BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4CL
(1986 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE215262.2|BE215262 HV_CEb0006F04f Hordeum vulgare seedl... 468 e-130
gb|BE454671.3|BE454671 HVSMEh0094P16f Hordeum vulgare 5-45 ... 240 1e-061
gb|BI956935.1|BI956935 HVSMEn0006D04f Hordeum vulgare rachi... 224 9e-057
gb|BQ763608.1|BQ763608 EBro02_SQ008_M23_R root, 3 week, hyd... 218 5e-055
gb|BQ766207.1|BQ766207 EBro08_SQ005_H07_R root, 3 week, dro... 218 5e-055
gb|AL510457.1|AL510457 AL510457 Hordeum vulgare Barke devel... 212 3e-053
gb|BQ465081.1|BQ465081 HU02J12r HU Hordeum vulgare subsp. v... 202 3e-050
gb|BF623201.2|BF623201 HVSMEa0015K22f Hordeum vulgare seedl... 192 3e-047
gb|CK124865.1|CK124865 BES1824110k15 BES1824 Hordeum vulgar... 192 3e-047
gb|BG344702.1|BG344702 HVSMEg0015E07f Hordeum vulgare pre-a... 188 5e-046
gb|AL507037.1|AL507037 AL507037 Hordeum vulgare Barke devel... 139 4e-031
gb|BF253382.2|BF253382 HVSMEf0001A07f Hordeum vulgare seedl... 137 2e-030
gb|BE213865.1|BE213865 HV_CEb0001H21f Hordeum vulgare seedl... 133 2e-029
gb|CK123691.1|CK123691 BES1824105b17 BES1824 Hordeum vulgar... 131 1e-028
gb|BI959998.1|BI959998 HVSMEn0022N01f Hordeum vulgare rachi... 111 9e-023
gb|BE193837.3|BE193837 HVSMEh0082K14f Hordeum vulgare 5-45 ... 111 9e-023
gb|BI959839.1|BI959839 HVSMEn0021P10f Hordeum vulgare rachi... 101 9e-020
gb|BE411374.1|BE411374 ISC004.H10F990609 ITEC ISC Barley Le... 96 5e-018
gb|AV833853.1|AV833853 AV833853 K. Sato unpublished cDNA li... 92 8e-017
gb|BE411643.1|BE411643 ISC007.G04F990714 ITEC ISC Barley Le... 80 3e-013
gb|CB882386.1|CB882386 HL01L15w HL Hordeum vulgare subsp. v... 80 3e-013
gb|BF064640.2|BF064640 HV_CEb0016I15f Hordeum vulgare seedl... 76 5e-012
gb|BF260187.2|BF260187 HVSMEf0021F10f Hordeum vulgare seedl... 74 2e-011
gb|BE519742.1|BE519742 HV_CEb0021A20f Hordeum vulgare seedl... 74 2e-011
gb|CA012845.1|CA012845 HT06J23r HT Hordeum vulgare subsp. v... 74 2e-011
gb|BI958356.1|BI958356 HVSMEn0014I24f Hordeum vulgare rachi... 72 8e-011
gb|BE195071.1|BE195071 HVSMEh0088D12f Hordeum vulgare 5-45 ... 64 2e-008
gb|CA018957.1|CA018957 HV10D20r HV Hordeum vulgare subsp. v... 58 1e-006
gb|CA023903.1|CA023903 HZ47M06r HZ Hordeum vulgare subsp. v... 56 5e-006
gb|BF623616.2|BF623616 HVSMEa0003A08f Hordeum vulgare seedl... 48 0.001
gb|BF621660.1|BF621660 HVSMEa0011M07f Hordeum vulgare seedl... 44 0.018
gb|BI958740.1|BI958740 HVSMEn0016G16f Hordeum vulgare rachi... 44 0.018
gb|BE214832.3|BE214832 HV_CEb0004M14f Hordeum vulgare seedl... 44 0.018
gb|BM442012.2|BM442012 EBan01_SQ001_L04_R anther, yellow st... 44 0.018
gb|BQ764372.1|BQ764372 EBan01_SQ005_M13_R anther, yellow st... 44 0.018
gb|BU996807.1|BU996807 HM14N06r HM Hordeum vulgare subsp. v... 44 0.018
gb|BI954261.1|BI954261 HVSMEm0016O05f Hordeum vulgare green... 42 0.069
gb|BF064783.2|BF064783 HV_CEb0019C15f Hordeum vulgare seedl... 42 0.069
gb|BF627337.3|BF627337 HVSMEb0004J13f Hordeum vulgare seedl... 42 0.069
gb|BF265731.3|BF265731 HV_CEa0013C24f Hordeum vulgare seedl... 42 0.069
gb|BF267399.2|BF267399 HV_CEa0017N02f Hordeum vulgare seedl... 40 0.27
gb|BI958629.1|BI958629 HVSMEn0016A02f Hordeum vulgare rachi... 40 0.27
gb|BM368135.2|BM368135 EBed01_SQ002_E11_R endosperm, 6 DPA,... 40 0.27
gb|BI779236.2|BI779236 EBro01_SQ003_G14_R root, 3 week, hyd... 40 0.27
gb|AU090088.1|AU090088 AU090088 Hordeum vulgare subsp. vulg... 38 1.1
gb|AU090112.1|AU090112 AU090112 Hordeum vulgare subsp. vulg... 38 1.1
gb|AL506647.1|AL506647 AL506647 Hordeum vulgare Barke devel... 38 1.1
gb|AL507042.1|AL507042 AL507042 Hordeum vulgare Barke devel... 38 1.1
gb|AL508817.1|AL508817 AL508817 Hordeum vulgare Barke devel... 38 1.1
gb|BF622477.2|BF622477 HVSMEa0004I05f Hordeum vulgare seedl... 38 1.1
gb|BF625782.2|BF625782 HVSMEa0013J11f Hordeum vulgare seedl... 38 1.1
gb|BF253700.1|BF253700 HVSMEf0001O04f Hordeum vulgare seedl... 38 1.1
gb|BF629748.2|BF629748 HVSMEb0013K20f Hordeum vulgare seedl... 38 1.1
gb|BF256377.2|BF256377 HVSMEf0009G22f Hordeum vulgare seedl... 38 1.1
gb|BG343049.1|BG343049 HVSMEg0001N14f Hordeum vulgare pre-a... 38 1.1
gb|BG344416.1|BG344416 HVSMEg0009D08f Hordeum vulgare pre-a... 38 1.1
gb|BI953021.1|BI953021 HVSMEm0009E21f Hordeum vulgare green... 38 1.1
gb|BI953298.1|BI953298 HVSMEm0012B09f Hordeum vulgare green... 38 1.1
gb|BI956628.1|BI956628 HVSMEn0004G20f Hordeum vulgare rachi... 38 1.1
gb|BE215242.1|BE215242 HV_CEb0006E05f Hordeum vulgare seedl... 38 1.1
gb|BG417061.1|BG417061 HVSMEk0016B06f Hordeum vulgare testa... 38 1.1
gb|BF627549.3|BF627549 HVSMEb0005C12f Hordeum vulgare seedl... 38 1.1
gb|BF629016.3|BF629016 HVSMEb0009I20f Hordeum vulgare seedl... 38 1.1
gb|BG300900.2|BG300900 HVSMEb0018O02f Hordeum vulgare seedl... 38 1.1
gb|BE195860.3|BE195860 HVSMEh0090K20f Hordeum vulgare 5-45 ... 38 1.1
gb|BE196297.3|BE196297 HVSMEh0091O17f Hordeum vulgare 5-45 ... 38 1.1
gb|BG365747.2|BG365747 HVSMEi0004A16f Hordeum vulgare 20 DA... 38 1.1
gb|BF261803.3|BF261803 HV_CEa0002E08f Hordeum vulgare seedl... 38 1.1
gb|BF265398.3|BF265398 HV_CEa0012C06f Hordeum vulgare seedl... 38 1.1
gb|BF267276.3|BF267276 HV_CEa0017H05f Hordeum vulgare seedl... 38 1.1
gb|AV916388.1|AV916388 AV916388 K. Sato unpublished cDNA li... 38 1.1
gb|BM816288.1|BM816288 HB03E10_T3.ab1 HB Hordeum vulgare su... 38 1.1
gb|BQ460575.1|BQ460575 HA06I19r HA Hordeum vulgare subsp. v... 38 1.1
gb|BQ461073.1|BQ461073 HE01E18r HE Hordeum vulgare subsp. v... 38 1.1
gb|BQ466657.1|BQ466657 HS01C22T HS Hordeum vulgare subsp. v... 38 1.1
gb|BQ466979.1|BQ466979 HS02C22r HS Hordeum vulgare subsp. v... 38 1.1
gb|BQ467605.1|BQ467605 HS04F02r HS Hordeum vulgare subsp. v... 38 1.1
gb|BQ468485.1|BQ468485 HM01G09T HM Hordeum vulgare subsp. v... 38 1.1
gb|BQ471593.1|BQ471593 HV02O07r HV Hordeum vulgare subsp. v... 38 1.1
gb|BQ660193.1|BQ660193 HI01G10w HI Hordeum vulgare subsp. v... 38 1.1
gb|BQ660387.1|BQ660387 HI02D23u HI Hordeum vulgare subsp. v... 38 1.1
gb|BQ665138.1|BQ665138 HX02E09u HX Hordeum vulgare subsp. v... 38 1.1
gb|BQ665452.1|BQ665452 HX03K16u HX Hordeum vulgare subsp. v... 38 1.1
gb|BM377469.2|BM377469 EBem04_SQ003_D17_R embryo, 12 DPA, n... 38 1.1
gb|BM368689.2|BM368689 EBem08_SQ004_F08_R embryo, 40 DPA, n... 38 1.1
gb|BM099865.2|BM099865 EBes01_SQ004_H24_R embryo sac, 4-6 D... 38 1.1
gb|BM096497.2|BM096497 EBma03_SQ001_O01_R maternal, 8 DPA, ... 38 1.1
gb|BM373327.2|BM373327 EBma04_SQ004_A13_R maternal, 10 DPA,... 38 1.1
gb|BM098220.2|BM098220 EBpi03_SQ002_O06_R pistil, 4 DPA, no... 38 1.1
gb|BM443588.2|BM443588 EBro02_SQ005_M15_R root, 3 week, hyd... 38 1.1
gb|BI778631.2|BI778631 EBro07_SQ003_N18_R root, 3 week, red... 38 1.1
gb|BQ754719.1|BQ754719 EBed01_SQ003_J22_R endosperm, 6 DPA,... 38 1.1
gb|BQ760390.1|BQ760390 EBro01_SQ002_P22_R root, 3 week, hyd... 38 1.1
gb|BQ765035.1|BQ765035 EBca01_SQ005_I17_R carpel, pre-anthe... 38 1.1
gb|BQ765785.1|BQ765785 EBro03_SQ008_L06_R root, 3 week, wat... 38 1.1
gb|BU969285.1|BU969285 HB11B11r BC Hordeum vulgare subsp. v... 38 1.1
gb|BU978604.1|BU978604 HA13L13r HA Hordeum vulgare subsp. v... 38 1.1
gb|BU982452.1|BU982452 HA26J13r HA Hordeum vulgare subsp. v... 38 1.1
gb|BU984308.1|BU984308 HF03J04r HF Hordeum vulgare subsp. v... 38 1.1
gb|BU984708.1|BU984708 HF04M02r HF Hordeum vulgare subsp. v... 38 1.1
gb|BU984776.1|BU984776 HF04P15r HF Hordeum vulgare subsp. v... 38 1.1
gb|BU987135.1|BU987135 HF13O09r HF Hordeum vulgare subsp. v... 38 1.1
gb|BU990035.1|BU990035 HF23M21r HF Hordeum vulgare subsp. v... 38 1.1
gb|BU996007.1|BU996007 HM12B11r HM Hordeum vulgare subsp. v... 38 1.1
gb|CA000092.1|CA000092 HS09L23u HS Hordeum vulgare subsp. v... 38 1.1
gb|CA002390.1|CA002390 HS07F15r HS Hordeum vulgare subsp. v... 38 1.1
gb|CA003717.1|CA003717 HS15F13r HS Hordeum vulgare subsp. v... 38 1.1
gb|CA006632.1|CA006632 HU05E01r HU Hordeum vulgare subsp. v... 38 1.1
gb|CA023179.1|CA023179 HZ45H13r HZ Hordeum vulgare subsp. v... 38 1.1
gb|CA023908.1|CA023908 HZ47M13r HZ Hordeum vulgare subsp. v... 38 1.1
gb|CA031142.1|CA031142 HX09C06r HX Hordeum vulgare subsp. v... 38 1.1
gb|CB859764.1|CB859764 HI11I11w HI Hordeum vulgare subsp. v... 38 1.1
gb|CB874990.1|CB874990 HX06P03w HX Hordeum vulgare subsp. v... 38 1.1
gb|CB876663.1|CB876663 HX11P14w HX Hordeum vulgare subsp. v... 38 1.1
gb|CB880578.1|CB880578 HM06P12w HM Hordeum vulgare subsp. v... 38 1.1
gb|CB883509.1|CB883509 HQ02H15w HQ Hordeum vulgare subsp. v... 38 1.1
gb|CV053733.1|CV053733 BNEL102f10 Barley EST endosperm libr... 38 1.1
gb|CV055006.1|CV055006 BNEL115g12 Barley EST endosperm libr... 38 1.1
gb|CV055107.1|CV055107 BNEL116h6 Barley EST endosperm libra... 38 1.1
gb|CV055394.1|CV055394 BNEL11B12 Barley EST endosperm libra... 38 1.1
gb|CV055620.1|CV055620 BNEL121f5 Barley EST endosperm libra... 38 1.1
gb|CV055711.1|CV055711 BNEL122f3 Barley EST endosperm libra... 38 1.1
gb|CV056581.1|CV056581 BNEL19D12 Barley EST endosperm libra... 38 1.1
gb|CV056664.1|CV056664 BNEL1C3 Barley EST endosperm library... 38 1.1
gb|CV057009.1|CV057009 BNEL23a4 Barley EST endosperm librar... 38 1.1
gb|CV057170.1|CV057170 BNEL24g6 Barley EST endosperm librar... 38 1.1
gb|CV057426.1|CV057426 BNEL27g1 Barley EST endosperm librar... 38 1.1
gb|CV057542.1|CV057542 BNEL29a4 Barley EST endosperm librar... 38 1.1
gb|CV057957.1|CV057957 BNEL32g3 Barley EST endosperm librar... 38 1.1
gb|CV058834.1|CV058834 BNEL41e2 Barley EST endosperm librar... 38 1.1
gb|CV060485.1|CV060485 BNEL58f6 Barley EST endosperm librar... 38 1.1
gb|CV061141.1|CV061141 BNEL65d6 Barley EST endosperm librar... 38 1.1
gb|CV062435.1|CV062435 BNEL7A2 Barley EST endosperm library... 38 1.1
gb|CV062651.1|CV062651 BNEL81d8 Barley EST endosperm librar... 38 1.1
gb|CV063127.1|CV063127 BNEL86h7 Barley EST endosperm librar... 38 1.1
gb|CV064173.1|CV064173 BNEL98h12 Barley EST endosperm libra... 38 1.1
gb|BE411138.1|BE411138 ISC002.D12F990513 ITEC ISC Barley Le... 36 4.3
gb|BE421197.1|BE421197 HWM006.G10 ITEC HWM Barley Leaf Libr... 36 4.3
gb|AL500116.1|AL500116 AL500116 Hordeum vulgare Barke etiol... 36 4.3
gb|AL502400.1|AL502400 AL502400 Hordeum vulgare Barke roots... 36 4.3
gb|AL504230.1|AL504230 AL504230 Hordeum vulgare Barke roots... 36 4.3
gb|AL505142.1|AL505142 AL505142 Hordeum vulgare Barke roots... 36 4.3
gb|AL507401.1|AL507401 AL507401 Hordeum vulgare Barke devel... 36 4.3
gb|AL509011.1|AL509011 AL509011 Hordeum vulgare Barke devel... 36 4.3
gb|AL509270.1|AL509270 AL509270 Hordeum vulgare Barke devel... 36 4.3
gb|BF621225.2|BF621225 HVSMEa0006B19f Hordeum vulgare seedl... 36 4.3
gb|BG299762.1|BG299762 HVSMEa0021L10f Hordeum vulgare seedl... 36 4.3
gb|BE602014.1|BE602014 HVSMEh0102A07f Hordeum vulgare 5-45 ... 36 4.3
gb|BF254526.1|BF254526 HVSMEf0004E11f Hordeum vulgare seedl... 36 4.3
gb|BG300629.1|BG300629 HVSMEb0017L22f Hordeum vulgare seedl... 36 4.3
gb|BG301107.1|BG301107 HVSMEb0019J08f Hordeum vulgare seedl... 36 4.3
gb|BF616609.2|BF616609 HVSMEc0010M07f Hordeum vulgare seedl... 36 4.3
gb|BF620489.2|BF620489 HVSMEc0020A21f Hordeum vulgare seedl... 36 4.3
gb|BF620533.2|BF620533 HVSMEc0020C18f Hordeum vulgare seedl... 36 4.3
gb|BG309761.1|BG309761 HVSMEc0012H12f Hordeum vulgare seedl... 36 4.3
gb|BG309914.1|BG309914 HVSMEc0014L03f Hordeum vulgare seedl... 36 4.3
gb|AW983295.2|AW983295 HVSMEg0010B19f Hordeum vulgare pre-a... 36 4.3
gb|BG343538.1|BG343538 HVSMEg0006F08f Hordeum vulgare pre-a... 36 4.3
gb|BE601561.2|BE601561 HVSMEh0098I02f Hordeum vulgare 5-45 ... 36 4.3
gb|BE601959.2|BE601959 HVSMEh0100H24f Hordeum vulgare 5-45 ... 36 4.3
gb|BI949829.1|BI949829 HVSMEl0016F06f Hordeum vulgare spike... 36 4.3
gb|BI951853.1|BI951853 HVSMEm0003E13f Hordeum vulgare green... 36 4.3
gb|BI954332.1|BI954332 HVSMEm0017E17f Hordeum vulgare green... 36 4.3
gb|BI956135.1|BI956135 HVSMEm0025M12f Hordeum vulgare green... 36 4.3
gb|BI956317.1|BI956317 HVSMEn0002F14f Hordeum vulgare rachi... 36 4.3
gb|BI957330.1|BI957330 HVSMEn0008P13f Hordeum vulgare rachi... 36 4.3
gb|BF261492.1|BF261492 HV_CEa0001G21f Hordeum vulgare seedl... 36 4.3
gb|BF262674.1|BF262674 HV_CEa0004K03f Hordeum vulgare seedl... 36 4.3
gb|BF264177.2|BF264177 HV_CEa0008L17f Hordeum vulgare seedl... 36 4.3
gb|BF064652.2|BF064652 HV_CEb0016K19f Hordeum vulgare seedl... 36 4.3
gb|BG415088.1|BG415088 HVSMEk0005B17f Hordeum vulgare testa... 36 4.3
gb|BG416105.1|BG416105 HVSMEk0009M10f Hordeum vulgare testa... 36 4.3
gb|BG416670.1|BG416670 HVSMEk0014A24f Hordeum vulgare testa... 36 4.3
gb|BI959254.1|BI959254 HVSMEn0018O18f Hordeum vulgare rachi... 36 4.3
gb|BI960293.1|BI960293 HVSMEn0024C02f Hordeum vulgare rachi... 36 4.3
gb|BI960599.1|BI960599 HVSMEn0025E20f Hordeum vulgare rachi... 36 4.3
gb|BE230920.2|BE230920 HVSMEg0001K06f Hordeum vulgare pre-a... 36 4.3
gb|BE231110.2|BE231110 HVSMEg0016L15f Hordeum vulgare pre-a... 36 4.3
gb|BF626900.3|BF626900 HVSMEb0001K08f Hordeum vulgare seedl... 36 4.3
gb|BF256595.3|BF256595 HVSMEf0010H05f Hordeum vulgare seedl... 36 4.3
gb|BG343326.2|BG343326 HVSMEg0005G20f Hordeum vulgare pre-a... 36 4.3
gb|BG344371.2|BG344371 HVSMEg0009B07f Hordeum vulgare pre-a... 36 4.3
gb|BE193675.3|BE193675 HVSMEh0082C16f Hordeum vulgare 5-45 ... 36 4.3
gb|BE194157.3|BE194157 HVSMEh0084F07f Hordeum vulgare 5-45 ... 36 4.3
gb|BE603125.3|BE603125 HVSMEh0102B12f Hordeum vulgare 5-45 ... 36 4.3
gb|BG416947.2|BG416947 HVSMEk0015E23f Hordeum vulgare testa... 36 4.3
gb|BF262577.3|BF262577 HV_CEa0004G01f Hordeum vulgare seedl... 36 4.3
gb|BE215179.2|BE215179 HV_CEb0006B09f Hordeum vulgare seedl... 36 4.3
gb|BF066019.3|BF066019 HV_CEb0014J22f Hordeum vulgare seedl... 36 4.3
gb|BE558631.3|BE558631 HV_CEb0019I06f Hordeum vulgare seedl... 36 4.3
gb|BM374596.1|BM374596 EBma05_SQ002_B18_R maternal, 12 DPA,... 36 4.3
gb|BM374940.1|BM374940 EBma05_SQ003_L07_R maternal, 12 DPA,... 36 4.3
gb|AV911163.1|AV911163 AV911163 K. Sato unpublished cDNA li... 36 4.3
gb|AV912874.1|AV912874 AV912874 K. Sato unpublished cDNA li... 36 4.3
gb|AV917017.1|AV917017 AV917017 K. Sato unpublished cDNA li... 36 4.3
gb|AV917622.1|AV917622 AV917622 K. Sato unpublished cDNA li... 36 4.3
gb|AV918270.1|AV918270 AV918270 K. Sato unpublished cDNA li... 36 4.3
gb|AV919176.1|AV919176 AV919176 K. Sato unpublished cDNA li... 36 4.3
gb|AV920296.1|AV920296 AV920296 K. Sato unpublished cDNA li... 36 4.3
gb|AV921426.1|AV921426 AV921426 K. Sato unpublished cDNA li... 36 4.3
gb|AV928187.1|AV928187 AV928187 K. Sato unpublished cDNA li... 36 4.3
gb|AV929618.1|AV929618 AV929618 K. Sato unpublished cDNA li... 36 4.3
gb|BM444378.1|BM444378 EBem09_SQ004_P15_R embryo, 1 Day ger... 36 4.3
gb|BM816676.1|BM816676 HB01C09_T3.ab1 HB Hordeum vulgare su... 36 4.3
gb|AJ433822.1|AJ433822 AJ433822 S00002 Hordeum vulgare subs... 36 4.3
