BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.76
(854 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO516579.1|CO516579 s13dSG57H0100012_446486 Glandular tr... 198 5e-051
gb|CO513709.1|CO513709 s13dSG15B1200093_140200 Glandular tr... 196 2e-050
gb|DQ122773.1| Medicago sativa clone MH5 pentameric polyubi... 192 3e-049
gb|CO513620.1|CO513620 s13dSG16F1000079_140022 Glandular tr... 188 4e-048
gb|CO516677.1|CO516677 s13dSG74A0900067_446682 Glandular tr... 188 4e-048
gb|CO516696.1|CO516696 s13dSG74C0600040_446720 Glandular tr... 188 4e-048
gb|CO512172.1|CO512172 s13dSG34G1100084_108664 Glandular tr... 184 7e-047
gb|CO512220.1|CO512220 s13dSG03D0800062_113954 Glandular tr... 184 7e-047
gb|CO512463.1|CO512463 s13dSG100C080005_114440 Glandular tr... 172 3e-043
gb|CO513801.1|CO513801 s13dSG82F0900075_156264 Glandular tr... 165 6e-041
gb|CO515210.1|CO515210 s13dSG62H0500048_399285 Glandular tr... 165 6e-041
gb|CO513483.1|CO513483 s13dSG10G1100084_130130 Glandular tr... 161 1e-039
gb|CO516008.1|CO516008 s13dSG61H0300028_445344 Glandular tr... 159 4e-039
gb|CO512489.1|CO512489 s13dSG100F050004_114492 Glandular tr... 147 1e-035
gb|CO513343.1|CO513343 s13dSG37H0600048_129850 Glandular tr... 117 1e-026
gb|AJ888493.1|AJ888493 AJ888493 Medicago sativa subsp. x va... 105 5e-023
gb|CO511748.1|CO511748 s13dSG01F0400043_103396 Glandular tr... 90 3e-018
gb|CO513808.1|CO513808 s13dSG82G1100084_156278 Glandular tr... 76 5e-014
gb|CO516622.1|CO516622 s13dSG66D0300026_446572 Glandular tr... 76 5e-014
gb|DQ122803.1| Medicago sativa clone QG3 unknown mRNA 66 4e-011
gb|AJ966546.1|AJ966546 AJ966546 Medicago sativa subsp. falc... 36 0.039
gb|AJ966569.1|AJ966569 AJ966569 Medicago sativa subsp. falc... 36 0.039
gb|AJ966570.1|AJ966570 AJ966570 Medicago sativa subsp. falc... 36 0.039
>gb|CO516579.1|CO516579 s13dSG57H0100012_446486 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 472
Score = 198 bits (100), Expect = 5e-051
Identities = 310/380 (81%)
Strand = Plus / Minus
Query: 360 atcttcttcttggccctcagctggttgctgtgaccacacttcttcttgcggcagttgaca 419
||||||||||| | ||||| ||| || ||||||||||||||||| || | |||||| |||
Sbjct: 411 atcttcttctttggcctcaactgattactgtgaccacacttctttttcctgcagttcaca 352
Query: 420 gccctagggtgcagtcgtgcatagcatttgcggcagatcatcttgtcctggttgtacttg 479
||||| || ||||| || |||||||||||||||||||| ||||||| |||||||| ||
Sbjct: 351 gcccttggatgcagacgagcatagcatttgcggcagatggtcttgtcttggttgtatttc 292
Query: 480 cgagcgagcgcctgcagagagggctcaatgattccaccgcggagcctaagcacgaggtgg 539
| ||| | ||| || ||| |||||||| || ||||| || ||||||||||| || ||
Sbjct: 291 ctagccaaagccatcaaagaaggctcaataataccaccacgaagcctaagcacaagatgc 232
Query: 540 agcgtagactccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttc 599
| |||||||||||||| ||||| || || || ||||| | ||||| || ||||| ||
Sbjct: 231 aatgtagactccttttgaatgttgtaatcagctagggttcttccatcttcaagctgtttt 172
Query: 600 ccggcaaagatcagccgctgctggtccggcgggatcccttccttgtcctggatcttggcc 659
|| ||||| |||| |||||||| || || ||||| ||||| ||||| || ||||||||
Sbjct: 171 ccagcaaaaatcaaacgctgctgatctggtgggataccttctttgtcttgaatcttggct 112
Query: 660 ttgacattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagc 719
||||||||||||||||| ||||| |||||||| ||||| || || ||||||||||| ||
Sbjct: 111 ttgacattgtcgatggtatcgctactctcgacttcgagagtaatcgtcttccctgttagg 52
Query: 720 gtcttcacgaagatctgcat 739
|| || ||||| ||||||||
Sbjct: 51 gtttttacgaaaatctgcat 32
>gb|CO513709.1|CO513709 s13dSG15B1200093_140200 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 509
Score = 196 bits (99), Expect = 2e-050
Identities = 315/387 (81%)
Strand = Plus / Minus
Query: 356 cttgatcttcttcttggccctcagctggttgctgtgaccacacttcttcttgcggcagtt 415
||||||||||||||| | ||||| |||||||||||| || |||||||| || | ||||||
Sbjct: 436 cttgatcttcttctttggcctcaactggttgctgtgtccgcacttctttttcctgcagtt 377
