatccggagga 267
Query: 545 aaatgaatgttcactaagaaaacacctccagcatatggactatcaggaggacccatgatg 604
|||||||| || || || ||||| |||||||| || ||||||| ||| ||||||||
Sbjct: 266 aaatgaattgaaaccaaaaacacaccaccagcataggggctatcagcaggtcccatgatt 207
Query: 605 gttgcctgccagtggaacatatcctcaccagcaggacctgcactgcatgacgttggaggg 664
||||| ||||| || ||||| |||||| | ||||||||||||||||||| ||||| ||
Sbjct: 206 gttgcttgccaatgaaacatgtcctcagccacaggacctgcactgcatgatgttggtgga 147
Query: 665 tccttttgcaggtcctttaattccttgaggatacgttttgatgccatg 712
||||| |||| ||||| | ||||||||||| ||||| |||||||||
Sbjct: 146 tccttctgcaaatccttgagctccttgaggatccgtttcgatgccatg 99
>gb|CO516470.1|CO516470 s13dSG28C0900068_446268 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 418
Score = 174 bits (88), Expect = 7e-044
Identities = 238/288 (82%)
Strand = Plus / Minus
Query: 425 gcagggctccactgctccttaagaatgtcgagacatatgcttccattactattgatgttt 484
||||||||||| || |||||||||||||||||||| || |||||||| || |||||||||
Sbjct: 361 gcagggctccattgttccttaagaatgtcgagacaaatacttccattgctgttgatgttt 302
Query: 485 ggatggaagaccttcgtcttaaaagatacctttggaggcttgaaagggtagtccgggggg 544
|| ||||| ||||| ||| |||| | |||||||| |||||||| || || ||||| ||
Sbjct: 301 gggtggaataccttagtcctaaatgcaacctttggtggcttgaatggataatccggagga 242
Query: 545 aaatgaatgttcactaagaaaacacctccagcatatggactatcaggaggacccatgatg 604
|||||||| || || || ||||| |||||||| || ||||||| ||| ||||||||
Sbjct: 241 aaatgaattgaaaccaaaaacacaccaccagcataggggctatcagcaggtcccatgatt 182
Query: 605 gttgcctgccagtggaacatatcctcaccagcaggacctgcactgcatgacgttggaggg 664
||||| ||||| || ||||| |||||| | ||||||||||||||||||| ||||| ||
Sbjct: 181 gttgcttgccaatgaaacatgtcctcagccacaggacctgcactgcatgatgttggtgga 122
Query: 665 tccttttgcaggtcctttaattccttgaggatacgttttgatgccatg 712
||||| |||| ||||| | ||||||||||| ||||| |||||||||
Sbjct: 121 tccttctgcaaatccttgagctccttgaggatccgtttcgatgccatg 74
>gb|CO514801.1|CO514801 s13dSG59D0300030_328262 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 586
Score = 165 bits (83), Expect = 6e-041
Identities = 206/247 (83%)
Strand = Plus / Minus
Query: 428 gggctccactgctccttaagaatgtcgagacatatgcttccattactattgatgtttgga 487
||||||||||| ||||| ||||||||||||||||| || |||||||| |||||||||||
Sbjct: 368 gggctccactgttccttcagaatgtcgagacatatactgccattactgttgatgtttggg 309
Query: 488 tggaagaccttcgtcttaaaagatacctttggaggcttgaaagggtagtccggggggaaa 547
||||| ||||| ||| |||||| ||||||| |||||||| || ||||| || || |||
Sbjct: 308 tggaacaccttggtcctaaaagcaccctttggtggcttgaagggatagtcaggaggaaaa 249
Query: 548 tgaatgttcactaagaaaacacctccagcatatggactatcaggaggacccatgatggtt 607
||||| || | ||| ||||| |||| |||||| ||||||| || |||||||| ||
Sbjct: 248 tgaattgaaaccaggaacacaccaccagtatatgggctatcagccggtcccatgattgtg 189
Query: 608 gcctgccagtggaacatatcctcaccagcaggacctgcactgcatgacgttggagggtcc 667
|| |||||||||||||| |||||| | ||||||||||||||||||| ||||| ||||||
Sbjct: 188 gcttgccagtggaacatgtcctcagccacaggacctgcactgcatgaagttggggggtcc 129
Query: 668 ttttgca 674
|| ||||
Sbjct: 128 ttctgca 122
Score = 77.8 bits (39), Expect = 1e-014
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 265 tcatcccatggcatatttctgggtccagctgcgggctgttgcctcgtacttaggccgatc 324
||||||||||||||| ||||| ||||||||||| ||||| || || || || | || ||
Sbjct: 531 tcatcccatggcatacttctgtgtccagctgcgagctgtggcttcatatttggccctgtc 472
Query: 325 cgtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttggg 375
|||||||||||||| ||||| ||||| ||||| ||||| || ||||||||
Sbjct: 471 ggtcttgtacatgtgtgcaatttcaggaacaagtggatcatcggggttggg 421
>gb|AW698741.1|AW698741 r315 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 335
Score = 147 bits (74), Expect = 1e-035
Identities = 196/237 (82%)
Strand = Plus / Plus
Query: 425 gcagggctccactgctccttaagaatgtcgagacatatgcttccattactattgatgttt 484
||||||||||| || |||||||||||||||||||| || |||||||| || |||||||||
Sbjct: 92 gcagggctccattgttccttaagaatgtcgagacaaatacttccattgctgttgatgttt 151
Query: 485 ggatggaagaccttcgtcttaaaagatacctttggaggcttgaaagggtagtccgggggg 544
|| ||||| ||||| ||| || | | |||||||| |||||||| || || ||||| ||