gb|AJ463173.1|AJ463173 AJ463173 S00002 Hordeum vulgare subs... 36 4.3
gb|AJ463537.1|AJ463537 AJ463537 S00002 Hordeum vulgare subs... 36 4.3
gb|AJ463538.1|AJ463538 AJ463538 S00002 Hordeum vulgare subs... 36 4.3
gb|AJ463539.1|AJ463539 AJ463539 S00002 Hordeum vulgare subs... 36 4.3
gb|AJ463541.1|AJ463541 AJ463541 S00002 Hordeum vulgare subs... 36 4.3
gb|BJ466310.1|BJ466310 BJ466310 K. Sato unpublished cDNA li... 36 4.3
gb|BJ469245.1|BJ469245 BJ469245 K. Sato unpublished cDNA li... 36 4.3
gb|BJ471166.1|BJ471166 BJ471166 K. Sato unpublished cDNA li... 36 4.3
gb|BJ473797.1|BJ473797 BJ473797 K. Sato unpublished cDNA li... 36 4.3
gb|BJ474451.1|BJ474451 BJ474451 K. Sato unpublished cDNA li... 36 4.3
gb|BQ459615.1|BQ459615 HA08J14r HA Hordeum vulgare subsp. v... 36 4.3
gb|BQ460823.1|BQ460823 HA05N02r HA Hordeum vulgare subsp. v... 36 4.3
gb|BQ462848.1|BQ462848 HI02D05r HI Hordeum vulgare subsp. v... 36 4.3
gb|BQ463458.1|BQ463458 HI05F11r HI Hordeum vulgare subsp. v... 36 4.3
gb|BQ463967.1|BQ463967 HG01P18r HG Hordeum vulgare subsp. v... 36 4.3
gb|BQ469073.1|BQ469073 HM03E21r HM Hordeum vulgare subsp. v... 36 4.3
gb|BQ469162.1|BQ469162 HM03J12r HM Hordeum vulgare subsp. v... 36 4.3
gb|BQ469206.1|BQ469206 HM03L12r HM Hordeum vulgare subsp. v... 36 4.3
gb|BQ656606.1|BQ656606 HA02O01u HA Hordeum vulgare subsp. v... 36 4.3
gb|BQ660336.1|BQ660336 HI01P19w HI Hordeum vulgare subsp. v... 36 4.3
gb|BQ663997.1|BQ663997 HU04P10u HU Hordeum vulgare subsp. v... 36 4.3
gb|BM442020.2|BM442020 EBan01_SQ001_M06_R anther, yellow st... 36 4.3
gb|BM442660.2|BM442660 EBan01_SQ003_M21_R anther, yellow st... 36 4.3
gb|BM441153.2|BM441153 EBed02_SQ002_J08_R endosperm, 8 DPA,... 36 4.3
gb|BM097608.2|BM097608 EBem04_SQ002_D02_R embryo, 12 DPA, n... 36 4.3
gb|BM097859.2|BM097859 EBem04_SQ002_O14_R embryo, 12 DPA, n... 36 4.3
gb|BM368923.2|BM368923 EBem07_SQ002_A08_R embryo, 28 DPA, n... 36 4.3
gb|BM376037.2|BM376037 EBma01_SQ002_C14_R maternal, 4 DPA, ... 36 4.3
gb|BM096545.2|BM096545 EBma03_SQ001_O19_R maternal, 8 DPA, ... 36 4.3
gb|BM100749.2|BM100749 EBpi01_SQ001_I05_R pistil, 1 DPA, no... 36 4.3
gb|BI776795.2|BI776795 EBpi07_SQ001_M11_R pistil, 12 DPA, n... 36 4.3
gb|BI778809.2|BI778809 EBro01_SQ001_J09_R root, 3 week, hyd... 36 4.3
gb|BQ754384.1|BQ754384 EBca01_SQ003_M16_R carpel, pre-anthe... 36 4.3
gb|BQ758056.1|BQ758056 EBes01_SQ001_O12_R embryo sac, 4-6 D... 36 4.3
gb|BQ759857.1|BQ759857 EBpi05_SQ004_J17_R pistil, 8 DPA, no... 36 4.3
gb|BQ760097.1|BQ760097 EBpi07_SQ003_O01_R pistil, 12 DPA, n... 36 4.3
gb|BQ761714.1|BQ761714 EBem10_SQ001_K14_R embryo, 2 Day ger... 36 4.3
gb|BQ767641.1|BQ767641 EBro08_SQ009_O12_R root, 3 week, dro... 36 4.3
gb|BQ767699.1|BQ767699 EBro08_SQ009_I17_R root, 3 week, dro... 36 4.3
gb|BU970065.1|BU970065 HB13H20r BC Hordeum vulgare subsp. v... 36 4.3
gb|BU971951.1|BU971951 HB20C16r BC Hordeum vulgare subsp. v... 36 4.3
gb|BU976524.1|BU976524 HA03N15r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU976575.1|BU976575 HA03O23r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU977038.1|BU977038 HA10L20r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU977039.1|BU977039 HA10L20u HA Hordeum vulgare subsp. v... 36 4.3
gb|BU979995.1|BU979995 HA18C15r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU980594.1|BU980594 HA21B21r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU980748.1|BU980748 HA21J07r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU980781.1|BU980781 HA21K21r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU981821.1|BU981821 HA24L19r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU981933.1|BU981933 HA25A16r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU981968.1|BU981968 HA25C05r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU982014.1|BU982014 HA25E12r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU983398.1|BU983398 HA29J15r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU983515.1|BU983515 HA29P18r HA Hordeum vulgare subsp. v... 36 4.3
gb|BU990334.1|BU990334 HF24L15r HF Hordeum vulgare subsp. v... 36 4.3
gb|BU995338.1|BU995338 HM09O23r HM Hordeum vulgare subsp. v... 36 4.3
gb|BU995673.1|BU995673 HM10P24r HM Hordeum vulgare subsp. v... 36 4.3
gb|BU997350.1|BU997350 HI07L15r HI Hordeum vulgare subsp. v... 36 4.3
gb|BU998151.1|BU998151 HI10C11r HI Hordeum vulgare subsp. v... 36 4.3
gb|BU998650.1|BU998650 HI11L23r HI Hordeum vulgare subsp. v... 36 4.3
gb|BU998690.1|BU998690 HI11N24r HI Hordeum vulgare subsp. v... 36 4.3
gb|BU999284.1|BU999284 HI14A18r HI Hordeum vulgare subsp. v... 36 4.3
gb|BU999795.1|BU999795 HI15N05r HI Hordeum vulgare subsp. v... 36 4.3
gb|CA000507.1|CA000507 HS08D22u HS Hordeum vulgare subsp. v... 36 4.3
gb|CA000736.1|CA000736 HS07A05u HS Hordeum vulgare subsp. v... 36 4.3
gb|CA008229.1|CA008229 HU10E24r HU Hordeum vulgare subsp. v... 36 4.3
gb|CA008367.1|CA008367 HU10L20r HU Hordeum vulgare subsp. v... 36 4.3
gb|CA009260.1|CA009260 HU13K03r HU Hordeum vulgare subsp. v... 36 4.3
gb|CA013068.1|CA013068 HT07E19r HT Hordeum vulgare subsp. v... 36 4.3
gb|CA015009.1|CA015009 HT12P23r HT Hordeum vulgare subsp. v... 36 4.3
gb|CA017943.1|CA017943 HV06O09r HV Hordeum vulgare subsp. v... 36 4.3
gb|CA020525.1|CA020525 HZ36J05r HZ Hordeum vulgare subsp. v... 36 4.3
gb|CA023075.1|CA023075 HZ45C18r HZ Hordeum vulgare subsp. v... 36 4.3
gb|CA023690.1|CA023690 HZ47B11r HZ Hordeum vulgare subsp. v... 36 4.3
gb|CA024018.1|CA024018 HZ48C18r HZ Hordeum vulgare subsp. v... 36 4.3
gb|CA024101.1|CA024101 HZ48F21r HZ Hordeum vulgare subsp. v... 36 4.3
gb|CA024719.1|CA024719 HZ50B19r HZ Hordeum vulgare subsp. v... 36 4.3
gb|CA025242.1|CA025242 HZ51J09r HZ Hordeum vulgare subsp. v... 36 4.3
gb|CA028711.1|CA028711 HZ63A13r HZ Hordeum vulgare subsp. v... 36 4.3
gb|CA028867.1|CA028867 HZ63H16r HZ Hordeum vulgare subsp. v... 36 4.3
gb|CA029801.1|CA029801 HX05E03r HX Hordeum vulgare subsp. v... 36 4.3
gb|CA030133.1|CA030133 HX06C23r HX Hordeum vulgare subsp. v... 36 4.3
gb|CA031351.1|CA031351 HX09L08r HX Hordeum vulgare subsp. v... 36 4.3
gb|CA031563.1|CA031563 HX10G12r HX Hordeum vulgare subsp. v... 36 4.3
gb|BJ544430.1|BJ544430 BJ544430 K. Sato unpublished cDNA li... 36 4.3
gb|BJ545885.1|BJ545885 BJ545885 K. Sato unpublished cDNA li... 36 4.3
gb|BJ549965.1|BJ549965 BJ549965 K. Sato unpublished cDNA li... 36 4.3
gb|CB860143.1|CB860143 HI12M20w HI Hordeum vulgare subsp. v... 36 4.3
gb|CB874434.1|CB874434 HX05E03w HX Hordeum vulgare subsp. v... 36 4.3
gb|CB874491.1|CB874491 HX05G21w HX Hordeum vulgare subsp. v... 36 4.3
gb|CB874741.1|CB874741 HX06C23w HX Hordeum vulgare subsp. v... 36 4.3
gb|CB875904.1|CB875904 HX09L08w HX Hordeum vulgare subsp. v... 36 4.3
gb|CB876447.1|CB876447 HX11E22w HX Hordeum vulgare subsp. v... 36 4.3
gb|CB878948.1|CB878948 HP10G12T HP Hordeum vulgare subsp. v... 36 4.3
gb|CB880094.1|CB880094 HM05H14w HM Hordeum vulgare subsp. v... 36 4.3
gb|CB881082.1|CB881082 HM08L14w HM Hordeum vulgare subsp. v... 36 4.3
gb|CB881476.1|CB881476 HM09O23w HM Hordeum vulgare subsp. v... 36 4.3
gb|CB882515.1|CB882515 HL02B09w HL Hordeum vulgare subsp. v... 36 4.3
gb|CB882545.1|CB882545 HL02C19w HL Hordeum vulgare subsp. v... 36 4.3
gb|CB883046.1|CB883046 HQ01A11w HQ Hordeum vulgare subsp. v... 36 4.3
gb|CB884028.1|CB884028 HM10F10r HM Hordeum vulgare subsp. v... 36 4.3
gb|CB884060.1|CB884060 HM12D06r HM Hordeum vulgare subsp. v... 36 4.3
gb|CB884065.1|CB884065 HM12J10r HM Hordeum vulgare subsp. v... 36 4.3
gb|CB884067.1|CB884067 HM12L23r HM Hordeum vulgare subsp. v... 36 4.3
gb|CB884085.1|CB884085 HM14A19r HM Hordeum vulgare subsp. v... 36 4.3
gb|CV053753.1|CV053753 BNEL102g7 Barley EST endosperm libra... 36 4.3
gb|CV053761.1|CV053761 BNEL102h3 Barley EST endosperm libra... 36 4.3
gb|CV053874.1|CV053874 BNEL104b3 Barley EST endosperm libra... 36 4.3
gb|CV054157.1|CV054157 BNEL107d3 Barley EST endosperm libra... 36 4.3
gb|CV054398.1|CV054398 BNEL10B10 Barley EST endosperm libra... 36 4.3
gb|CV054632.1|CV054632 BNEL111f11 Barley EST endosperm libr... 36 4.3
gb|CV056871.1|CV056871 BNEL21e12 Barley EST endosperm libra... 36 4.3
gb|CV056980.1|CV056980 BNEL22g10 Barley EST endosperm libra... 36 4.3
gb|CV057222.1|CV057222 BNEL25d11 Barley EST endosperm libra... 36 4.3
gb|CV057378.1|CV057378 BNEL27b4 Barley EST endosperm librar... 36 4.3
gb|CV059085.1|CV059085 BNEL44b7 Barley EST endosperm librar... 36 4.3
gb|CV060099.1|CV060099 BNEL54d4 Barley EST endosperm librar... 36 4.3
gb|CV060348.1|CV060348 BNEL57b4 Barley EST endosperm librar... 36 4.3
gb|CV061022.1|CV061022 BNEL64a9 Barley EST endosperm librar... 36 4.3
gb|CV061064.1|CV061064 BNEL64e6 Barley EST endosperm librar... 36 4.3
gb|CV061830.1|CV061830 BNEL73d12 Barley EST endosperm libra... 36 4.3
gb|CV062236.1|CV062236 BNEL77g7 Barley EST endosperm librar... 36 4.3
gb|CV063180.1|CV063180 BNEL87e12 Barley EST endosperm libra... 36 4.3
gb|CV063279.1|CV063279 BNEL88f10 Barley EST endosperm libra... 36 4.3
gb|CV063406.1|CV063406 BNEL89h9 Barley EST endosperm librar... 36 4.3
gb|CV063527.1|CV063527 BNEL90c8 Barley EST endosperm librar... 36 4.3
gb|CK122110.1|CK122110 BES1824101h12 BES1824 Hordeum vulgar... 36 4.3
gb|CK122651.1|CK122651 BES1824104o18 BES1824 Hordeum vulgar... 36 4.3
gb|CK122767.1|CK122767 BES1824105l08 BES1824 Hordeum vulgar... 36 4.3
gb|CK124376.1|CK124376 BES1824108j05 BES1824 Hordeum vulgar... 36 4.3
gb|CK124706.1|CK124706 BES1824110b21 BES1824 Hordeum vulgar... 36 4.3
gb|CK125120.1|CK125120 BES1824106m04 BES1824 Hordeum vulgar... 36 4.3
gb|CK125807.1|CK125807 BES1824110n18 BES1824 Hordeum vulgar... 36 4.3
emb|AJ234569.1|HVU234569 Hordeum vulgare genomic DNA fragme... 36 4.3
emb|Z23131.1|HVPRX6GNA H.vulgare prx6 gene, complete CDS 36 4.3
>gb|BE215262.2|BE215262 HV_CEb0006F04f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006F04f, mRNA sequence
Length = 476
Score = 468 bits (236), Expect = e-130
Identities = 416/476 (87%)
Strand = Plus / Plus
Query: 824 acaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgcccatgttcc 883
||||||| ||||||||| |||||||||||||||| || ||||||||||| ||||||||||
Sbjct: 1 acaaccccaacctccacctccgggaggacgacgtggtgctctgcgtgctccccatgttcc 60
Query: 884 acgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctcgtga 943
|||| ||||||||||||||||||||||| |||||| ||||||||||||| || |||||
Sbjct: 61 acgtctactcgctgcactccatcctgctctgcgggctgcgcgccggcgccgccctcgtcg 120
Query: 944 tcatgaagcgcttcgacactctccgcatgttcgagctggtgaagaggcacggcatcacga 1003
||||||||||||||||||| || ||| | ||||||||| || | ||||||||||| |
Sbjct: 121 tcatgaagcgcttcgacacggtcaagatgatggagctggtggagcgccacggcatcacca 180
Query: 1004 tcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagcgacgccatcgaccgcc 1063
||| ||||||||||| |||||||| || ||||||| |||| |||||||||| |||||||
Sbjct: 181 tcgcgccgctcgtgccgcccatcgtcgtcgagatggccaagggcgacgccatggaccgcc 240
Query: 1064 acgacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggagctgc 1123
|||||||||| || || |||||||||||||| || |||||||||||||||||||||||||
Sbjct: 241 acgacctctcctccgtccgcatggtcatctccggcgccgcgcccatgggcaaggagctgc 300
Query: 1124 aggacctgctgcgcgccaagctccctcgcgccgtgctcggacagggttatgggatgacag 1183
||||| | | | |||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 301 aggacatcatccacgccaagctccccaatgccgtgctcggacagggctatgggatgacag 360
Query: 1184 aggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccggtgaagt 1243
||||||| |||||||| ||||||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 361 aggcaggtccggtgctgtcgatgtgcatggcgttcgccaaagagccgtcgccggtgaagt 420
Query: 1244 ccggtgcctgcggcacggtggtgaggaatgccgagctaaagatcatcgacccggag 1299
| || || |||||||||||||| ||||| || ||||| |||||| |||||||||||
Sbjct: 421 caggcgcatgcggcacggtggtaaggaacgcggagctcaagatcgtcgacccggag 476
>gb|BE454671.3|BE454671 HVSMEh0094P16f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0094P16f, mRNA sequence
Length = 685
Score = 240 bits (121), Expect = 1e-061
Identities = 385/473 (81%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||||||||||||| | |||
Sbjct: 10 cgcatggtcatgtccggcgccgcgcccatgggcaaggagctgcaggacgccttcatggcc 69
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||| ||||| || |||||||| ||||| || ||||||||
Sbjct: 70 aagatccccaacgccgtgctcgggcaggggtacgggatgacggaggccgggccggtgctg 129
Query: 1201 tcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacg 1260
| |||||| ||||||| |||||||||||||| ||| |||||||| | |||||||||
Sbjct: 130 gccatgtgcctggcgttcgccaaggagccgttcaaggtcaagtccgggtcgtgcggcacg 189
Query: 1261 gtggtgaggaatgccgagctaaagatcatcgacccggagaccgggctgtccctccaccgc 1320
|||||| | || |||| ||| |||||| ||||||| || ||||| |||||| |||
Sbjct: 190 gtggtgcgcaacgccgggctcaagatcgtcgaccccgacaccggcgcctccctcggccgg 249
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
||||||||||| ||||| |||||| | || ||||| | |||||||| ||||| ||| ||
Sbjct: 250 aaccagcccggcgagatctgcatccgcggggagcagatcatgaaaggttaccttaacgac 309
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|| || | || ||| ||||||||| ||| || |||||||||||||||||||| ||
Sbjct: 310 ccagaatccaccaagaacaccatcgacaaggatggctggctgcacaccggagacatcggc 369
Query: 1441 tacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtac 1500
||||||||||| ||||||||||||||| || ||| ||||||||||| |||||||||||
Sbjct: 370 atcgtcgacgacgacgacgagatcttcattgttgacaggctcaaggagatcatcaagtac 429
Query: 1501 aaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcccaccc 1553
||||| ||||| || || ||||| |||||||||||| | |||||| |||||||
Sbjct: 430 aagggcttccaggtggcgccggcagagctcgaggccctcctcatcacccaccc 482
Score = 38.2 bits (19), Expect = 1.1
Identities = 58/71 (81%)
Strand = Plus / Plus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagaggctg 1704
||||||||||| || ||||| | | ||| |||||| |||| || |||||||||||| |
Sbjct: 574 atcaccgaggatgacatcaaaaaattcgtcgcgaaagaggttgttttctacaagaggatc 633
Query: 1705 cacaagatctt 1715
|||||| ||||
Sbjct: 634 cacaaggtctt 644
>gb|BI956935.1|BI956935 HVSMEn0006D04f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0006D04f,
mRNA sequence
Length = 654
Score = 224 bits (113), Expect = 9e-057
Identities = 383/473 (80%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||||||||||||| | |||
Sbjct: 103 cgcatggtcatgtccggcgccgcgcccatgggcaaggagctgcaggacgccttcatggcc 162
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||| ||||| || |||||||| ||||| || ||||||||
Sbjct: 163 aagatccccaacgccgtgctcgggcaggggtacgggatgacggaggccgggccggtgctg 222
Query: 1201 tcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacg 1260
| |||||| ||||||| |||||||||||||| ||| |||||||| | |||||||||
Sbjct: 223 gccatgtgcctggcgttcgccaaggagccgttcaaggtcaagtccgggtcgtgcggcacg 282
Query: 1261 gtggtgaggaatgccgagctaaagatcatcgacccggagaccgggctgtccctccaccgc 1320
|||||| | || |||| ||| |||||| ||||||| || ||||| |||||| |||
Sbjct: 283 gtggtgcgcaacgccgggctcaagatcgtcgaccccgacaccggcgcctccctcggccgg 342
