BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3838122.2.1
(1865 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV932241.1|AV932241 AV932241 K. Sato unpublished cDNA li... 224 8e-057
gb|AV933260.1|AV933260 AV933260 K. Sato unpublished cDNA li... 224 8e-057
gb|CA021243.1|CA021243 HZ39I13r HZ Hordeum vulgare subsp. v... 224 8e-057
gb|BJ470753.1|BJ470753 BJ470753 K. Sato unpublished cDNA li... 192 3e-047
gb|AV932394.1|AV932394 AV932394 K. Sato unpublished cDNA li... 180 1e-043
gb|AV933740.1|AV933740 AV933740 K. Sato unpublished cDNA li... 180 1e-043
gb|AV933741.1|AV933741 AV933741 K. Sato unpublished cDNA li... 180 1e-043
gb|AV933837.1|AV933837 AV933837 K. Sato unpublished cDNA li... 180 1e-043
gb|AV934074.1|AV934074 AV934074 K. Sato unpublished cDNA li... 180 1e-043
gb|BJ469279.1|BJ469279 BJ469279 K. Sato unpublished cDNA li... 180 1e-043
gb|BJ472857.1|BJ472857 BJ472857 K. Sato unpublished cDNA li... 180 1e-043
gb|BJ470006.1|BJ470006 BJ470006 K. Sato unpublished cDNA li... 178 4e-043
gb|BF254441.2|BF254441 HVSMEf0004A12f Hordeum vulgare seedl... 176 2e-042
gb|AV933409.1|AV933409 AV933409 K. Sato unpublished cDNA li... 172 3e-041
gb|AV933574.1|AV933574 AV933574 K. Sato unpublished cDNA li... 168 4e-040
gb|BJ472926.1|BJ472926 BJ472926 K. Sato unpublished cDNA li... 168 4e-040
gb|AL505004.1|AL505004 AL505004 Hordeum vulgare Barke roots... 161 1e-037
gb|AV932388.1|AV932388 AV932388 K. Sato unpublished cDNA li... 155 6e-036
gb|AV934254.1|AV934254 AV934254 K. Sato unpublished cDNA li... 155 6e-036
gb|BJ471912.1|BJ471912 BJ471912 K. Sato unpublished cDNA li... 155 6e-036
gb|AV934255.1|AV934255 AV934255 K. Sato unpublished cDNA li... 149 4e-034
gb|BJ463690.1|BJ463690 BJ463690 K. Sato unpublished cDNA li... 147 2e-033
gb|BJ469356.1|BJ469356 BJ469356 K. Sato unpublished cDNA li... 147 2e-033
gb|BJ469224.1|BJ469224 BJ469224 K. Sato unpublished cDNA li... 143 2e-032
gb|BJ472162.1|BJ472162 BJ472162 K. Sato unpublished cDNA li... 143 2e-032
gb|AV933884.1|AV933884 AV933884 K. Sato unpublished cDNA li... 137 1e-030
gb|AV934053.1|AV934053 AV934053 K. Sato unpublished cDNA li... 137 1e-030
gb|BI952802.1|BI952802 HVSMEm0007M07f Hordeum vulgare green... 131 9e-029
gb|BJ469491.1|BJ469491 BJ469491 K. Sato unpublished cDNA li... 125 6e-027
gb|AV925741.1|AV925741 AV925741 K. Sato unpublished cDNA li... 121 9e-026
gb|AV923683.1|AV923683 AV923683 K. Sato unpublished cDNA li... 111 8e-023
gb|AV925742.1|AV925742 AV925742 K. Sato unpublished cDNA li... 111 8e-023
gb|AV927221.1|AV927221 AV927221 K. Sato unpublished cDNA li... 109 3e-022
gb|AV930881.1|AV930881 AV930881 K. Sato unpublished cDNA li... 109 3e-022
gb|AV932206.1|AV932206 AV932206 K. Sato unpublished cDNA li... 109 3e-022
gb|AV934754.1|AV934754 AV934754 K. Sato unpublished cDNA li... 109 3e-022
gb|AV935049.1|AV935049 AV935049 K. Sato unpublished cDNA li... 109 3e-022
gb|AV935084.1|AV935084 AV935084 K. Sato unpublished cDNA li... 109 3e-022
gb|AV935252.1|AV935252 AV935252 K. Sato unpublished cDNA li... 109 3e-022
gb|AV935698.1|AV935698 AV935698 K. Sato unpublished cDNA li... 109 3e-022
gb|AV935854.1|AV935854 AV935854 K. Sato unpublished cDNA li... 109 3e-022
gb|AV936007.1|AV936007 AV936007 K. Sato unpublished cDNA li... 109 3e-022
gb|AV936119.1|AV936119 AV936119 K. Sato unpublished cDNA li... 109 3e-022
gb|AV936325.1|AV936325 AV936325 K. Sato unpublished cDNA li... 109 3e-022
gb|AV936971.1|AV936971 AV936971 K. Sato unpublished cDNA li... 109 3e-022
gb|AV936995.1|AV936995 AV936995 K. Sato unpublished cDNA li... 109 3e-022
gb|AV937220.1|AV937220 AV937220 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ467860.1|BJ467860 BJ467860 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ469495.1|BJ469495 BJ469495 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ470411.1|BJ470411 BJ470411 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ470989.1|BJ470989 BJ470989 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ471634.1|BJ471634 BJ471634 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ471814.1|BJ471814 BJ471814 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ472268.1|BJ472268 BJ472268 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ472301.1|BJ472301 BJ472301 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ473460.1|BJ473460 BJ473460 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ474231.1|BJ474231 BJ474231 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ474483.1|BJ474483 BJ474483 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ474750.1|BJ474750 BJ474750 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ474903.1|BJ474903 BJ474903 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ475829.1|BJ475829 BJ475829 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ476180.1|BJ476180 BJ476180 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ476297.1|BJ476297 BJ476297 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ476598.1|BJ476598 BJ476598 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ476629.1|BJ476629 BJ476629 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ476741.1|BJ476741 BJ476741 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ476943.1|BJ476943 BJ476943 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ477018.1|BJ477018 BJ477018 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ477090.1|BJ477090 BJ477090 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ477203.1|BJ477203 BJ477203 K. Sato unpublished cDNA li... 109 3e-022
gb|BJ477292.1|BJ477292 BJ477292 K. Sato unpublished cDNA li... 109 3e-022
gb|AV932172.1|AV932172 AV932172 K. Sato unpublished cDNA li... 105 5e-021
gb|BJ474568.1|BJ474568 BJ474568 K. Sato unpublished cDNA li... 105 5e-021
gb|AV936305.1|AV936305 AV936305 K. Sato unpublished cDNA li... 103 2e-020
gb|AV936972.1|AV936972 AV936972 K. Sato unpublished cDNA li... 103 2e-020
gb|BQ756791.1|BQ756791 EBem09_SQ003_M05_R embryo, 1 Day ger... 103 2e-020
gb|AF210723.1|AF210723 Hordeum vulgare variety Steptoe sucr... 103 2e-020
gb|BJ469399.1|BJ469399 BJ469399 K. Sato unpublished cDNA li... 101 8e-020
gb|BJ472753.1|BJ472753 BJ472753 K. Sato unpublished cDNA li... 101 8e-020
gb|BJ469577.1|BJ469577 BJ469577 K. Sato unpublished cDNA li... 100 3e-019
gb|BJ475563.1|BJ475563 BJ475563 K. Sato unpublished cDNA li... 100 3e-019
gb|CA020832.1|CA020832 HZ37P12r HZ Hordeum vulgare subsp. v... 100 3e-019
gb|AV934742.1|AV934742 AV934742 K. Sato unpublished cDNA li... 98 1e-018
gb|BF628700.2|BF628700 HVSMEb0007E05f Hordeum vulgare seedl... 96 5e-018
gb|BF254647.2|BF254647 HVSMEf0004K01f Hordeum vulgare seedl... 96 5e-018
gb|BF259635.2|BF259635 HVSMEf0019N16f Hordeum vulgare seedl... 96 5e-018
gb|BG343198.2|BG343198 HVSMEg0005B02f Hordeum vulgare pre-a... 96 5e-018
gb|BG344005.2|BG344005 HVSMEg0007F22f Hordeum vulgare pre-a... 96 5e-018
gb|AV930882.1|AV930882 AV930882 K. Sato unpublished cDNA li... 96 5e-018
gb|CA021289.1|CA021289 HZ39K13r HZ Hordeum vulgare subsp. v... 96 5e-018
