BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBH4g04.xg.3.1
(1549 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK124237.1|CK124237 BES1824108b04 BES1824 Hordeum vulgar... 700 0.0
gb|CK123702.1|CK123702 BES1824105c04 BES1824 Hordeum vulgar... 648 0.0
gb|BQ472695.1|BQ472695 HB01M10r BC Hordeum vulgare subsp. v... 640 0.0
gb|AL503871.1|AL503871 AL503871 Hordeum vulgare Barke roots... 615 e-174
gb|CK124582.1|CK124582 BES1824109l04 BES1824 Hordeum vulgar... 593 e-168
gb|CV056433.1|CV056433 BNEL17F7 Barley EST endosperm librar... 587 e-166
gb|BG415409.1|BG415409 HVSMEk0006G08f Hordeum vulgare testa... 531 e-149
gb|BI959942.1|BI959942 HVSMEn0022H23f Hordeum vulgare rachi... 531 e-149
gb|BU995453.1|BU995453 HM10E21r HM Hordeum vulgare subsp. v... 523 e-147
gb|BU981623.1|BU981623 HA24C13r HA Hordeum vulgare subsp. v... 517 e-145
gb|BI959226.1|BI959226 HVSMEn0018L24f Hordeum vulgare rachi... 515 e-144
gb|BU994746.1|BU994746 HM08B05r HM Hordeum vulgare subsp. v... 513 e-144
gb|BI960113.1|BI960113 HVSMEn0023E13f Hordeum vulgare rachi... 509 e-143
gb|BU980246.1|BU980246 HA20B22r HA Hordeum vulgare subsp. v... 507 e-142
gb|BF254147.3|BF254147 HVSMEf0003C12f Hordeum vulgare seedl... 496 e-138
gb|BI776320.2|BI776320 EBem04_SQ001_J09_R embryo, 12 DPA, n... 496 e-138
gb|BM370819.2|BM370819 EBro04_SQ002_G06_R root, 3 week, sal... 496 e-138
gb|BF267991.2|BF267991 HV_CEa0019I11f Hordeum vulgare seedl... 472 e-131
gb|AL507171.1|AL507171 AL507171 Hordeum vulgare Barke devel... 464 e-129
gb|BQ766977.1|BQ766977 EBro08_SQ007_K16_R root, 3 week, dro... 460 e-128
gb|CA007382.1|CA007382 HU07M08r HU Hordeum vulgare subsp. v... 460 e-128
gb|BF255121.2|BF255121 HVSMEf0006A05f Hordeum vulgare seedl... 458 e-127
gb|CB880871.1|CB880871 HM08B05w HM Hordeum vulgare subsp. v... 456 e-126
gb|BG343619.2|BG343619 HVSMEg0006A18f Hordeum vulgare pre-a... 448 e-124
gb|BF619342.2|BF619342 HVSMEc0016I11f Hordeum vulgare seedl... 444 e-123
gb|BQ468435.1|BQ468435 HM01D23T HM Hordeum vulgare subsp. v... 444 e-123
gb|BI960452.1|BI960452 HVSMEn0024K09f Hordeum vulgare rachi... 436 e-120
gb|BU995659.1|BU995659 HM10P06r HM Hordeum vulgare subsp. v... 436 e-120
gb|AL507576.1|AL507576 AL507576 Hordeum vulgare Barke devel... 426 e-118
gb|BU996404.1|BU996404 HM13H22r HM Hordeum vulgare subsp. v... 426 e-118
gb|CA019577.1|CA019577 HV12G23r HV Hordeum vulgare subsp. v... 422 e-116
gb|BQ469455.1|BQ469455 HM04M12r HM Hordeum vulgare subsp. v... 420 e-116
gb|BQ660955.1|BQ660955 HM01D23w HM Hordeum vulgare subsp. v... 416 e-115
gb|CV060879.1|CV060879 BNEL62c7 Barley EST endosperm librar... 406 e-112
gb|BF263628.2|BF263628 HV_CEa0007D23f Hordeum vulgare seedl... 398 e-109
gb|BI953414.1|BI953414 HVSMEm0012J13f Hordeum vulgare green... 392 e-107
gb|BI959274.1|BI959274 HVSMEn0019A10f Hordeum vulgare rachi... 383 e-104
gb|BQ768499.1|BQ768499 EBro08_SQ011_K21_R root, 3 week, dro... 383 e-104
gb|CA019641.1|CA019641 HV12K08r HV Hordeum vulgare subsp. v... 381 e-104
gb|AW982436.3|AW982436 HVSMEg0003E07f Hordeum vulgare pre-a... 379 e-103
gb|BF263526.1|BF263526 HV_CEa0006P16f Hordeum vulgare seedl... 373 e-101
gb|BI958022.1|BI958022 HVSMEn0012P20f Hordeum vulgare rachi... 369 e-100
gb|BI776391.2|BI776391 EBpi05_SQ001_C05_R pistil, 8 DPA, no... 367 e-100
gb|BM442938.2|BM442938 EBro02_SQ001_P05_R root, 3 week, hyd... 365 3e-099
gb|CB880486.1|CB880486 HM06K24w HM Hordeum vulgare subsp. v... 365 3e-099
gb|BG309049.1|BG309049 HVSMEc0001M03f Hordeum vulgare seedl... 363 1e-098
gb|CV054635.1|CV054635 BNEL111f3 Barley EST endosperm libra... 331 4e-089
gb|BM817353.1|BM817353 HC106A07_T3.ab1 HC Hordeum vulgare s... 321 4e-086
gb|CV060827.1|CV060827 BNEL61f5 Barley EST endosperm librar... 317 6e-085
gb|BM441064.2|BM441064 EBed02_SQ002_F05_R endosperm, 8 DPA,... 313 1e-083
gb|CA015670.1|CA015670 HV12K08u HV Hordeum vulgare subsp. v... 313 1e-083
gb|CB875065.1|CB875065 HX07C23w HX Hordeum vulgare subsp. v... 307 6e-082
gb|BU994332.1|BU994332 HM06K24r HM Hordeum vulgare subsp. v... 305 2e-081
gb|BM097638.2|BM097638 EBem04_SQ002_E14_R embryo, 12 DPA, n... 299 1e-079
gb|BQ469475.1|BQ469475 HM04O21r HM Hordeum vulgare subsp. v... 297 6e-079
gb|CA030478.1|CA030478 HX07C23r HX Hordeum vulgare subsp. v... 291 3e-077
gb|BQ661699.1|BQ661699 HM04O21u HM Hordeum vulgare subsp. v... 278 5e-073
gb|BG343515.2|BG343515 HVSMEg0005P17f Hordeum vulgare pre-a... 276 2e-072
gb|AL510752.1|AL510752 AL510752 Hordeum vulgare Barke devel... 274 8e-072
gb|AL504734.1|AL504734 AL504734 Hordeum vulgare Barke roots... 266 2e-069
gb|BU981504.1|BU981504 HA23N07r HA Hordeum vulgare subsp. v... 260 1e-067
gb|BM442948.2|BM442948 EBro02_SQ002_A03_R root, 3 week, hyd... 256 2e-066
gb|BI957161.1|BI957161 HVSMEn0007N18f Hordeum vulgare rachi... 254 8e-066
gb|BU996346.1|BU996346 HM13F02r HM Hordeum vulgare subsp. v... 244 7e-063
gb|BU996846.1|BU996846 HM14P13r HM Hordeum vulgare subsp. v... 244 7e-063
gb|BU994005.1|BU994005 HM05F15r HM Hordeum vulgare subsp. v... 236 2e-060
gb|BI956768.1|BI956768 HVSMEn0005E01f Hordeum vulgare rachi... 232 3e-059
gb|CB880662.1|CB880662 HM07F15w HM Hordeum vulgare subsp. v... 222 3e-056
gb|BQ766347.1|BQ766347 EBro08_SQ005_P13_R root, 3 week, dro... 212 3e-053
gb|AL502025.1|AL502025 AL502025 Hordeum vulgare Barke roots... 202 2e-050
gb|CB881814.1|CB881814 HM10P06w HM Hordeum vulgare subsp. v... 198 4e-049
gb|CV063359.1|CV063359 BNEL89e1 Barley EST endosperm librar... 184 6e-045
gb|CB880634.1|CB880634 HM07D13w HM Hordeum vulgare subsp. v... 172 2e-041
gb|BG309547.1|BG309547 HVSMEc0010P10f Hordeum vulgare seedl... 168 3e-040
gb|BQ468541.1|BQ468541 HM01I19T HM Hordeum vulgare subsp. v... 167 1e-039
gb|BF065741.3|BF065741 HV_CEb0013L18f Hordeum vulgare seedl... 151 8e-035
gb|BM096949.2|BM096949 EBpi07_SQ001_O10_R pistil, 12 DPA, n... 105 4e-021
gb|AW982287.3|AW982287 HVSMEg0002K20f Hordeum vulgare pre-a... 96 4e-018
gb|CB881599.1|CB881599 HM10E21w HM Hordeum vulgare subsp. v... 92 7e-017
gb|BQ469460.1|BQ469460 HM04N23r HM Hordeum vulgare subsp. v... 86 4e-015
gb|AL504026.1|AL504026 AL504026 Hordeum vulgare Barke roots... 78 1e-012
gb|BF261002.3|BF261002 HVSMEf0023I02f Hordeum vulgare seedl... 78 1e-012
gb|BE214310.3|BE214310 HV_CEb0003B05f Hordeum vulgare seedl... 78 1e-012
gb|BI776502.2|BI776502 EBpi05_SQ001_K06_R pistil, 8 DPA, no... 78 1e-012
gb|BM372605.2|BM372605 EBpi05_SQ003_G23_R pistil, 8 DPA, no... 78 1e-012
gb|BU995807.1|BU995807 HM11G22r HM Hordeum vulgare subsp. v... 78 1e-012
gb|CA001965.1|CA001965 HS06C02r HS Hordeum vulgare subsp. v... 74 2e-011
gb|CA007881.1|CA007881 HU09E12r HU Hordeum vulgare subsp. v... 74 2e-011
gb|BF255233.2|BF255233 HVSMEf0006F01f Hordeum vulgare seedl... 70 2e-010
gb|BG308944.2|BG308944 HVSMEc0001A06f Hordeum vulgare seedl... 70 2e-010
gb|BG368842.2|BG368842 HVSMEi0020O16f Hordeum vulgare 20 DA... 70 2e-010
gb|BQ465041.1|BQ465041 HU02H19r HU Hordeum vulgare subsp. v... 70 2e-010
gb|BQ760999.1|BQ760999 EBro04_SQ001_N02_R root, 3 week, sal... 70 2e-010
gb|CA006762.1|CA006762 HU05K05r HU Hordeum vulgare subsp. v... 70 2e-010
gb|CA012659.1|CA012659 HT06A23r HT Hordeum vulgare subsp. v... 70 2e-010
gb|BF259660.2|BF259660 HVSMEf0019O17f Hordeum vulgare seedl... 44 0.014
gb|BI952055.1|BI952055 HVSMEm0004F23f Hordeum vulgare green... 42 0.054
gb|AV917001.1|AV917001 AV917001 K. Sato unpublished cDNA li... 42 0.054
gb|AV919946.1|AV919946 AV919946 K. Sato unpublished cDNA li... 42 0.054
gb|AV930774.1|AV930774 AV930774 K. Sato unpublished cDNA li... 42 0.054
gb|AJ432033.1|AJ432033 AJ432033 S00002 Hordeum vulgare subs... 42 0.054
gb|AJ463571.1|AJ463571 AJ463571 S00002 Hordeum vulgare subs... 42 0.054
gb|AJ463572.1|AJ463572 AJ463572 S00002 Hordeum vulgare subs... 42 0.054
gb|BQ465135.1|BQ465135 HU02M03r HU Hordeum vulgare subsp. v... 42 0.054
gb|BQ663459.1|BQ663459 HU02M03u HU Hordeum vulgare subsp. v... 42 0.054
gb|BQ663981.1|BQ663981 HU04O04u HU Hordeum vulgare subsp. v... 42 0.054
gb|BQ762917.1|BQ762917 EBro02_SQ006_D15 _R root, 3 week, hy... 42 0.054
gb|CA006386.1|CA006386 HU14I08u HU Hordeum vulgare subsp. v... 42 0.054
gb|CA010091.1|CA010091 HT12A21u HT Hordeum vulgare subsp. v... 42 0.054
gb|CA010109.1|CA010109 HT11I12u HT Hordeum vulgare subsp. v... 42 0.054
gb|CA011299.1|CA011299 HT06B10u HT Hordeum vulgare subsp. v... 42 0.054
gb|CA011637.1|CA011637 HT03C03r HT Hordeum vulgare subsp. v... 42 0.054
gb|BJ544655.1|BJ544655 BJ544655 K. Sato unpublished cDNA li... 42 0.054
gb|BJ544937.1|BJ544937 BJ544937 K. Sato unpublished cDNA li... 42 0.054
gb|BJ546150.1|BJ546150 BJ546150 K. Sato unpublished cDNA li... 42 0.054
gb|BJ546422.1|BJ546422 BJ546422 K. Sato unpublished cDNA li... 42 0.054
gb|BJ550148.1|BJ550148 BJ550148 K. Sato unpublished cDNA li... 42 0.054
>gb|CK124237.1|CK124237 BES1824108b04 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B048 5-PRIME, mRNA sequence
Length = 775
Score = 700 bits (353), Expect = 0.0
Identities = 616/700 (88%), Gaps = 3/700 (0%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 76 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 135
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 136 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 195
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 196 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 255
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 256 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 315
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 316 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 375
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 376 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 435
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|||||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 436 cgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggcg 495
Query: 593 cacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaac 652
||| | |||||||||||||| |||||| | || ||| | |||||||| ||||||||||||
Sbjct: 496 cacgtcgccgccatgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaac 555
Query: 653 -gtgcgcctcccgctctggccgtcgcccgacgccgcacgcgagggcatcctcagcatctg 711
|||||||||||||||||||| ||| || | ||||| ||||| |||||| | ||||||||
Sbjct: 556 ggtgcgcctcccgctctggccctcggcccaggccgcccgcgacggcatcatgagcatctg 615
Query: 712 gaaggaggccgacttcatcaa-ggtcagcgacgacgaggtggccttcctcacgcgcgggg 770
||||||||||||||||||||| ||| |||||||| ||||||||||||||||| | || |
Sbjct: 616 gaaggaggccgacttcatcaagggtgagcgacgatgaggtggccttcctcacccagggcg 675
Query: 771 acgccaacgacgagaagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtcg 830
||||||||||||||||||||||||| ||||| ||||| || || |||||||||||| |||
Sbjct: 676 acgccaacgacgagaagaacgtgctctccctctggttcgagggcctcaagctgctcatcg 735
Query: 831 tca-ccgacggggacaagggatgcaggtacttcaccaagg 869
||| ||||||| || |||||||||||||||||||||||||
Sbjct: 736 tcanccgacggcganaagggatgcaggtacttcaccaagg 775
>gb|CK123702.1|CK123702 BES1824105c04 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C045 5-PRIME, mRNA sequence
Length = 699
Score = 648 bits (327), Expect = 0.0
Identities = 603/694 (86%), Gaps = 1/694 (0%)
Strand = Plus / Plus
Query: 410 gcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttc 469