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
||||||||||| ||||| |||||| | || ||||| | |||||||| ||||| ||| ||
Sbjct: 343 aaccagcccggcgagatctgcatccgcggggagcagatcatgaaaggttaccttaacgac 402
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|| | | || ||| ||||||||| ||| || |||||||||||||||||||| ||
Sbjct: 403 ccaaaatccaccaagaacaccatcgacaaggatggctggctgcacaccggagacatcggc 462
Query: 1441 tacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtac 1500
||||||||||| ||||||||||||||| || ||| ||||||||||| |||||||||||
Sbjct: 463 atcgtcgacgacgacgacgagatcttcattgttgacaggctcaaggagatcatcaagtac 522
Query: 1501 aaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcccaccc 1553
||||| ||||| || || ||||| ||||||||||| | |||||| |||||||
Sbjct: 523 aagggcttccaggtggcgccggcaaagctcgaggccctcctcatcacccaccc 575
Score = 44.1 bits (22), Expect = 0.018
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 990 gcacggcatcacgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagc 1047
||||||||||||| | | ||| |||||| |||||||| ||||||||| | |||||||
Sbjct: 12 gcacggcatcacggtggcgcccttcgtgccgcccatcgtggtggagatcgccaagagc 69
>gb|BQ763608.1|BQ763608 EBro02_SQ008_M23_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_M23 5', mRNA sequence
Length = 590
Score = 218 bits (110), Expect = 5e-055
Identities = 329/402 (81%)
Strand = Plus / Plus
Query: 1152 cgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctctcgatgtgcat 1211
|||||||||||| ||||| || |||||||| ||||| || |||||||| | |||||| |
Sbjct: 5 cgccgtgctcgggcaggggtacgggatgacggaggccgggccggtgctggccatgtgcct 64
Query: 1212 ggcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaa 1271
|||||| |||||||||||||| ||| |||||||| | ||||||||||||||| | ||
Sbjct: 65 ggcgttcgccaaggagccgttcaaggtcaagtccgggtcgtgcggcacggtggtgcgcaa 124
Query: 1272 tgccgagctaaagatcatcgacccggagaccgggctgtccctccaccgcaaccagcccgg 1331
|||| ||| |||||| ||||||| || ||||| |||||| ||| |||||||||||
Sbjct: 125 cgccgggctcaagatcgtcgaccccgacaccggcgcctccctcggccggaaccagcccgg 184
Query: 1332 ggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaacccggaggcaac 1391
||||| |||||| | || ||||| | |||||||| ||||| ||| |||| || | ||
Sbjct: 185 cgagatctgcatccgcggggagcagatcatgaaaggttaccttaacgacccagaatccac 244
Query: 1392 ggcgaagaccatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacga 1451
||| ||||||||| ||| || |||||||||||||||||||| || |||||||||
Sbjct: 245 caagaacaccatcgacaaggatggctggctgcacaccggagacatcggcatcgtcgacga 304
Query: 1452 cggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttcca 1511
|| ||||||||||||||| || ||| ||||||||||| |||||||||||||||| |||||
Sbjct: 305 cgacgacgagatcttcattgttgacaggctcaaggagatcatcaagtacaagggcttcca 364
Query: 1512 agtcgctccggcggagctcgaggccatgctcatcgcccaccc 1553
|| || ||||| |||||||||||| | |||||| |||||||
Sbjct: 365 ggtggcgccggcagagctcgaggccctcctcatcacccaccc 406
Score = 36.2 bits (18), Expect = 4.3
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 1690 ttctacaagaggctgcacaagatcttcttc 1719
|||||||||||| | |||||| ||||||||
Sbjct: 543 ttctacaagaggatccacaaggtcttcttc 572
>gb|BQ766207.1|BQ766207 EBro08_SQ005_H07_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_H07 5', mRNA sequence
Length = 552
Score = 218 bits (110), Expect = 5e-055
Identities = 329/402 (81%)
Strand = Plus / Plus
Query: 1152 cgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctctcgatgtgcat 1211
|||||||||||| ||||| || |||||||| ||||| || |||||||| | |||||| |
Sbjct: 35 cgccgtgctcgggcaggggtacgggatgacggaggccgggccggtgctggccatgtgcct 94
Query: 1212 ggcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaa 1271
|||||| |||||||||||||| ||| |||||||| | ||||||||||||||| | ||
Sbjct: 95 ggcgttcgccaaggagccgttcaaggtcaagtccgggtcgtgcggcacggtggtgcgcaa 154
Query: 1272 tgccgagctaaagatcatcgacccggagaccgggctgtccctccaccgcaaccagcccgg 1331
|||| ||| |||||| ||||||| || ||||| |||||| ||| |||||||||||
Sbjct: 155 cgccgggctcaagatcgtcgaccccgacaccggcgcctccctcggccggaaccagcccgg 214
Query: 1332 ggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaacccggaggcaac 1391
||||| |||||| | || ||||| | |||||||| ||||| ||| |||| || | ||
Sbjct: 215 cgagatctgcatccgcggggagcagatcatgaaaggttaccttaacgacccagaatccac 274
Query: 1392 ggcgaagaccatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacga 1451
||| ||||||||| ||| || |||||||||||||||||||| || |||||||||
Sbjct: 275 caagaacaccatcgacaaggatggctggctgcacaccggagacatcggcatcgtcgacga 334
Query: 1452 cggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttcca 1511
|| ||||||||||||||| || ||| ||||||||||| |||||||||||||||| |||||
Sbjct: 335 cgacgacgagatcttcattgttgacaggctcaaggagatcatcaagtacaagggcttcca 394
Query: 1512 agtcgctccggcggagctcgaggccatgctcatcgcccaccc 1553
|| || ||||| |||||||||||| | |||||| |||||||
Sbjct: 395 ggtggcgccggcagagctcgaggccctcctcatcacccaccc 436
>gb|AL510457.1|AL510457 AL510457 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04P21u 3',
mRNA sequence
Length = 508
Score = 212 bits (107), Expect = 3e-053
Identities = 374/463 (80%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttg 1219
|||||||||| || |||||||| ||||| || |||||||| || |||||| |||||| |
Sbjct: 35 tcggacaggggtacgggatgacggaggcggggccggtgctgtccatgtgcccggcgttcg 94
Query: 1220 ccaaggagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagc 1279
||| ||||||| |||| |||||||| | ||||||||||||||| | || || ||||
Sbjct: 95 ccagggagccgacgccggccaagtccgggtcgtgcggcacggtggtgcgcaacgcggagc 154
Query: 1280 taaagatcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagattt 1339
| ||| | |||||||||| || || ||||||||| |||||||| ||||| ||||| |
Sbjct: 155 tcaaggtggtcgacccggacacgggcctgtccctcgcccgcaacctccccggcgagatct 214
Query: 1340 gcatcaggggcaagcagttgatgaaagggtacctcaacaacccggaggcaacggcgaaga 1399
||||| | ||| |||| | |||||||| ||||| || |||| | ||| || || ||
Sbjct: 215 gcatccgcggcccgcagatcatgaaaggctacctggacgaccccgtggccaccgccgcga 274
Query: 1400 ccatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgacg 1459
|||||||| ||||||||||| |||||||| ||||| || ||||||||||||| |||||
Sbjct: 275 ccatcgacgtcgaggggtggctccacaccggcgacatcggctacgtcgacgacgacgacg 334
Query: 1460 agatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctc 1519
|| |||||||||||||||| |||||||||||||||||| |||||| ||||| || | |
Sbjct: 335 aggtcttcatcgtcgaccgcgtcaaggagctcatcaagttcaagggcttccaggtgccgc 394
Query: 1520 cggcggagctcgaggccatgctcatcgcccaccccagcatcgtcgacgccgccgtcgtcc 1579
|||| ||||| ||||| |||||||||| || ||| ||||| |||||||||||||||||
Sbjct: 395 cggccgagctggaggctctgctcatcgcgcatccctccatcgccgacgccgccgtcgtcc 454
Query: 1580 aaatgaaggatgactcctgcggcgagatcccggtggcgttcgt 1622
||||||||| || ||| ||| ||||||||||||||||
Sbjct: 455 cgcaaaaggatgacgccgccggtgaggtcccggtggcgttcgt 497
>gb|BQ465081.1|BQ465081 HU02J12r HU Hordeum vulgare subsp. vulgare cDNA clone HU02J12
5-PRIME, mRNA sequence
Length = 633
Score = 202 bits (102), Expect = 3e-050
Identities = 351/434 (80%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||| || |||||| | |||
Sbjct: 197 cgcatggtcatgtccggcgccgcgcccatgggcaaggacctccaggacgccttcatggcc 256
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||||||||| || |||||||| ||||| || ||||||||
Sbjct: 257 aagatccccaacgccgtgctcggacaggggtacgggatgacggaggccgggccggtgctg 316
Query: 1201 tcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacg 1260
|| |||||| ||||||| |||||||||||||| | || ||||| || |||||||||||
Sbjct: 317 tccatgtgcctggcgttcgccaaggagccgttcgccgtcaagtcggggtcctgcggcacg 376
Query: 1261 gtggtgaggaatgccgagctaaagatcatcgacccggagaccgggctgtccctccaccgc 1320
|||||| |||| || ||||| |||||| ||||||| || ||||| |||||| ||||
Sbjct: 377 gtggtgcggaacgcggagctcaagatcgtcgaccccgacaccggcgcctccctcgcccgc 436
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
|||| ||| |||||||| |||||| | ||||||||| | |||||||| ||||| || |
Sbjct: 437 aacctgcctggggagatctgcatccgcggcaagcagatcatgaaaggttacctaaatgat 496
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|||||||| || ||| ||||| ||| ||| || ||| ||||||| |||||||| ||
Sbjct: 497 ccggaggccacaaagaacaccattgacaaggatggttggttgcacactggagacatcggt 556
Query: 1441 tacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtac 1500
|| ||||| || | ||||||||||||||||||||| ||||||| ||| | ||||| |||
Sbjct: 557 tatgtcgatgatgatgacgagatcttcatcgtcgacaggctcaaagagataatcaaatac 616
Query: 1501 aaggggttccaagt 1514
||||| ||||||||
Sbjct: 617 aagggattccaagt 630
>gb|BF623201.2|BF623201 HVSMEa0015K22f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0015K22f, mRNA sequence
Length = 817
Score = 192 bits (97), Expect = 3e-047
Identities = 365/453 (80%), Gaps = 1/453 (0%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||| || |||||| | |||
Sbjct: 140 cgcatggtcatgtccggcgccgcgcccatgggcaaggacctccaggacgccttcatggcc 199
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||||||||| || |||||||| ||||| || ||||||||
Sbjct: 200 aagatccccaacgccgtgctcggacaggggtacgggatgacggaggccgggccggtgctg 259
Query: 1201 tcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacg 1260
|| |||||| ||||||| |||||||||||||| | || ||||| || |||||||||||
Sbjct: 260 tccatgtgcctggcgttcgccaaggagccgttcgccgtcaagtcggggtcctgcggcacg 319
Query: 1261 gtggtgaggaatgccg-agctaaagatcatcgacccggagaccgggctgtccctccaccg 1319
|||||| |||| || | |||| |||||| ||||||| || ||||| |||||| |||
Sbjct: 320 gtggtgcggaacgcggaagctcaagatcgtcgaccccgacaccggcgcctccctcgcccg 379
Query: 1320 caaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaa 1379
||||| |||||||||||| |||||| | ||||||||| | |||||||| ||||| || |
Sbjct: 380 caacctgcccggggagatctgcatccgcggcaagcagatcatgaaaggttacctaaatga 439
Query: 1380 cccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattgg 1439
|||||||| || ||| |||| ||| ||| || ||| ||||||| |||||||| ||
Sbjct: 440 tccggaggccacaaagaacaccactgacaaggatggttggttgcacactggagacatcgg 499
Query: 1440 gtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagta 1499
|| ||||| || | ||||||||||||||||||||| ||||||| ||| | ||||| ||
Sbjct: 500 ttatgtcgatgatgatgacgagatcttcatcgtcgacaggctcaaagagataatcaaata 559
Query: 1500 caaggggttccaagtcgctccggcggagctcga 1532
|||||| |||||||| |||| ||||| |||||
Sbjct: 560 caagggattccaagtacctcctgcggaactcga 592
>gb|CK124865.1|CK124865 BES1824110k15 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K1510 5-PRIME, mRNA sequence
Length = 630
Score = 192 bits (97), Expect = 3e-047
Identities = 414/517 (80%), Gaps = 2/517 (0%)
Strand = Plus / Plus
Query: 1195 gtgctctcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtccggtgcctgc 1254
||||| || |||||| |||||| |||| ||||||| |||| |||||||| | |||
Sbjct: 19 gtgctgtccatgtgcccggcgttcgccagggagccgacgccggccaagtccgggtcgtgc 78
Query: 1255 ggcacggtggtgaggaatgccgagctaaagatcatcgacccggagaccgggctgtccctc 1314
|||||||||||| | || || ||||| ||| | |||||||||| || || |||||||||
Sbjct: 79 ggcacggtggtgcgcaacgcggagctcaaggtggtcgacccggacacgggcctgtccctc 138
Query: 1315 caccgcaaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctc 1374
|||||||| ||||| ||||| |||||| | ||| |||| | |||||||| |||||
Sbjct: 139 gcccgcaacctccccggcgagatctgcatccgcggcccgcagatcatgaaaggctacctg 198
Query: 1375 aacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagac 1434
|| |||| | ||| || || |||||||||| ||||||||||| |||||||| |||
Sbjct: 199 gacgaccccgtggccaccgccgcgaccatcgacgtcgaggggtggctccacaccggcgac 258
Query: 1435 attgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatc 1494
|| || ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||
Sbjct: 259 atcggctacgtcgacgacgacgacgaggtcttcatcgtcgaccgcgtcaaggagctcatc 318
Query: 1495 aagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcccacccc 1554
|||| |||||| ||||| || | ||||| ||||| ||||| |||||||||| || |||
Sbjct: 319 aagttcaagggcttccaggtgccgccggccgagctggaggctctgctcatcgcgcatccc 378
Query: 1555 agcatcgtcgacgccgccgtcgtccaaatgaaggatgactcctgcggcgagatcccggtg 1614
||||| ||||||||||||||||| ||||||||| || ||| ||| ||||||||
Sbjct: 379 tccatcgccgacgccgccgtcgtcccgcaaaaggatgacgccgccggtgaggtcccggtg 438
Query: 1615 gcgttcgtcgtg-gcgtccggcggctccgggatcaccgaggacgagatcaagcagtacgt 1673
|||||||| ||| ||| ||| || || | ||| ||||||| | |||||| ||| |||
Sbjct: 439 gcgttcgtggtgcgcg-ccgccgattctgacatcgccgaggaggccatcaaggagttcgt 497
Query: 1674 ggcgaaacaggtggtgttctacaagaggctgcacaag 1710
| || ||||||||||||||||||||||||||||||
Sbjct: 498 atccaagcaggtggtgttctacaagaggctgcacaag 534
>gb|BG344702.1|BG344702 HVSMEg0015E07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0015E07f, mRNA sequence
Length = 875
Score = 188 bits (95), Expect = 5e-046
Identities = 345/426 (80%), Gaps = 2/426 (0%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||||||||||||| | |||
Sbjct: 259 cgcatggtcatgtccggcgccgcgcccatgggcaaggagctgcaggacgccttcatggcc 318
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||| ||||| || |||||||| ||||| || ||||||||
Sbjct: 319 aagatccccaacgccgtgctcgggcaggggtacgggatgacggaggccgggccggtgctg 378
Query: 1201 tcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacg 1260
| |||||| ||||||| |||||||||||||| ||| |||||||| | |||||||||
Sbjct: 379 gccatgtgcctggcgttcgccaaggagccgttcaaggtcaagtccgggtcgtgcggcacg 438
Query: 1261 gtggtgaggaatgccgagctaaagatcatcgacccggagaccgggctgtc-cctccaccg 1319
|||||| | || |||| ||| |||||| ||||||| || ||||| | | | |||| ||
Sbjct: 439 gtggtgcgcaacgccgggctcaagatcgtcgaccccgacaccgg-cngcctcctcgggcg 497
Query: 1320 caaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaa 1379
||||||||||| ||||| |||||| | || ||||| | |||||||| ||||| ||| |
Sbjct: 498 gaaccagcccggcgagatctgcatccgcggggagcagatcatgaaaggttaccttaacga 557
Query: 1380 cccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattgg 1439
||| || | || ||| ||||||||| ||| || |||||||||||||||||||| ||
Sbjct: 558 cccagaatccaccaagaacaccatcgacaaggatggctggctgcacaccggagacatcgg 617
Query: 1440 gtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagta 1499
||||||||||| ||||||||||||||| || ||| ||||||||||| ||||||||||
Sbjct: 618 catcgtcgacgacgacgacgagatcttcattgttgacaggctcaaggagatcatcaagta 677
Query: 1500 caaggg 1505
||||||
Sbjct: 678 caaggg 683
Score = 44.1 bits (22), Expect = 0.018
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 990 gcacggcatcacgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagc 1047
||||||||||||| | | ||| |||||| |||||||| ||||||||| | |||||||
Sbjct: 168 gcacggcatcacggtggcgcccttcgtgccgcccatcgtggtggagatcgccaagagc 225
>gb|AL507037.1|AL507037 AL507037 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04P21T 5',
mRNA sequence
Length = 700
Score = 139 bits (70), Expect = 4e-031
Identities = 248/303 (81%), Gaps = 4/303 (1%)
Strand = Plus / Minus
Query: 1411 gaggggtggctgcacaccggagacattgggtacgtcgacgacggcg-acga-gatcttca 1468
||||||||||| |||||||| ||||| || ||||||||||||| || |||| | |||| |
Sbjct: 677 gaggggtggctccacaccggcgacatcggntacgtcgacgacgacggacgaaggtcttna 618
Query: 1469 tcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagc 1528
|||||||||| |||||||||||||||||| |||||| ||||| || | ||||| ||||
Sbjct: 617 tcgtcgaccgcgtcaaggagctcatcaagttcaagggcttccaggtgccgccggccgagc 558
Query: 1529 tcgaggccatgctcatcgcccaccccagcatcgtcgacgccgccgtcgtccaaatgaagg 1588