gb|CA022691.1|CA022691 HZ44B09r HZ Hordeum vulgare subsp. v... 96 5e-018
gb|CA025842.1|CA025842 HZ53E21r HZ Hordeum vulgare subsp. v... 96 5e-018
gb|AF210722.1|AF210722 Hordeum vulgare variety Morex sucros... 96 5e-018
emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for s... 96 5e-018
gb|BG299948.1|BG299948 HVSMEa0022K05f Hordeum vulgare seedl... 94 2e-017
gb|BJ473032.1|BJ473032 BJ473032 K. Sato unpublished cDNA li... 92 8e-017
gb|AL507193.1|AL507193 AL507193 Hordeum vulgare Barke devel... 88 1e-015
gb|BG301302.1|BG301302 HVSMEb0020J07f Hordeum vulgare seedl... 88 1e-015
gb|BM371634.2|BM371634 EBma08_SQ003_H01_R maternal, 28 DPA,... 88 1e-015
emb|A48280.1| Sequence 1 from Patent WO9601904 88 1e-015
emb|X83233.1|HVSF6FT Hordeum vulgare mRNA for sucrose:fruct... 88 1e-015
gb|AL503440.1|AL503440 AL503440 Hordeum vulgare Barke roots... 86 5e-015
gb|BM816244.1|BM816244 HB106H10_SK.ab1 HB Hordeum vulgare s... 86 5e-015
gb|BM816245.1|BM816245 HB106H11_SK.ab1 HB Hordeum vulgare s... 86 5e-015
gb|BU994370.1|BU994370 HM06N08r HM Hordeum vulgare subsp. v... 86 5e-015
gb|CA020694.1|CA020694 HZ37D06r HZ Hordeum vulgare subsp. v... 86 5e-015
gb|CK122199.1|CK122199 BES1824102c17 BES1824 Hordeum vulgar... 86 5e-015
emb|AJ534447.1|HVU534447 Hordeum vulgare mRNA for apoplasti... 86 5e-015
gb|AL505748.1|AL505748 AL505748 Hordeum vulgare Barke roots... 84 2e-014
gb|BF623751.2|BF623751 HVSMEa0005I05f Hordeum vulgare seedl... 84 2e-014
gb|BF259702.3|BF259702 HVSMEf0020A14f Hordeum vulgare seedl... 84 2e-014
gb|BF267660.3|BF267660 HV_CEa0018I16f Hordeum vulgare seedl... 84 2e-014
gb|AV924971.1|AV924971 AV924971 K. Sato unpublished cDNA li... 84 2e-014
gb|AV924972.1|AV924972 AV924972 K. Sato unpublished cDNA li... 84 2e-014
gb|BJ476264.1|BJ476264 BJ476264 K. Sato unpublished cDNA li... 84 2e-014
gb|BJ477343.1|BJ477343 BJ477343 K. Sato unpublished cDNA li... 84 2e-014
gb|BQ468963.1|BQ468963 HM02P04r HM Hordeum vulgare subsp. v... 84 2e-014
gb|BQ764136.1|BQ764136 EBro03_SQ006_J10_R root, 3 week, wat... 84 2e-014
gb|BG344434.1|BG344434 HVSMEg0009E05f Hordeum vulgare pre-a... 82 8e-014
gb|BI958333.1|BI958333 HVSMEn0014H06f Hordeum vulgare rachi... 82 8e-014
gb|BQ762965.1|BQ762965 EBro02_SQ006_O16_R root, 3 week, hyd... 82 8e-014
gb|BF258776.2|BF258776 HVSMEf0016K09f Hordeum vulgare seedl... 80 3e-013
gb|BJ452192.1|BJ452192 BJ452192 K. Sato unpublished cDNA li... 80 3e-013
gb|BJ474427.1|BJ474427 BJ474427 K. Sato unpublished cDNA li... 78 1e-012
gb|BG417552.2|BG417552 HVSMEk0018A17f Hordeum vulgare testa... 76 5e-012
gb|BF255430.3|BF255430 HVSMEf0006N10f Hordeum vulgare seedl... 74 2e-011
gb|BJ474697.1|BJ474697 BJ474697 K. Sato unpublished cDNA li... 74 2e-011
gb|AV932645.1|AV932645 AV932645 K. Sato unpublished cDNA li... 72 7e-011
gb|CA002321.1|CA002321 HS07C10r HS Hordeum vulgare subsp. v... 72 7e-011
gb|CA018370.1|CA018370 HV08G21r HV Hordeum vulgare subsp. v... 72 7e-011
gb|CA028144.1|CA028144 HZ61C03r HZ Hordeum vulgare subsp. v... 72 7e-011
gb|AV922663.1|AV922663 AV922663 K. Sato unpublished cDNA li... 70 3e-010
gb|AV932872.1|AV932872 AV932872 K. Sato unpublished cDNA li... 70 3e-010
gb|AV933211.1|AV933211 AV933211 K. Sato unpublished cDNA li... 70 3e-010
gb|AV933284.1|AV933284 AV933284 K. Sato unpublished cDNA li... 70 3e-010
gb|AV934877.1|AV934877 AV934877 K. Sato unpublished cDNA li... 70 3e-010
gb|AV935016.1|AV935016 AV935016 K. Sato unpublished cDNA li... 70 3e-010
gb|AV935087.1|AV935087 AV935087 K. Sato unpublished cDNA li... 70 3e-010
gb|AV935246.1|AV935246 AV935246 K. Sato unpublished cDNA li... 70 3e-010
gb|AV935359.1|AV935359 AV935359 K. Sato unpublished cDNA li... 70 3e-010
gb|AV935509.1|AV935509 AV935509 K. Sato unpublished cDNA li... 70 3e-010
gb|AV935672.1|AV935672 AV935672 K. Sato unpublished cDNA li... 70 3e-010
gb|AV935725.1|AV935725 AV935725 K. Sato unpublished cDNA li... 70 3e-010
gb|AV936509.1|AV936509 AV936509 K. Sato unpublished cDNA li... 70 3e-010
gb|AV936510.1|AV936510 AV936510 K. Sato unpublished cDNA li... 70 3e-010
gb|AV937246.1|AV937246 AV937246 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ470625.1|BJ470625 BJ470625 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ470717.1|BJ470717 BJ470717 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ471797.1|BJ471797 BJ471797 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ471988.1|BJ471988 BJ471988 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ472283.1|BJ472283 BJ472283 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ474661.1|BJ474661 BJ474661 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ474805.1|BJ474805 BJ474805 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ475438.1|BJ475438 BJ475438 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ475524.1|BJ475524 BJ475524 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ475754.1|BJ475754 BJ475754 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ476280.1|BJ476280 BJ476280 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ476723.1|BJ476723 BJ476723 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ476961.1|BJ476961 BJ476961 K. Sato unpublished cDNA li... 70 3e-010
gb|BJ476981.1|BJ476981 BJ476981 K. Sato unpublished cDNA li... 70 3e-010
gb|CA027835.1|CA027835 HZ60C23r HZ Hordeum vulgare subsp. v... 70 3e-010
gb|BE195964.2|BE195964 HVSMEh0090P17f Hordeum vulgare 5-45 ... 68 1e-009
gb|BJ469875.1|BJ469875 BJ469875 K. Sato unpublished cDNA li... 68 1e-009
gb|BJ472648.1|BJ472648 BJ472648 K. Sato unpublished cDNA li... 68 1e-009
gb|BI958005.1|BI958005 HVSMEn0012N19f Hordeum vulgare rachi... 66 5e-009
gb|BE558965.2|BE558965 HV_CEb0020P02f Hordeum vulgare seedl... 66 5e-009
gb|BM372859.1|BM372859 EBma04_SQ002_D03_R maternal, 10 DPA,... 66 5e-009
gb|BJ459746.1|BJ459746 BJ459746 K. Sato unpublished cDNA li... 66 5e-009
gb|CA022244.1|CA022244 HZ42J03r HZ Hordeum vulgare subsp. v... 64 2e-008
gb|CD663390.1|CD663390 UCRHV18_05bd01_b1 Drought-stressed D... 64 2e-008
gb|AL509704.1|AL509704 AL509704 Hordeum vulgare Barke devel... 62 7e-008
gb|BF620139.2|BF620139 HVSMEc0018E21f Hordeum vulgare seedl... 62 7e-008
gb|BE060860.3|BE060860 HVSMEg0013J24f Hordeum vulgare pre-a... 62 7e-008
gb|BJ475156.1|BJ475156 BJ475156 K. Sato unpublished cDNA li... 62 7e-008
gb|BQ764647.1|BQ764647 EBca01_SQ004_A18_R carpel, pre-anthe... 62 7e-008
gb|AL500153.1|AL500153 AL500153 Hordeum vulgare Barke etiol... 60 3e-007
gb|AL503494.1|AL503494 AL503494 Hordeum vulgare Barke roots... 60 3e-007
gb|BG344745.2|BG344745 HVSMEg0015K21f Hordeum vulgare pre-a... 60 3e-007
gb|AV914741.1|AV914741 AV914741 K. Sato unpublished cDNA li... 60 3e-007
gb|AV933843.1|AV933843 AV933843 K. Sato unpublished cDNA li... 60 3e-007
gb|BJ472799.1|BJ472799 BJ472799 K. Sato unpublished cDNA li... 60 3e-007
gb|BQ462677.1|BQ462677 HI01K21T HI Hordeum vulgare subsp. v... 60 3e-007
gb|BM097221.2|BM097221 EBpi07_SQ002_M12_R pistil, 12 DPA, n... 60 3e-007
gb|BI778837.2|BI778837 EBro01_SQ001_L05_R root, 3 week, hyd... 60 3e-007