||||| ||||| ||||||||||| ||||||||| | |||| ||||||||||||||||||
Sbjct: 1 gcgcgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttc 60
Query: 470 tacaggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtg 529
||| | |||||| || ||||||||||| |||||||| ||||| |||||| ||| |
Sbjct: 61 taccgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatc 120
Query: 530 cggcgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcg 589
|| |||||| | | ||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 121 cgccgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcg 180
Query: 590 gcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgacccc 649
|||||| | |||||||||||||| |||||| | || ||| | |||||||| |||||||||
Sbjct: 181 gcgcacgtcgccgccatgcgcgctgccaagtcggccggcatcctctgctcgtacgacccc 240
Query: 650 aacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgagggcatcctcagcatc 709
||||||||||||||||||||||| ||| || | ||||| ||||| |||||| | ||||||
Sbjct: 241 aacgtgcgcctcccgctctggccctcggcccaggccgcccgcgacggcatcatgagcatc 300
Query: 710 tggaaggaggccgacttcatcaaggtcagcgacgacgaggtggccttcctcacgcgcggg 769
|||||||||||||||||||||||||| |||||||| ||||||||||||||||| | ||
Sbjct: 301 tggaaggaggccgacttcatcaaggtgagcgacgatgaggtggccttcctcacccagggc 360
Query: 770 gacgccaacgacgagaagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtc 829
|||||||||||||||||||||||||| ||||| ||||| || || |||||||||||| ||
Sbjct: 361 gacgccaacgacgagaagaacgtgctctccctctggttcgagggcctcaagctgctcatc 420
Query: 830 gtcaccgacggggacaagggatgcaggtacttcaccaaggacttcaagggcagcgtgccc 889
||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 421 gtcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaagggctccgtgccc 480
Query: 890 ggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctc 949
|||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggctactctgtcaacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctc 540
Query: 950 ctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaagctccgcgaggct 1009
|||||||| ||| |||||||||||||||||||| |||| |||| ||||| | ||||
Sbjct: 541 ctcgtcaatgtctccaaggacgactccatcttctacaatgaggccaagctgagggaggtg 600
Query: 1010 ctcaagttctc-caacgcctgcggcgccatctgcaccaccaagaagggcgccatcccggc 1068
|| ||||||| ||||| ||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 601 ctgcagttctcgaaacgcttgcggngccatctgcaccaccaaaaagggagccatcccggg 660
Query: 1069 gctgcccacggtcgccaccgcccaggacctcatc 1102
||||||||| ||||||||||| ||| ||||||
Sbjct: 661 gctgcccaccaccgccaccgccctggagctcatc 694
>gb|BQ472695.1|BQ472695 HB01M10r BC Hordeum vulgare subsp. vulgare cDNA clone HB01M10
5-PRIME, mRNA sequence
Length = 677
Score = 640 bits (323), Expect = 0.0
Identities = 554/631 (87%)
Strand = Plus / Plus
Query: 362 ctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcgcggacggcg 421
|||||||||||| ||| ||| | ||||| |||||||||||| |||||||||| |||||
Sbjct: 11 ctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcgcgcacggcc 70
Query: 422 ctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctacaggaacccg 481
||||||||||| ||||||||| | |||| ||||||||||||||||||||| | ||||||
Sbjct: 71 ctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctaccgcaacccg 130
Query: 482 agcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcggcgcgccagg 541
|| ||||||||||| |||||||| ||||| |||||| ||| | || |||||| |
Sbjct: 131 tcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgccgcgcccgc 190
Query: 542 gtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcgcacatggcc 601
| ||||||||||||||||||||||||||| ||||||| ||||||||||||||| | |||
Sbjct: 191 atcttccactacggctccatctcgctcatcaccgagccctgccgctcggcgcacgtcgcc 250
Query: 602 gccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaacgtgcgcctc 661
||||||||||| |||||| | || ||| | |||||||| |||||||||||||||||||||
Sbjct: 251 gccatgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaacgtgcgcctc 310
Query: 662 ccgctctggccgtcgcccgacgccgcacgcgagggcatcctcagcatctggaaggaggcc 721
||||||||||| ||| || | ||||| ||||| |||||| | ||||||||||||||||||
Sbjct: 311 ccgctctggccctcggcccaggccgcccgcgacggcatcatgagcatctggaaggaggcc 370
Query: 722 gacttcatcaaggtcagcgacgacgaggtggccttcctcacgcgcggggacgccaacgac 781
|||||||||||||| |||||||| ||||||||||||||||| | || ||||||||||||
Sbjct: 371 gacttcatcaaggtgagcgacgatgaggtggccttcctcacccagggcgacgccaacgac 430
Query: 782 gagaagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtcgtcaccgacggg 841
|||||||||||||| ||||| ||||| || || |||||||||||| |||||||||||||
Sbjct: 431 gagaagaacgtgctctccctctggttcgagggcctcaagctgctcatcgtcaccgacggc 490
Query: 842 gacaagggatgcaggtacttcaccaaggacttcaagggcagcgtgcccggcttcaaggtc 901
|| |||||||||||||||||||||||||||||||||||| ||||||||||| | |||
Sbjct: 491 gagaagggatgcaggtacttcaccaaggacttcaagggctccgtgcccggctactctgtc 550
Query: 902 gacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgtcaacgtc 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 551 aacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgtcaatgtc 610
Query: 962 gccaaggacgactccatcttccacaacgagg 992
|||||||||||||||||||| |||| ||||
Sbjct: 611 tccaaggacgactccatcttctacaatgagg 641
>gb|AL503871.1|AL503871 AL503871 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03L01T 5', mRNA sequence
Length = 700
Score = 615 bits (310), Expect = e-174
Identities = 496/558 (88%)
Strand = Plus / Plus
Query: 545 ttccactacggctccatctcgctcatctccgagccgtgccgctcggcgcacatggccgcc 604
||||||||||||||||||||||||||| ||||||| ||||||||||||||| | ||||||
Sbjct: 46 ttccactacggctccatctcgctcatcaccgagccctgccgctcggcgcacgtcgccgcc 105
Query: 605 atgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaacgtgcgcctcccg 664
|||||||| |||||| | || ||| | |||||||| ||||||||||||||||||||||||
Sbjct: 106 atgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaacgtgcgcctcccg 165
Query: 665 ctctggccgtcgcccgacgccgcacgcgagggcatcctcagcatctggaaggaggccgac 724
|||||||| ||| || | ||||| ||||| |||||| | |||||||||||||||||||||
Sbjct: 166 ctctggccctcggcccaggccgcccgcgacggcatcatgagcatctggaaggaggccgac 225
Query: 725 ttcatcaaggtcagcgacgacgaggtggccttcctcacgcgcggggacgccaacgacgag 784
||||||||||| |||||||| ||||||||||||||||| | || |||||||||||||||
Sbjct: 226 ttcatcaaggtgagcgacgatgaggtggccttcctcacccagggcgacgccaacgacgag 285
Query: 785 aagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtcgtcaccgacggggac 844
||||||||||| ||||| ||||| || || |||||||||||| ||||||||||||| ||
Sbjct: 286 aagaacgtgctctccctctggttcgagggcctcaagctgctcatcgtcaccgacggcgag 345
Query: 845 aagggatgcaggtacttcaccaaggacttcaagggcagcgtgcccggcttcaaggtcgac 904
|||||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||
Sbjct: 346 aagggatgcaggtacttcaccaaggacttcaagggctccgtgcccggctactctgtcaac 405
Query: 905 accgtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgtcaacgtcgcc 964
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 406 accgtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgtcaatgtctcc 465
Query: 965 aaggacgactccatcttccacaacgaggagaagctccgcgaggctctcaagttctccaac 1024
|||||||||||||||||| |||| |||| ||||| | |||| || ||||||| |||
Sbjct: 466 aaggacgactccatcttctacaatgaggccaagctgagggaggtgctgcagttctcgaac 525
Query: 1025 gcctgcggcgccatctgcaccaccaagaagggcgccatcccggcgctgcccacggtcgcc 1084
|| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 526 gcttgcggtgccatctgcaccaccaagaagggagccatcccggcgctgcccaccaccgcc 585
Query: 1085 accgcccaggacctcatc 1102
||||||| ||| ||||||
Sbjct: 586 accgccctggagctcatc 603
>gb|CK124582.1|CK124582 BES1824109l04 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010L049 5-PRIME, mRNA sequence
Length = 795
Score = 593 bits (299), Expect = e-168
Identities = 519/591 (87%), Gaps = 1/591 (0%)
Strand = Plus / Plus
Query: 488 gacatgctgctgacggaggcggagctggacctgggcctggtgcggcgcgccagggtgttc 547
||||||||||| |||||||| ||||| |||||| ||| | || |||||| | | |||
Sbjct: 16 gacatgctgctcacggaggccgagctcaacctggacctcatccgccgcgcccgcatcttc 75
Query: 548 cactacggctccatctcgctcatctccgagccgtgccgctcggcgcacatggccgccatg 607
|||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||||
Sbjct: 76 cactacggctccatctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatg 135
Query: 608 cgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaacgtgcgcctcccgctc 667
||||| |||||| | || ||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 136 cgcgctgccaagtcggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctc 195
Query: 668 tggccgtcgcccgacgccgcacgcgagggcatcctcagcatctggaaggaggccgacttc 727
||||| ||| || | ||||| ||||| |||||| | ||||||||||||||||||||||||
Sbjct: 196 tggccctcggcccaggccgcccgcgacggcatcatgagcatctggaaggaggccgacttc 255
Query: 728 atcaaggtcagcgacgacgaggtggccttcctcacgcgcggggacgccaacgacgagaag 787
|||||||| |||||||| ||||||||||||||||| | || ||||||||||||||||||
Sbjct: 256 atcaaggtgagcgacgatgaggtggccttcctcacccagggcgacgccaacgacgagaag 315
Query: 788 aacgtgctgtccctgtggtttgacgggctcaagctgctcgtcgtcaccgacggggacaag 847
|||||||| ||||| ||||| || || |||||||||||| ||||||||||||| || |||
Sbjct: 316 aacgtgctctccctctggttcgagggcctcaagctgctcatcgtcaccgacggcgagaag 375
Query: 848 ggatgcaggtacttcaccaaggacttcaagggcagcgtgcccggcttcaaggtcgacacc 907
||||||||||||||||||||||||||||||||| ||||||||||| | ||| |||||
Sbjct: 376 ggatgcaggtacttcaccaaggacttcaagggctccgtgcccggctactctgtcaacacc 435
Query: 908 gtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgtcaacgtcgccaag 967
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 436 gtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgtcaatgtctccaag 495
Query: 968 gacgactccatcttccacaacgaggagaagctccgcgaggctctcaagttctc-caacgc 1026
||||||||||||||| |||| |||| ||||| | |||| || ||||||| |||||
Sbjct: 496 gacgactccatcttctacaatgaggccaagctgagggaggtgctgcagttctcgaaacgc 555
Query: 1027 ctgcggcgccatctgcaccaccaagaagggcgccatcccggcgctgcccac 1077
||||| ||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 556 ttgcggtgccatctgcaccaccaagaagggagccatcccggggctgcccac 606
>gb|CV056433.1|CV056433 BNEL17F7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL17F7 5' similar to putative
fructokinase II, mRNA sequence
Length = 603
Score = 587 bits (296), Expect = e-166
Identities = 523/599 (87%)
Strand = Plus / Plus
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 5 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 64
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 65 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 124
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 125 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 184
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 185 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 244
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 245 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 304
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|||||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 305 cgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggcg 364
Query: 593 cacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaac 652
||| | |||||||||||||| |||||| | || ||| | |||||||| ||||||||||||
Sbjct: 365 cacgtcgccgccatgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaac 424
Query: 653 gtgcgcctcccgctctggccgtcgcccgacgccgcacgcgagggcatcctcagcatctgg 712
|||||||||||||||||||| ||| || | ||||| ||||| |||||| | |||||||||
Sbjct: 425 gtgcgcctcccgctctggccctcggcccaggccgcccgcgacggcatcatgagcatctgg 484
Query: 713 aaggaggccgacttcatcaaggtcagcgacgacgaggtggccttcctcacgcgcggggac 772