Sbjct: 152 gggtggaataccttagtcctanatgcaacctttggtggcttgaatggataatccggagga 211
Query: 545 aaatgaatgttcactaagaaaacacctccagcatatggactatcaggaggacccatgatg 604
|||||||| || || || ||||| |||||||| || ||||||| ||| ||||||||
Sbjct: 212 aaatgaattgaaaccaaaaacacaccaccagcataggggctatcagcaggtcccatgatt 271
Query: 605 gttgcctgccagtggaacatatcctcaccagcaggacctgcactgcatgacgttgga 661
||||| ||||| || ||||| |||||| | ||||||||||||||||||| ||||||
Sbjct: 272 gttgcttgccaatgaaacatgtcctcagccacaggacctgcactgcatgatgttgga 328
>gb|CO515876.1|CO515876 s13dSG91B0900075_421291 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 518
Score = 109 bits (55), Expect = 3e-024
Identities = 292/371 (78%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||| || ||||| || | ||||| |||||||| ||||| || | |
Sbjct: 478 gtcttgtacatatgagctatttcaggcactaagggatcatctgggtttggatccgtcaac 419
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
||||| || || || | || |||||||| ||||||||||| |||||||||||||||||
Sbjct: 418 agggaacaaatggataacagcaccttagatattgtcaaagcggggctccactgctccttc 359
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| || || ||||| ||||| ||||| || ||||| ||||| ||||| || || ||| ||
Sbjct: 358 aagatatcaagacaaatgctaccattgctgttgatatttgggtggaaaactttggtccta 299
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || ||||||||| | |||| |||
Sbjct: 298 aatgcaaccttgggtggcttgaatggataatcaggaggaaaatgaatggtaactagaaaa 239
Query: 566 acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacata 625
|| ||||| ||||| || ||||| || |||||||| || ||||| ||||| || |||||
Sbjct: 238 actcctccggcataagggctatcggggggacccattatagttgcttgccaatgaaacatg 179
Query: 626 tcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaat 685
|| || | |||| || || ||||| || |||||||| || || || |||||||| | |
Sbjct: 178 tcttctgctacagggccagcgctgcaagaggttggaggatctttctgaaggtccttgagt 119
Query: 686 tccttgaggat 696
|||||||||||
Sbjct: 118 tccttgaggat 108
>gb|CO511830.1|CO511830 s13dSG02E0400035_103560 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 519
Score = 97.6 bits (49), Expect = 1e-020
Identities = 288/365 (78%), Gaps = 2/365 (0%)
Strand = Plus / Minus
Query: 327 tcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagca 386
|||||||||| |||||||| |||||||| |||||||| ||||||||||||||||| | ||
Sbjct: 478 tcttgtacatatgagcaatttcagggaccagaggatcatctgggttgggatcagtcaaca 419
Query: 387 gggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctccttaa 446
| || || || || || | ||||| || ||||| || ||||||||||| ||||| || |
Sbjct: 418 gagaacaaatggacagtagcaccttggatattgtgaaggcagggctccattgctctttca 359
Query: 447 gaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtcttaa 506
| ||||| || || ||||| || ||||| ||||| || || ||||| ||||| || |
Sbjct: 358 ggatgtcaaggcaaatgctaccgttactgttgatattagggtggaaaacctttgtgcgga 299
Query: 507 aagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa- 565
| || ||||| || || |||||||| || ||||| ||||| ||||| | ||| ||||||
Sbjct: 298 atgaaaccttgggtggtttgaaaggataatccggagggaagtgaatttgcac-aagaaac 240
Query: 566 acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacata 625
|||||||| ||| |||| ||||| || ||||| || || || ||||| |||||||||
Sbjct: 239 acacctcccgcaaatgggctatctcctgggcccataattgtagcttgccaatggaacata 180
Query: 626 tcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaat 685
|| ||| | |||| || |||||||| || | ||||| ||||| |||| |||||| |||
Sbjct: 179 tcatcagcgacagggccagcactgcaagaagcaggaggatccttctgcaagtccttcaat 120
Query: 686 tcctt 690
|||||
Sbjct: 119 tcctt 115
>gb|CO512153.1|CO512153 s13dSG34E0900067_108626 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 582
Score = 97.6 bits (49), Expect = 1e-020
Identities = 286/365 (78%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
|||||||||||||| ||||| ||||| || | |||||| |||||||| ||||| || |||
Sbjct: 470 gtcttgtacatgtgggcaatatcaggcaccaaaggatcatctgggtttggatctgtcagc 411
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
|| ||||| || || |||| ||||| || | || | |||||| ||||||||||| ||
Sbjct: 410 agagagcaaattgacagcaggaccttcgaaacagtaagagcaggactccactgctctttc 351
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