Query: 416 gacagccctagggtgcagtcgtgcatagcatttgcggcagatcatcttgtcctggttgta 475
|||||| | |||||| | ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 376 gacagcacgagggtgtaaacgtgcatagcacttgcggcagatagtcttatcctggttata 317
Query: 476 cttgcgagcgagcgcctgcagagagggctcaatgattccaccgcggagcctaagcacgag 535
||| | || | |||| || ||| ||||||||||||||||| || ||||| | || ||
Sbjct: 316 cttcctggccaacgccatcaaagaaggctcaatgattccaccacgaagcctcaaaacaag 257
Query: 536 gtggagcgtagactccttttggatgttatagtccgcaagggtgcggccatcctccagctg 595
|| | || || || || |||||||| ||||| |||||||| || ||||| |||| |||
Sbjct: 256 atgcaaagttgattctttctggatgttgtagtcagcaagggtacgtccatcttccaactg 197
Query: 596 cttcccggcaaagatcagccgctgctggtccggcgggatcccttccttgtcctggatctt 655
||| ||||| ||||||| || |||||||||||| || || ||||| || ||||| |||||
Sbjct: 196 ctttccggcgaagatcaacctctgctggtccgggggaattccttctttatcctgaatctt 137
Query: 656 ggccttgacattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgt 715
|| ||||| |||||||| |||||||| ||| ||||| |||||||| ||||| || ||
Sbjct: 136 agctttgacgttgtcgatagtgtcgcttgactccacctcaagggtgatagtcttgccggt 77
Query: 716 cagcgtcttcacgaagatctgcatctt 742
|| || ||||||||||||||||||||
Sbjct: 76 gagggttttcacgaagatctgcatctt 50
>gb|DQ122773.1| Medicago sativa clone MH5 pentameric polyubiquitin mRNA, partial
cds
Length = 571
Score = 192 bits (97), Expect = 3e-049
Identities = 172/197 (87%)
Strand = Plus / Minus
Query: 543 gtagactccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccg 602
||||| ||||| |||||||| ||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 265 gtagattccttctggatgttgtagtcagcaagggtgcggccgtcctcaagctgctttccg 206
Query: 603 gcaaagatcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttg 662
|| ||||||| || |||||||||||| || || ||||||||||||||||||||||| ||
Sbjct: 205 gcgaagatcaacctctgctggtccggaggaataccttccttgtcctggatcttggctttc 146
Query: 663 acattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtc 722
|| ||||||||||||||| ||| || ||||| |||||||| ||||||||||| || |||
Sbjct: 145 acgttgtcgatggtgtcggagctttcaacctcaagggtgatagtcttccctgtgagggtc 86
Query: 723 ttcacgaagatctgcat 739
|| ||||||||||||||
Sbjct: 85 ttaacgaagatctgcat 69
Score = 111 bits (56), Expect = 8e-025
Identities = 128/152 (84%)
Strand = Plus / Minus
Query: 588 tccagctgcttcccggcaaagatcagccgctgctggtccggcgggatcccttccttgtcc 647
|||| |||||| || || ||||| |||| ||||||||| || || || ||||| ||||||
Sbjct: 448 tccaactgctttccagcgaagataagcctctgctggtctgggggaattccttctttgtcc 389
Query: 648 tggatcttggccttgacattgtcgatggtgtcgctgctctcgacctcgagggtgatggtc 707
||||||||||||||||||||||| |||||||| || || ||||| ||||||||||||
Sbjct: 388 tggatcttggccttgacattgtcaatggtgtcagaactttccacctcaagggtgatggtc 329
Query: 708 ttccctgtcagcgtcttcacgaagatctgcat 739
|| || || || ||||| ||||||||||||||
Sbjct: 328 ttgccggtaagggtcttgacgaagatctgcat 297
>gb|CO513620.1|CO513620 s13dSG16F1000079_140022 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 561
Score = 188 bits (95), Expect = 4e-048
Identities = 314/387 (81%)
Strand = Plus / Minus
Query: 356 cttgatcttcttcttggccctcagctggttgctgtgaccacacttcttcttgcggcagtt 415
||||||||||||||| | ||||| |||||||||||| || |||||||| || | ||||||
Sbjct: 434 cttgatcttcttctttggcctcaactggttgctgtgtccgcacttctttttcctgcagtt 375
Query: 416 gacagccctagggtgcagtcgtgcatagcatttgcggcagatcatcttgtcctggttgta 475
|||||| | ||| || | ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 374 gacagcacgaggatgtaaacgtgcatagcacttgcggcagatagtcttatcctggttata 315
Query: 476 cttgcgagcgagcgcctgcagagagggctcaatgattccaccgcggagcctaagcacgag 535
||| | || | |||| || ||| ||||||||||||||||| || ||||| | || ||
Sbjct: 314 cttcctggccaacgccatcaaagaaggctcaatgattccaccacgaagcctcaaaacaag 255
Query: 536 gtggagcgtagactccttttggatgttatagtccgcaagggtgcggccatcctccagctg 595
|| | || || || || |||||||| ||||| |||||||| || ||||| |||| |||
Sbjct: 254 atgcaaagttgattctttctggatgttgtagtcagcaagggtacgtccatcttccaactg 195