||||||||||||||||||||||| |||||||| ||||||||||||||||| | || |||
Sbjct: 485 aaggaggccgacttcatcaaggtgagcgacgatgaggtggccttcctcacccagggcgac 544
Query: 773 gccaacgacgagaagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtcgt 831
||||||||||||||||||||||| ||| ||||| || || |||||||||||| ||||
Sbjct: 545 gccaacgacgagaagaacgtgctcntcctctggttcgagggcctcaagctgctcatcgt 603
>gb|BG415409.1|BG415409 HVSMEk0006G08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006G08f, mRNA sequence
Length = 649
Score = 531 bits (268), Expect = e-149
Identities = 442/500 (88%)
Strand = Plus / Plus
Query: 488 gacatgctgctgacggaggcggagctggacctgggcctggtgcggcgcgccagggtgttc 547
||||||||||| |||||||| ||||| |||||| ||| | || || ||| | | |||
Sbjct: 5 gacatgctgctcacggaggccgagctcaacctggacctcatccgccgagcccgcatcttc 64
Query: 548 cactacggctccatctcgctcatctccgagccgtgccgctcggcgcacatggccgccatg 607
|||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||||
Sbjct: 65 cactacggctccatctcgctcatcaccgagccctgccgctcggcgcacgtcgccgccatg 124
Query: 608 cgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaacgtgcgcctcccgctc 667
||||| |||||| | || ||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 125 cgcgctgccaagtcggccggcatcctctgctcgtacgaccccaacgtgcgcctcccgctc 184
Query: 668 tggccgtcgcccgacgccgcacgcgagggcatcctcagcatctggaaggaggccgacttc 727
||||| ||| || | ||||| ||||| |||||| | ||||||||||||||||||||||||
Sbjct: 185 tggccctcggcccaggccgcccgcgacggcatcatgagcatctggaaggaggccgacttc 244
Query: 728 atcaaggtcagcgacgacgaggtggccttcctcacgcgcggggacgccaacgacgagaag 787
|||||||| |||||||| ||||||||||||||||| | || ||||||||||||||||||
Sbjct: 245 atcaaggtgagcgacgatgaggtggccttcctcacccagggcgacgccaacgacgagaag 304
Query: 788 aacgtgctgtccctgtggtttgacgggctcaagctgctcgtcgtcaccgacggggacaag 847
|||||||| ||||| ||||| || || |||||||||||| ||||||||||||| || |||
Sbjct: 305 aacgtgctctccctctggttcgagggcctcaagctgctcatcgtcaccgacggcgagaag 364
Query: 848 ggatgcaggtacttcaccaaggacttcaagggcagcgtgcccggcttcaaggtcgacacc 907
||||||||||||||||||||||||||||||||| ||||||||||| | ||| |||||
Sbjct: 365 ggatgcaggtacttcaccaaggacttcaagggctccgtgcccggctactctgtcaacacc 424
Query: 908 gtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgtcaacgtcgccaag 967
||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||
Sbjct: 425 gtcgacaccaccggcgccggcgacgccttcgtcggctccttcctcgtcaatgtctccaag 484
Query: 968 gacgactccatcttccacaa 987
||||||||||||||| ||||
Sbjct: 485 gacgactccatcttctacaa 504
>gb|BI959942.1|BI959942 HVSMEn0022H23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022H23f, mRNA sequence
Length = 654
Score = 531 bits (268), Expect = e-149
Identities = 442/500 (88%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 140 ttcggcgagatgctgatcgacttcgtccccgacgtggccggggtgtcgctcgccgagtcc 199
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 200 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 259
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 260 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 319
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 320 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 379
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 380 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 439
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 440 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 499
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|| ||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 500 cgagcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggcg 559
Query: 593 cacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaac 652
||| | |||||||||||||| |||||| | || ||| | |||||||| ||||||||||||
Sbjct: 560 cacgtcgccgccatgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaac 619
Query: 653 gtgcgcctcccgctctggcc 672
||||||||||||||||||||
Sbjct: 620 gtgcgcctcccgctctggcc 639
>gb|BU995453.1|BU995453 HM10E21r HM Hordeum vulgare subsp. vulgare cDNA clone HM10E21
5-PRIME, mRNA sequence
Length = 650
Score = 523 bits (264), Expect = e-147
Identities = 441/500 (88%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 149 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 208
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 209 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 268
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 269 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 328
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 329 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 388
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 389 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 448
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 449 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 508
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|||||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 509 cgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggcg 568
Query: 593 cacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaac 652
||| | |||||||||||||| |||||| | || ||| | |||||||| ||||||||||||
Sbjct: 569 cacgtcgccgccatgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaac 628
Query: 653 gtgcgcctcccgctctggcc 672
||||||||||||||||||||
Sbjct: 629 gtgcgcctcccgctctggcc 648
>gb|BU981623.1|BU981623 HA24C13r HA Hordeum vulgare subsp. vulgare cDNA clone HA24C13
5-PRIME, mRNA sequence
Length = 522
Score = 517 bits (261), Expect = e-145
Identities = 450/513 (87%)
Strand = Plus / Plus
Query: 232 gggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaa 291
|||||||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||
Sbjct: 9 gggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaa 68
Query: 292 gctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgtt 351
||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| |
Sbjct: 69 gctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgct 128
Query: 352 ggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgc 411
|||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| |||||||
Sbjct: 129 ggtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgc 188
Query: 412 gcggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttcta 471
||| ||||| ||||||||||| ||||||||| | |||| ||||||||||||||||||||
Sbjct: 189 gcgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttcta 248
Query: 472 caggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcg 531
| | |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 249 ccgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccg 308
Query: 532 gcgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggc 591
|||||| | | ||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 309 ccgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggc 368
Query: 592 gcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaa 651
|||| | |||||||||||||| |||||| | || ||| | |||||||| |||||||||||
Sbjct: 369 gcacgtcgccgccatgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaa 428
Query: 652 cgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgagggcatcctcagcatctg 711
||||||||||||||||||||| ||| || | ||||| ||||| |||||| | ||||||||
Sbjct: 429 cgtgcgcctcccgctctggccctcggcccaggccgcccgcgacggcatcatgagcatctg 488
Query: 712 gaaggaggccgacttcatcaaggtcagcgacga 744
|||||||||||||||||||||||| ||||||||
Sbjct: 489 gaaggaggccgacttcatcaaggtgagcgacga 521
>gb|BI959226.1|BI959226 HVSMEn0018L24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018L24f, mRNA sequence
Length = 646
Score = 515 bits (260), Expect = e-144
Identities = 440/500 (88%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 141 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 200
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 201 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 260
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 261 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 320
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 321 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 380
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 381 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 440
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 441 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 500
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|| ||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 501 cgagcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggcg 560
Query: 593 cacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaac 652
||| | |||||||||||||| |||||| | || ||| | |||||||| ||||||||||||
Sbjct: 561 cacgtcgccgccatgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaac 620
Query: 653 gtgcgcctcccgctctggcc 672
||||||||||||||||||||
Sbjct: 621 gtgcgcctcccgctctggcc 640
>gb|BU994746.1|BU994746 HM08B05r HM Hordeum vulgare subsp. vulgare cDNA clone HM08B05
5-PRIME, mRNA sequence
Length = 655
Score = 513 bits (259), Expect = e-144
Identities = 436/495 (88%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 161 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 220
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 221 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 280
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 281 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 340
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 341 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 400
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 401 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 460
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 461 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 520
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|||||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 521 cgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggcg 580
Query: 593 cacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaac 652
||| | |||||||||||||| |||||| | || ||| | |||||||| ||||||||||||
Sbjct: 581 cacgtcgccgccatgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaac 640
Query: 653 gtgcgcctcccgctc 667
|||||||||||||||
Sbjct: 641 gtgcgcctcccgctc 655
>gb|BI960113.1|BI960113 HVSMEn0023E13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023E13f, mRNA sequence
Length = 651
Score = 509 bits (257), Expect = e-143
Identities = 439/500 (87%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 140 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 199
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 200 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 259
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 260 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 319
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 320 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 379
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 380 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 439
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 440 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 499
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|| ||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 500 cgagcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggcg 559
Query: 593 cacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaac 652