| ||||| |||||||||| || ||| ||||| ||||||||||||||||| ||||
Sbjct: 557 tggaggctntgctcatcgcgcatccctccatcgccgacgccgccgtcgtcccgcaaaagg 498
Query: 1589 atgactcctgcggcgagatcccggtggcgttcgtcgtg-gcgtccggcggctccgggatc 1647
||||| || ||| ||| |||||||||||||||| ||| ||| ||| || || | |||
Sbjct: 497 atgacgccgccggtgaggtcccggtggcgttcgtggtgcgcg-ccgccgattctgacatc 439
Query: 1648 accgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagaggctgcac 1707
||||||| | |||||| ||| ||| | || |||||||||||||||||||||||||||
Sbjct: 438 gccgaggaggccatcaaggagttcgtatccaagcaggtggtgttctacaagaggctgcac 379
Query: 1708 aag 1710
|||
Sbjct: 378 aag 376
>gb|BF253382.2|BF253382 HVSMEf0001A07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0001A07f, mRNA sequence
Length = 864
Score = 137 bits (69), Expect = 2e-030
Identities = 237/293 (80%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||| || |||||| | |||
Sbjct: 143 cgcatggtcatgtccggcgccgcgcccatgggcaaggacctccaggacgccttcatggcc 202
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||||||||| || |||||||| ||||| || ||||||||
Sbjct: 203 aagatccccaacgccgtgctcggacaggggtacgggatgacggaggccgggccggtgctg 262
Query: 1201 tcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacg 1260
|| |||||| ||||||| |||||||||||||| | || ||||| || |||||||||||
Sbjct: 263 tccatgtgcctggcgttcgccaaggagccgttcgccgtcaagtcggggtcctgcggcacg 322
Query: 1261 gtggtgaggaatgccgagctaaagatcatcgacccggagaccgggctgtccctccaccgc 1320
|||||| |||| || ||||| |||||| | |||| || ||||| | |||| ||||
Sbjct: 323 gtggtgcggaacgcggagctcaagatcgacaaccccgacaccggcgcctacctcgcccgc 382
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacct 1373
|||| |||||||||||| |||||| | ||||||||| | |||||||| |||||
Sbjct: 383 aacctgcccggggagatctgcatccgcggcaagcagatcatgaaaggttacct 435
>gb|BE213865.1|BE213865 HV_CEb0001H21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001H21f, mRNA sequence
Length = 922
Score = 133 bits (67), Expect = 2e-029
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| || |||||||||||||||||||| || ||||||||||| ||||
Sbjct: 88 accatcgacaaggatggctggctgcacaccggagacatcggcatcgtcgacgacgacgac 147
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
||||||||||| || ||| ||||||||||| |||| ||||||||||| ||||| || ||
Sbjct: 148 gagatcttcattgttgacaggctcaaggagatcatgaagtacaagggcttccaggtggcg 207
Query: 1519 ccggcggagctcgaggccatgctcatcgcccaccc 1553
||||| |||||||||||| | |||||| |||||||
Sbjct: 208 ccggcagagctcgaggccctcctcatcacccaccc 242
Score = 36.2 bits (18), Expect = 4.3
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 1690 ttctacaagaggctgcacaagatcttcttc 1719
|||||||||||| | |||||| ||||||||
Sbjct: 379 ttctacaagaggatccacaaggtcttcttc 408
>gb|CK123691.1|CK123691 BES1824105b17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B175 5-PRIME, mRNA sequence
Length = 801
Score = 131 bits (66), Expect = 1e-028
Identities = 238/294 (80%), Gaps = 1/294 (0%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||| || |||||| | |||
Sbjct: 449 cgcatggtcatgtccggcgccgcgcccatgggcaaggacctccaggacgccttcatggcc 508
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||||||||| || |||||||| ||||| || ||||||||
Sbjct: 509 aagatccccaacgccgtgctcggacaggggtacgggatgacggaggccgggccggtgctg 568
Query: 1201 tcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcac- 1259
|| |||||| ||||||| |||||||||||||| | || ||||| || ||||||||||
Sbjct: 569 tccatgtgcctggcgttcgccaaggagccgttcgccgtcaagtcggggtcctgcggcacg 628
Query: 1260 ggtggtgaggaatgccgagctaaagatcatcgacccggagaccgggctgtccctccaccg 1319
||||||| |||| || ||||| |||||| ||||||| || ||||| |||||| |||
Sbjct: 629 ggtggtgcggaacgcggagctcaagatcgtcgaccccgacaccggcgcctccctcgcccg 688
Query: 1320 caaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacct 1373
|||| ||| |||||||| |||||| | ||||||||| | |||||||| |||||
Sbjct: 689 caactggcctggggagatctgcatccgcggcaagcagatcatgaaaggttacct 742
Score = 73.8 bits (37), Expect = 2e-011
Identities = 145/181 (80%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| || || || |||||||||||||| ||||| || |||||||| || ||||
Sbjct: 84 acgacgtggtggccctcccctactcgtccggcaccacgggcctccccaagggcgtcatgc 143
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacc 835
| | ||||| | || || |||||||| || |||| || ||||| || |||||||||
Sbjct: 144 tcacccaccgcagcctcgtcaccagcgtcgcccagcaggtggacggggagaacccgaact 203
Query: 836 tccacttccgggaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgc 895
| ||||| ||||||| ||||| || || ||||||||||| |||||||| | |||||||
Sbjct: 204 tgtacttcggggaggaggacgtggtgctgtgcgtgctgccgctgttccacatctactcgc 263
Query: 896 t 896
|
Sbjct: 264 t 264
>gb|BI959998.1|BI959998 HVSMEn0022N01f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0022N01f,
mRNA sequence
Length = 629
Score = 111 bits (56), Expect = 9e-023
Identities = 182/224 (81%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||||||||||||| | |||
Sbjct: 268 cgcatggtcatgtccggcgccgcgcccatgggcaaggagctgcaggacgccttcatggcc 327
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||| ||||| || |||||||| ||||| || ||||||||
Sbjct: 328 aagatccccaacgccgtgctcgggcaggggtacgggatgacggaggccgggccggtgctg 387
Query: 1201 tcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacg 1260
| |||||| ||||||| |||||||||||||| ||| |||||||| | |||||||||
Sbjct: 388 gccatgtgcctggcgttcgccaaggagccgttcaaggtcaagtccgggtcgtgcggcacg 447
Query: 1261 gtggtgaggaatgccgagctaaagatcatcgacccggagaccgg 1304
|||||| | || ||| ||| |||||| ||||||| || |||||
Sbjct: 448 gtggtgcgcaacgcccggctcaagatcgtcgaccccgacaccgg 491
Score = 44.1 bits (22), Expect = 0.018
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 990 gcacggcatcacgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagc 1047
||||||||||||| | | ||| |||||| |||||||| ||||||||| | |||||||
Sbjct: 177 gcacggcatcacggtggcgcccttcgtgccgcccatcgtggtggagatcgccaagagc 234
>gb|BE193837.3|BE193837 HVSMEh0082K14f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0082K14f, mRNA sequence
Length = 803
Score = 111 bits (56), Expect = 9e-023
Identities = 182/224 (81%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||||||||||||| | |||
Sbjct: 23 cgcatggtcatgtccggcgccgcgcccatgggcaaggagctgcaggacgccttcatggcc 82
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||| ||||| || |||||||| ||||| || ||||||||
Sbjct: 83 aagatccccaacgccgtgctcgggcaggggtacgggatgacggaggccgggccggtgctg 142
Query: 1201 tcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacg 1260
| |||||| ||||||| |||||||||||||| ||| |||||||| | |||||||||
Sbjct: 143 gccatgtgcctggcgttcgccaaggagccgttcaaggtcaagtccgggtcgtgcggcacg 202
Query: 1261 gtggtgaggaatgccgagctaaagatcatcgacccggagaccgg 1304
|||||| | || |||| ||| |||||| | ||||| || |||||
Sbjct: 203 gtggtgcgcaacgccgggctcaagatcgtagaccccgacaccgg 246
>gb|BI959839.1|BI959839 HVSMEn0021P10f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0021P10f,
mRNA sequence
Length = 657
Score = 101 bits (51), Expect = 9e-020
Identities = 83/94 (88%)
Strand = Plus / Minus
Query: 1443 cgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtacaa 1502
||||||||||| ||||||||||||||| || ||| ||||||||||| |||||||||||||
Sbjct: 653 cgtcgacgacgacgacgagatcttcattgttgacaggctcaaggagatcatcaagtacaa 594
Query: 1503 ggggttccaagtcgctccggcggagctcgaggcc 1536
||| ||||| || || ||||| ||||| ||||||
Sbjct: 593 gggcttccaggtggcgccggcagagctngaggcc 560
Score = 38.2 bits (19), Expect = 1.1
Identities = 61/75 (81%)
Strand = Plus / Minus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagaggctg 1704
||||||||||| || ||||| | | ||| ||||| |||| || |||||||||||| |
Sbjct: 450 atcaccgaggatgacatcaaaaaattcgtcgcgaaggaggttgttttctacaagaggatc 391
Query: 1705 cacaagatcttcttc 1719
|||||| ||||||||
Sbjct: 390 cacaaggtcttcttc 376
>gb|BE411374.1|BE411374 ISC004.H10F990609 ITEC ISC Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone ISC004.H10, mRNA sequence
Length = 492
Score = 95.6 bits (48), Expect = 5e-018
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||| || |||||| | |||
Sbjct: 184 cgcatggtcatgtccggcgccgcgcccatgggcaaggacctccaggacgccttcatggcc 243
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||||||||| || |||||||| ||||| || ||||||||
Sbjct: 244 aagatccccaacgccgtgctcggacaggggtacgggatgacggaggccgggccggtgctg 303
Query: 1201 tcgatgtgcatggcgtttgccaaggagccgtt 1232
|| |||||| ||||||| ||||||||||||||
Sbjct: 304 tccatgtgcctggcgttcgccaaggagccgtt 335
>gb|AV833853.1|AV833853 AV833853 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp. vulgare
cDNA clone bags8m01, mRNA sequence
Length = 599
Score = 91.7 bits (46), Expect = 8e-017
Identities = 119/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 1417 tggctgcacaccgg-agacattgggtacgtcgacgacggcgacgag-atcttcatcgtcg 1474
|||||||||||||| | |||| || ||||||||||| ||||||| |||||||| || |
Sbjct: 23 tggctgcacaccggnanacatcggcatcgtcgacgacgacgacgagnatcttcattgttg 82
Query: 1475 accggctcaaggagctcatcaagtacaaggggttccaagtcgctccggc-ggagctcgag 1533
|| ||||||||||| |||||||||||||||| ||||| || || ||||| | ||||||||
Sbjct: 83 acaggctcaaggagatcatcaagtacaagggcttccaggtggcgccggcagnagctcgag 142
Query: 1534 gccatgctcatcgcccaccc 1553
||| | |||||| |||||||
Sbjct: 143 gccctcctcatcacccaccc 162
Score = 38.2 bits (19), Expect = 1.1
Identities = 61/75 (81%)
Strand = Plus / Plus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagaggctg 1704
||||||||||| || ||||| | | ||| ||||| |||| || |||||||||||| |
Sbjct: 255 atcaccgaggatgacatcaaaaaattcgtcgcgaaggaggttgttttctacaagaggatc 314
Query: 1705 cacaagatcttcttc 1719
|||||| ||||||||
Sbjct: 315 cacaaggtcttcttc 329
>gb|BE411643.1|BE411643 ISC007.G04F990714 ITEC ISC Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone ISC007.G04, mRNA sequence
Length = 494
Score = 79.8 bits (40), Expect = 3e-013
Identities = 125/152 (82%), Gaps = 1/152 (0%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||| || |||||| | |||
Sbjct: 182 cgcatggtcatgtccggcgccgcgcccatgggcaaggacctccaggacgccttcatggcc 241
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||||||||| || |||||||| ||||| || ||||||||
Sbjct: 242 aagatccccaacgccgtgctcggacaggggtacgggatgacggaggccgggccggtgctg 301
Query: 1201 tcgatgtgcatggcgtttgccaaggagccgtt 1232
|| |||||| ||||||| | ||||||||||||
Sbjct: 302 tccatgtgcctggcgttcg-caaggagccgtt 332
>gb|CB882386.1|CB882386 HL01L15w HL Hordeum vulgare subsp. vulgare cDNA clone HL01L15
3-PRIME, mRNA sequence
Length = 490
Score = 79.8 bits (40), Expect = 3e-013
Identities = 94/112 (83%)
Strand = Plus / Plus
Query: 1421 tgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggc 1480
||||||| |||||||| || || ||||| || | ||||||||||||||||||||| |||
Sbjct: 17 tgcacactggagacatcggttatgtcgatgatgatgacgagatcttcatcgtcgacaggc 76
Query: 1481 tcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagctcga 1532
|||| ||| | ||||| |||||||| |||||||| |||| ||||| |||||
Sbjct: 77 tcaaagagataatcaaatacaagggattccaagtacctcctgcggaactcga 128
Score = 42.1 bits (21), Expect = 0.069
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 1745 ccggcaagattttaaggaaggatctgagagcaaagct 1781
|||||||||| | |||||||| ||||||||||||||
Sbjct: 341 ccggcaagatcctcaggaaggacctgagagcaaagct 377
>gb|BF064640.2|BF064640 HV_CEb0016I15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016I15f, mRNA sequence
Length = 590
Score = 75.8 bits (38), Expect = 5e-012
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 464 tcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
||||||||| ||||| ||| |||||||||||| ||||||||| ||||||||||||||||
Sbjct: 399 tcggcgccgtcgccagcaccgccaacccgctctacaccccgcgggagatcgccaagcagg 458
Query: 524 cg 525
||
Sbjct: 459 cg 460
>gb|BF260187.2|BF260187 HVSMEf0021F10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021F10f, mRNA sequence
Length = 859
Score = 73.8 bits (37), Expect = 2e-011
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 1152 cgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctctcgatgtgcat 1211
||||||||| |||||||| || |||||||| |||| || |||||||| || |||||| |
Sbjct: 220 cgccgtgcttggacaggggtacgggatgacggagggcgggccggtgctgtccatgtgcct 279
Query: 1212 ggcgtttgccaaggagccgtt 1232
|||||| ||||||||||||||
Sbjct: 280 ggcgttcgccaaggagccgtt 300
Score = 56.0 bits (28), Expect = 5e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggac 1128
||||||||||| || || |||||||||||||||||||| || ||||||
Sbjct: 149 cgcatggtcatgtccggcgccgcgcccatgggcaaggaccttcaggac 196
>gb|BE519742.1|BE519742 HV_CEb0021A20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021A20f, mRNA sequence
Length = 726
Score = 73.8 bits (37), Expect = 2e-011
Identities = 145/181 (80%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
||||||| ||||||||||| ||||| |||||||| || |||||||||||||| || ||||
Sbjct: 399 acgacgtcgtcgcgctgccatactcctccggcaccaccgggctgcccaagggcgtcatgc 458
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacc 835
| ||||||| | || | |||||||| || |||| || ||||| || ||||||||||
Sbjct: 459 tcacgcaccgcagcctcatcaccagcgtcgcacagcaggtggacggagagaacccgaacc 518
Query: 836 tccacttccgggaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgc 895
| ||||| || |||| ||||| | || ||| ||||||| |||||||| | |||||||
Sbjct: 519 tgtacttcaggaaggaggacgtgctgctgtgcctgctgccgctgttccacatctactcgc 578
Query: 896 t 896
|
Sbjct: 579 t 579
Score = 63.9 bits (32), Expect = 2e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 458 cccgcctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatc 513
||||||||||||||||| ||||||| |||||||| || ||||||||| |||||||
Sbjct: 147 cccgcctcggcgccgccaccaccaccgccaaccccttctacaccccgcacgagatc 202
>gb|CA012845.1|CA012845 HT06J23r HT Hordeum vulgare subsp. vulgare cDNA clone HT06J23
5-PRIME, mRNA sequence
Length = 684
Score = 73.8 bits (37), Expect = 2e-011
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggacctgctgcgcgcc 1140
||||||||||| || || |||||||||||||||||||| || |||||| | |||
Sbjct: 546 cgcatggtcatgtccggcgccgcgcccatgggcaaggacctccaggacgccttcatggcc 605
Query: 1141 aagctccctcgcgccgtgctcggacagggttatgggatgacagaggcaggcccggtgctc 1200
||| |||| |||||||||||||||||| || |||||||| ||||| || ||||||||
Sbjct: 606 aagatccccaacgccgtgctcggacaggggtacgggatgacggaggccgggccggtgctg 665
Query: 1201 tcgatgtgcatggcgtt 1217
|| |||||| |||||||
Sbjct: 666 tccatgtgcctggcgtt 682
Score = 65.9 bits (33), Expect = 5e-009
Identities = 145/181 (80%), Gaps = 1/181 (0%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| || || || |||||||||||||| ||||| || |||||||| || ||||
Sbjct: 182 acgacgtggtggccctcccctactcgtccggcaccacgggcctccccaagggcgtcatgc 241
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacc 835
| | ||||| | || || |||||||| || |||| || ||||| || |||||||| |
Sbjct: 242 tcacccaccgcagcctcgtcaccagcgtcgcccagcaggtggacggggagaacccgaa-c 300
Query: 836 tccacttccgggaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgc 895
| ||||| ||||||| ||||| || || ||||||||||| |||||||| | |||||||
Sbjct: 301 tgtacttcggggaggaggacgtggtgctgtgcgtgctgccgctgttccacatctactcgc 360
Query: 896 t 896
|
Sbjct: 361 t 361
>gb|BI958356.1|BI958356 HVSMEn0014I24f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0014I24f,
mRNA sequence