Query: 596 cttcccggcaaagatcagccgctgctggtccggcgggatcccttccttgtcctggatctt 655
||| ||||| ||||||| || |||||||||||| || || ||||| || ||||| |||||
Sbjct: 194 ctttccggcgaagatcaacctctgctggtccgggggaattccttctttatcctgaatctt 135
Query: 656 ggccttgacattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgt 715
|| ||||| |||||||| |||||||| ||| ||||| |||||||| ||||| || ||
Sbjct: 134 agctttgacgttgtcgatagtgtcgcttgactccacctcaagggtgatagtcttgccggt 75
Query: 716 cagcgtcttcacgaagatctgcatctt 742
|| || ||||||||||||||||||||
Sbjct: 74 gagggttttcacgaagatctgcatctt 48
>gb|CO516677.1|CO516677 s13dSG74A0900067_446682 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 534
Score = 188 bits (95), Expect = 4e-048
Identities = 314/387 (81%)
Strand = Plus / Minus
Query: 356 cttgatcttcttcttggccctcagctggttgctgtgaccacacttcttcttgcggcagtt 415
||||||||||||||| | ||||| |||||||||||| || |||||||| || | ||||||
Sbjct: 436 cttgatcttcttctttggcctcaactggttgctgtgtccgcacttctttttcctgcagtt 377
Query: 416 gacagccctagggtgcagtcgtgcatagcatttgcggcagatcatcttgtcctggttgta 475
|||||| | |||||| | ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 376 gacagcacgagggtgtaaacgtgcatagcacttgcggcagatagtcttatcctggttata 317
Query: 476 cttgcgagcgagcgcctgcagagagggctcaatgattccaccgcggagcctaagcacgag 535
||| | || | ||| || ||| ||||||||||||||||| || ||||| | || ||
Sbjct: 316 cttcctggccaaggccatcaaagaaggctcaatgattccaccacgaagcctcaaaacaag 257
Query: 536 gtggagcgtagactccttttggatgttatagtccgcaagggtgcggccatcctccagctg 595
|| | || || || || |||||||| ||||| |||||||| || ||||| |||| |||
Sbjct: 256 atgcaaagttgattctttctggatgttgtagtcagcaagggtacgtccatcttccaactg 197
Query: 596 cttcccggcaaagatcagccgctgctggtccggcgggatcccttccttgtcctggatctt 655
||| ||||| ||||||| || |||||||||||| || || ||||| || ||||| |||||
Sbjct: 196 ctttccggcgaagatcaacctctgctggtccgggggaattccttctttatcctgtatctt 137
Query: 656 ggccttgacattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgt 715
|| ||||| |||||||| |||||||| ||| ||||| |||||||| ||||| || ||
Sbjct: 136 agctttgacgttgtcgatagtgtcgcttgactccacctcaagggtgatagtcttgccggt 77
Query: 716 cagcgtcttcacgaagatctgcatctt 742
|| || ||||||||||||||||||||
Sbjct: 76 gagggttttcacgaagatctgcatctt 50
>gb|CO516696.1|CO516696 s13dSG74C0600040_446720 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 455
Score = 188 bits (95), Expect = 4e-048
Identities = 314/387 (81%)
Strand = Plus / Minus
Query: 356 cttgatcttcttcttggccctcagctggttgctgtgaccacacttcttcttgcggcagtt 415
||||||||||||||| | ||||| |||||||||||| || |||||||| || | ||||||
Sbjct: 436 cttgatcttcttctttggcctcaactggttgctgtgtccgcacttctttttcctgcagtt 377
Query: 416 gacagccctagggtgcagtcgtgcatagcatttgcggcagatcatcttgtcctggttgta 475
|||||| | |||||| | ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 376 gacagcacgagggtgtaaacgtgcatagcacttgcggcagatagtcttatcctggttata 317
Query: 476 cttgcgagcgagcgcctgcagagagggctcaatgattccaccgcggagcctaagcacgag 535
||| | || | ||| || ||| ||||||||||||||||| || ||||| | || ||
Sbjct: 316 cttcctggccaaggccatcaaagaaggctcaatgattccaccacgaagcctcaaaacaag 257
Query: 536 gtggagcgtagactccttttggatgttatagtccgcaagggtgcggccatcctccagctg 595
|| | || || || || |||||||| ||||| |||||||| || ||||| |||| |||
Sbjct: 256 atgcaaagttgattctttctggatgttgtagtcagcaagggtacgtccatcttccaactg 197
Query: 596 cttcccggcaaagatcagccgctgctggtccggcgggatcccttccttgtcctggatctt 655
||| ||||| ||||||| || |||||||||||| || || ||||| || ||||| |||||
Sbjct: 196 ctttccggcgaagatcaacctctgctggtccgggggaattccttctttatcctgtatctt 137
Query: 656 ggccttgacattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgt 715
|| ||||| |||||||| |||||||| ||| ||||| |||||||| ||||| || ||
Sbjct: 136 agctttgacgttgtcgatagtgtcgcttgactccacctcaagggtgatagtcttgccggt 77
Query: 716 cagcgtcttcacgaagatctgcatctt 742
|| || ||||||||||||||||||||
Sbjct: 76 gagggttttcacgaagatctgcatctt 50
>gb|CO512172.1|CO512172 s13dSG34G1100084_108664 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 616