||| | |||||||||||||| |||||| | || ||| | |||||||| ||||||||||||
Sbjct: 560 cacgtcgccgccatgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaac 619
Query: 653 gtgcgcctcccgctctggcc 672
|||||||| |||||||||||
Sbjct: 620 gtgcgcctnccgctctggcc 639
>gb|BU980246.1|BU980246 HA20B22r HA Hordeum vulgare subsp. vulgare cDNA clone HA20B22
5-PRIME, mRNA sequence
Length = 486
Score = 507 bits (256), Expect = e-142
Identities = 418/472 (88%)
Strand = Plus / Plus
Query: 585 gctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacg 644
||||||||||| | |||||||||||||| |||||| | || ||| | |||||||| ||||
Sbjct: 11 gctcggcgcacgtcgccgccatgcgcgctgccaagtcggccggcatcctctgctcgtacg 70
Query: 645 accccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgagggcatcctca 704
|||||||||||||||||||||||||||| ||| || | ||||| ||||| |||||| | |
Sbjct: 71 accccaacgtgcgcctcccgctctggccctcggcccaggccgcccgcgacggcatcatga 130
Query: 705 gcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggccttcctcacgc 764
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 131 gcatctggaaggaggccgacttcatcaaggtgagcgacgatgaggtggccttcctcaccc 190
Query: 765 gcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacgggctcaagctgc 824
|| |||||||||||||||||||||||||| ||||| ||||| || || ||||||||||
Sbjct: 191 agggcgacgccaacgacgagaagaacgtgctctccctctggttcgagggcctcaagctgc 250
Query: 825 tcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttcaagggcagcg 884
|| ||||||||||||| || |||||||||||||||||||||||||||||||||||| ||
Sbjct: 251 tcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaagggctccg 310
Query: 885 tgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgccttcgtcggct 944
||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgcccggctactctgtcaacaccgtcgacaccaccggcgccggcgacgccttcgtcggct 370
Query: 945 ccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaagctccgcg 1004
||||||||||||| ||| |||||||||||||||||||| |||| |||| ||||| | |
Sbjct: 371 ccctcctcgtcaatgtctccaaggacgactccatcttctacaatgaggccaagctgaggg 430
Query: 1005 aggctctcaagttctccaacgcctgcggcgccatctgcaccaccaagaaggg 1056
||| || ||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 431 aggtgctgcagttctcgaacgcttgcggtgccatctgcaccaccaagaaggg 482
>gb|BF254147.3|BF254147 HVSMEf0003C12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0003C12f, mRNA sequence
Length = 812
Score = 496 bits (250), Expect = e-138
Identities = 397/446 (89%)
Strand = Plus / Plus
Query: 632 ctctgctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgc 691
|||||||| |||||||||||||||||||||||||||||||| ||| || | ||||| |||
Sbjct: 22 ctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggcccaggccgcccgc 81
Query: 692 gagggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtg 751
|| |||||| | |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 82 gacggcatcatgagcatctggaaggaggccgacttcatcaaggtgagcgacgatgaggtg 141
Query: 752 gccttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgac 811
||||||||||| | || |||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 142 gccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccctctggttcgag 201
Query: 812 gggctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggac 871
|| |||||||||||| ||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 202 ggcctcaagctgctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggac 261
Query: 872 ttcaagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgac 931
||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 262 ttcaagggctccgtgcccggctactctgtcaacaccgtcgacaccaccggcgccggcgac 321
Query: 932 gccttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgag 991
|||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||
Sbjct: 322 gccttcgtcggctccctcctcgtcaatgtctccaaggacgactccatcttctacaatgag 381
Query: 992 gagaagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcaccaccaag 1051
| ||||| | |||| || || |||| ||||| || || ||||||||||||||||||
Sbjct: 382 gccaagctgagggaggtgctgcagatctcgaacgcttgtggtgccatctgcaccaccaag 441
Query: 1052 aagggcgccatcccggcgctgcccac 1077
||||| ||||||||||||||||||||
Sbjct: 442 aagggagccatcccggcgctgcccac 467
>gb|BI776320.2|BI776320 EBem04_SQ001_J09_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_J09 5', mRNA sequence
Length = 625
Score = 496 bits (250), Expect = e-138
Identities = 427/486 (87%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 140 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 199
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 200 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 259
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 260 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 319
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 320 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 379
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 380 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 439
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 440 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 499
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|||||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 500 cgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggcg 559
Query: 593 cacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaac 652
||| | |||||||||||||| |||||| | || ||| | |||||||| ||||||||||||
Sbjct: 560 cacgtcgccgccatgcgcgctgccaagtcggccggcatcctctgctcgtacgaccccaac 619
Query: 653 gtgcgc 658
||||||
Sbjct: 620 gtgcgc 625
>gb|BM370819.2|BM370819 EBro04_SQ002_G06_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_G06 5', mRNA sequence
Length = 538
Score = 496 bits (250), Expect = e-138
Identities = 466/538 (86%)
Strand = Plus / Plus
Query: 331 cgacgagttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggg 390
|||||||||||| |||||| ||||| | ||||||||||||||| ||| ||| | |||||
Sbjct: 1 cgacgagttcggccacatgctggtggagatcctgaagcagaacggcgtcaacgccgaggg 60
Query: 391 gtgcctgttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacgg 450
|||||||||||| |||||||||| ||||| ||||||||||| ||||||||| | ||||
Sbjct: 61 ctgcctgttcgaccagcacgcgcgcacggccctggccttcgtcacgctcaaggccaacgg 120
Query: 451 ggagcgcgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcgga 510
||||||||||||||||||||| | |||||| || ||||||||||| |||||||| ||
Sbjct: 121 cgagcgcgagttcatgttctaccgcaacccgtcggccgacatgctgctcacggaggccga 180
Query: 511 gctggacctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcat 570
||| |||||| ||| | || |||||| | | ||||||||||||||||||||||||||
Sbjct: 181 gctcaacctggacctcatccgccgcgcccgcatcttccactacggctccatctcgctcat 240
Query: 571 ctccgagccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgt 630
| ||||||| ||||||||||||||| | |||||||||||||| |||||| | || ||| |
Sbjct: 241 caccgagccctgccgctcggcgcacgtcgccgccatgcgcgctgccaagtcggccggcat 300
Query: 631 gctctgctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacg 690
|||||||| |||||||||||||||||||||||||||||||| ||| || | ||||| ||
Sbjct: 301 cctctgctcgtacgaccccaacgtgcgcctcccgctctggccctcggcccaggccgcccg 360
Query: 691 cgagggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggt 750
||| |||||| | |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 361 cgacggcatcatgagcatctggaaggaggccgacttcatcaaggtgagcgacgatgaggt 420
Query: 751 ggccttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttga 810
|||||||||||| | || |||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 421 ggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccctctggttcga 480
Query: 811 cgggctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaag 868
|| |||||||||||| ||||||||||| | || |||||||||| |||||||||||||
Sbjct: 481 gggcctcaagctgctcatcgtcaccgaccgcgagaagggatgcatgtacttcaccaag 538
>gb|BF267991.2|BF267991 HV_CEa0019I11f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0019I11f, mRNA sequence
Length = 803
Score = 472 bits (238), Expect = e-131
Identities = 430/493 (87%), Gaps = 1/493 (0%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 149 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 208
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 209 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 268
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 269 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 328
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| || ||||||||| ||||||||
Sbjct: 329 gtggagatcctgaagcagaacggcgtcaacgccgagggctgtctgttcgaccagcacgcg 388
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| |||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 389 cgcacgggcctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 448
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| | || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 449 cgaaacccgtgggccgacatgctgctcacggaggccgagctcaacctggacctcatccgt 508
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|| ||| | | ||||||||||||||||||||||||||| ||||||| ||||| |||| |
Sbjct: 509 cgagcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgttcggng 568
Query: 593 cacatggccgccatgcgcgcagccaaggccgcg-ggcgtgctctgctcctacgaccccaa 651
||| | |||| ||||||||| |||||| ||| | ||||| |||||||||||||| |||||
Sbjct: 569 cacgttgccgtcatgcgcgctgccaagtccgggcggcgtcctctgctcctacgaacccaa 628
Query: 652 cgtgcgcctcccg 664
|||||||||||||
Sbjct: 629 cgtgcgcctcccg 641
>gb|AL507171.1|AL507171 AL507171 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05O10T 5',
mRNA sequence
Length = 545
Score = 464 bits (234), Expect = e-129
Identities = 393/446 (88%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 100 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 159
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 160 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 219
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 220 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 279
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 280 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 339
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 340 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 399
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 400 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 459
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|||||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 460 cgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggcg 519
Query: 593 cacatggccgccatgcgcgcagccaa 618
||| | |||||||||||||| |||||
Sbjct: 520 cacgtcgccgccatgcgcgctgccaa 545
>gb|BQ766977.1|BQ766977 EBro08_SQ007_K16_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_K16 5', mRNA sequence
Length = 587
Score = 460 bits (232), Expect = e-128
Identities = 388/440 (88%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 148 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 207
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 208 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 267
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 268 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 327
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 328 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 387
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 388 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 447
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 448 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 507