Length = 666
Score = 71.9 bits (36), Expect = 8e-011
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcaggac 1128
||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 509 cgcatggtcatgtccggcgccgcgcccatgggcaaggagctgcaggac 556
Score = 65.9 bits (33), Expect = 5e-009
Identities = 144/181 (79%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
||||||| ||||||||||| ||||| |||||||| | |||||||||||||| || ||||
Sbjct: 144 acgacgtcgtcgcgctgccatactcctccggcaccgccgggctgcccaagggcgtcatgc 203
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacc 835
| ||||||| | || | |||||||| || |||| || ||||| || ||||||||||
Sbjct: 204 tcacgcaccgcagcctcatcaccagcgtcgcacagcaggtggacggagagaacccgaacc 263
Query: 836 tccacttccgggaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgc 895
| ||||| || |||| ||||| | || ||| ||||||| |||||||| | |||||||
Sbjct: 264 tgtacttcaggaaggaggacgtgctgctgtgcctgctgccgctgttccacatctactcgc 323
Query: 896 t 896
|
Sbjct: 324 t 324
Score = 44.1 bits (22), Expect = 0.018
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 990 gcacggcatcacgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagc 1047
||||||||||||| | | ||| |||||| |||||||| ||||||||| | |||||||
Sbjct: 418 gcacggcatcacggtggcgcccttcgtgccgcccatcgtggtggagatcgccaagagc 475
>gb|BE195071.1|BE195071 HVSMEh0088D12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088D12f, mRNA sequence
Length = 639
Score = 63.9 bits (32), Expect = 2e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 458 cccgcctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatc 513
||||||||||||||||| ||||||| |||||||| || ||||||||| |||||||
Sbjct: 100 cccgcctcggcgccgccaccaccaccgccaaccccttctacaccccgcacgagatc 155
Score = 60.0 bits (30), Expect = 3e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
||||||| ||||||||||| ||||| |||||||| || |||||| ||||||| || ||||
Sbjct: 352 acgacgtcgtcgcgctgccatactcctccggcaccaccgggctggccaagggcgtcatgc 411
Query: 776 tgtcgcaccg 785
| |||||||
Sbjct: 412 tcacgcaccg 421
>gb|CA018957.1|CA018957 HV10D20r HV Hordeum vulgare subsp. vulgare cDNA clone HV10D20
5-PRIME, mRNA sequence
Length = 485
Score = 58.0 bits (29), Expect = 1e-006
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 463 ctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagcag 522
|||||||||| || |||||| |||||||||||| ||||| | ||||| |||||||||||
Sbjct: 133 ctcggcgccgtcgtcaccaccgccaacccgctcaacaccgccgccgaggtcgccaagcag 192
Query: 523 g 523
|
Sbjct: 193 g 193
>gb|CA023903.1|CA023903 HZ47M06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47M06
5-PRIME, mRNA sequence
Length = 370
Score = 56.0 bits (28), Expect = 5e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 458 cccgcctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatc 513
|||| |||||||||||| ||||||||||||||||| || ||| |||| |||||||
Sbjct: 185 cccggctcggcgccgccaccaccacggccaacccgttctgcacgccgcacgagatc 240
>gb|BF623616.2|BF623616 HVSMEa0003A08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0003A08f, mRNA sequence
Length = 484
Score = 48.1 bits (24), Expect = 0.001
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 458 cccgcctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatc 513
|||| ||||| |||||| ||||||||||||||||| || ||| |||| |||||||
Sbjct: 383 cccggctcggtgccgccaccaccacggccaacccgttctgcacgccgcacgagatc 438
>gb|BF621660.1|BF621660 HVSMEa0011M07f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011M07f, mRNA sequence
Length = 838
Score = 44.1 bits (22), Expect = 0.018
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 207 gcttccggacatcgccatcccggaccacct 236
|||||||||||||| ||||||| |||||||
Sbjct: 189 gcttccggacatcgacatcccgaaccacct 218
>gb|BI958740.1|BI958740 HVSMEn0016G16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016G16f, mRNA sequence
Length = 690
Score = 44.1 bits (22), Expect = 0.018
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 522 ggcggcggcctccggcgccaccgtcg 547
||||||||||||||||||||| ||||
Sbjct: 134 ggcggcggcctccggcgccacggtcg 109
>gb|BE214832.3|BE214832 HV_CEb0004M14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0004M14f, mRNA sequence
Length = 272
Score = 44.1 bits (22), Expect = 0.018
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 522 ggcggcggcctccggcgccaccgtcg 547
||||||||||||||||||||| ||||
Sbjct: 119 ggcggcggcctccggcgccacggtcg 94
>gb|BM442012.2|BM442012 EBan01_SQ001_L04_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ001_L04 5', mRNA sequence
Length = 343
Score = 44.1 bits (22), Expect = 0.018
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1626 ggcgtccggcggctccgggatc 1647
||||||||||||||||||||||
Sbjct: 243 ggcgtccggcggctccgggatc 264
>gb|BQ764372.1|BQ764372 EBan01_SQ005_M13_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_M13 5', mRNA sequence
Length = 361
Score = 44.1 bits (22), Expect = 0.018
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1626 ggcgtccggcggctccgggatc 1647
||||||||||||||||||||||
Sbjct: 253 ggcgtccggcggctccgggatc 274
>gb|BU996807.1|BU996807 HM14N06r HM Hordeum vulgare subsp. vulgare cDNA clone HM14N06
5-PRIME, mRNA sequence
Length = 491
Score = 44.1 bits (22), Expect = 0.018
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1626 ggcgtccggcggctccgggatc 1647
||||||||||||||||||||||
Sbjct: 280 ggcgtccggcggctccgggatc 301
>gb|BI954261.1|BI954261 HVSMEm0016O05f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0016O05f, mRNA sequence
Length = 666
Score = 42.1 bits (21), Expect = 0.069
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 523 gcggcggcctccggcgccaccgtcg 547
||||||||| |||||||||||||||
Sbjct: 165 gcggcggccgccggcgccaccgtcg 189
>gb|BF064783.2|BF064783 HV_CEb0019C15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0019C15f, mRNA sequence
Length = 597
Score = 42.1 bits (21), Expect = 0.069
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 523 gcggcggcctccggcgccaccgtcg 547
||||||||| |||||||||||||||
Sbjct: 488 gcggcggccgccggcgccaccgtcg 512
>gb|BF627337.3|BF627337 HVSMEb0004J13f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0004J13f, mRNA sequence
Length = 792
Score = 42.1 bits (21), Expect = 0.069
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1116 ggagctgcaggacctgctgcg 1136
|||||||||||||||||||||
Sbjct: 351 ggagctgcaggacctgctgcg 371
>gb|BF265731.3|BF265731 HV_CEa0013C24f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013C24f, mRNA sequence
Length = 765
Score = 42.1 bits (21), Expect = 0.069
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 523 gcggcggcctccggcgccaccgtcg 547
||||||||| |||||||||||||||
Sbjct: 391 gcggcggccgccggcgccaccgtcg 415
>gb|BF267399.2|BF267399 HV_CEa0017N02f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0017N02f, mRNA sequence
Length = 526
Score = 40.1 bits (20), Expect = 0.27
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 523 gcggcggcctccggcgccaccgtc 546
||||||||| ||||||||||||||
Sbjct: 353 gcggcggccgccggcgccaccgtc 376
>gb|BI958629.1|BI958629 HVSMEn0016A02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016A02f, mRNA sequence
Length = 672
Score = 40.1 bits (20), Expect = 0.27
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 463 ctcggcgccgccgccaccac 482
||||||||||||||||||||
Sbjct: 1 ctcggcgccgccgccaccac 20
>gb|BM368135.2|BM368135 EBed01_SQ002_E11_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_E11 5', mRNA sequence
Length = 443
Score = 40.1 bits (20), Expect = 0.27
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 581 gggggctcgccggcgtcgcc 600
||||||||||||||||||||
Sbjct: 163 gggggctcgccggcgtcgcc 144
>gb|BI779236.2|BI779236 EBro01_SQ003_G14_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_G14 5', mRNA sequence
Length = 483
Score = 40.1 bits (20), Expect = 0.27
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1438 gggtacgtcgacgacggcga 1457
||||||||||||||||||||
Sbjct: 237 gggtacgtcgacgacggcga 256
>gb|AU090088.1|AU090088 AU090088 Hordeum vulgare subsp. vulgare Upper three leaves at
heading stage Hordeum vulgare subsp. vulgare cDNA clone
haruna_lib1_061, mRNA sequence
Length = 471
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 585 gctcgccggcgtcgccgtcgtcg 607
|||||||| ||||||||||||||
Sbjct: 127 gctcgccgtcgtcgccgtcgtcg 149
>gb|AU090112.1|AU090112 AU090112 Hordeum vulgare subsp. vulgare Upper three leaves at
heading stage Hordeum vulgare subsp. vulgare cDNA clone
haruna_lib1_093, mRNA sequence
Length = 452
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 585 gctcgccggcgtcgccgtcgtcg 607
|||||||| ||||||||||||||
Sbjct: 127 gctcgccgtcgtcgccgtcgtcg 149
>gb|AL506647.1|AL506647 AL506647 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03N04T 5',
mRNA sequence
Length = 700
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 185 cgccggcgtcgccgtcgtc 203
>gb|AL507042.1|AL507042 AL507042 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05A10T 5',
mRNA sequence
Length = 553
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 101 cgccggcgtcgccgtcgtc 119
>gb|AL508817.1|AL508817 AL508817 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09O07V 5',
mRNA sequence
Length = 465
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 99 cgccgccgccaccacggcc 81
>gb|BF622477.2|BF622477 HVSMEa0004I05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004I05f, mRNA sequence
Length = 480
Score = 38.2 bits (19), Expect = 1.1
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 447 cctcgcgtgctcccgcctcggcgccgccgcc 477
|||||| ||||||| |||| |||||||||||
Sbjct: 9 cctcgcctgctcccccctccgcgccgccgcc 39
>gb|BF625782.2|BF625782 HVSMEa0013J11f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0013J11f, mRNA sequence
Length = 481
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1560 cgtcgacgccgccgtcgtc 1578
|||||||||||||||||||
Sbjct: 261 cgtcgacgccgccgtcgtc 243
>gb|BF253700.1|BF253700 HVSMEf0001O04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001O04f, mRNA sequence
Length = 800
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 378 cgccgccgccaccacggcc 360
>gb|BF629748.2|BF629748 HVSMEb0013K20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0013K20f, mRNA sequence
Length = 779
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 688 gaggcggcggcggccatcg 706
|||||||||||||||||||
Sbjct: 141 gaggcggcggcggccatcg 123
>gb|BF256377.2|BF256377 HVSMEf0009G22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0009G22f, mRNA sequence
Length = 780
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 119 cgccgccgccaccacggcc 101
>gb|BG343049.1|BG343049 HVSMEg0001N14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001N14f, mRNA sequence
Length = 787
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 531 ctccggcgccaccgtcgtcatca 553
||||||||||||||||| |||||
Sbjct: 253 ctccggcgccaccgtcgccatca 275
>gb|BG344416.1|BG344416 HVSMEg0009D08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009D08f, mRNA sequence
Length = 806
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 374 cgccgccgccaccacggcc 356
>gb|BI953021.1|BI953021 HVSMEm0009E21f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0009E21f, mRNA sequence
Length = 528
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 585 gctcgccggcgtcgccgtcgtcg 607
|||||||| ||||||||||||||
Sbjct: 84 gctcgccgtcgtcgccgtcgtcg 106
>gb|BI953298.1|BI953298 HVSMEm0012B09f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0012B09f, mRNA sequence
Length = 886
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 594 cgtcgccgtcgtcgccacg 612
|||||||||||||||||||
Sbjct: 109 cgtcgccgtcgtcgccacg 91
>gb|BI956628.1|BI956628 HVSMEn0004G20f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0004G20f,
mRNA sequence
Length = 909
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1449 cgacggcgacgagatcttc 1467
|||||||||||||||||||
Sbjct: 437 cgacggcgacgagatcttc 455
>gb|BE215242.1|BE215242 HV_CEb0006E05f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006E05f, mRNA sequence
Length = 678
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1442 acgtcgacgacggcgacga 1460
|||||||||||||||||||
Sbjct: 516 acgtcgacgacggcgacga 534
>gb|BG417061.1|BG417061 HVSMEk0016B06f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0016B06f, mRNA sequence
Length = 480
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 584 ggctcgccggcgtcgccgtcgtc 606
|||||||||||| ||||||||||
Sbjct: 42 ggctcgccggcgccgccgtcgtc 20
>gb|BF627549.3|BF627549 HVSMEb0005C12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005C12f, mRNA sequence
Length = 697
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 181 cgccggcgtcgccgtcgtc 199
>gb|BF629016.3|BF629016 HVSMEb0009I20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009I20f, mRNA sequence
Length = 827
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 688 gaggcggcggcggccatcg 706
|||||||||||||||||||
Sbjct: 111 gaggcggcggcggccatcg 93
>gb|BG300900.2|BG300900 HVSMEb0018O02f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0018O02f, mRNA sequence
Length = 774
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1449 cgacggcgacgagatcttc 1467
|||||||||||||||||||
Sbjct: 434 cgacggcgacgagatcttc 452
>gb|BE195860.3|BE195860 HVSMEh0090K20f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090K20f, mRNA sequence
Length = 513
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 179 cgccggcgtcgccgtcgtc 197
>gb|BE196297.3|BE196297 HVSMEh0091O17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091O17f, mRNA sequence
Length = 671
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 264 cgccgccgccaccacggcc 246
>gb|BG365747.2|BG365747 HVSMEi0004A16f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004A16f, mRNA sequence
Length = 481
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 155 cgccggcgtcgccgtcgtc 173
>gb|BF261803.3|BF261803 HV_CEa0002E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002E08f, mRNA sequence
Length = 850
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 523 gcggcggcctccggcgccaccgt 545
||||||||| |||||||||||||
Sbjct: 268 gcggcggccgccggcgccaccgt 290
>gb|BF265398.3|BF265398 HV_CEa0012C06f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0012C06f, mRNA sequence
Length = 598
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 585 gctcgccggcgtcgccgtcgtcg 607
|||||||| ||||||||||||||
Sbjct: 101 gctcgccgtcgtcgccgtcgtcg 123
>gb|BF267276.3|BF267276 HV_CEa0017H05f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0017H05f, mRNA sequence
Length = 884
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 688 gaggcggcggcggccatcg 706
|||||||||||||||||||
Sbjct: 99 gaggcggcggcggccatcg 81
>gb|AV916388.1|AV916388 AV916388 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17a06 5', mRNA sequence
Length = 668
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 209 cgccggcgtcgccgtcgtc 227
>gb|BM816288.1|BM816288 HB03E10_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB03E10_T3.ab1 similar to 4-alpha-glucanotransferase,,