Score = 184 bits (93), Expect = 7e-047
Identities = 171/197 (86%)
Strand = Plus / Minus
Query: 543 gtagactccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccg 602
||||| ||||| |||||||| ||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 509 gtagattccttctggatgttgtagtcagcaagggtgcggccgtcctcgagctgctttccg 450
Query: 603 gcaaagatcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttg 662
|| ||||||| || |||||||||||| || || ||||||||||||||||||||||| ||
Sbjct: 449 gcgaagatcaacctctgctggtccggaggaataccttccttgtcctggatcttggctttc 390
Query: 663 acattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtc 722
|| ||||| ||||||||| ||| |||||||| |||||||||||||| || || || |||
Sbjct: 389 acgttgtctatggtgtcggagctttcgacctcaagggtgatggtcttgccggtgagggtc 330
Query: 723 ttcacgaagatctgcat 739
|| ||||||||||||||
Sbjct: 329 ttaacgaagatctgcat 313
Score = 165 bits (83), Expect = 6e-041
Identities = 167/195 (85%)
Strand = Plus / Minus
Query: 549 tccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccggcaaag 608
||||| |||||||| ||||| || ||||| ||||| ||||| || ||||| ||||| |||
Sbjct: 275 tccttctggatgttgtagtcagctagggtacggccgtcctcaagttgctttccggcgaag 216
Query: 609 atcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttgacattg 668
|| || || ||||||||||| || || |||||||||||||||||||||||||| || |||
Sbjct: 215 ataagacgttgctggtccgggggaattccttccttgtcctggatcttggccttaacgttg 156
Query: 669 tcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtcttcacg 728
|||||||||||| |||||||||||||| ||||||||||| || || || || ||||||
Sbjct: 155 tcgatggtgtcggaactctcgacctcgagagtgatggtcttgccagtgagggttttcacg 96
Query: 729 aagatctgcatcttg 743
||||| |||||||||
Sbjct: 95 aagatttgcatcttg 81
Score = 56.0 bits (28), Expect = 4e-008
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 664 cattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtct 723
||||||| |||||||| ||| || ||||| ||||||||||||| ||| || || ||||
Sbjct: 616 cattgtcaatggtgtcagagctttccacctcaagggtgatggtctgcccggtgagggtct 557
Query: 724 tcacgaagatctgcat 739
| ||||||||||||||
Sbjct: 556 tgacgaagatctgcat 541
>gb|CO512220.1|CO512220 s13dSG03D0800062_113954 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 587
Score = 184 bits (93), Expect = 7e-047
Identities = 171/197 (86%)
Strand = Plus / Minus
Query: 543 gtagactccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccg 602
||||| ||||| |||||||| ||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 509 gtagattccttctggatgttgtagtcagcaagggtgcggccgtcctcgagctgctttccg 450
Query: 603 gcaaagatcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttg 662
|| ||||||| || |||||||||||| || || ||||||||||||||||||||||| ||
Sbjct: 449 gcgaagatcaacctctgctggtccggaggaataccttccttgtcctggatcttggctttc 390
Query: 663 acattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtc 722
|| ||||| ||||||||| ||| |||||||| |||||||||||||| || || || |||
Sbjct: 389 acgttgtctatggtgtcggagctttcgacctcaagggtgatggtcttgccggtgagggtc 330
Query: 723 ttcacgaagatctgcat 739
|| ||||||||||||||
Sbjct: 329 ttaacgaagatctgcat 313
Score = 165 bits (83), Expect = 6e-041
Identities = 167/195 (85%)
Strand = Plus / Minus
Query: 549 tccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccggcaaag 608
||||| |||||||| ||||| || ||||| ||||| ||||| || ||||| ||||| |||
Sbjct: 275 tccttctggatgttgtagtcagctagggtacggccgtcctcaagttgctttccggcgaag 216
Query: 609 atcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttgacattg 668
|| || || ||||||||||| || || |||||||||||||||||||||||||| || |||
Sbjct: 215 ataagacgttgctggtccgggggaattccttccttgtcctggatcttggccttaacgttg 156
Query: 669 tcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtcttcacg 728
|||||||||||| |||||||||||||| ||||||||||| || || || || ||||||
Sbjct: 155 tcgatggtgtcggaactctcgacctcgagagtgatggtcttgccagtgagggttttcacg 96
Query: 729 aagatctgcatcttg 743
||||| |||||||||
Sbjct: 95 aagatttgcatcttg 81