gb|BQ765115.1|BQ765115 EBca01_SQ005_H20_R carpel, pre-anthe... 60 3e-007
gb|BQ767844.1|BQ767844 EBro08_SQ010_B04_R root, 3 week, dro... 60 3e-007
gb|CA003664.1|CA003664 HS15D02r HS Hordeum vulgare subsp. v... 60 3e-007
gb|BF255284.2|BF255284 HVSMEf0006H05f Hordeum vulgare seedl... 58 1e-006
gb|BF257665.2|BF257665 HVSMEf0013I03f Hordeum vulgare seedl... 58 1e-006
gb|BG343268.2|BG343268 HVSMEg0005E09f Hordeum vulgare pre-a... 58 1e-006
gb|CA025895.1|CA025895 HZ53H06r HZ Hordeum vulgare subsp. v... 58 1e-006
gb|AV915528.1|AV915528 AV915528 K. Sato unpublished cDNA li... 56 4e-006
gb|AV920627.1|AV920627 AV920627 K. Sato unpublished cDNA li... 56 4e-006
gb|BJ472819.1|BJ472819 BJ472819 K. Sato unpublished cDNA li... 56 4e-006
gb|BE216014.3|BE216014 HV_CEb0009C02f Hordeum vulgare seedl... 54 2e-005
gb|BJ448234.1|BJ448234 BJ448234 K. Sato unpublished cDNA li... 54 2e-005
gb|BJ448235.1|BJ448235 BJ448235 K. Sato unpublished cDNA li... 54 2e-005
gb|BJ455956.1|BJ455956 BJ455956 K. Sato unpublished cDNA li... 54 2e-005
gb|BJ455957.1|BJ455957 BJ455957 K. Sato unpublished cDNA li... 54 2e-005
gb|CV054610.1|CV054610 BNEL111d12 Barley EST endosperm libr... 54 2e-005
gb|CV056371.1|CV056371 BNEL17A10 Barley EST endosperm libra... 54 2e-005
gb|CV056468.1|CV056468 BNEL18A9 Barley EST endosperm librar... 54 2e-005
gb|CV061197.1|CV061197 BNEL66a2 Barley EST endosperm librar... 54 2e-005
gb|CV062566.1|CV062566 BNEL80e11 Barley EST endosperm libra... 54 2e-005
gb|AL500905.1|AL500905 AL500905 Hordeum vulgare Barke roots... 52 7e-005
gb|AL509208.1|AL509208 AL509208 Hordeum vulgare Barke devel... 52 7e-005
gb|AJ433510.1|AJ433510 AJ433510 S00002 Hordeum vulgare subs... 52 7e-005
gb|BQ660256.1|BQ660256 HI01K21w HI Hordeum vulgare subsp. v... 52 7e-005
gb|CA000712.1|CA000712 HS07C10u HS Hordeum vulgare subsp. v... 52 7e-005
gb|CA022834.1|CA022834 HZ44H21r HZ Hordeum vulgare subsp. v... 52 7e-005
gb|CV060701.1|CV060701 BNEL60b8 Barley EST endosperm librar... 52 7e-005
gb|BG415058.2|BG415058 HVSMEk0004O24f Hordeum vulgare testa... 50 3e-004
gb|AV932245.1|AV932245 AV932245 K. Sato unpublished cDNA li... 50 3e-004
gb|BJ469030.1|BJ469030 BJ469030 K. Sato unpublished cDNA li... 50 3e-004
gb|BM100630.2|BM100630 EBma01_SQ005_M12_R maternal, 4 DPA, ... 50 3e-004
gb|BG418570.2|BG418570 HVSMEk0023D12f Hordeum vulgare testa... 46 0.004
gb|AV911925.1|AV911925 AV911925 K. Sato unpublished cDNA li... 46 0.004
gb|BM815959.1|BM815959 HC05G06_T3.ab1 HC Hordeum vulgare su... 46 0.004
gb|BJ447717.1|BJ447717 BJ447717 K. Sato unpublished cDNA li... 46 0.004
gb|BJ455466.1|BJ455466 BJ455466 K. Sato unpublished cDNA li... 46 0.004
gb|BG418156.1|BG418156 HVSMEk0021K05f Hordeum vulgare testa... 44 0.017
gb|BJ464851.1|BJ464851 BJ464851 K. Sato unpublished cDNA li... 44 0.017
gb|BJ470453.1|BJ470453 BJ470453 K. Sato unpublished cDNA li... 44 0.017
gb|BM443117.2|BM443117 EBro02_SQ002_K04_R root, 3 week, hyd... 44 0.017
gb|BQ753755.1|BQ753755 EBca01_SQ001_F10_R carpel, pre-anthe... 44 0.017
gb|BU978136.1|BU978136 HA12K07r HA Hordeum vulgare subsp. v... 44 0.017
gb|BU979341.1|BU979341 HA15N12r HA Hordeum vulgare subsp. v... 44 0.017
gb|CA023264.1|CA023264 HZ45L10r HZ Hordeum vulgare subsp. v... 44 0.017
gb|CV061217.1|CV061217 BNEL66c2 Barley EST endosperm librar... 44 0.017
gb|CK123075.1|CK123075 BES1824102a14 BES1824 Hordeum vulgar... 44 0.017
gb|CK123253.1|CK123253 BES1824102o14 BES1824 Hordeum vulgar... 44 0.017
gb|BU997744.1|BU997744 HI08O06r HI Hordeum vulgare subsp. v... 42 0.065
gb|AV919839.1|AV919839 AV919839 K. Sato unpublished cDNA li... 40 0.26
gb|BJ465229.1|BJ465229 BJ465229 K. Sato unpublished cDNA li... 40 0.26
gb|BJ468455.1|BJ468455 BJ468455 K. Sato unpublished cDNA li... 40 0.26
gb|CA003980.1|CA003980 HS16D02r HS Hordeum vulgare subsp. v... 40 0.26
gb|CK122716.1|CK122716 BES1824105i23 BES1824 Hordeum vulgar... 40 0.26
gb|CK123328.1|CK123328 BES1824103f17 BES1824 Hordeum vulgar... 40 0.26
>gb|AV932241.1|AV932241 AV932241 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2n09 5', mRNA sequence
Length = 550
Score = 224 bits (113), Expect = 8e-057
Identities = 257/305 (84%)
Strand = Plus / Minus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||||||||| || || ||||| ||| | ||| |||||||||| |||||||||| ||||
Sbjct: 331 gcctcgatgtcgagttgagtggcacggtgaaggctgagcgggaagacggagccgtggtcg 272
Query: 922 atggtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggc 981
||||||| | || ||||| |||||||||||| || ||||| ||||||||| ||| |||
Sbjct: 271 atggtgacccggccgaggttggtggagttggtccggagcgtttccacctcccgcaccggc 212
Query: 982 cactgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgc 1041
||||| || |||||||| ||||||||||||||||| | ||||||||| ||||| |||
Sbjct: 211 cactgtaggaggttgcttcccgtcttggtgtccagcaccaccgtccgagggatcgactgg 152
Query: 1042 agcgacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccc 1101
||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| |||
Sbjct: 151 agcgacgcccatcccttggcgacgtcggcgcgctcagagtcggtctcgccgacccacccc 92
Query: 1102 cacagcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccc 1161
|| ||||| || || ||| || || || ||||||||||| |||||||||||||| |||
Sbjct: 91 catagcacccgccgcttctttgctggatcatagaacgtcttagacgcgtagaactttccc 32
Query: 1162 cagtc 1166
|||||
Sbjct: 31 cagtc 27
Score = 50.1 bits (25), Expect = 3e-004
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 460 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 401
Query: 793 gtgctgcagttgtagcccacgtccgcctcgttg 825
||||| || ||||||| ||||| |||||||||
Sbjct: 400 gtgctacaattgtagcggacgtcggcctcgttg 368
>gb|AV933260.1|AV933260 AV933260 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6a11 5', mRNA sequence
Length = 583
Score = 224 bits (113), Expect = 8e-057
Identities = 257/305 (84%)
Strand = Plus / Minus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||||||||| || || ||||| ||| | ||| |||||||||| |||||||||| ||||
Sbjct: 331 gcctcgatgtcgagttgagtggcacggtgaaggctgagcgggaagacggagccgtggtcg 272
Query: 922 atggtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggc 981
||||||| | || ||||| |||||||||||| || ||||| ||||||||| ||| |||
Sbjct: 271 atggtgacccggccgaggttggtggagttggtccggagcgtttccacctcccgcaccggc 212
Query: 982 cactgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgc 1041
||||| || |||||||| ||||||||||||||||| | ||||||||| ||||| |||
Sbjct: 211 cactgtaggaggttgcttcccgtcttggtgtccagcaccaccgtccgagggatcgactgg 152
Query: 1042 agcgacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccc 1101
||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| |||
Sbjct: 151 agcgacgcccatcccttggcgacgtcggcgcgctcagagtcggtctcgccgacccacccc 92
Query: 1102 cacagcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccc 1161
|| ||||| || || ||| || || || ||||||||||| |||||||||||||| |||
Sbjct: 91 catagcacccgccgcttctttgctggatcatagaacgtcttagacgcgtagaactttccc 32
Query: 1162 cagtc 1166
|||||
Sbjct: 31 cagtc 27
Score = 50.1 bits (25), Expect = 3e-004