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|||||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 508 cgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggcg 567
Query: 593 cacatggccgccatgcgcgc 612
||| | ||||||||||||||
Sbjct: 568 cacgtcgccgccatgcgcgc 587
>gb|CA007382.1|CA007382 HU07M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU07M08
5-PRIME, mRNA sequence
Length = 544
Score = 460 bits (232), Expect = e-128
Identities = 373/420 (88%)
Strand = Plus / Plus
Query: 683 gccgcacgcgagggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcgac 742
||||| ||||| |||||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 22 gccgcccgcgacggcatcatgagcatctggaaggaggccgacttcatcaaggtgagcgac 81
Query: 743 gacgaggtggccttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctg 802
|| ||||||||||||||||| | || |||||||||||||||||||||||||| |||||
Sbjct: 82 gatgaggtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccctc 141
Query: 803 tggtttgacgggctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttc 862
||||| || || |||||||||||| ||||||||||||| || ||||||||||||||||||
Sbjct: 142 tggttcgagggcctcaagctgctcatcgtcaccgacggcgagaagggatgcaggtacttc 201
Query: 863 accaaggacttcaagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggc 922
|||||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||
Sbjct: 202 accaaggacttcaagggctccgtgcccggctactctgtcaacaccgtcgacaccaccggc 261
Query: 923 gccggcgacgccttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttc 982
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 262 gccggcgacgccttcgtcggctccctcctcgtcaatgtctccaaggacgactccatcttc 321
Query: 983 cacaacgaggagaagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgc 1042
|||| |||| ||||| | |||| || ||||||| ||||| ||||| |||||||||
Sbjct: 322 tacaatgaggccaagctgagggaggtgctgcagttctcgaacgcttgcggtgccatctgc 381
Query: 1043 accaccaagaagggcgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||||||||| |||||||||||||||||||| ||||||||||| ||| ||||||
Sbjct: 382 accaccaagaagggagccatcccggcgctgcccaccaccgccaccgccctggagctcatc 441
>gb|BF255121.2|BF255121 HVSMEf0006A05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006A05f, mRNA sequence
Length = 599
Score = 458 bits (231), Expect = e-127
Identities = 470/547 (85%), Gaps = 2/547 (0%)
Strand = Plus / Plus
Query: 176 ggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcgggc 235
|||||||||||||||||||||||||||||||||||||| | ||||| |||||||| |||
Sbjct: 47 ggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtccggc 106
Query: 236 ggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaagctc 295
|||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||
Sbjct: 107 ggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaagctc 166
Query: 296 ggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttggtg 355
||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| |||||
Sbjct: 167 ggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctggtg 226
Query: 356 aacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcgcgg 415
| ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||||
Sbjct: 227 gagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcgcgc 286
Query: 416 acggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctacagg 475
||||| ||||||||||| ||||||||| | |||| ||||||||||||||||||||| |
Sbjct: 287 acggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctaccgc 346
Query: 476 aacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcggcgc 535
|||||| || ||||||||||| |||||||| ||||| |||||| ||| | || ||
Sbjct: 347 aacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgccga 406
Query: 536 gccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcgcac 595
||| | | || |||||||| ||||||||||||| ||||||| |||||||||||||||
Sbjct: 407 gcccgcatctt-cactacgggctcatctcgctcatcaccgagccctgccgctcggcgcac 465
Query: 596 atggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaacgtg 655
| |||| ||||||||| |||||| | || ||| | |||||||| ||||| |||||||||
Sbjct: 466 gtcgccggcatgcgcgctgccaagtcggccggcatcctctgctcgtacga-cccaacgtg 524
Query: 656 cgcctcccgctctggccgtcgcccgacgccgcacgcgagggcatcctcagcatctggaag 715
||||||||||||||||| ||| || | |||| ||||| ||| || | ||||||||| ||
Sbjct: 525 cgcctcccgctctggccctcggcccaggccggccgcgacggcgtcatgagcatctggtag 584
Query: 716 gaggccg 722
|||||||
Sbjct: 585 gaggccg 591
>gb|CB880871.1|CB880871 HM08B05w HM Hordeum vulgare subsp. vulgare cDNA clone HM08B05
3-PRIME, mRNA sequence
Length = 584
Score = 456 bits (230), Expect = e-126
Identities = 368/414 (88%)
Strand = Plus / Minus
Query: 689 cgcgagggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgag 748
||||| |||||| | |||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 581 cgcgacggcatcatgagcatctggaaggaggccgacttcatcaaggtgagcgacgatgag 522
Query: 749 gtggccttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggttt 808
|||||||||||||| | || |||||||||||||||||||||||||| ||||| |||||
Sbjct: 521 gtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccctctggttc 462
Query: 809 gacgggctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaag 868
|| || |||||||||||| ||||||||||||| || ||||||||||||||||||||||||
Sbjct: 461 gagggcctcaagctgctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaag 402
Query: 869 gacttcaagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggc 928
|||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 401 gacttcaagggctccgtgcccggctactctgtcaacaccgtcgacaccaccggcgccggc 342
Query: 929 gacgccttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaac 988
||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||
Sbjct: 341 gacgccttcgtcggctccctcctcgtcaatgtctccaaggacgactccatcttctacaat 282
Query: 989 gaggagaagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcaccacc 1048
|||| ||||| | |||| || ||||||| ||||| ||||| |||||||||||||||
Sbjct: 281 gaggccaagctgagggaggtgctgcagttctcgaacgcttgcggtgccatctgcaccacc 222
Query: 1049 aagaagggcgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||| |||||||||||||||||||| ||||||||||| ||| ||||||
Sbjct: 221 aagaagggagccatcccggcgctgcccaccaccgccaccgccctggagctcatc 168
>gb|BG343619.2|BG343619 HVSMEg0006A18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006A18f, mRNA sequence
Length = 734
Score = 448 bits (226), Expect = e-124
Identities = 367/414 (88%)
Strand = Plus / Plus
Query: 689 cgcgagggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgag 748
||||| |||||| | |||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 5 cgcgacggcatcatgagcatctggaaggaggccgacttcatcaaggtgagcgacgatgag 64
Query: 749 gtggccttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggttt 808
|||||||||||||| | || |||||||||||||||||||||||||| ||||| |||||
Sbjct: 65 gtggccttcctcacccagggcgacgccaacgacgagaagaacgtgctctccctctggttc 124
Query: 809 gacgggctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaag 868
|| || |||||||||||| ||||||||||||| || ||||||||||||||||||||||||
Sbjct: 125 gagggcctcaagctgctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaag 184
Query: 869 gacttcaagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggc 928
|||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 185 gacttcaagggctccgtgcccggctactctgtcaacaccgtcgacaccaccggcgccggc 244
Query: 929 gacgccttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaac 988
||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||
Sbjct: 245 gacgccttcgtcggctccctcctcgtcaatgtctccaaggacgactccatcttctacaat 304
Query: 989 gaggagaagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcaccacc 1048
|||| ||||| | |||| || ||||||| ||||| || || |||||||||||||||
Sbjct: 305 gaggccaagctgagggaggtgctgcagttctcgaacgcttgtggtgccatctgcaccacc 364
Query: 1049 aagaagggcgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||| |||||||||||||||||||| ||||||||||| ||| ||||||
Sbjct: 365 aagaagggagccatcccggcgctgcccaccaccgccaccgccctggagctcatc 418
>gb|BF619342.2|BF619342 HVSMEc0016I11f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016I11f, mRNA sequence
Length = 821
Score = 444 bits (224), Expect = e-123
Identities = 428/496 (86%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 149 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 208
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 209 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 268
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 269 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggtcacatgctg 328
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| || ||||||||| ||||||||
Sbjct: 329 gtggagatcctgaagcagaacggcgtcaacgccgagggctgtctgttcgaccagcacgcg 388
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| ||||||||||| |||||||||
Sbjct: 389 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagtttatgttctac 448
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | |||
Sbjct: 449 cgcaacccgtcggccgacatgctgctcacggaggccgagcttaacctggaccttatacgg 508
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|| ||| | | ||||||||||| ||||| | ||||||| ||||||| ||||||||||||
Sbjct: 509 cgagcccgcattttccactacggatccattttgctcatcaccgagccctgccgctcggcg 568
Query: 593 cacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaac 652
||| |||||||||||||||| | |||| | | || | || ||||| | ||||||||||
Sbjct: 569 cacgtggccgccatgcgcgctgtcaagtcgggcggtatcctttgctcgttcgaccccaac 628
Query: 653 gtgcgcctcccgctct 668
||||||||||||||||
Sbjct: 629 gtgcgcctcccgctct 644
>gb|BQ468435.1|BQ468435 HM01D23T HM Hordeum vulgare subsp. vulgare cDNA clone HM01D23
5-PRIME, mRNA sequence
Length = 598
Score = 444 bits (224), Expect = e-123
Identities = 386/440 (87%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 158 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 217
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 218 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 277
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 278 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 337
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 338 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 397
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| |||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 398 cgcacggtcctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 457
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 458 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 517
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|||||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 518 cgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcggcg 577
Query: 593 cacatggccgccatgcgcgc 612
||| | |||| |||||||||
Sbjct: 578 cacgtcgccggcatgcgcgc 597
>gb|BI960452.1|BI960452 HVSMEn0024K09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024K09f, mRNA sequence
Length = 631
Score = 436 bits (220), Expect = e-120
Identities = 385/440 (87%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 153 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 212
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 213 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 272
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 273 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 332
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 333 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 392