Score = 48.1 bits (24), Expect = 1e-005
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 696 agggtgatggtcttccctgtcagcgtcttcacgaagatctgcat 739
|||||||||||||| || || || ||||| ||||||||||||||
Sbjct: 584 agggtgatggtcttgccggtgagggtcttgacgaagatctgcat 541
>gb|CO512463.1|CO512463 s13dSG100C080005_114440 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 573
Score = 172 bits (87), Expect = 3e-043
Identities = 312/387 (80%)
Strand = Plus / Minus
Query: 356 cttgatcttcttcttggccctcagctggttgctgtgaccacacttcttcttgcggcagtt 415
||||||||||||||| | ||||| || ||||| ||||||||||||||||||||||| ||
Sbjct: 421 cttgatcttcttctttggcctcaattgattgctatgaccacacttcttcttgcggcaatt 362
Query: 416 gacagccctagggtgcagtcgtgcatagcatttgcggcagatcatcttgtcctggttgta 475
|||||||| || || || || ||||| ||||||||||| || | ||||| ||||| ||
Sbjct: 361 cacagccctgggatgaagacgagcataacatttgcggcaaatggttttgtcttggttata 302
Query: 476 cttgcgagcgagcgcctgcagagagggctcaatgattccaccgcggagcctaagcacgag 535
|| | || | ||| || ||| || |||||||| ||||| || ||||| || || ||
Sbjct: 301 tttccttgccaaagccatcaaagaaggttcaatgataccaccacgaagcctgagaacaag 242
Query: 536 gtggagcgtagactccttttggatgttatagtccgcaagggtgcggccatcctccagctg 595
|| || || |||||||| ||||| || || || || | |||||| ||||| || |||||
Sbjct: 241 atgaagagtcgactccttctggatattgtaatcagctaaggtgcgtccatcttcaagctg 182
Query: 596 cttcccggcaaagatcagccgctgctggtccggcgggatcccttccttgtcctggatctt 655
||| || || || |||| |||||||| ||||| || || |||||||| || | |||||
Sbjct: 181 cttaccagcgaaaatcaatcgctgctgatccggtggaataccttccttatctcgaatctt 122
Query: 656 ggccttgacattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgt 715
||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||| ||
Sbjct: 121 tgccttcacattgtcgattgtgtcactgctctcgacctcgagggtgatggttttcccggt 62
Query: 716 cagcgtcttcacgaagatctgcatctt 742
|| || ||||||||||||||||||||
Sbjct: 61 tagggttttcacgaagatctgcatctt 35
>gb|CO513801.1|CO513801 s13dSG82F0900075_156264 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 469
Score = 165 bits (83), Expect = 6e-041
Identities = 167/195 (85%)
Strand = Plus / Minus
Query: 549 tccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccggcaaag 608
||||| |||||||| ||||| || ||||| ||||| ||||| || ||||| ||||| |||
Sbjct: 275 tccttctggatgttgtagtcagctagggtacggccgtcctcaagttgctttccggcgaag 216
Query: 609 atcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttgacattg 668
|| || || ||||||||||| || || |||||||||||||||||||||||||| || |||
Sbjct: 215 ataagacgttgctggtccgggggaattccttccttgtcctggatcttggccttaacgttg 156
Query: 669 tcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtcttcacg 728
|||||||||||| |||||||||||||| ||||||||||| || || || || ||||||
Sbjct: 155 tcgatggtgtcggaactctcgacctcgagagtgatggtcttgccagtgagggttttcacg 96
Query: 729 aagatctgcatcttg 743
||||| |||||||||
Sbjct: 95 aagatttgcatcttg 81
Score = 133 bits (67), Expect = 2e-031
Identities = 133/155 (85%)
Strand = Plus / Minus
Query: 585 tcctccagctgcttcccggcaaagatcagccgctgctggtccggcgggatcccttccttg 644
||||| ||||||| ||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 467 tcctcgagctgctgtccggcgaagatcaacctctgctggtccggaggaataccttccttg 408
Query: 645 tcctggatcttggccttgacattgtcgatggtgtcgctgctctcgacctcgagggtgatg 704
|||||||||||||| || || ||||| ||||||||| ||| |||||||| |||||||||
Sbjct: 407 tcctggatcttggctttcacgttgtctatggtgtcggagctttcgacctcaagggtgatg 348
Query: 705 gtcttccctgtcagcgtcttcacgaagatctgcat 739
||||| || || || ||||| ||||||||||||||
Sbjct: 347 gtcttgccggtgagggtcttaacgaagatctgcat 313
>gb|CO515210.1|CO515210 s13dSG62H0500048_399285 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 404
Score = 165 bits (83), Expect = 6e-041
Identities = 167/195 (85%)
Strand = Plus / Minus
Query: 549 tccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccggcaaag 608
||||| |||||||| ||||| || ||||| ||||| ||||| || ||||| ||||| |||
Sbjct: 278 tccttctggatgttgtagtcagctagggtacggccgtcctcaagttgctttccggcgaag 219