mRNA sequence
Length = 833
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 187 cgccggcgtcgccgtcgtc 205
>gb|BQ460575.1|BQ460575 HA06I19r HA Hordeum vulgare subsp. vulgare cDNA clone HA06I19
5-PRIME, mRNA sequence
Length = 341
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 128 cgccgccgccaccacggcc 110
>gb|BQ461073.1|BQ461073 HE01E18r HE Hordeum vulgare subsp. vulgare cDNA clone HE01E18
5-PRIME, mRNA sequence
Length = 509
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 523 gcggcggcctccggcgccaccgt 545
||||||||| |||||||||||||
Sbjct: 99 gcggcggccgccggcgccaccgt 121
>gb|BQ466657.1|BQ466657 HS01C22T HS Hordeum vulgare subsp. vulgare cDNA clone HS01C22
5-PRIME, mRNA sequence
Length = 682
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 108 cgccggcgtcgccgtcgtc 126
>gb|BQ466979.1|BQ466979 HS02C22r HS Hordeum vulgare subsp. vulgare cDNA clone HS02C22
5-PRIME, mRNA sequence
Length = 541
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 108 cgccggcgtcgccgtcgtc 126
>gb|BQ467605.1|BQ467605 HS04F02r HS Hordeum vulgare subsp. vulgare cDNA clone HS04F02
5-PRIME, mRNA sequence
Length = 459
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 109 cgccgccgccaccacggcc 91
>gb|BQ468485.1|BQ468485 HM01G09T HM Hordeum vulgare subsp. vulgare cDNA clone HM01G09
5-PRIME, mRNA sequence
Length = 422
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 89 cgccgccgccaccacggcc 71
>gb|BQ471593.1|BQ471593 HV02O07r HV Hordeum vulgare subsp. vulgare cDNA clone HV02O07
5-PRIME, mRNA sequence
Length = 594
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 174 cgccggcgtcgccgtcgtc 192
>gb|BQ660193.1|BQ660193 HI01G10w HI Hordeum vulgare subsp. vulgare cDNA clone HI01G10
3-PRIME, mRNA sequence
Length = 521
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 369 cgccgccgccaccacggcc 387
>gb|BQ660387.1|BQ660387 HI02D23u HI Hordeum vulgare subsp. vulgare cDNA clone HI02D23
3-PRIME, mRNA sequence
Length = 475
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 377 cgccgccgccaccacggcc 395
>gb|BQ665138.1|BQ665138 HX02E09u HX Hordeum vulgare subsp. vulgare cDNA clone HX02E09
3-PRIME, mRNA sequence
Length = 442
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 377 cgccgccgccaccacggcc 395
>gb|BQ665452.1|BQ665452 HX03K16u HX Hordeum vulgare subsp. vulgare cDNA clone HX03K16
3-PRIME, mRNA sequence
Length = 464
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 357 cgccgccgccaccacggcc 375
>gb|BM377469.2|BM377469 EBem04_SQ003_D17_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_D17 5', mRNA sequence
Length = 466
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 358 cgccgccgccaccacggcc 376
>gb|BM368689.2|BM368689 EBem08_SQ004_F08_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ004_F08 5', mRNA sequence
Length = 373
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 265 cgccgccgccaccacggcc 283
>gb|BM099865.2|BM099865 EBes01_SQ004_H24_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_H24 5', mRNA sequence
Length = 355
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 168 cgccggcgtcgccgtcgtc 186
>gb|BM096497.2|BM096497 EBma03_SQ001_O01_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ001_O01 5', mRNA sequence
Length = 422
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 42 cgccgccgccaccacggcc 24
>gb|BM373327.2|BM373327 EBma04_SQ004_A13_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ004_A13 5', mRNA sequence
Length = 672
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 688 gaggcggcggcggccatcg 706
|||||||||||||||||||
Sbjct: 95 gaggcggcggcggccatcg 77
>gb|BM098220.2|BM098220 EBpi03_SQ002_O06_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_O06 5', mRNA sequence
Length = 457
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 83 cgccgccgccaccacggcc 65
>gb|BM443588.2|BM443588 EBro02_SQ005_M15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_M15 5', mRNA sequence
Length = 652
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 585 gctcgccggcgtcgccgtcgtcg 607
|||||||| ||||||||||||||
Sbjct: 108 gctcgccgtcgtcgccgtcgtcg 130
>gb|BI778631.2|BI778631 EBro07_SQ003_N18_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_N18 5', mRNA sequence
Length = 513
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1449 cgacggcgacgagatcttc 1467
|||||||||||||||||||
Sbjct: 191 cgacggcgacgagatcttc 209
>gb|BQ754719.1|BQ754719 EBed01_SQ003_J22_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ003_J22 5', mRNA sequence
Length = 365
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 176 cgccggcgtcgccgtcgtc 194
>gb|BQ760390.1|BQ760390 EBro01_SQ002_P22_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ002_P22 5', mRNA sequence
Length = 137
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 585 gctcgccggcgtcgccgtcgtcg 607
|||||||| ||||||||||||||
Sbjct: 113 gctcgccgtcgtcgccgtcgtcg 135
>gb|BQ765035.1|BQ765035 EBca01_SQ005_I17_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_I17 5', mRNA sequence
Length = 534
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 94 cgccgccgccaccacggcc 76
>gb|BQ765785.1|BQ765785 EBro03_SQ008_L06_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_L06 5', mRNA sequence
Length = 546
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 585 gctcgccggcgtcgccgtcgtcg 607
|||||||| ||||||||||||||
Sbjct: 111 gctcgccgtcgtcgccgtcgtcg 133
>gb|BU969285.1|BU969285 HB11B11r BC Hordeum vulgare subsp. vulgare cDNA clone HB11B11
5-PRIME, mRNA sequence
Length = 495
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 35 cgccggcgtcgccgtcgtc 53
>gb|BU978604.1|BU978604 HA13L13r HA Hordeum vulgare subsp. vulgare cDNA clone HA13L13
5-PRIME, mRNA sequence
Length = 414
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 688 gaggcggcggcggccatcg 706
|||||||||||||||||||
Sbjct: 40 gaggcggcggcggccatcg 22
>gb|BU982452.1|BU982452 HA26J13r HA Hordeum vulgare subsp. vulgare cDNA clone HA26J13
5-PRIME, mRNA sequence
Length = 358
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 243 cgccggcgtcgccgtcgtc 261
>gb|BU984308.1|BU984308 HF03J04r HF Hordeum vulgare subsp. vulgare cDNA clone HF03J04
5-PRIME, mRNA sequence
Length = 523
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 199 cgccggcgtcgccgtcgtc 217
>gb|BU984708.1|BU984708 HF04M02r HF Hordeum vulgare subsp. vulgare cDNA clone HF04M02
5-PRIME, mRNA sequence
Length = 531
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 72 cgccggcgtcgccgtcgtc 90
>gb|BU984776.1|BU984776 HF04P15r HF Hordeum vulgare subsp. vulgare cDNA clone HF04P15
5-PRIME, mRNA sequence
Length = 388
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 20 cgccgccgccaccacggcc 2
>gb|BU987135.1|BU987135 HF13O09r HF Hordeum vulgare subsp. vulgare cDNA clone HF13O09
5-PRIME, mRNA sequence
Length = 626
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 26 cgccggcgtcgccgtcgtc 44
>gb|BU990035.1|BU990035 HF23M21r HF Hordeum vulgare subsp. vulgare cDNA clone HF23M21
5-PRIME, mRNA sequence
Length = 457
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 89 cgccgccgccaccacggcc 71
>gb|BU996007.1|BU996007 HM12B11r HM Hordeum vulgare subsp. vulgare cDNA clone HM12B11
5-PRIME, mRNA sequence
Length = 498
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 130 cgccgccgccaccacggcc 112
>gb|CA000092.1|CA000092 HS09L23u HS Hordeum vulgare subsp. vulgare cDNA clone HS09L23
3-PRIME, mRNA sequence
Length = 503
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 342 cgccgccgccaccacggcc 360
>gb|CA002390.1|CA002390 HS07F15r HS Hordeum vulgare subsp. vulgare cDNA clone HS07F15
5-PRIME, mRNA sequence
Length = 459
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 108 cgccggcgtcgccgtcgtc 126
>gb|CA003717.1|CA003717 HS15F13r HS Hordeum vulgare subsp. vulgare cDNA clone HS15F13
5-PRIME, mRNA sequence
Length = 202
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 688 gaggcggcggcggccatcg 706
|||||||||||||||||||
Sbjct: 87 gaggcggcggcggccatcg 69
>gb|CA006632.1|CA006632 HU05E01r HU Hordeum vulgare subsp. vulgare cDNA clone HU05E01
5-PRIME, mRNA sequence
Length = 421
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 188 cgccgccgccaccacggcc 170
>gb|CA023179.1|CA023179 HZ45H13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45H13
5-PRIME, mRNA sequence
Length = 453
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 891 ctcgctgcactccatcctg 909
|||||||||||||||||||
Sbjct: 344 ctcgctgcactccatcctg 362
>gb|CA023908.1|CA023908 HZ47M13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47M13
5-PRIME, mRNA sequence
Length = 350
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 140 cgccgccgccaccacggcc 122
>gb|CA031142.1|CA031142 HX09C06r HX Hordeum vulgare subsp. vulgare cDNA clone HX09C06
5-PRIME, mRNA sequence
Length = 636
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1442 acgtcgacgacggcgacga 1460
|||||||||||||||||||
Sbjct: 428 acgtcgacgacggcgacga 446
>gb|CB859764.1|CB859764 HI11I11w HI Hordeum vulgare subsp. vulgare cDNA clone HI11I11
3-PRIME, mRNA sequence
Length = 500
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 361 cgccgccgccaccacggcc 379
>gb|CB874990.1|CB874990 HX06P03w HX Hordeum vulgare subsp. vulgare cDNA clone HX06P03
3-PRIME, mRNA sequence
Length = 482
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 370 cgccgccgccaccacggcc 388
>gb|CB876663.1|CB876663 HX11P14w HX Hordeum vulgare subsp. vulgare cDNA clone HX11P14
3-PRIME, mRNA sequence
Length = 494
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 357 cgccgccgccaccacggcc 375
>gb|CB880578.1|CB880578 HM06P12w HM Hordeum vulgare subsp. vulgare cDNA clone HM06P12
3-PRIME, mRNA sequence
Length = 509
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 375 cgccgccgccaccacggcc 393
>gb|CB883509.1|CB883509 HQ02H15w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02H15
3-PRIME, mRNA sequence
Length = 597
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1170 ttatgggatgacagaggca 1188
|||||||||||||||||||
Sbjct: 542 ttatgggatgacagaggca 560
>gb|CV053733.1|CV053733 BNEL102f10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL102f10 5' similar to putative
polyprotein, mRNA sequence
Length = 336
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 149 cgccggcgtcgccgtcgtc 167
>gb|CV055006.1|CV055006 BNEL115g12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL115g12 5' similar to putative
polyprotein, mRNA sequence
Length = 373
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 186 cgccggcgtcgccgtcgtc 204
>gb|CV055107.1|CV055107 BNEL116h6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL116h6 5' similar to putative
polyprotein, mRNA sequence
Length = 367
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 180 cgccggcgtcgccgtcgtc 198
>gb|CV055394.1|CV055394 BNEL11B12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL11B12 5' similar to putative
polyprotein, mRNA sequence
Length = 367
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 180 cgccggcgtcgccgtcgtc 198
>gb|CV055620.1|CV055620 BNEL121f5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL121f5 5' similar to putative
polyprotein, mRNA sequence
Length = 377
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 190 cgccggcgtcgccgtcgtc 208
>gb|CV055711.1|CV055711 BNEL122f3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL122f3 5' similar to putative
polyprotein, mRNA sequence
Length = 373
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 186 cgccggcgtcgccgtcgtc 204
>gb|CV056581.1|CV056581 BNEL19D12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL19D12 5' similar to cold shock
domain protein 3, mRNA sequence
Length = 507
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 402 cgccgccgccaccacggcc 420
>gb|CV056664.1|CV056664 BNEL1C3 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL1C3 5' similar to putative polyprotein,
mRNA sequence
Length = 373
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 186 cgccggcgtcgccgtcgtc 204
>gb|CV057009.1|CV057009 BNEL23a4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL23a4 5' similar to putative
polyprotein, mRNA sequence
Length = 336
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 149 cgccggcgtcgccgtcgtc 167
>gb|CV057170.1|CV057170 BNEL24g6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL24g6 5' similar to putative
polyprotein, mRNA sequence
Length = 373
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 186 cgccggcgtcgccgtcgtc 204
>gb|CV057426.1|CV057426 BNEL27g1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL27g1 5' similar to putative
polyprotein, mRNA sequence
Length = 373
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 186 cgccggcgtcgccgtcgtc 204
>gb|CV057542.1|CV057542 BNEL29a4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL29a4 5' similar to Triticum
aestivum WCSP2 mRNA for cold shock domain protein 2,
complete cds, mRNA sequence
Length = 482
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 79 cgccgccgccaccacggcc 61
>gb|CV057957.1|CV057957 BNEL32g3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL32g3 5' similar to putative
polyprotein, mRNA sequence
Length = 367
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 180 cgccggcgtcgccgtcgtc 198
>gb|CV058834.1|CV058834 BNEL41e2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL41e2 5' similar to putative
polyprotein, mRNA sequence
Length = 336
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 149 cgccggcgtcgccgtcgtc 167
>gb|CV060485.1|CV060485 BNEL58f6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL58f6 5' similar to putative
polyprotein, mRNA sequence
Length = 374
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 186 cgccggcgtcgccgtcgtc 204
>gb|CV061141.1|CV061141 BNEL65d6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL65d6 5' similar to putative
polyprotein, mRNA sequence
Length = 373
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 186 cgccggcgtcgccgtcgtc 204
>gb|CV062435.1|CV062435 BNEL7A2 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL7A2 5' similar to putative polyprotein,
mRNA sequence
Length = 377
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 190 cgccggcgtcgccgtcgtc 208
>gb|CV062651.1|CV062651 BNEL81d8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL81d8 5' similar to putative
polyprotein, mRNA sequence
Length = 373
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 588 cgccggcgtcgccgtcgtc 606
|||||||||||||||||||
Sbjct: 186 cgccggcgtcgccgtcgtc 204
>gb|CV063127.1|CV063127 BNEL86h7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL86h7 5' similar to Triticum
aestivum WCSP2 mRNA for cold shock domain protein 2,
complete cds, mRNA sequence
Length = 482
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 79 cgccgccgccaccacggcc 61