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 393 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 452
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 453 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 512
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|| ||| | | ||||||||||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 513 cgagcccgcatcttccactacggctccatctcgctcatcaccgagtcctgccgctcggcg 572
Query: 593 cacatggccgccatgcgcgc 612
||| | | ||||||||||||
Sbjct: 573 cacgtcggcgccatgcgcgc 592
>gb|BU995659.1|BU995659 HM10P06r HM Hordeum vulgare subsp. vulgare cDNA clone HM10P06
5-PRIME, mRNA sequence
Length = 653
Score = 436 bits (220), Expect = e-120
Identities = 430/500 (86%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||| |||||| ||||||||||||| || |||||||||| | ||||| ||||||||
Sbjct: 132 ttcggtgagatgttgatcgacttcgttccaaacgtggccggcgtctcgctcgccgagtct 191
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
|| ||||||||||| || ||||| |||||||||||||| ||||| ||||| ||| |||||
Sbjct: 192 ggaggcttcgtcaaagcgcccggaggcgcgcccgccaatgtcgcttgcgctatctccaag 251
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 252 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 311
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| ||||||||||||||| | ||||||| ||||||| ||||| |||||| ||||||||
Sbjct: 312 gtggacatcctgaagcagagcggcgtgaacgcggagggctgcctcttcgaccagcacgcg 371
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| || || ||||||||||| || |||||| | |||| |||||||||||||||||||||
Sbjct: 372 cgcaccgccctggccttcgtcaccctcaagtccaacggcgagcgcgagttcatgttctac 431
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| ||| |||||||| || |||||||| ||||| |||| | ||| | ||
Sbjct: 432 cgcaacccgtccgccgacatgctcctcacggaggccgagctcaacctcgacctcatccgc 491
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|||||| | | ||||||||||||||||||||||||||| ||||||| |||||||| ||
Sbjct: 492 cgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctccgcc 551
Query: 593 cacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaac 652
||| | |||||||||||||| |||||| |||| ||| | |||||||||||||||||||||
Sbjct: 552 cacgtcgccgccatgcgcgccgccaagtccgccggcatcctctgctcctacgaccccaac 611
Query: 653 gtgcgcctcccgctctggcc 672
||||||||||||||||||||
Sbjct: 612 gtgcgcctcccgctctggcc 631
>gb|AL507576.1|AL507576 AL507576 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06D17V 5',
mRNA sequence
Length = 700
Score = 426 bits (215), Expect = e-118
Identities = 361/409 (88%), Gaps = 1/409 (0%)
Strand = Plus / Minus
Query: 695 ggcatcctcagcatctgg-aaggaggccgacttcatcaaggtcagcgacgacgaggtggc 753
|||||| | ||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 675 ggcatcatgagcatctgggaaggaggccgacttcatcaaggtgagcgacgatgaggtggc 616
Query: 754 cttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacgg 813
||||||||| | || |||||||||||||| ||||||||||| ||||| ||||| || ||
Sbjct: 615 cttcctcacccagggcgacgccaacgacganaagaacgtgctctccctctggttcgaggg 556
Query: 814 gctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggactt 873
|||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 555 cctcaagctgctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggactt 496
Query: 874 caagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgc 933
||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||
Sbjct: 495 caagggctccgtgcccggctactctgtcaacaccgtcgacaccaccggcgccggcgacgc 436
Query: 934 cttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgagga 993
|||||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||
Sbjct: 435 cttcgtcggctccctcctcgtcaatgtctccaaggacgactccatcttntacaatgaggc 376
Query: 994 gaagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcaccaccaagaa 1053
||||| | |||| || ||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 375 caagctgagggaggtgctgcagttctcgaacgcttgcggtgccatctgcaccaccaagaa 316
Query: 1054 gggcgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
||| |||||||||||||||||||| ||||||||||| ||| ||||||
Sbjct: 315 gggagccatcccggcgctgcccaccaccgccaccgccctggagctcatc 267
>gb|BU996404.1|BU996404 HM13H22r HM Hordeum vulgare subsp. vulgare cDNA clone HM13H22
5-PRIME, mRNA sequence
Length = 625
Score = 426 bits (215), Expect = e-118
Identities = 425/495 (85%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||| |||||| ||||||||||||| || |||||||||| | ||||| ||||||||
Sbjct: 131 ttcggtgagatgttgatcgacttcgttccaaacgtggccggcgtctcgctcgccgagtct 190
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
|| ||||||||||| || ||||| |||||||||||||| ||||| ||||| ||| |||||
Sbjct: 191 ggaggcttcgtcaaagcgcccggaggcgcgcccgccaatgtcgcttgcgctatctccaag 250
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 251 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 310
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| ||||||||||||||| | ||||||| ||||||| ||||| |||||| ||||||||
Sbjct: 311 gtggacatcctgaagcagagcggcgtgaacgcggagggctgcctcttcgaccagcacgcg 370
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| || || ||||||||||| || |||||| | |||| |||||||||||||||||||||
Sbjct: 371 cgcaccgccctggccttcgtcaccctcaagtccaacggcgagcgcgagttcatgttctac 430
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| ||| |||||||| || |||||||| ||||| |||| | ||| | ||
Sbjct: 431 cgcaacccgtccgccgacatgctcctcacggaggccgagctcaacctcgacctcatccgc 490
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|||||| | | ||||||||||||||||||||||||||| ||||||| |||||||| ||
Sbjct: 491 cgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctccgcc 550
Query: 593 cacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaac 652
||| | |||||||||||||| |||||| |||| ||| | |||||||||||||||||||||
Sbjct: 551 cacgtcgccgccatgcgcgccgccaagtccgccggcatcctctgctcctacgaccccaac 610
Query: 653 gtgcgcctcccgctc 667
|||||||||||||||
Sbjct: 611 gtgcgcctcccgctc 625
>gb|CA019577.1|CA019577 HV12G23r HV Hordeum vulgare subsp. vulgare cDNA clone HV12G23
5-PRIME, mRNA sequence
Length = 542
Score = 422 bits (213), Expect = e-116
Identities = 342/385 (88%)
Strand = Plus / Plus
Query: 718 ggccgacttcatcaaggtcagcgacgacgaggtggccttcctcacgcgcggggacgccaa 777
|||||||||||||||||| |||||||| ||||||||||||||||| | || ||||||||
Sbjct: 10 ggccgacttcatcaaggtgagcgacgatgaggtggccttcctcacccagggcgacgccaa 69
Query: 778 cgacgagaagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtcgtcaccga 837
|||||||||||||||||| ||||| ||||| || || |||||||||||| ||||||||||
Sbjct: 70 cgacgagaagaacgtgctctccctctggttcgagggcctcaagctgctcatcgtcaccga 129
Query: 838 cggggacaagggatgcaggtacttcaccaaggacttcaagggcagcgtgcccggcttcaa 897
||| || |||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 130 cggcgagaagggatgcaggtacttcaccaaggacttcaagggctccgtgcccggctactc 189
Query: 898 ggtcgacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgtcaa 957
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tgtcaacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgtcaa 249
Query: 958 cgtcgccaaggacgactccatcttccacaacgaggagaagctccgcgaggctctcaagtt 1017
||| |||||||||||||||||||| |||| |||| ||||| | |||| || ||||
Sbjct: 250 tgtctccaaggacgactccatcttctacaatgaggccaagctgagggaggtgctgcagtt 309
Query: 1018 ctccaacgcctgcggcgccatctgcaccaccaagaagggcgccatcccggcgctgcccac 1077
||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 310 ctcgaacgcttgcggtgccatctgcaccaccaagaagggagccatcccggcgctgcccac 369
Query: 1078 ggtcgccaccgcccaggacctcatc 1102
||||||||||| ||| ||||||
Sbjct: 370 caccgccaccgccctggagctcatc 394
>gb|BQ469455.1|BQ469455 HM04M12r HM Hordeum vulgare subsp. vulgare cDNA clone HM04M12
5-PRIME, mRNA sequence
Length = 620
Score = 420 bits (212), Expect = e-116
Identities = 425/496 (85%)
Strand = Plus / Plus
Query: 167 gtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggcc 226
||||| ||||| ||||||||||||||||| || || ||||||||||| | || || |||
Sbjct: 125 gtgtccttcggtgagatgctgatcgactttgtgccggacgtggccggcgtctccctcgcc 184
Query: 227 gagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatc 286
||||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 185 gagtccggaggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcatgcgccatc 244
Query: 287 gccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcac 346
| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tctaagcttggcggctcgtccgccttcgtcggcaagttcggcgacgacgagttcgggcac 304
Query: 347 atgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaag 406
||| ||||| ||||||||||||||||| ||||||| | ||||| ||||| |||||| ||
Sbjct: 305 atgctggtggacatcctgaagcagaacggcgtgaacgccgagggctgcctcttcgaccag 364
Query: 407 cacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatg 466
|||||||| || |||||||||||||| || |||||| | |||| ||||| |||||||||
Sbjct: 365 cacgcgcgcaccgcgctggccttcgtcacactcaagaccaacggcgagcgtgagttcatg 424
Query: 467 ttctacaggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctg 526
|||||| | |||||| ||| |||||||| || |||||||||||||| |||| | |||
Sbjct: 425 ttctaccgcaacccgtccgccgacatgctcctcacggaggcggagctcaacctcgacctc 484
Query: 527 gtgcggcgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgc 586
| || || ||| | | ||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 485 atccgccgtgcccgcatcttccactacggctccatctcgctcatcaccgagccatgccgc 544
Query: 587 tcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgac 646
|| || ||| | ||||||||||| || |||||| | || ||| | |||||||||||||||
Sbjct: 545 tccgcccacgtcgccgccatgcgtgccgccaagtctgccggcatcctctgctcctacgac 604
Query: 647 cccaacgtgcgcctcc 662
||||||||||||||||
Sbjct: 605 cccaacgtgcgcctcc 620
>gb|BQ660955.1|BQ660955 HM01D23w HM Hordeum vulgare subsp. vulgare cDNA clone HM01D23
3-PRIME, mRNA sequence
Length = 637
Score = 416 bits (210), Expect = e-115
Identities = 346/390 (88%), Gaps = 1/390 (0%)
Strand = Plus / Minus
Query: 714 aggaggccgacttcatcaaggtcagcgacgacgaggtggccttcc-tcacgcgcggggac 772
|||||||||||||||||||||| |||||||| ||||||||||||| |||| | || |||
Sbjct: 637 aggaggccgacttcatcaaggtgagcgacgatgaggtggccttccctcacccagggcgac 578
Query: 773 gccaacgacgagaagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtcgtc 832
||||||||||||||||||||||| ||||| ||||| || || |||||||||||| |||||
Sbjct: 577 gccaacgacgagaagaacgtgctctccctctggttcgagggcctcaagctgctcatcgtc 518
Query: 833 accgacggggacaagggatgcaggtacttcaccaaggacttcaagggcagcgtgcccggc 892
|||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 517 accgacggcgagaagggatgcaggtacttcaccaaggacttcaagggctccgtgcccggc 458
Query: 893 ttcaaggtcgacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcctc 952
| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tactctgtcaacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcctc 398
Query: 953 gtcaacgtcgccaaggacgactccatcttccacaacgaggagaagctccgcgaggctctc 1012
||||| ||| |||||||||||||||||||| |||| |||| ||||| | |||| ||
Sbjct: 397 gtcaatgtctccaaggacgactccatcttctacaatgaggccaagctgagggaggtgctg 338
Query: 1013 aagttctccaacgcctgcggcgccatctgcaccaccaagaagggcgccatcccggcgctg 1072
||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 337 cagttctcgaacgcttgcggtgccatctgcaccaccaagaagggagccatcccggcgctg 278
Query: 1073 cccacggtcgccaccgcccaggacctcatc 1102
||||| ||||||||||| ||| ||||||
Sbjct: 277 cccaccaccgccaccgccctggagctcatc 248
>gb|CV060879.1|CV060879 BNEL62c7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL62c7 5' similar to putative
fructokinase II, mRNA sequence
Length = 560
Score = 406 bits (205), Expect = e-112