Query: 609 atcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttgacattg 668
|| || || ||||||||||| || || |||||||||||||||||||||||||| || |||
Sbjct: 218 ataagacgttgctggtccgggggaattccttccttgtcctggatcttggccttaacgttg 159
Query: 669 tcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtcttcacg 728
|||||||||||| |||||||||||||| ||||||||||| || || || || ||||||
Sbjct: 158 tcgatggtgtcggaactctcgacctcgagagtgatggtcttgccagtgagggttttcacg 99
Query: 729 aagatctgcatcttg 743
||||| |||||||||
Sbjct: 98 aagatttgcatcttg 84
Score = 81.8 bits (41), Expect = 7e-016
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 651 atcttggccttgacattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttc 710
|||||||| || || ||||||||||||||| ||| || ||||| |||||||| ||||||
Sbjct: 404 atcttggctttcacgttgtcgatggtgtcggagctttcaacctcaagggtgatagtcttc 345
Query: 711 cctgtcagcgtcttcacgaagatctgcat 739
||||| || ||||| ||||||||||||||
Sbjct: 344 cctgtgagggtcttaacgaagatctgcat 316
>gb|CO513483.1|CO513483 s13dSG10G1100084_130130 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 571
Score = 161 bits (81), Expect = 1e-039
Identities = 168/197 (85%)
Strand = Plus / Minus
Query: 543 gtagactccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccg 602
||||| ||||| |||||||| ||||| |||||||||||||| ||||| |||||||| ||
Sbjct: 514 gtagattccttctggatgttgtagtcagcaagggtgcggccgtcctcgagctgctttcca 455
Query: 603 gcaaagatcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttg 662
|| ||||||| || |||||||||||| || || ||||||||||||||||||||||| ||
Sbjct: 454 gcgaagatcaacctctgctggtccgggggaattccttccttgtcctggatcttggctttc 395
Query: 663 acattgtcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtc 722
|| |||||||||||||| ||| || ||||| |||||||| ||||| || || || |||
Sbjct: 394 acgttgtcgatggtgtcagagctttcaacctcaagggtgatagtcttgccggtgagggtc 335
Query: 723 ttcacgaagatctgcat 739
|| ||||||||||||||
Sbjct: 334 ttaacgaagatctgcat 318
Score = 149 bits (75), Expect = 4e-036
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 549 tccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccggcaaag 608
||||| |||||||| ||||| || ||||| ||||| ||||| || ||||| ||||| |||
Sbjct: 280 tccttctggatgttgtagtcagctagggtacggccgtcctcgagttgctttccggcgaag 221
Query: 609 atcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttgacattg 668
|| || || ||||||||||| || || |||||||||||||||||||||||||| || |||
Sbjct: 220 atgagacgttgctggtccgggggaattccttccttgtcctggatcttggccttaacgttg 161
Query: 669 tcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtcttcacg 728
||||||||||| |||||||||||||| ||||| ||||| || || || || ||||||
Sbjct: 160 tcgatggtgtcagaactctcgacctcgagagtgattgtcttgccggtgagggttttcacg 101
Query: 729 aagatctgcatcttg 743
||||| |||||||||
Sbjct: 100 aagatttgcatcttg 86
>gb|CO516008.1|CO516008 s13dSG61H0300028_445344 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 323
Score = 159 bits (80), Expect = 4e-039
Identities = 166/195 (85%)
Strand = Plus / Minus
Query: 549 tccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccggcaaag 608
||||| |||||||| ||||| || ||||| ||||| ||||| || ||||| ||||| |||
Sbjct: 275 tccttctggatgttgtagtcagctagggtacggccgtcctcaagttgctttccggcgaag 216
Query: 609 atcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttgacattg 668
|| || || ||||||||||| || || ||||||||||| |||||||||||||| || |||
Sbjct: 215 ataagacgttgctggtccgggggaattccttccttgtcntggatcttggccttaacgttg 156
Query: 669 tcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtcttcacg 728
|||||||||||| |||||||||||||| ||||||||||| || || || || ||||||
Sbjct: 155 tcgatggtgtcggaactctcgacctcgagagtgatggtcttgccagtgagggttttcacg 96
Query: 729 aagatctgcatcttg 743
||||| |||||||||
Sbjct: 95 aagatttgcatcttg 81
>gb|CO512489.1|CO512489 s13dSG100F050004_114492 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 589
Score = 147 bits (74), Expect = 1e-035
Identities = 164/194 (84%)