>gb|CV064173.1|CV064173 BNEL98h12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL98h12 5' similar to cold shock
domain protein 3, mRNA sequence
Length = 462
Score = 38.2 bits (19), Expect = 1.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 357 cgccgccgccaccacggcc 375
>gb|BE411138.1|BE411138 ISC002.D12F990513 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC002.D12, mRNA sequence
Length = 327
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 698 cggccatcgacgtggcga 715
||||||||||||||||||
Sbjct: 47 cggccatcgacgtggcga 64
>gb|BE421197.1|BE421197 HWM006.G10 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM006.G10, mRNA sequence
Length = 800
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 698 cggccatcgacgtggcga 715
||||||||||||||||||
Sbjct: 180 cggccatcgacgtggcga 197
>gb|AL500116.1|AL500116 AL500116 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04P08r 3', mRNA sequence
Length = 514
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 529 gcctccggcgccaccgtc 546
||||||||||||||||||
Sbjct: 288 gcctccggcgccaccgtc 305
>gb|AL502400.1|AL502400 AL502400 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07H09u 3', mRNA sequence
Length = 386
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 305 tcgtcgacgccgccgtcg 322
>gb|AL504230.1|AL504230 AL504230 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04J18V 5', mRNA sequence
Length = 642
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 100 tcttcttcgtggaggcca 83
>gb|AL505142.1|AL505142 AL505142 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I12V 5', mRNA sequence
Length = 551
Score = 36.2 bits (18), Expect = 4.3
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 860 tcctctgcgtgctgcccatgttccac 885
|||||||| | |||||||||||||||
Sbjct: 328 tcctctgcttcctgcccatgttccac 353
>gb|AL507401.1|AL507401 AL507401 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05H08V 5',
mRNA sequence
Length = 580
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 82 tcttcttcgtggaggcca 65
>gb|AL509011.1|AL509011 AL509011 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10H08V 5',
mRNA sequence
Length = 655
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 599 ccgtcgtcgccacgggcg 616
||||||||||||||||||
Sbjct: 449 ccgtcgtcgccacgggcg 466
>gb|AL509270.1|AL509270 AL509270 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY01E03u 3',
mRNA sequence
Length = 583
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 305 tcgtcgacgccgccgtcg 322
>gb|BF621225.2|BF621225 HVSMEa0006B19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0006B19f, mRNA sequence
Length = 845
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 690 ggcggcggcggccatcga 707
||||||||||||||||||
Sbjct: 88 ggcggcggcggccatcga 71
>gb|BG299762.1|BG299762 HVSMEa0021L10f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021L10f, mRNA sequence
Length = 834
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 690 ggcggcggcggccatcga 707
||||||||||||||||||
Sbjct: 86 ggcggcggcggccatcga 69
>gb|BE602014.1|BE602014 HVSMEh0102A07f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102A07f, mRNA sequence
Length = 668
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 698 cggccatcgacgtggcga 715
||||||||||||||||||
Sbjct: 310 cggccatcgacgtggcga 327
>gb|BF254526.1|BF254526 HVSMEf0004E11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0004E11f, mRNA sequence
Length = 872
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 101 tcttcttcgtggaggcca 84
>gb|BG300629.1|BG300629 HVSMEb0017L22f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017L22f, mRNA sequence
Length = 874
Score = 36.2 bits (18), Expect = 4.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 921 gcgcgccggcgcggcgctcgtg 942
||||||||||||||||| ||||
Sbjct: 82 gcgcgccggcgcggcgcgcgtg 61
>gb|BG301107.1|BG301107 HVSMEb0019J08f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019J08f, mRNA sequence
Length = 919
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 690 ggcggcggcggccatcga 707
||||||||||||||||||
Sbjct: 106 ggcggcggcggccatcga 89
>gb|BF616609.2|BF616609 HVSMEc0010M07f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0010M07f, mRNA sequence
Length = 742
Score = 36.2 bits (18), Expect = 4.3
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1014 cgtgctgcccatcgcggtggag 1035
||||||||||| ||||||||||
Sbjct: 314 cgtgctgcccaacgcggtggag 335
>gb|BF620489.2|BF620489 HVSMEc0020A21f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0020A21f, mRNA sequence
Length = 855
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1257 cacggtggtgaggaatgc 1274
||||||||||||||||||
Sbjct: 222 cacggtggtgaggaatgc 239
>gb|BF620533.2|BF620533 HVSMEc0020C18f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0020C18f, mRNA sequence
Length = 674
Score = 36.2 bits (18), Expect = 4.3
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 860 tcctctgcgtgctgcccatgttccac 885
|||||||| | |||||||||||||||
Sbjct: 418 tcctctgcttcctgcccatgttccac 443
>gb|BG309761.1|BG309761 HVSMEc0012H12f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0012H12f, mRNA sequence
Length = 863
Score = 36.2 bits (18), Expect = 4.3
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 456 ctcccgcctcggcgccgccgcc 477
|||||||||||||| |||||||
Sbjct: 15 ctcccgcctcggcggcgccgcc 36
>gb|BG309914.1|BG309914 HVSMEc0014L03f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0014L03f, mRNA sequence
Length = 831
Score = 36.2 bits (18), Expect = 4.3
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 679 gcgctgcctgaggcggcggcggccat 704
|||||| | |||||||||||||||||
Sbjct: 92 gcgctggccgaggcggcggcggccat 117
>gb|AW983295.2|AW983295 HVSMEg0010B19f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010B19f, mRNA sequence
Length = 864
Score = 36.2 bits (18), Expect = 4.3
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 456 ctcccgcctcggcgccgccgcc 477
|||||||||||||| |||||||
Sbjct: 153 ctcccgcctcggcggcgccgcc 174
>gb|BG343538.1|BG343538 HVSMEg0006F08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006F08f, mRNA sequence
Length = 996
Score = 36.2 bits (18), Expect = 4.3
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 456 ctcccgcctcggcgccgccgcc 477
|||||||||||||| |||||||
Sbjct: 122 ctcccgcctcggcggcgccgcc 143
>gb|BE601561.2|BE601561 HVSMEh0098I02f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0098I02f, mRNA sequence
Length = 640
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1442 acgtcgacgacggcgacg 1459
||||||||||||||||||
Sbjct: 169 acgtcgacgacggcgacg 152
>gb|BE601959.2|BE601959 HVSMEh0100H24f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0100H24f, mRNA sequence
Length = 730
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 92 tcttcttcgtggaggcca 75
>gb|BI949829.1|BI949829 HVSMEl0016F06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0016F06f, mRNA sequence
Length = 532
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 688 gaggcggcggcggccatc 705
||||||||||||||||||
Sbjct: 467 gaggcggcggcggccatc 484
>gb|BI951853.1|BI951853 HVSMEm0003E13f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0003E13f, mRNA sequence
Length = 1154
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1010 cgctcgtgctgcccatcg 1027
||||||||||||||||||
Sbjct: 980 cgctcgtgctgcccatcg 963
>gb|BI954332.1|BI954332 HVSMEm0017E17f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0017E17f, mRNA sequence
Length = 686
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 595 gtcgccgtcgtcgccacg 612
||||||||||||||||||
Sbjct: 405 gtcgccgtcgtcgccacg 388
>gb|BI956135.1|BI956135 HVSMEm0025M12f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0025M12f, mRNA sequence
Length = 689
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 690 ggcggcggcggccatcga 707
||||||||||||||||||
Sbjct: 84 ggcggcggcggccatcga 67
>gb|BI956317.1|BI956317 HVSMEn0002F14f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0002F14f,
mRNA sequence
Length = 852
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1627 gcgtccggcggctccggg 1644
||||||||||||||||||
Sbjct: 214 gcgtccggcggctccggg 197
>gb|BI957330.1|BI957330 HVSMEn0008P13f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0008P13f,
mRNA sequence
Length = 453
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1442 acgtcgacgacggcgacg 1459
||||||||||||||||||
Sbjct: 167 acgtcgacgacggcgacg 150
>gb|BF261492.1|BF261492 HV_CEa0001G21f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001G21f, mRNA sequence
Length = 856
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 698 cggccatcgacgtggcga 715
||||||||||||||||||
Sbjct: 435 cggccatcgacgtggcga 452
>gb|BF262674.1|BF262674 HV_CEa0004K03f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0004K03f, mRNA sequence
Length = 833
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1257 cacggtggtgaggaatgc 1274
||||||||||||||||||
Sbjct: 135 cacggtggtgaggaatgc 152
>gb|BF264177.2|BF264177 HV_CEa0008L17f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0008L17f, mRNA sequence
Length = 445
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 81 tcttcttcgtggaggcca 64
>gb|BF064652.2|BF064652 HV_CEb0016K19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016K19f, mRNA sequence
Length = 590
Score = 36.2 bits (18), Expect = 4.3
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 456 ctcccgcctcggcgccgccgcc 477
|||||||||||||| |||||||
Sbjct: 122 ctcccgcctcggcggcgccgcc 143
>gb|BG415088.1|BG415088 HVSMEk0005B17f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0005B17f, mRNA sequence
Length = 657
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1442 acgtcgacgacggcgacg 1459
||||||||||||||||||
Sbjct: 159 acgtcgacgacggcgacg 142
>gb|BG416105.1|BG416105 HVSMEk0009M10f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0009M10f, mRNA sequence
Length = 1010
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 369 tcgtcgacgccgccgtcg 352
>gb|BG416670.1|BG416670 HVSMEk0014A24f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014A24f, mRNA sequence
Length = 495
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 463 ctcggcgccgccgccacc 480
||||||||||||||||||
Sbjct: 124 ctcggcgccgccgccacc 141
>gb|BI959254.1|BI959254 HVSMEn0018O18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018O18f, mRNA sequence
Length = 670
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 698 cggccatcgacgtggcga 715
||||||||||||||||||
Sbjct: 399 cggccatcgacgtggcga 382
>gb|BI960293.1|BI960293 HVSMEn0024C02f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024C02f,
mRNA sequence
Length = 666
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1442 acgtcgacgacggcgacg 1459
||||||||||||||||||
Sbjct: 168 acgtcgacgacggcgacg 151
>gb|BI960599.1|BI960599 HVSMEn0025E20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025E20f, mRNA sequence
Length = 667
Score = 36.2 bits (18), Expect = 4.3
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 522 ggcggcggcctccggcgccaccgtcg 547
||||||||| ||||||||||| ||||
Sbjct: 101 ggcggcggcatccggcgccacggtcg 76
>gb|BE230920.2|BE230920 HVSMEg0001K06f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001K06f, mRNA sequence
Length = 608
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 47 tcttcttcgtggaggcca 30
>gb|BE231110.2|BE231110 HVSMEg0016L15f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016L15f, mRNA sequence
Length = 905
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 698 cggccatcgacgtggcga 715
||||||||||||||||||
Sbjct: 377 cggccatcgacgtggcga 394
>gb|BF626900.3|BF626900 HVSMEb0001K08f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0001K08f, mRNA sequence
Length = 573
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 74 tcttcttcgtggaggcca 57
>gb|BF256595.3|BF256595 HVSMEf0010H05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0010H05f, mRNA sequence
Length = 583
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1442 acgtcgacgacggcgacg 1459
||||||||||||||||||
Sbjct: 152 acgtcgacgacggcgacg 135
>gb|BG343326.2|BG343326 HVSMEg0005G20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005G20f, mRNA sequence
Length = 569
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 84 tcttcttcgtggaggcca 67
>gb|BG344371.2|BG344371 HVSMEg0009B07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009B07f, mRNA sequence
Length = 698
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 97 tcttcttcgtggaggcca 80
>gb|BE193675.3|BE193675 HVSMEh0082C16f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0082C16f, mRNA sequence
Length = 752
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 99 tcttcttcgtggaggcca 82
>gb|BE194157.3|BE194157 HVSMEh0084F07f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0084F07f, mRNA sequence
Length = 568
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 690 ggcggcggcggccatcga 707
||||||||||||||||||
Sbjct: 76 ggcggcggcggccatcga 59
>gb|BE603125.3|BE603125 HVSMEh0102B12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102B12f, mRNA sequence
Length = 530
Score = 36.2 bits (18), Expect = 4.3
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 456 ctcccgcctcggcgccgccgcc 477
|||||||||||||| |||||||
Sbjct: 16 ctcccgcctcggcggcgccgcc 37
>gb|BG416947.2|BG416947 HVSMEk0015E23f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0015E23f, mRNA sequence
Length = 489
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1442 acgtcgacgacggcgacg 1459
||||||||||||||||||
Sbjct: 162 acgtcgacgacggcgacg 145
>gb|BF262577.3|BF262577 HV_CEa0004G01f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0004G01f, mRNA sequence
Length = 814
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 690 ggcggcggcggccatcga 707
||||||||||||||||||
Sbjct: 81 ggcggcggcggccatcga 64
>gb|BE215179.2|BE215179 HV_CEb0006B09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006B09f, mRNA sequence
Length = 924
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1474 gaccggctcaaggagctc 1491
||||||||||||||||||
Sbjct: 225 gaccggctcaaggagctc 242
>gb|BF066019.3|BF066019 HV_CEb0014J22f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014J22f, mRNA sequence
Length = 954
Score = 36.2 bits (18), Expect = 4.3
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 522 ggcggcggcctccggcgccaccgtcg 547
|||||||||||||||| |||| ||||
Sbjct: 271 ggcggcggcctccggcaccacggtcg 246
>gb|BE558631.3|BE558631 HV_CEb0019I06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0019I06f, mRNA sequence
Length = 588
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 591 cggcgtcgccgtcgtcgc 608
||||||||||||||||||
Sbjct: 281 cggcgtcgccgtcgtcgc 264
>gb|BM374596.1|BM374596 EBma05_SQ002_B18_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ002_B18 5', mRNA sequence
Length = 510
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 88 tcttcttcgtggaggcca 71
>gb|BM374940.1|BM374940 EBma05_SQ003_L07_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ003_L07 5', mRNA sequence