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 460 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 401
Query: 793 gtgctgcagttgtagcccacgtccgcctcgttg 825
||||| || ||||||| ||||| |||||||||
Sbjct: 400 gtgctacaattgtagcggacgtcggcctcgttg 368
>gb|CA021243.1|CA021243 HZ39I13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39I13
5-PRIME, mRNA sequence
Length = 493
Score = 224 bits (113), Expect = 8e-057
Identities = 257/305 (84%)
Strand = Plus / Minus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||||||||| || || ||||| ||| | ||| |||||||||| |||||||||| ||||
Sbjct: 464 gcctcgatgtcgagttgagtggcacggtgaaggctgagcgggaagacggagccgtggtcg 405
Query: 922 atggtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggc 981
||||||| | || ||||| |||||||||||| || ||||| ||||||||| ||| |||
Sbjct: 404 atggtgacccggccgaggttggtggagttggtccggagcgtttccacctcccgcaccggc 345
Query: 982 cactgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgc 1041
||||| || |||||||| ||||||||||||||||| | ||||||||| ||||| |||
Sbjct: 344 cactgtaggaggttgcttcccgtcttggtgtccagcaccaccgtccgagggatcgactgg 285
Query: 1042 agcgacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccc 1101
||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| |||
Sbjct: 284 agcgacgcccatcccttggcgacgtcggcgcgctcagagtcggtctcgccgacccacccc 225
Query: 1102 cacagcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccc 1161
|| ||||| || || ||| || || || ||||||||||| |||||||||||||| |||
Sbjct: 224 catagcacccgccgcttctttgctggatcatagaacgtcttagacgcgtagaactttccc 165
Query: 1162 cagtc 1166
|||||
Sbjct: 164 cagtc 160
Score = 44.1 bits (22), Expect = 0.017
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 1225 gccgcgtcgtacctccccagcgcgtagtagtcgtggcggtcgtcgtccatgctggccttc 1284
||||||||||| ||||| ||| ||||||||||| ||||| |||||| ||| |||||
Sbjct: 101 gccgcgtcgtattgccccaacgcatagtagtcgtgccggtcatcgtccgagctctccttc 42
Query: 1285 atgacgtgca 1294
|| |||||||
Sbjct: 41 atcacgtgca 32
>gb|BJ470753.1|BJ470753 BJ470753 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal26h03 5', mRNA sequence
Length = 604
Score = 192 bits (97), Expect = 3e-047
Identities = 205/241 (85%)
Strand = Plus / Minus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||||||||| || || ||||| ||| | ||| |||||||||| |||||||||| ||||
Sbjct: 242 gcctcgatgtcgagttgagtggcacggtgaaggctgagcgggaagacggagccgtggtcg 183
Query: 922 atggtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggc 981
||||||| | || ||||| |||||||||||| || ||||| ||||||||| ||| |||
Sbjct: 182 atggtgacccggccgaggttggtggagttggtccggagcgtttccacctcccgcaccggc 123
Query: 982 cactgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgc 1041
||||| || |||||||| ||||||||||||||||| | ||||||||| ||||| |||
Sbjct: 122 cactgtaggaggttgcttcccgtcttggtgtccagcaccaccgtccgagggatcgactgg 63
Query: 1042 agcgacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccc 1101
||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| |||
Sbjct: 62 agcgacgcccatcccttggcgacgtcggcgcgctcagagtcggtctcgccgacccacccc 3
Query: 1102 c 1102
|
Sbjct: 2 c 2
Score = 50.1 bits (25), Expect = 3e-004
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 371 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 312
Query: 793 gtgctgcagttgtagcccacgtccgcctcgttg 825
||||| || ||||||| ||||| |||||||||
Sbjct: 311 gtgctacaattgtagcggacgtcggcctcgttg 279
Score = 44.1 bits (22), Expect = 0.017
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 520 aagctctcgacgatggagtggtcgacgagcaccc 553
|||||||| |||||||||||||| || |||||||
Sbjct: 590 aagctctctacgatggagtggtccaccagcaccc 557
>gb|AV932394.1|AV932394 AV932394 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3h03 5', mRNA sequence
Length = 617
Score = 180 bits (91), Expect = 1e-043
Identities = 265/323 (82%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 449 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 390
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 389 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 330
Query: 985 tgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgcagc 1044
|| || |||||||| || |||||| | || || | ||||||||| ||| | ||| ||
Sbjct: 329 tgcaggaggttgctccctgtcttgttatctagcaccaccgtccgaggggtcgactggagg 270
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccac 1104
|| ||||||||||| | ||||| ||| |||| ||||| ||||| |||||||| ||||||
Sbjct: 269 gaggcccatcccttagcaacgtcagcgtgctcggagtcggtctcaccgacccacccccac 210
Query: 1105 agcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccccag 1164
|||||||| || ||| || || |||||||| |||||||| ||||||||||| ||||||
Sbjct: 209 agcacgcgccgcttctttgctggatcgtagaaagtcttggatgcgtagaactttccccag 150
Query: 1165 tcgtagcgcaggccgatgccgac 1187
||||| | ||| || ||||||||
Sbjct: 149 tcgtacctcagcccaatgccgac 127
Score = 67.9 bits (34), Expect = 1e-009
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1227 cgcgtcgtacctccccagcgcgtagtagtcgtggcggtcgtcgtcc 1272
|||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 87 cgcgtcgtaccttcccagcgcgtagtagtcgtgccggtcatcgtcc 42
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 566 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 507
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 506 ccgacatccgc 496
>gb|AV933740.1|AV933740 AV933740 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal8j03 5', mRNA sequence
Length = 579
Score = 180 bits (91), Expect = 1e-043
Identities = 265/323 (82%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 439 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 380
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 379 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 320
Query: 985 tgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgcagc 1044
|| || |||||||| || |||||| | || || | ||||||||| ||| | ||| ||
Sbjct: 319 tgcaggaggttgctccctgtcttgttatctagcaccaccgtccgaggggtcgactggagg 260
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccac 1104
|| ||||||||||| | ||||| ||| |||| ||||| ||||| |||||||| ||||||
Sbjct: 259 gaggcccatcccttagcaacgtcagcgtgctcggagtcggtctcaccgacccacccccac 200
Query: 1105 agcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccccag 1164
|||||||| || ||| || || |||||||| |||||||| ||||||||||| ||||||
Sbjct: 199 agcacgcgccgcttctttgctggatcgtagaaagtcttggatgcgtagaactttccccag 140
Query: 1165 tcgtagcgcaggccgatgccgac 1187
||||| | ||| || ||||||||
Sbjct: 139 tcgtacctcagcccaatgccgac 117
Score = 67.9 bits (34), Expect = 1e-009
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1227 cgcgtcgtacctccccagcgcgtagtagtcgtggcggtcgtcgtcc 1272
|||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 77 cgcgtcgtaccttcccagcgcgtagtagtcgtgccggtcatcgtcc 32
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 556 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 497
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 496 ccgacatccgc 486
>gb|AV933741.1|AV933741 AV933741 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal8j04 5', mRNA sequence
Length = 628
Score = 180 bits (91), Expect = 1e-043
Identities = 265/323 (82%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 407 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 348