Identities = 361/413 (87%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 147 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 206
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 207 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 266
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 267 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 326
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| || |||||
Sbjct: 327 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagtacgcg 386
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| |||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 387 cgcacggtcctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 446
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 447 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 506
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccg 585
|||||| | | ||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 507 cgcgcccgcatcttccactacggctccatctcgctcatcaccgagccctgccg 559
>gb|BF263628.2|BF263628 HV_CEa0007D23f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007D23f, mRNA sequence
Length = 591
Score = 398 bits (201), Expect = e-109
Identities = 374/432 (86%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 159 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 218
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 219 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 278
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 279 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 338
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 339 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 398
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| |||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 399 cgcacgggcctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 458
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 459 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatccgc 518
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|| ||| | | || |||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 519 cgagcccgcatcttncactacggctccatctcggctatcaccgagccctgccgctcggcg 578
Query: 593 cacatggccgcc 604
||| | ||||||
Sbjct: 579 cacgtcgccgcc 590
>gb|BI953414.1|BI953414 HVSMEm0012J13f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0012J13f, mRNA sequence
Length = 848
Score = 392 bits (198), Expect = e-107
Identities = 354/406 (87%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
|||||||||||||||| ||| |||||||||||||||||||| | ||||| ||||||||
Sbjct: 149 ttcggcgagatgctgagcgagttcgtccccgacgtggccggcgtctcgctcgccgagtcc 208
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 209 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 268
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 269 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 328
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 329 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 388
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| |||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 389 cgcacgggcctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 448
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| |||||
Sbjct: 449 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggacctcatgcgg 508
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagc 578
|| ||| | |||| |||||||| ||||||||||||||| ||||||
Sbjct: 509 cgagcccgcatgttgcactacgggtccatctcgctcatcaccgagc 554
>gb|BI959274.1|BI959274 HVSMEn0019A10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019A10f, mRNA sequence
Length = 666
Score = 383 bits (193), Expect = e-104
Identities = 429/503 (85%), Gaps = 4/503 (0%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 62 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 121
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || || ||
Sbjct: 122 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccgag 181
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcgg-cgacgacgagt-tcgggcacatgt 350
|||||||| ||||||||||||||||| | | || ||||||||| | ||| ||||||
Sbjct: 182 ctcggcggctcctccgccttcgtcggaatggggggncgacgacgattcncggccacatgc 241
Query: 351 tggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacg 410
||||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||
Sbjct: 242 tggtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacg 301
Query: 411 cgcggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttct 470
|||| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||
Sbjct: 302 cgcgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttct 361
Query: 471 acaggaacccgagcgcggacatgctgctgacggagg-cggagctggacctgggcctggtg 529
|| | |||||| || ||||||||||| ||||||| || |||| |||||| ||| |
Sbjct: 362 accgcaacccgtcggccgacatgctgctcacggaggccgnagct-cacctggacctcatc 420
Query: 530 cggcgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcg 589
|| || ||| | | ||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 421 cgccgagcccgcatcttccactacggctccatctcgctcatcaccgagccctgccgctcg 480
Query: 590 gcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgacccc 649
|||||| | |||| ||||||||| |||||| | || ||| | || ||||| |||||||||
Sbjct: 481 gcgcacgtcgccggcatgcgcgctgccaagtcggccggcatcctttgctcgtacgacccc 540
Query: 650 aacgtgcgcctcccgctctggcc 672
|||||||||||||| |||||||
Sbjct: 541 cacgtgcgcctcccggtctggcc 563
>gb|BQ768499.1|BQ768499 EBro08_SQ011_K21_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_K21 5', mRNA sequence
Length = 520
Score = 383 bits (193), Expect = e-104
Identities = 304/341 (89%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 148 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 207
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 208 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 267
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 268 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 327
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 328 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 387
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 388 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 447
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagct 513
| |||||| || ||||||||||| |||||||| |||||
Sbjct: 448 cgcaacccgtcggccgacatgctgctcacggaggccgagct 488
>gb|CA019641.1|CA019641 HV12K08r HV Hordeum vulgare subsp. vulgare cDNA clone HV12K08
5-PRIME, mRNA sequence
Length = 485
Score = 381 bits (192), Expect = e-104
Identities = 303/340 (89%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 146 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 205
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 206 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 265
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 266 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 325
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 326 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 385
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 386 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 445
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagc 512
| |||||| || ||||||||||| |||||||| ||||
Sbjct: 446 cgcaacccgtcggccgacatgctgctcacggaggccgagc 485
>gb|AW982436.3|AW982436 HVSMEg0003E07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003E07f, mRNA sequence
Length = 859
Score = 379 bits (191), Expect = e-103
Identities = 341/391 (87%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 151 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 210
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 211 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 270
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 271 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 330
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 331 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 390
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| |||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 391 cgcacgggcctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 450
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| |||||| ||| | |||
Sbjct: 451 cgcaacccgtcggccgacatgctgctcacggaggccgagctcaacctggaccttatccgg 510
Query: 533 cgcgccagggtgttccactacggctccatct 563
|| ||| || | || |||||||| |||||||
Sbjct: 511 cgagcccggatctttcactacgggtccatct 541
>gb|BF263526.1|BF263526 HV_CEa0006P16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006P16f, mRNA sequence
Length = 909
Score = 373 bits (188), Expect = e-101
Identities = 385/448 (85%), Gaps = 2/448 (0%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 156 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 215
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 216 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 275
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 276 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 335
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | |||||||| |||||| ||| ||| | ||||| ||||||||| || ||||||||
Sbjct: 336 gtggagatcctgaatcagaacggcgtcaacgccgagggctgcctgttcaaccagcacgcg 395
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||| ||||
Sbjct: 396 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgtactac 455
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| || ||||||||||| |||||||| ||||| ||||||||||| | ||
Sbjct: 456 cgcaacccgtcggccgacatgctgctcacggaggccgagct-cacctgggcctgatccgc 514
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccga-gccgtgccgctcggc 591
|| || | | || || ||||| | ||||| |||||| |||| |||||||||||||||
Sbjct: 515 cgagcgcgcatctttcaatacgggtgcatctggctcattaccgaggccgtgccgctcggc 574
Query: 592 gcacatggccgccatgcgcgcagccaag 619
|||| ||| || ||||||||| ||||||
Sbjct: 575 gcacgtggacggcatgcgcgctgccaag 602
>gb|BI958022.1|BI958022 HVSMEn0012P20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0012P20f, mRNA sequence
Length = 803
Score = 369 bits (186), Expect = e-100
Identities = 297/334 (88%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
|||||||||||||||||||||||||| |||||||||||||| | ||||| ||||||||
Sbjct: 134 ttcggcgagatgctgatcgacttcgtgcccgacgtggccggcgtctcgctcgccgagtcc 193
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 194 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 253
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 254 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 313
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 314 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 373
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 374 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 433
Query: 473 aggaacccgagcgcggacatgctgctgacggagg 506
| |||||| || ||||||||||| |||||||
Sbjct: 434 cgcaacccgtcggccgacatgctgctcacggagg 467
>gb|BI776391.2|BI776391 EBpi05_SQ001_C05_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ001_C05 5', mRNA sequence
Length = 603
Score = 367 bits (185), Expect = e-100
Identities = 296/333 (88%)
Strand = Plus / Plus
Query: 770 gacgccaacgacgagaagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtc 829
|||||||||||||||||||||||||| ||||| ||||| || || |||||||||||| ||
Sbjct: 13 gacgccaacgacgagaagaacgtgctctccctctggttcgagggcctcaagctgctcatc 72
Query: 830 gtcaccgacggggacaagggatgcaggtacttcaccaaggacttcaagggcagcgtgccc 889