Length = 440
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 690 ggcggcggcggccatcga 707
||||||||||||||||||
Sbjct: 89 ggcggcggcggccatcga 72
>gb|AV911163.1|AV911163 AV911163 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak12d23 3', mRNA sequence
Length = 567
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 248 tcgtcgacgccgccgtcg 265
>gb|AV912874.1|AV912874 AV912874 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10l22 5', mRNA sequence
Length = 579
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 281 tcgtcgacgccgccgtcg 264
>gb|AV917017.1|AV917017 AV917017 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h16 5', mRNA sequence
Length = 577
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 303 tcgtcgacgccgccgtcg 286
>gb|AV917622.1|AV917622 AV917622 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10l22 3', mRNA sequence
Length = 540
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 271 tcgtcgacgccgccgtcg 288
>gb|AV918270.1|AV918270 AV918270 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h16 3', mRNA sequence
Length = 560
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 258 tcgtcgacgccgccgtcg 275
>gb|AV919176.1|AV919176 AV919176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4n21 3', mRNA sequence
Length = 590
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 270 tcgtcgacgccgccgtcg 287
>gb|AV920296.1|AV920296 AV920296 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13d10 3', mRNA sequence
Length = 660
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 239 tcgtcgacgccgccgtcg 256
>gb|AV921426.1|AV921426 AV921426 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23g04 3', mRNA sequence
Length = 674
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 150 tcgtcgacgccgccgtcg 167
>gb|AV928187.1|AV928187 AV928187 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd27e19 3', mRNA sequence
Length = 701
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 139 tcgtcgacgccgccgtcg 156
>gb|AV929618.1|AV929618 AV929618 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd14o14 3', mRNA sequence
Length = 618
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 298 tcgtcgacgccgccgtcg 315
>gb|BM444378.1|BM444378 EBem09_SQ004_P15_R embryo, 1 Day germination, no treatment, cv Optic,
EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_P15 5', mRNA sequence
Length = 346
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 48 tcgtcgacgccgccgtcg 31
>gb|BM816676.1|BM816676 HB01C09_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01C09_T3.ab1 similar to Renilla-luciferin
2-monooxygenase,4-coumarate--CoA ligase, mRNA sequence
Length = 865
Score = 36.2 bits (18), Expect = 4.3
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 860 tcctctgcgtgctgcccatgttccac 885
|||||||| | |||||||||||||||
Sbjct: 77 tcctctgcttcctgcccatgttccac 102
>gb|AJ433822.1|AJ433822 AJ433822 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200012E08F1, mRNA sequence
Length = 312
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 25 tcgtcgacgccgccgtcg 8
>gb|AJ463173.1|AJ463173 AJ463173 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200042H03F1, mRNA sequence
Length = 420
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 688 gaggcggcggcggccatc 705
||||||||||||||||||
Sbjct: 188 gaggcggcggcggccatc 205
>gb|AJ463537.1|AJ463537 AJ463537 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200021E02F1, mRNA sequence
Length = 300
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 20 tcttcttcgtggaggcca 3
>gb|AJ463538.1|AJ463538 AJ463538 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200026E09F2, mRNA sequence
Length = 360
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 80 tcttcttcgtggaggcca 63
>gb|AJ463539.1|AJ463539 AJ463539 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200036D04F1, mRNA sequence
Length = 360
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 80 tcttcttcgtggaggcca 63
>gb|AJ463541.1|AJ463541 AJ463541 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200076C07F1, mRNA sequence
Length = 360
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 79 tcttcttcgtggaggcca 62
>gb|BJ466310.1|BJ466310 BJ466310 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31i21 3', mRNA sequence
Length = 626
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 688 gaggcggcggcggccatc 705
||||||||||||||||||
Sbjct: 369 gaggcggcggcggccatc 352
>gb|BJ469245.1|BJ469245 BJ469245 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13n14 5', mRNA sequence
Length = 388
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 698 cggccatcgacgtggcga 715
||||||||||||||||||
Sbjct: 8 cggccatcgacgtggcga 25
>gb|BJ471166.1|BJ471166 BJ471166 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17b12 5', mRNA sequence
Length = 433
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 698 cggccatcgacgtggcga 715
||||||||||||||||||
Sbjct: 55 cggccatcgacgtggcga 72
>gb|BJ473797.1|BJ473797 BJ473797 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17b12 3', mRNA sequence
Length = 380
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 698 cggccatcgacgtggcga 715
||||||||||||||||||
Sbjct: 325 cggccatcgacgtggcga 308
>gb|BJ474451.1|BJ474451 BJ474451 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13n14 3', mRNA sequence
Length = 344
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 698 cggccatcgacgtggcga 715
||||||||||||||||||
Sbjct: 337 cggccatcgacgtggcga 320
>gb|BQ459615.1|BQ459615 HA08J14r HA Hordeum vulgare subsp. vulgare cDNA clone HA08J14
5-PRIME, mRNA sequence
Length = 528
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 690 ggcggcggcggccatcga 707
||||||||||||||||||
Sbjct: 30 ggcggcggcggccatcga 13
>gb|BQ460823.1|BQ460823 HA05N02r HA Hordeum vulgare subsp. vulgare cDNA clone HA05N02
5-PRIME, mRNA sequence
Length = 429
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 141 tcgtcgacgccgccgtcg 124
>gb|BQ462848.1|BQ462848 HI02D05r HI Hordeum vulgare subsp. vulgare cDNA clone HI02D05
5-PRIME, mRNA sequence
Length = 533
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 93 tcttcttcgtggaggcca 76
>gb|BQ463458.1|BQ463458 HI05F11r HI Hordeum vulgare subsp. vulgare cDNA clone HI05F11
5-PRIME, mRNA sequence
Length = 493
Score = 36.2 bits (18), Expect = 4.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 583 gggctcgccggcgtcgccgtcg 604
||||||||||||| ||||||||
Sbjct: 46 gggctcgccggcgccgccgtcg 25
>gb|BQ463967.1|BQ463967 HG01P18r HG Hordeum vulgare subsp. vulgare cDNA clone HG01P18
5-PRIME, mRNA sequence
Length = 559
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1474 gaccggctcaaggagctc 1491
||||||||||||||||||
Sbjct: 186 gaccggctcaaggagctc 203
>gb|BQ469073.1|BQ469073 HM03E21r HM Hordeum vulgare subsp. vulgare cDNA clone HM03E21
5-PRIME, mRNA sequence
Length = 489
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 690 ggcggcggcggccatcga 707
||||||||||||||||||
Sbjct: 84 ggcggcggcggccatcga 67
>gb|BQ469162.1|BQ469162 HM03J12r HM Hordeum vulgare subsp. vulgare cDNA clone HM03J12
5-PRIME, mRNA sequence
Length = 430
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 465 cggcgccgccgccaccac 482
||||||||||||||||||
Sbjct: 75 cggcgccgccgccaccac 58
>gb|BQ469206.1|BQ469206 HM03L12r HM Hordeum vulgare subsp. vulgare cDNA clone HM03L12
5-PRIME, mRNA sequence
Length = 535
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 465 cggcgccgccgccaccac 482
||||||||||||||||||
Sbjct: 114 cggcgccgccgccaccac 97
>gb|BQ656606.1|BQ656606 HA02O01u HA Hordeum vulgare subsp. vulgare cDNA clone HA02O01
3-PRIME, mRNA sequence
Length = 577
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 287 tcgtcgacgccgccgtcg 304
>gb|BQ660336.1|BQ660336 HI01P19w HI Hordeum vulgare subsp. vulgare cDNA clone HI01P19
3-PRIME, mRNA sequence
Length = 565
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 286 tcgtcgacgccgccgtcg 303
>gb|BQ663997.1|BQ663997 HU04P10u HU Hordeum vulgare subsp. vulgare cDNA clone HU04P10
3-PRIME, mRNA sequence
Length = 509
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 688 gaggcggcggcggccatc 705
||||||||||||||||||
Sbjct: 314 gaggcggcggcggccatc 297
>gb|BM442020.2|BM442020 EBan01_SQ001_M06_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ001_M06 5', mRNA sequence
Length = 584
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 465 cggcgccgccgccaccac 482
||||||||||||||||||
Sbjct: 54 cggcgccgccgccaccac 37
>gb|BM442660.2|BM442660 EBan01_SQ003_M21_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_M21 5', mRNA sequence
Length = 386
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 465 cggcgccgccgccaccac 482
||||||||||||||||||
Sbjct: 73 cggcgccgccgccaccac 56
>gb|BM441153.2|BM441153 EBed02_SQ002_J08_R endosperm, 8 DPA, no treatment, cv Optic, EBed02
Hordeum vulgare subsp. vulgare cDNA clone
EBed02_SQ002_J08 5', mRNA sequence
Length = 532
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 77 tcttcttcgtggaggcca 60
>gb|BM097608.2|BM097608 EBem04_SQ002_D02_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_D02 5', mRNA sequence
Length = 353
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 690 ggcggcggcggccatcga 707
||||||||||||||||||
Sbjct: 85 ggcggcggcggccatcga 68
>gb|BM097859.2|BM097859 EBem04_SQ002_O14_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_O14 5', mRNA sequence
Length = 445
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 690 ggcggcggcggccatcga 707
||||||||||||||||||
Sbjct: 89 ggcggcggcggccatcga 72
>gb|BM368923.2|BM368923 EBem07_SQ002_A08_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ002_A08 5', mRNA sequence
Length = 343
Score = 36.2 bits (18), Expect = 4.3
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 915 cgggatgcgcgccggcgcggcgctcg 940
|||| ||| |||||||||||||||||
Sbjct: 303 cgggctgctcgccggcgcggcgctcg 328
>gb|BM376037.2|BM376037 EBma01_SQ002_C14_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_C14 5', mRNA sequence
Length = 554
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 688 gaggcggcggcggccatc 705
||||||||||||||||||
Sbjct: 490 gaggcggcggcggccatc 507
>gb|BM096545.2|BM096545 EBma03_SQ001_O19_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ001_O19 5', mRNA sequence
Length = 484
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 698 cggccatcgacgtggcga 715
||||||||||||||||||
Sbjct: 293 cggccatcgacgtggcga 310
>gb|BM100749.2|BM100749 EBpi01_SQ001_I05_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ001_I05 5', mRNA sequence
Length = 420
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 229 tcgtcgacgccgccgtcg 212
>gb|BI776795.2|BI776795 EBpi07_SQ001_M11_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_M11 5', mRNA sequence
Length = 517
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 599 ccgtcgtcgccacgggcg 616
||||||||||||||||||
Sbjct: 482 ccgtcgtcgccacgggcg 499
>gb|BI778809.2|BI778809 EBro01_SQ001_J09_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_J09 5', mRNA sequence
Length = 440
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1442 acgtcgacgacggcgacg 1459
||||||||||||||||||
Sbjct: 163 acgtcgacgacggcgacg 146
>gb|BQ754384.1|BQ754384 EBca01_SQ003_M16_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ003_M16 5', mRNA sequence
Length = 560
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 85 tcttcttcgtggaggcca 68
>gb|BQ758056.1|BQ758056 EBes01_SQ001_O12_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ001_O12 5', mRNA sequence
Length = 331
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 283 tcgtcgacgccgccgtcg 300
>gb|BQ759857.1|BQ759857 EBpi05_SQ004_J17_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_J17 5', mRNA sequence
Length = 414
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1474 gaccggctcaaggagctc 1491
||||||||||||||||||
Sbjct: 232 gaccggctcaaggagctc 249
>gb|BQ760097.1|BQ760097 EBpi07_SQ003_O01_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ003_O01 5', mRNA sequence
Length = 468
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 184 tcgtcgacgccgccgtcg 167
>gb|BQ761714.1|BQ761714 EBem10_SQ001_K14_R embryo, 2 Day germination, no treatment, cv Optic,
EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_K14 5', mRNA sequence
Length = 326
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 276 tcgtcgacgccgccgtcg 259
>gb|BQ767641.1|BQ767641 EBro08_SQ009_O12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_O12 5', mRNA sequence
Length = 201
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 85 tcgtcgacgccgccgtcg 68
>gb|BQ767699.1|BQ767699 EBro08_SQ009_I17_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_I17 5', mRNA sequence
Length = 491
Score = 36.2 bits (18), Expect = 4.3
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1653 ggacgagatcaagcagtacgtg 1674
||||||| ||||||||||||||
Sbjct: 134 ggacgagttcaagcagtacgtg 155
>gb|BU970065.1|BU970065 HB13H20r BC Hordeum vulgare subsp. vulgare cDNA clone HB13H20
5-PRIME, mRNA sequence
Length = 404
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 95 tcttcttcgtggaggcca 78
>gb|BU971951.1|BU971951 HB20C16r BC Hordeum vulgare subsp. vulgare cDNA clone HB20C16
5-PRIME, mRNA sequence
Length = 551
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 431 tcgtcgacgccgccgtcg 414
>gb|BU976524.1|BU976524 HA03N15r HA Hordeum vulgare subsp. vulgare cDNA clone HA03N15
5-PRIME, mRNA sequence
Length = 331
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 46 tcgtcgacgccgccgtcg 29
>gb|BU976575.1|BU976575 HA03O23r HA Hordeum vulgare subsp. vulgare cDNA clone HA03O23
5-PRIME, mRNA sequence
Length = 536
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcg 1576
||||||||||||||||||
Sbjct: 331 tcgtcgacgccgccgtcg 314
>gb|BU977038.1|BU977038 HA10L20r HA Hordeum vulgare subsp. vulgare cDNA clone HA10L20
5-PRIME, mRNA sequence
Length = 521
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 82 tcttcttcgtggaggcca 65
>gb|BU977039.1|BU977039 HA10L20u HA Hordeum vulgare subsp. vulgare cDNA clone HA10L20
3-PRIME, mRNA sequence
Length = 527
Score = 36.2 bits (18), Expect = 4.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1712 tcttcttcgtggaggcca 1729
||||||||||||||||||
Sbjct: 459 tcttcttcgtggaggcca 476
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 381,661
Number of Sequences: 312970
Number of extensions: 381661
Number of successful extensions: 137638
Number of sequences better than 10.0: 346
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136698
Number of HSP's gapped (non-prelim): 917
length of query: 1986
length of database: 175,134,539
effective HSP length: 20
effective length of query: 1966
effective length of database: 168,875,139
effective search space: 332008523274
effective search space used: 332008523274
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)