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 347 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 288
Query: 985 tgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgcagc 1044
|| || |||||||| || |||||| | || || | ||||||||| ||| | ||| ||
Sbjct: 287 tgcaggaggttgctccctgtcttgttatctagcaccaccgtccgaggggtcgactggagg 228
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccac 1104
|| ||||||||||| | ||||| ||| |||| ||||| ||||| |||||||| ||||||
Sbjct: 227 gaggcccatcccttagcaacgtcagcgtgctcggagtcggtctcaccgacccacccccac 168
Query: 1105 agcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccccag 1164
|||||||| || ||| || || |||||||| |||||||| ||||||||||| ||||||
Sbjct: 167 agcacgcgccgcttctttgctggatcgtagaaagtcttggatgcgtagaactttccccag 108
Query: 1165 tcgtagcgcaggccgatgccgac 1187
||||| | ||| || ||||||||
Sbjct: 107 tcgtacctcagcccaatgccgac 85
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 524 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 465
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 464 ccgacatccgc 454
Score = 60.0 bits (30), Expect = 3e-007
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 1227 cgcgtcgtacctccccagcgcgtagtagtcgtggcggtcgtcgtc 1271
|||||||||||| ||||||||||||||||||| ||||| |||||
Sbjct: 45 cgcgtcgtaccttcccagcgcgtagtagtcgtnccggtcatcgtc 1
>gb|AV933837.1|AV933837 AV933837 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal9n05 5', mRNA sequence
Length = 661
Score = 180 bits (91), Expect = 1e-043
Identities = 265/323 (82%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 520 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 461
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 460 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 401
Query: 985 tgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgcagc 1044
|| || |||||||| || |||||| | || || | ||||||||| ||| | ||| ||
Sbjct: 400 tgcaggaggttgctccctgtcttgttatctagcaccaccgtccgaggggtcgactggagg 341
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccac 1104
|| ||||||||||| | ||||| ||| |||| ||||| ||||| |||||||| ||||||
Sbjct: 340 gaggcccatcccttagcaacgtcagcgtgctcggagtcggtctcaccgacccacccccac 281
Query: 1105 agcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccccag 1164
|||||||| || ||| || || |||||||| |||||||| ||||||||||| ||||||
Sbjct: 280 agcacgcgccgcttctttgctggatcgtagaaagtcttggatgcgtagaactttccccag 221
Query: 1165 tcgtagcgcaggccgatgccgac 1187
||||| | ||| || ||||||||
Sbjct: 220 tcgtacctcagcccaatgccgac 198
Score = 67.9 bits (34), Expect = 1e-009
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1227 cgcgtcgtacctccccagcgcgtagtagtcgtggcggtcgtcgtcc 1272
|||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 158 cgcgtcgtaccttcccagcgcgtagtagtcgtgccggtcatcgtcc 113
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 637 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 578
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 577 ccgacatccgc 567
>gb|AV934074.1|AV934074 AV934074 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baalo20 5', mRNA sequence
Length = 623
Score = 180 bits (91), Expect = 1e-043
Identities = 265/323 (82%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 509 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 450
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 449 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 390
Query: 985 tgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgcagc 1044
|| || |||||||| || |||||| | || || | ||||||||| ||| | ||| ||
Sbjct: 389 tgcaggaggttgctccctgtcttgttatctagcaccaccgtccgaggggtcgactggagg 330
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccac 1104
|| ||||||||||| | ||||| ||| |||| ||||| ||||| |||||||| ||||||
Sbjct: 329 gaggcccatcccttagcaacgtcagcgtgctcggagtcggtctcaccgacccacccccac 270
Query: 1105 agcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccccag 1164
|||||||| || ||| || || |||||||| |||||||| ||||||||||| ||||||
Sbjct: 269 agcacgcgccgcttctttgctggatcgtagaaagtcttggatgcgtagaactttccccag 210
Query: 1165 tcgtagcgcaggccgatgccgac 1187
||||| | ||| || ||||||||
Sbjct: 209 tcgtacctcagcccaatgccgac 187
Score = 67.9 bits (34), Expect = 1e-009
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1227 cgcgtcgtacctccccagcgcgtagtagtcgtggcggtcgtcgtcc 1272
|||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 146 cgcgtcgtaccttcccagcgcgtagtagtcgtgccggtcatcgtcc 101
Score = 56.0 bits (28), Expect = 4e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 751 ccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtagccc 810
|||||||| || |||| ||| || || || ||||| |||||||||||||||||||||||
Sbjct: 623 ccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtagccg 564
Query: 811 acgtccgc 818
|| |||||
Sbjct: 563 acatccgc 556
>gb|BJ469279.1|BJ469279 BJ469279 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13p22 5', mRNA sequence
Length = 467
Score = 180 bits (91), Expect = 1e-043
Identities = 265/323 (82%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 439 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 380
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 379 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 320
Query: 985 tgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgcagc 1044
|| || |||||||| || |||||| | || || | ||||||||| ||| | ||| ||
Sbjct: 319 tgcaggaggttgctccctgtcttgttatctagcaccaccgtccgaggggtcgactggagg 260
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccac 1104
|| ||||||||||| | ||||| ||| |||| ||||| ||||| |||||||| ||||||
Sbjct: 259 gaggcccatcccttagcaacgtcagcgtgctcggagtcggtctcaccgacccacccccac 200
Query: 1105 agcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccccag 1164
|||||||| || ||| || || |||||||| |||||||| ||||||||||| ||||||
Sbjct: 199 agcacgcgccgcttctttgctggatcgtagaaagtcttggatgcgtagaactttccccag 140
Query: 1165 tcgtagcgcaggccgatgccgac 1187
||||| | ||| || ||||||||
Sbjct: 139 tcgtacctcagcccaatgccgac 117
Score = 67.9 bits (34), Expect = 1e-009
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1227 cgcgtcgtacctccccagcgcgtagtagtcgtggcggtcgtcgtcc 1272
|||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 77 cgcgtcgtaccttcccagcgcgtagtagtcgtgccggtcatcgtcc 32
>gb|BJ472857.1|BJ472857 BJ472857 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39f18 5', mRNA sequence
Length = 656
Score = 180 bits (91), Expect = 1e-043
Identities = 265/323 (82%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 439 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 380
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 379 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 320
Query: 985 tgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgcagc 1044
|| || |||||||| || |||||| | || || | ||||||||| ||| | ||| ||
Sbjct: 319 tgcaggaggttgctccctgtcttgttatctagcaccaccgtccgaggggtcgactggagg 260
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccac 1104
|| ||||||||||| | ||||| ||| |||| ||||| ||||| |||||||| ||||||
Sbjct: 259 gaggcccatcccttagcaacgtcagcgtgctcggagtcggtctcaccgacccacccccac 200