|||||||| ||||| || || ||||| || |||||||| || ||||| || || || |
Sbjct: 350 agaatgtcaagacagatactcccattgctgttgatgttagggtggaacacttttgttcga 291
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| || |||||||| ||||| | || || || || ||||| |||||| |||||| |||
Sbjct: 290 aaggaaacctttggtggcttagatggataatctggtgggaagtgaatggtcactaggaat 231
Query: 566 acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacata 625
||||| |||||||| ||||| || | || |||||||| || || ||||| || ||||
Sbjct: 230 acaccaccagcataaggactgtctgccggtcccatgatagtagcttgccaatgaaacagg 171
Query: 626 tcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaat 685
|| |||||| |||| || |||||||| ||| |||||||| || |||| |||||| ||
Sbjct: 170 tcttcaccaacagggccagcactgcaagacacaggagggtctttctgcaagtccttcaac 111
Query: 686 tcctt 690
|||||
Sbjct: 110 tcctt 106
>gb|AJ410088.1|AJ410088 AJ410088 Medicago sativa library (Kalo P) Medicago sativa cDNA
clone L482, mRNA sequence
Length = 320
Score = 77.8 bits (39), Expect = 1e-014
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 327 tcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagt 381
|||||||||| |||||||| |||||||| |||||||| |||||||||||||||||
Sbjct: 56 tcttgtacatatgagcaatttcagggaccagaggatcatctgggttgggatcagt 2
>gb|CO513129.1|CO513129 s13dSG23C0100002_129422 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 517
Score = 77.8 bits (39), Expect = 1e-014
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 265 tcatcccatggcatatttctgggtccagctgcgggctgttgcctcgtacttaggccgatc 324
||||||||||||||| ||||| ||||||||||| ||||| || || ||||| | || ||
Sbjct: 130 tcatcccatggcatacttctgtgtccagctgcgagctgtggcttcatacttggccctgtc 71
Query: 325 cgtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttggg 375
|||||||||||||| ||| | ||||| ||||| ||||| || ||||||||
Sbjct: 70 ggtcttgtacatgtgtgcagtttcaggaacaagtggatcatcggggttggg 20
>gb|AW698350.1|AW698350 g29 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 274
Score = 42.1 bits (21), Expect = 6e-004
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 823 cgtacctgcccgggcggccgc 843
|||||||||||||||||||||
Sbjct: 250 cgtacctgcccgggcggccgc 270
>gb|AW698675.1|AW698675 R10 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 289
Score = 42.1 bits (21), Expect = 6e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 823 cgtacctgcccgggcggccgc 843
|||||||||||||||||||||
Sbjct: 25 cgtacctgcccgggcggccgc 5
>gb|AW698715.1|AW698715 R93 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 440
Score = 42.1 bits (21), Expect = 6e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 823 cgtacctgcccgggcggccgc 843
|||||||||||||||||||||
Sbjct: 25 cgtacctgcccgggcggccgc 5
>gb|AW698341.1|AW698341 G143 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 264
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 241 gtacctgcccgggcggccgc 260
>gb|AW698345.1|AW698345 G73 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 407
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgc 5
>gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 553
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 112 gtacctgcccgggcggccgc 93
>gb|AW698351.1|AW698351 g32 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 327
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 291 gtacctgcccgggcggccgc 310
>gb|AW698352.1|AW698352 g34 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 365
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 23 gtacctgcccgggcggccgc 4
>gb|AW698672.1|AW698672 R103 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 251
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgc 5
>gb|AW698681.1|AW698681 R11 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 168
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgc 5
>gb|AW698683.1|AW698683 R121 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 527
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgc 5
>gb|AW698685.1|AW698685 R125 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 393