Strand = Plus / Minus
Query: 549 tccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccggcaaag 608
|||||||| ||||| || || ||||| ||||| ||||| ||||| ||||| || || ||
Sbjct: 334 tccttttgtatgttgtaatcagcaagagtgcgaccatcttccagttgcttaccagcgaaa 275
Query: 609 atcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttgacattg 668
|||| || ||||||||| || ||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 274 atcaacctctgctggtcaggagggatgccttcattgtcctggatcttggccttgacgttg 215
Query: 669 tcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtcttcacg 728
|||||||||||||| ||||| |||||||| ||||| | ||| || |||| || || |||
Sbjct: 214 tcgatggtgtcgctactctcaacctcgagagtgatagactttccggtcaaagttttgacg 155
Query: 729 aagatctgcatctt 742
||||||||||||||
Sbjct: 154 aagatctgcatctt 141
>gb|CO513343.1|CO513343 s13dSG37H0600048_129850 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 551
Score = 117 bits (59), Expect = 1e-026
Identities = 161/195 (82%)
Strand = Plus / Minus
Query: 549 tccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccggcaaag 608
||||| |||||||| ||||| || || || ||||| || |||| |||||| ||||| |||
Sbjct: 243 tccttctggatgttgtagtcggcgagagtacggccgtcttccaactgctttccggcgaag 184
Query: 609 atcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttgacattg 668
|| || || ||||||||||| || || |||||||| || ||||||||||| ||||| |||
Sbjct: 183 atgagacgttgctggtccggaggaattccttccttatcttggatcttggctttgacgttg 124
Query: 669 tcgatggtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtcttcacg 728
||||| |||||| ||| ||||| ||||| || ||||||||||| || || ||||||
Sbjct: 123 tcgattgtgtcggaagactcaacctcaagggttatcgtcttccctgttagggttttcacg 64
Query: 729 aagatctgcatcttg 743
|||||||||||||||
Sbjct: 63 aagatctgcatcttg 49
>gb|AJ888493.1|AJ888493 AJ888493 Medicago sativa subsp. x varia 4-day-old Medicago sativa
subsp. x varia cDNA, mRNA sequence
Length = 359
Score = 105 bits (53), Expect = 5e-023
Identities = 107/128 (83%)
Strand = Plus / Minus
Query: 615 cgctgctggtccggcgggatcccttccttgtcctggatcttggccttgacattgtcgatg 674
|||||||| ||||| || || ||||||| || || || || ||||| |||| ||||||
Sbjct: 148 cgctgctgatccggtggaataccttcctnatcntgaatnttngccttcacatngtcgatn 89
Query: 675 gtgtcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtcttcacgaagatc 734
||||| |||||||||| |||||||||||||| ||||| || || || ||||||||||||
Sbjct: 88 gtgtcantgctctcgacntcgagggtgatggtnttcccggttagggttttcacgaagatc 29
Query: 735 tgcatctt 742
||||||||
Sbjct: 28 tgcatctt 21
>gb|CO511748.1|CO511748 s13dSG01F0400043_103396 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 534
Score = 89.7 bits (45), Expect = 3e-018
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 579 cggccatcctccagctgcttcccggcaaagatcagccgctgctggtccggcgggatccct 638
|||||||| || |||||||| || ||||| |||| || |||||||| || ||||| ||
Sbjct: 184 cggccatcttcaagctgctttccagcaaaaatcaacctttgctggtctggggggataccc 125
Query: 639 tccttgtcctggatcttggccttgacattgtcgatggtgtcgctgctctcgacctcgagg 698
||||||||||| ||||||||||| |||||||| || ||||| |||||| ||||| |
Sbjct: 124 tccttgtcctgtatcttggccttcacattgtcaattgtgtctgagctctctacctccaaa 65
Query: 699 gtgatggtcttccctgtcagcgtcttcacgaagatctgcat 739
|| || ||||||||||| || |||||||| || ||||||||
Sbjct: 64 gtaattgtcttccctgtaagggtcttcacaaaaatctgcat 24
Score = 56.0 bits (28), Expect = 4e-008
Identities = 95/116 (81%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 534 aggtggagcgtagactccttttggatgttatagtccgcaagggtgcggccatcctccagc 593
||||| || ||||||||||| || ||||| ||||| || ||||| | ||||||||||
Sbjct: 456 aggtgaagagtagactccttctgaatgttgtagtcagccagggtccttccatcctccaat 397
Query: 594 tgcttcccggcaaagatcagccgctgctggtccggcgggatcccttccttgtcctg 649
||||| || |||||||||| || |||||| || || ||||| || |||||||||||
Sbjct: 396 tgctt-ccagcaaagatcaacctctgctgatctggtgggattccctccttgtcctg 342
>gb|CO513808.1|CO513808 s13dSG82G1100084_156278 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 174