Query: 1105 agcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccccag 1164
|||||||| || ||| || || |||||||| |||||||| ||||||||||| ||||||
Sbjct: 199 agcacgcgccgcttctttgctggatcgtagaaagtcttggatgcgtagaactttccccag 140
Query: 1165 tcgtagcgcaggccgatgccgac 1187
||||| | ||| || ||||||||
Sbjct: 139 tcgtacctcagcccaatgccgac 117
Score = 67.9 bits (34), Expect = 1e-009
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1227 cgcgtcgtacctccccagcgcgtagtagtcgtggcggtcgtcgtcc 1272
|||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 77 cgcgtcgtaccttcccagcgcgtagtagtcgtgccggtcatcgtcc 32
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 556 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 497
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 496 ccgacatccgc 486
>gb|BJ470006.1|BJ470006 BJ470006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal14m17 5', mRNA sequence
Length = 471
Score = 178 bits (90), Expect = 4e-043
Identities = 205/242 (84%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||||||||| || || ||||| ||| | ||| |||||||||| |||||||||| ||||
Sbjct: 254 gcctcgatgtcgagttgagtggcacggtgaaggctgagcgggaagacggagccgtggtcg 195
Query: 922 atggtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggc 981
||||||| | || ||||| |||||||||||| || ||||| ||||||||| ||| |||
Sbjct: 194 atggtgacccggccgaggttggtggagttggtccggagcgtttccacctcccgcaccggc 135
Query: 982 cactgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgc 1041
||||| || |||||||| ||||||||||||||||| | ||||||||| ||||| |||
Sbjct: 134 cactgtaggaggttgcttcccgtcttggtgtccagcaccaccgtccgagggatcgactgg 75
Query: 1042 agcgacgcccatcccttggacacgtccgcgcgctccgagtctgt-ctcgccgacccatcc 1100
||||||||||||||||||| ||||| |||||||| ||||| || |||||||||||| ||
Sbjct: 74 agcgacgcccatcccttggcgacgtcggcgcgctcagagtcggtnctcgccgacccaccc 15
Query: 1101 cc 1102
||
Sbjct: 14 cc 13
Score = 50.1 bits (25), Expect = 3e-004
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 383 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 324
Query: 793 gtgctgcagttgtagcccacgtccgcctcgttg 825
||||| || ||||||| ||||| |||||||||
Sbjct: 323 gtgctacaattgtagcggacgtcggcctcgttg 291
>gb|BF254441.2|BF254441 HVSMEf0004A12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0004A12f, mRNA sequence
Length = 855
Score = 176 bits (89), Expect = 2e-042
Identities = 116/125 (92%)
Strand = Plus / Minus
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccac 1104
|||||||||||||||| |||||| |||||||| ||||| |||||||||| ||||||||||
Sbjct: 152 gacgcccatcccttggccacgtcggcgcgctcggagtcggtctcgccgatccatccccac 93
Query: 1105 agcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccccag 1164
|||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 92 agcacgcggcggttcttggcagggtcgtagaaggtcttggacgcgtagaacttgccccag 33
Query: 1165 tcgta 1169
|||||
Sbjct: 32 tcgta 28
Score = 79.8 bits (40), Expect = 3e-013
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 751 ccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtagccc 810
|||||||| || |||||||| ||| ||||||||| |||||||||||||||||||||||
Sbjct: 446 ccgaaggggccgagcgcgccacggttggcggcgccgccgctggtgctgcagttgtagccg 387
Query: 811 acgtccgcctcgttga 826
|| || ||||||||||
Sbjct: 386 acatcagcctcgttga 371
Score = 65.9 bits (33), Expect = 5e-009
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||| ||||| |||||||||||||| ||||| ||| ||||||||| || ||||
Sbjct: 335 gcctcaatgtcgagctgggtggcgcgacggagcgggagagggaacacgctcccagtgtcg 276
Query: 922 atggtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggc 981
|||||| | || | |||||||||||||||| |||| |||||||| | |||| | ||||||
Sbjct: 275 atggtggtaccaccgaggtcggtggagttgatgcggagcgtctcgatctccacgacgggc 216
Query: 982 cactg 986
|||||
Sbjct: 215 cactg 211
>gb|AV933409.1|AV933409 AV933409 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6l17 5', mRNA sequence
Length = 616
Score = 172 bits (87), Expect = 3e-041
Identities = 204/242 (84%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||||||||| || || ||||| ||| | ||| |||||||||| |||||||||| ||||
Sbjct: 253 gcctcgatgtcgagttgagtggcacggtgaaggctgagcgggaagacggagccgtggtcg 194
Query: 922 atggtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggc 981
||||||| | || ||||| |||||||||||| || ||||| ||||||||| ||| |||
Sbjct: 193 atggtgacccggccgaggttggtggagttggtccggagcgtttccacctcccgcaccggc 134
Query: 982 cactgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgc 1041
||||| || |||||||| ||||||||||||||||| | ||||||||| ||||| |||
Sbjct: 133 cactgtaggaggttgcttcccgtcttggtgtccagcaccaccgtccgagggatcgactgg 74
Query: 1042 agcgacgcccatcccttggacacgtccgcgcgctccgagtctgt-ctcgccgacccatcc 1100
||||||||||||||||||| ||||| ||||| || ||||| || |||||||||||| ||
Sbjct: 73 agcgacgcccatcccttggcgacgtcggcgcgntcagagtcggtnctcgccgacccaccc 14
Query: 1101 cc 1102
||
Sbjct: 13 cc 12
Score = 50.1 bits (25), Expect = 3e-004
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 382 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 323
Query: 793 gtgctgcagttgtagcccacgtccgcctcgttg 825
||||| || ||||||| ||||| |||||||||
Sbjct: 322 gtgctacaattgtagcggacgtcggcctcgttg 290
Score = 44.1 bits (22), Expect = 0.017
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 520 aagctctcgacgatggagtggtcgacgagcaccc 553
|||||||| |||||||||||||| || |||||||
Sbjct: 602 aagctctctacgatggagtggtccaccagcaccc 569
>gb|AV933574.1|AV933574 AV933574 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7i06 5', mRNA sequence
Length = 512
Score = 168 bits (85), Expect = 4e-040
Identities = 187/221 (84%)
Strand = Plus / Minus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||||||||| || || ||||| ||| | ||| |||||||||| |||||||||| ||||
Sbjct: 260 gcctcgatgtcgagttgagtggcacggtgaaggctgagcgggaagacggagccgtggtcg 201
Query: 922 atggtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggc 981
||||||| | || ||||| |||||||||||| || ||||| ||||||||| ||| |||
Sbjct: 200 atggtgacccggccgaggttggtggagttggtccggagcgtttccacctcccgcaccggc 141
Query: 982 cactgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgc 1041
||||| || |||||||| ||||||||||||||||| | ||||||||| ||||| |||
Sbjct: 140 cactgtaggaggttgcttcccgtcttggtgtccagcaccaccgtccgagggatcgactgg 81
Query: 1042 agcgacgcccatcccttggacacgtccgcgcgctccgagtc 1082
||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 80 agcgacgcccatcccttggcgacgtcggcgcgctcagagtc 40
Score = 50.1 bits (25), Expect = 3e-004
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 389 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 330
Query: 793 gtgctgcagttgtagcccacgtccgcctcgttg 825
||||| || ||||||| ||||| |||||||||
Sbjct: 329 gtgctacaattgtagcggacgtcggcctcgttg 297
>gb|BJ472926.1|BJ472926 BJ472926 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39m15 5', mRNA sequence
Length = 627
Score = 168 bits (85), Expect = 4e-040
Identities = 187/221 (84%)
Strand = Plus / Minus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||||||||| || || ||||| ||| | ||| |||||||||| |||||||||| ||||
Sbjct: 247 gcctcgatgtcgagttgagtggcacggtgaaggctgagcgggaagacggagccgtggtcg 188