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 370 gtacctgcccgggcggccgc 389
>gb|AW698688.1|AW698688 R12 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 356
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 23 gtacctgcccgggcggccgc 4
>gb|AW698697.1|AW698697 R145 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 354
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgc 5
>gb|AW698698.1|AW698698 R146 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 326
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 23 gtacctgcccgggcggccgc 4
>gb|AW698716.1|AW698716 R95 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 434
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 23 gtacctgcccgggcggccgc 4
>gb|AW698886.1|AW698886 r151 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 129
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgc 5
>gb|AW698901.1|AW698901 r97 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 212
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 824 gtacctgcccgggcggccgc 843
||||||||||||||||||||
Sbjct: 189 gtacctgcccgggcggccgc 208
>gb|AW698338.1|AW698338 G1 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 483
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 826 acctgcccgggcggccgc 843
||||||||||||||||||
Sbjct: 21 acctgcccgggcggccgc 4
>gb|AW698678.1|AW698678 R113 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 252
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 826 acctgcccgggcggccgc 843
||||||||||||||||||
Sbjct: 231 acctgcccgggcggccgc 248
>gb|AW698679.1|AW698679 R115 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 418
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 826 acctgcccgggcggccgc 843
||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgc 5
>gb|AW698699.1|AW698699 R149 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 275
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 826 acctgcccgggcggccgc 843
||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgc 5
>gb|AW698711.1|AW698711 R89 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 343
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 826 acctgcccgggcggccgc 843
||||||||||||||||||
Sbjct: 322 acctgcccgggcggccgc 339
>gb|AW698717.1|AW698717 R96 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 384
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 826 acctgcccgggcggccgc 843
||||||||||||||||||
Sbjct: 363 acctgcccgggcggccgc 380
>gb|AW698718.1|AW698718 R98 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 330
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 826 acctgcccgggcggccgc 843
||||||||||||||||||
Sbjct: 309 acctgcccgggcggccgc 326
>gb|AW698895.1|AW698895 r3 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 370
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 826 acctgcccgggcggccgc 843
||||||||||||||||||
Sbjct: 349 acctgcccgggcggccgc 366
>gb|AJ888497.1|AJ888497 AJ888497 Medicago sativa subsp. x varia 4-day-old Medicago sativa
subsp. x varia cDNA, mRNA sequence
Length = 561
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 826 acctgcccgggcggccgc 843
||||||||||||||||||
Sbjct: 538 acctgcccgggcggccgc 555
>gb|AW698777.1|AW698777 r361 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 340
Score = 34.2 bits (17), Expect = 0.15
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 827 cctgcccgggcggccgc 843
|||||||||||||||||
Sbjct: 312 cctgcccgggcggccgc 328
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1726
Number of Sequences: 7669
Number of extensions: 1726
Number of successful extensions: 540
Number of sequences better than 0.5: 40
Number of HSP's better than 0.5 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 480
Number of HSP's gapped (non-prelim): 47
length of query: 843
length of database: 3,745,706
effective HSP length: 16
effective length of query: 827
effective length of database: 3,623,002
effective search space: 2996222654
effective search space used: 2996222654
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)