Score = 75.8 bits (38), Expect = 5e-014
Identities = 104/126 (82%)
Strand = Plus / Minus
Query: 618 tgctggtccggcgggatcccttccttgtcctggatcttggccttgacattgtcgatggtg 677
|||||||| || || || |||||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 174 tgctggtcaggtggaattccttccttatcctggatcttggctttgacgttgtcgattgtg 115
Query: 678 tcgctgctctcgacctcgagggtgatggtcttccctgtcagcgtcttcacgaagatctgc 737
|| ||| ||||| ||||| || |||||||| || || || |||||||||||||||
Sbjct: 114 tcagaagactcaacctcaagggttatcgtcttcccagttagggttttcacgaagatctgc 55
Query: 738 atcttg 743
||||||
Sbjct: 54 atcttg 49
>gb|CO516622.1|CO516622 s13dSG66D0300026_446572 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 449
Score = 75.8 bits (38), Expect = 5e-014
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 546 gactccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccggca 605
||||| || ||||||||||| ||||| || || |||||||| || || ||||| || |||
Sbjct: 356 gactctttctggatgttataatccgccagagttcggccatcttcaagttgctttccagca 297
Query: 606 aagatcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttgaca 665
|| |||| || |||||||| || ||||| || |||||||| || ||||||||||| |||
Sbjct: 296 aaaatcaacctttgctggtctggggggataccctccttgtcttgtatcttggccttcaca 237
Query: 666 ttgtcgatggtgtc 679
||||| || |||||
Sbjct: 236 ttgtcaattgtgtc 223
Score = 58.0 bits (29), Expect = 1e-008
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 546 gactccttttggatgttatagtccgcaagggtgcggccatcctccagctgcttcccggca 605
||||| || ||||||||||| || || || || | ||||| || |||||||| || |||
Sbjct: 128 gactctttctggatgttataatcagcgagagttcttccatcttcaagctgctttccagca 69
Query: 606 aagatcagccgctgctggtccggcgggatcccttccttgtcctggatcttggccttgaca 665
|| || |||| |||||||||||| || || || ||||||||||| || || ||||| |||
Sbjct: 68 aaaatgagcctctgctggtccgggggaatgccctccttgtcctgaattttagcctttaca 9
Query: 666 ttgtc 670
|||||
Sbjct: 8 ttgtc 4
>gb|DQ122803.1| Medicago sativa clone QG3 unknown mRNA
Length = 504
Score = 65.9 bits (33), Expect = 4e-011
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 534 aggtggagcgtagactccttttggatgttatagtccgcaagggtgcggccatcctccagc 593
||||| || ||||||||||| || ||||| ||||| |||||||| | ||||||||||
Sbjct: 95 aggtgaagagtagactccttctgaatgttgtagtcagcaagggtccttccatcctccaat 36
Query: 594 tgcttcccggcaaagatcagccgctgctg 622
|||||||| |||||||||| || ||||||
Sbjct: 35 tgcttcccagcaaagatcaacctctgctg 7
>gb|AJ966546.1|AJ966546 AJ966546 Medicago sativa subsp. falcata flower buds Medicago sativa
subsp. falcata cDNA clone Em33, mRNA sequence
Length = 151
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 502 gctcaatgattccaccgc 519
||||||||||||||||||
Sbjct: 57 gctcaatgattccaccgc 74
>gb|AJ966569.1|AJ966569 AJ966569 Medicago sativa subsp. falcata flower buds Medicago sativa
subsp. falcata cDNA clone Em3, mRNA sequence
Length = 185
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 502 gctcaatgattccaccgc 519
||||||||||||||||||
Sbjct: 87 gctcaatgattccaccgc 104
>gb|AJ966570.1|AJ966570 AJ966570 Medicago sativa subsp. falcata flower buds Medicago sativa
subsp. falcata cDNA clone Em2, mRNA sequence
Length = 177
Score = 36.2 bits (18), Expect = 0.039
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 502 gctcaatgattccaccgc 519
||||||||||||||||||
Sbjct: 82 gctcaatgattccaccgc 99
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2189
Number of Sequences: 7669
Number of extensions: 2189
Number of successful extensions: 878
Number of sequences better than 0.5: 23
Number of HSP's better than 0.5 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 818
Number of HSP's gapped (non-prelim): 53
length of query: 854
length of database: 3,745,706
effective HSP length: 16
effective length of query: 838
effective length of database: 3,623,002
effective search space: 3036075676
effective search space used: 3036075676
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)