Query: 922 atggtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggc 981
||||||| | || ||||| |||||||||||| || ||||| ||||||||| ||| |||
Sbjct: 187 atggtgacccggccgaggttggtggagttggtccggagcgtttccacctcccgcaccggc 128
Query: 982 cactgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgc 1041
||||| || |||||||| ||||||||||||||||| | ||||||||| ||||| |||
Sbjct: 127 cactgtaggaggttgcttcccgtcttggtgtccagcaccaccgtccgagggatcgactgg 68
Query: 1042 agcgacgcccatcccttggacacgtccgcgcgctccgagtc 1082
||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 67 agcgacgcccatcccttggcgacgtcggcgcgctcagagtc 27
Score = 54.0 bits (27), Expect = 2e-005
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 499 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 553
||||||||||||||| || |||||||| |||||||||||||| || |||||||
Sbjct: 616 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 562
Score = 50.1 bits (25), Expect = 3e-004
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 376 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 317
Query: 793 gtgctgcagttgtagcccacgtccgcctcgttg 825
||||| || ||||||| ||||| |||||||||
Sbjct: 316 gtgctacaattgtagcggacgtcggcctcgttg 284
>gb|AL505004.1|AL505004 AL505004 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07B12V 5', mRNA sequence
Length = 700
Score = 161 bits (81), Expect = 1e-037
Identities = 190/227 (83%)
Strand = Plus / Minus
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccac 1104
|||||||||||||||| ||||| |||||||| ||||| |||| ||||| |||||||| |
Sbjct: 421 gacgcccatcccttggcgacgtcggcgcgctcggagtcggtcttgccgatccatccccnc 362
Query: 1105 agcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgccccag 1164
|||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 361 agcacgcggcggttcttggcggggtcgtagaaggtcttggacgcgtagaacttgccccag 302
Query: 1165 tcgtagcgcaggccgatgccgacgtccctgccggcgtcgatcggcgtccaggcgttggcg 1224
|| || | ||| ||||| || || ||| | | ||||| |||| || | ||||||
Sbjct: 301 tcatacctcagaccgatcccaacatccatctccgcgtctatcgctgtatacttgttggca 242
Query: 1225 gccgcgtcgtacctccccagcgcgtagtagtcgtggcggtcgtcgtc 1271
|| |||||||||||||| |||||||| |||||||||||| ||||||
Sbjct: 241 gcagcgtcgtacctcccgagcgcgtaccagtcgtggcggtngtcgtc 195
Score = 81.8 bits (41), Expect = 8e-014
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||| ||||| |||||||||||||| ||||| ||| ||||||||| ||| ||||
Sbjct: 604 gcctcaatgtcgagctgggtggcgcgacggagcgggagagggaacacgctgccagtgtcg 545
Query: 922 atggtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggc 981
|||||||| || | |||||||||||||||| |||| |||||||| | |||| | ||||||
Sbjct: 544 atggtgataccaccgaggtcggtggagttgatgcggagcgtctcgatctccacgacgggc 485
Query: 982 cactg 986
|||||
Sbjct: 484 cactg 480
Score = 56.0 bits (28), Expect = 4e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1376 cgacggggtagaagtcgatgcactcccacatgccggtgcc 1415
|||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 147 cgacagggtagaagtcaatgcactcccacatgccagtgcc 108
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 787 ccgctggtgctgcagttgtagcc 809
|||||||||||||||||||||||
Sbjct: 682 ccgctggtgctgcagttgtagcc 660
>gb|AV932388.1|AV932388 AV932388 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3g20 5', mRNA sequence
Length = 672
Score = 155 bits (78), Expect = 6e-036
Identities = 240/294 (81%)
Strand = Plus / Minus
Query: 1561 gtggtggggtcgcggaagtccttgggcccgatgcccgggggcgggtacagcaccgggttg 1620
||||||||||| | ||||||||| |||| ||||| |||||||||| ||||||||||
Sbjct: 353 gtggtggggtccctgaagtccttctctccgacacccggtggcgggtacatcaccgggttg 294
Query: 1621 ccctcgtacttggtccagttggtgagcagcgggtcggcgtcgtcggcgggcacggccagg 1680
||| ||||||||||||||| | |||| |||||| | | ||| | ||| | ||| |||
Sbjct: 293 ttctcatacttggtccagttgattagcaacgggtccgaggggtcagtggggaaggcgagg 234
Query: 1681 cactgcacctggacggaggcgttggtggagcccctgtagagcattgcgaggcggccgtcg 1740
|| || |||||||||||||||||||||||||| |||||||||| ||| ||||||||||
Sbjct: 233 cattggacctggacggaggcgttggtggagccggtgtagagcatgacgatgcggccgtcg 174
Query: 1741 gggagcgtggtggcggaccccgtccacacgccgttggtgtcgtaccactggtcgggcacc 1800
|| || ||| ||||| |||| ||| ||||||||| |||||||||||||||| || |
Sbjct: 173 ggaaggacggtagcggagcccgaccaaacgccgttgatgtcgtaccactggtccggggac 114
Query: 1801 atggccagcgggaggcggcgccagcggatcaggtcgcgggacacggcgtggccc 1854
||||| | |||||| |||||||||||| ||||||||||| |||| ||||||
Sbjct: 113 atggcgacggggaggtggcgccagcggaggaggtcgcgggaggcggcatggccc 60
Score = 42.1 bits (21), Expect = 0.065
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 1227 cgcgtcgtacctccccagcgcgtagtagtcgtg 1259
|||||| |||||||||| ||| |||||||||||
Sbjct: 672 cgcgtcatacctccccaacgcatagtagtcgtg 640
>gb|AV934254.1|AV934254 AV934254 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k03 5', mRNA sequence
Length = 665
Score = 155 bits (78), Expect = 6e-036
Identities = 240/294 (81%)
Strand = Plus / Minus
Query: 1561 gtggtggggtcgcggaagtccttgggcccgatgcccgggggcgggtacagcaccgggttg 1620
||||||||||| | ||||||||| |||| ||||| |||||||||| ||||||||||
Sbjct: 346 gtggtggggtccctgaagtccttctctccgacacccggtggcgggtacatcaccgggttg 287
Query: 1621 ccctcgtacttggtccagttggtgagcagcgggtcggcgtcgtcggcgggcacggccagg 1680
||| ||||||||||||||| | |||| |||||| | | ||| | ||| | ||| |||
Sbjct: 286 ttctcatacttggtccagttgattagcaacgggtccgaggggtcagtggggaaggcgagg 227
Query: 1681 cactgcacctggacggaggcgttggtggagcccctgtagagcattgcgaggcggccgtcg 1740
|| || |||||||||||||||||||||||||| |||||||||| ||| ||||||||||
Sbjct: 226 cattggacctggacggaggcgttggtggagccggtgtagagcatgacgatgcggccgtcg 167
Query: 1741 gggagcgtggtggcggaccccgtccacacgccgttggtgtcgtaccactggtcgggcacc 1800
|| || ||| ||||| |||| ||| ||||||||| |||||||||||||||| || |
Sbjct: 166 ggaaggacggtagcggagcccgaccaaacgccgttgatgtcgtaccactggtccggggac 107
Query: 1801 atggccagcgggaggcggcgccagcggatcaggtcgcgggacacggcgtggccc 1854
||||| | |||||| |||||||||||| ||||||||||| |||| ||||||
Sbjct: 106 atggcgacggggaggtggcgccagcggaggaggtcgcgggaggcggcatggccc 53
>gb|BJ471912.1|BJ471912 BJ471912 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal28h03 5', mRNA sequence
Length = 555
Score = 155 bits (78), Expect = 6e-036
Identities = 240/294 (81%)
Strand = Plus / Minus
Query: 1561 gtggtggggtcgcggaagtccttgggcccgatgcccgggggcgggtacagcaccgggttg 1620
||||||||||| | ||||||||| |||| ||||| |||||||||| ||||||||||
Sbjct: 345 gtggtggggtccctgaagtccttctctccgacacccggtggcgggtacatcaccgggttg 286
Query: 1621 ccctcgtacttggtccagttggtgagcagcgggtcggcgtcgtcggcgggcacggccagg 1680
||| ||||||||||||||| | |||| |||||| | | ||| | ||| | ||| |||
Sbjct: 285 ttctcatacttggtccagttgattagcaacgggtccgaggggtcagtggggaaggcgagg 226
Query: 1681 cactgcacctggacggaggcgttggtggagcccctgtagagcattgcgaggcggccgtcg 1740
|| || |||||||||||||||||||||||||| |||||||||| ||| ||||||||||
Sbjct: 225 cattggacctggacggaggcgttggtggagccggtgtagagcatgacgatgcggccgtcg 166
Query: 1741 gggagcgtggtggcggaccccgtccacacgccgttggtgtcgtaccactggtcgggcacc 1800
|| || ||| ||||| |||| ||| ||||||||| |||||||||||||||| || |
Sbjct: 165 ggaaggacggtagcggagcccgaccaaacgccgttgatgtcgtaccactggtccggggac 106
Query: 1801 atggccagcgggaggcggcgccagcggatcaggtcgcgggacacggcgtggccc 1854
||||| | |||||| |||||||||||| ||||||||||| |||| ||||||