||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 73 gtcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaagggctccgtgccc 132
Query: 890 ggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctc 949
|||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ggctactctgtcaacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctc 192
Query: 950 ctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaagctccgcgaggct 1009
|||||||| ||| |||||||||||||||||||| |||| |||| ||||| | ||||
Sbjct: 193 ctcgtcaatgtctccaaggacgactccatcttctacaatgaggccaagctgagggaggtg 252
Query: 1010 ctcaagttctccaacgcctgcggcgccatctgcaccaccaagaagggcgccatcccggcg 1069
|| ||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 253 ctgcagttctcgaacgcttgcggtgccatctgcaccaccaagaagggagccatcccggcg 312
Query: 1070 ctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||| ||||||||||| ||| ||||||
Sbjct: 313 ctgcccaccaccgccaccgccctggagctcatc 345
>gb|BM442938.2|BM442938 EBro02_SQ001_P05_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_P05 5', mRNA sequence
Length = 460
Score = 365 bits (184), Expect = 3e-099
Identities = 271/300 (90%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 154 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctcgctcgccgagtcc 213
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 214 ggcggcttcgtcaaggcgcccggaggcgcgcccgccaacgtcgcctgcgccgtctccaag 273
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 274 ctcggcggctcctccgccttcgtcggcaagtttggcgacgacgagttcggccacatgctg 333
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | ||||| |||||||||||| ||||||||
Sbjct: 334 gtggagatcctgaagcagaacggcgtcaacgccgagggctgcctgttcgaccagcacgcg 393
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||||||| | |||| |||||||||||||||||||||
Sbjct: 394 cgcacggccctggccttcgtcacgctcaaggccaacggcgagcgcgagttcatgttctac 453
>gb|CB880486.1|CB880486 HM06K24w HM Hordeum vulgare subsp. vulgare cDNA clone HM06K24
3-PRIME, mRNA sequence
Length = 562
Score = 365 bits (184), Expect = 3e-099
Identities = 295/332 (88%)
Strand = Plus / Minus
Query: 771 acgccaacgacgagaagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtcg 830
||||||||||||||||||||||||| ||||| ||||| || || |||||||||||| |||
Sbjct: 562 acgccaacgacgagaagaacgtgctctccctctggttcgagggcctcaagctgctcatcg 503
Query: 831 tcaccgacggggacaagggatgcaggtacttcaccaaggacttcaagggcagcgtgcccg 890
|||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 502 tcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaagggctccgtgcccg 443
Query: 891 gcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcc 950
||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gctactctgtcaacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcc 383
Query: 951 tcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaagctccgcgaggctc 1010
||||||| ||| |||||||||||||||||||| |||| |||| ||||| | |||| |
Sbjct: 382 tcgtcaatgtctccaaggacgactccatcttctacaatgaggccaagctgagggaggtgc 323
Query: 1011 tcaagttctccaacgcctgcggcgccatctgcaccaccaagaagggcgccatcccggcgc 1070
| ||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 322 tgcagttctcgaacgcttgcggtgccatctgcaccaccaagaagggagccatcccggcgc 263
Query: 1071 tgcccacggtcgccaccgcccaggacctcatc 1102
||||||| ||||||||||| ||| ||||||
Sbjct: 262 tgcccaccaccgccaccgccctggagctcatc 231
>gb|BG309049.1|BG309049 HVSMEc0001M03f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0001M03f, mRNA sequence
Length = 866
Score = 363 bits (183), Expect = 1e-098
Identities = 374/438 (85%)
Strand = Plus / Plus
Query: 173 ttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgtcgctggccgagtcg 232
||||||||||||||||||||||||||||||||||||||||| | || || ||||||||
Sbjct: 150 ttcggcgagatgctgatcgacttcgtccccgacgtggccggcgtctctctcgccgagtcc 209
Query: 233 ggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcctgcgccatcgccaag 292
||||||||||||| ||| ||||| ||||||||||||||||||| ||||||| || ||||
Sbjct: 210 ggcggcttcgtcagggcgcccggaggcgcgcccgccaacgtcgtctgcgccgtctacaag 269
Query: 293 ctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttg 352
|| || || ||||||| ||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 270 ctggggggctcctccgtcttcgtcggcaagtttggcgacgacgagttcggccacatgctg 329
Query: 353 gtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcg 412
||| | ||||||||||||||| ||| ||| | | ||| |||||||||||| ||||||||
Sbjct: 330 gtggagatcctgaagcagaacggcgtcaacgccgggggctgcctgttcgaccagcacgcg 389
Query: 413 cggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctac 472
|| ||||| ||||||||||| ||||| | | | ||||||||||||||||||||||||||
Sbjct: 390 cgcacggccctggccttcgtaacgctaagggccaacggggagcgcgagttcatgttctac 449
Query: 473 aggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcgg 532
| |||||| | || ||||||||||| |||||||| ||||| |||||| ||| | ||
Sbjct: 450 cgcaacccgtgggccgacatgctgctcacggaggccgagctcaacctggaccttatccgc 509
Query: 533 cgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcg 592
|| ||| | ||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 510 cgagcccgcatgttccactacggctccatctcgctcatcaccgagccctggcgctcgggg 569
Query: 593 cacatggccgccatgcgc 610
|| | ||| ||||||||
Sbjct: 570 catgtagccnccatgcgc 587
>gb|CV054635.1|CV054635 BNEL111f3 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL111f3 5' similar to putative fructokinase
II, mRNA sequence
Length = 751
Score = 331 bits (167), Expect = 4e-089
Identities = 295/335 (88%), Gaps = 2/335 (0%)
Strand = Plus / Minus
Query: 770 gacgccaacg-acgagaagaa-cgtgctgtccctgtggtttgacgggctcaagctgctcg 827
|||||||||| |||||||||| |||||| ||||| ||||| || || ||||||||||||
Sbjct: 601 gacgccaacgnacgagaagaaacgtgctctccctctggttcgagggcctcaagctgctca 542
Query: 828 tcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttcaagggcagcgtgc 887
||||||||||||| || |||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 541 tcgtcaccgacggcgagaagggatgcaggtacttccccaaggacttcaagggctccgtgc 482
Query: 888 ccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccc 947
|||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccggctactctgtcaacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccc 422
Query: 948 tcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaagctccgcgagg 1007
|||||||||| ||| |||||||||||||||||||| |||| |||| ||||| | ||||
Sbjct: 421 tcctcgtcaatgtctccaaggacgactccatcttctacaatgaggccaagctgagggagg 362
Query: 1008 ctctcaagttctccaacgcctgcggcgccatctgcaccaccaagaagggcgccatcccgg 1067
|| ||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 361 tgctgcagttctcgaacgcttgcggtgccatctgcaccaccaagaagggagccatcccgg 302
Query: 1068 cgctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||||| ||||||||||| ||| ||||||
Sbjct: 301 cgctgcccaccaccgccaccgccctggagctcatc 267
>gb|BM817353.1|BM817353 HC106A07_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC106A07_T3.ab1 similar to Fructokinase,Protein kinase,,
mRNA sequence
Length = 632
Score = 321 bits (162), Expect = 4e-086
Identities = 270/306 (88%)
Strand = Plus / Plus
Query: 797 tccctgtggtttgacgggctcaagctgctcgtcgtcaccgacggggacaagggatgcagg 856
||||| ||||| || || |||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 34 tccctctggttcgagggcctcaagctgctcatcgtcaccgacggcgagaagggatgcagg 93
Query: 857 tacttcaccaaggacttcaagggcagcgtgcccggcttcaaggtcgacaccgtcgacacc 916
|||||||||||||||||||||||| ||||||||||| | ||| ||||||||||||||
Sbjct: 94 tacttcaccaaggacttcaagggctccgtgcccggctactctgtcaacaccgtcgacacc 153
Query: 917 accggcgccggcgacgccttcgtcggctccctcctcgtcaacgtcgccaaggacgactcc 976
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 154 accggcgccggcgacgccttcgtcggctccctcctcgtcaatgtctccaaggacgactcc 213
Query: 977 atcttccacaacgaggagaagctccgcgaggctctcaagttctccaacgcctgcggcgcc 1036
|||||| |||| |||| ||||| | |||| || ||||||| ||||| ||||| |||
Sbjct: 214 atcttctacaatgaggccaagctgagggaggtgctgcagttctcgaacgcttgcggtgcc 273
Query: 1037 atctgcaccaccaagaagggcgccatcccggcgctgcccacggtcgccaccgcccaggac 1096
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||
Sbjct: 274 atctgcaccaccaagaagggagccatcccggcgctgcccaccaccgccaccgccctggag 333
Query: 1097 ctcatc 1102
||||||
Sbjct: 334 ctcatc 339
>gb|CV060827.1|CV060827 BNEL61f5 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL61f5 5' similar to putative fructokinase
II, mRNA sequence
Length = 564
Score = 317 bits (160), Expect = 6e-085
Identities = 256/288 (88%)
Strand = Plus / Minus
Query: 815 ctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttc 874
|||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 556 ctcaagctgctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttc 497
Query: 875 aagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcc 934
|||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||
Sbjct: 496 aagggctccgtgcccggctactctgtcaacaccgtcgacaccaccggcgccggcgacgcc 437
Query: 935 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggag 994
||||||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 436 ttcgtcggctccctcctcgtcaatgtctccaaggacgactccatcttctacaatgaggcc 377
Query: 995 aagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcaccaccaagaag 1054
||||| | |||| || ||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 376 aagctgagggaggtgctgcagttctcgaacgcttgcggtgccatctgcaccaccaagaag 317
Query: 1055 ggcgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
|| |||||||||||||||||||| ||||||||||| ||| ||||||
Sbjct: 316 ggagccatcccggcgctgcccaccaccgccaccgccctggagctcatc 269
>gb|BM441064.2|BM441064 EBed02_SQ002_F05_R endosperm, 8 DPA, no treatment, cv Optic, EBed02
Hordeum vulgare subsp. vulgare cDNA clone
EBed02_SQ002_F05 5', mRNA sequence
Length = 325
Score = 313 bits (158), Expect = 1e-083
Identities = 269/306 (87%)
Strand = Plus / Plus
Query: 797 tccctgtggtttgacgggctcaagctgctcgtcgtcaccgacggggacaagggatgcagg 856
||||| ||||| || || |||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 4 tccctctggttcgagggcctcaagctgctcatcgtcaccgacggcgagaagggatgcagg 63
Query: 857 tacttcaccaaggacttcaagggcagcgtgcccggcttcaaggtcgacaccgtcgacacc 916
|||||||||||||||||||||||| ||||||||||| | ||| ||||||||||||||
Sbjct: 64 tacttcaccaaggacttcaagggctccgtgcccggctactctgtcaacaccgtcgacacc 123
Query: 917 accggcgccggcgacgccttcgtcggctccctcctcgtcaacgtcgccaaggacgactcc 976
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 124 accggcgccggcgacgccttcgtcggctccctcctcgtcaatgtctccaaggacgactcc 183
Query: 977 atcttccacaacgaggagaagctccgcgaggctctcaagttctccaacgcctgcggcgcc 1036
|||||| |||| |||| ||||| | |||| || ||||||| ||||| ||||| |||
Sbjct: 184 atcttctacaatgaggccaagctgagggaggtgctgcagttctcgaacgcttgcggtgcc 243
Query: 1037 atctgcaccaccaagaagggcgccatcccggcgctgcccacggtcgccaccgcccaggac 1096
||||||||||||||||| || |||||||||||||||||||| ||||||||||| |||
Sbjct: 244 atctgcaccaccaagaaaggagccatcccggcgctgcccaccaccgccaccgccctggag 303
Query: 1097 ctcatc 1102
||||||
Sbjct: 304 ctcatc 309
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 268,504
Number of Sequences: 312970
Number of extensions: 268504
Number of successful extensions: 86079
Number of sequences better than 0.5: 118
Number of HSP's better than 0.5 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85715
Number of HSP's gapped (non-prelim): 304
length of query: 1549
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1530
effective length of database: 169,188,109
effective search space: 258857806770
effective search space used: 258857806770
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)