Sbjct: 105 atggcgacggggaggtggcgccagcggaggaggtcgcgggaggcggcatggccc 52
>gb|AV934255.1|AV934255 AV934255 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k04 5', mRNA sequence
Length = 530
Score = 149 bits (75), Expect = 4e-034
Identities = 239/294 (81%)
Strand = Plus / Minus
Query: 1561 gtggtggggtcgcggaagtccttgggcccgatgcccgggggcgggtacagcaccgggttg 1620
||||||||||| | ||||||||| |||| ||||| |||||||||| ||||||||||
Sbjct: 349 gtggtggggtccctgaagtccttctctccgacacccggtggcgggtacatcaccgggttg 290
Query: 1621 ccctcgtacttggtccagttggtgagcagcgggtcggcgtcgtcggcgggcacggccagg 1680
||| ||||||||||||||| | |||| |||||| | | ||| | ||| | ||| |||
Sbjct: 289 ttctcatacttggtccagttgattagcaacgggtccgaggggtcagtggggaaggcgagg 230
Query: 1681 cactgcacctggacggaggcgttggtggagcccctgtagagcattgcgaggcggccgtcg 1740
|| || ||||||||| |||||||||||||||| |||||||||| ||| ||||||||||
Sbjct: 229 cattggacctggacgnaggcgttggtggagccggtgtagagcatgacgatgcggccgtcg 170
Query: 1741 gggagcgtggtggcggaccccgtccacacgccgttggtgtcgtaccactggtcgggcacc 1800
|| || ||| ||||| |||| ||| ||||||||| |||||||||||||||| || |
Sbjct: 169 ggaaggacggtagcggagcccgaccaaacgccgttgatgtcgtaccactggtccggggac 110
Query: 1801 atggccagcgggaggcggcgccagcggatcaggtcgcgggacacggcgtggccc 1854
||||| | |||||| |||||||||||| ||||||||||| |||| ||||||
Sbjct: 109 atggcgacggggaggtggcgccagcggaggaggtcgcgggaggcggcatggccc 56
>gb|BJ463690.1|BJ463690 BJ463690 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30b12 5', mRNA sequence
Length = 593
Score = 147 bits (74), Expect = 2e-033
Identities = 177/210 (84%), Gaps = 1/210 (0%)
Strand = Plus / Minus
Query: 958 agcgtctccacctcctccacgggccactgaagcaggttgctgcccgtcttggtgtccagg 1017
||||| ||||||||| ||| |||||||| || |||||||| |||||||||||||||||
Sbjct: 593 agcgtttccacctcccgcaccggccactgtaggaggttgcttcccgtcttggtgtccagc 534
Query: 1018 agcaccgtccgggggataccctgcagcgacgcccatcccttggacacgtc-cgcgcgctc 1076
| ||||||||| ||||| ||| ||||||||||||||||||| ||||| ||||||||
Sbjct: 533 accaccgtccgagggatcgactggagcgacgcccatcccttggcgacgtcgggcgcgctc 474
Query: 1077 cgagtctgtctcgccgacccatccccacagcacgcggcggcgcttggccgggtcgtagaa 1136
||||| |||||||||||||| ||||| ||||| || || ||| || || || |||||
Sbjct: 473 agagtcggtctcgccgacccacccccatagcacccgccgcttctttgctggatcatagaa 414
Query: 1137 cgtcttggacgcgtagaacttgccccagtc 1166
|||||| |||||||||||||| ||||||||
Sbjct: 413 cgtcttagacgcgtagaactttccccagtc 384
Score = 44.1 bits (22), Expect = 0.017
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 1225 gccgcgtcgtacctccccagcgcgtagtagtcgtggcggtcgtcgtccatgctggccttc 1284
||||||||||| ||||| ||| ||||||||||| ||||| |||||| ||| |||||
Sbjct: 325 gccgcgtcgtattgccccaacgcatagtagtcgtgccggtcatcgtccgagctctccttc 266
Query: 1285 atgacgtgca 1294
|| |||||||
Sbjct: 265 atcacgtgca 256
Score = 42.1 bits (21), Expect = 0.065
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1381 gggtagaagtcgatgcactcccacatgcc 1409
||||| || ||||||||||||||||||||
Sbjct: 181 gggtataaatcgatgcactcccacatgcc 153
>gb|BJ469356.1|BJ469356 BJ469356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20h24 5', mRNA sequence
Length = 484
Score = 147 bits (74), Expect = 2e-033
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 958 agcgtctccacctcctccacgggccactgaagcaggttgctgcccgtcttggtgtccagg 1017
|||||||||||||| ||||| ||||||||||| |||||||| || ||||| ||||||||
Sbjct: 480 agcgtctccacctcgtccaccggccactgaaggaggttgcttcctgtcttagtgtccagc 421
Query: 1018 agcaccgtccgggggataccctgcagcgacgcccatcccttggacacgtccgcgcgctcc 1077
| |||||| || ||| | ||| ||||| ||||||||||||| ||||| ||||||||
Sbjct: 420 accaccgtgcgaggggtcgactgaagcgaggcccatcccttggcgacgtcggcgcgctcg 361
Query: 1078 gagtctgtctcgccgacccatccccacagcacgcggcggcgcttggccgggtcgtagaac 1137
||||| |||||||||||||| ||||| | ||| || | ||| ||||| || |||||
Sbjct: 360 gagtcagtctcgccgacccacccccataacacacgcctcttctttgccggatcatagaag 301
Query: 1138 gtcttggacgcgtagaacttgccccagtcgtagcgcaggccgatgccgacgtccctgccg 1197
|||||||| ||||||||||| ||||||||||| | ||| |||||||||| || | ||
Sbjct: 300 gtcttggatgcgtagaactttccccagtcgtacctcagcccgatgccgagatcggcgtcg 241
Query: 1198 gcgtcgatcggcgtccaggcgttggcggccgcgtcgtacctccccagcgcgtagtagtcg 1257
|||| | ||||||||| | ||| || |||||| |||||||||| ||| |||||||||
Sbjct: 240 acgtccagcggcgtccatgtgttcttggtcgcgtcatacctccccaacgcatagtagtcg 181
Query: 1258 tg 1259
||
Sbjct: 180 tg 179
>gb|BJ469224.1|BJ469224 BJ469224 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13l22 5', mRNA sequence
Length = 518
Score = 143 bits (72), Expect = 2e-032
Identities = 204/248 (82%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 256 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 197
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 196 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 137
Query: 985 tgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgcagc 1044
|| || |||||||| || |||||| | || || | ||||||||| ||| | ||| ||
Sbjct: 136 tgcaggaggttgctccctgtcttgttatctagcaccaccgtccgaggggtcgactggagg 77
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccac 1104
|| ||||||||||| | ||||| ||| |||| ||||| ||||| |||||||| ||||||
Sbjct: 76 gaggcccatcccttagcaacgtcagcgtgctcggagtcggtctcaccgacccacccccac 17
Query: 1105 agcacgcg 1112
||||||||
Sbjct: 16 agcacgcg 9
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 373 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 314
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 313 ccgacatccgc 303
>gb|BJ472162.1|BJ472162 BJ472162 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal32j05 5', mRNA sequence
Length = 623
Score = 143 bits (72), Expect = 2e-032
Identities = 204/248 (82%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 256 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 197
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 196 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 137
Query: 985 tgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgcagc 1044
|| || |||||||| || |||||| | || || | ||||||||| ||| | ||| ||
Sbjct: 136 tgcaggaggttgctccctgtcttgttatctagcaccaccgtccgaggggtcgactggagg 77
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccac 1104
|| ||||||||||| | ||||| ||| |||| ||||| ||||| |||||||| ||||||
Sbjct: 76 gaggcccatcccttagcaacgtcagcgtgctcggagtcggtctcaccgacccacccccac 17
Query: 1105 agcacgcg 1112
||||||||
Sbjct: 16 agcacgcg 9
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 373 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 314
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 313 ccgacatccgc 303
>gb|AV933884.1|AV933884 AV933884 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baalc14 5', mRNA sequence
Length = 487
Score = 137 bits (69), Expect = 1e-030
Identities = 168/200 (84%), Gaps = 1/200 (0%)
Strand = Plus / Minus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||||||||| || || ||||| ||| | ||| |||||||||| |||||||||| ||||
Sbjct: 231 gcctcgatgtcgagttgagtggcacggtgaaggctgagcgggaagacggagccgtggtcg 172
Query: 922 atggtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggc 981
||||||| | || ||||| |||||||||||| || ||||| ||||||||| ||| |||
Sbjct: 171 atggtgacccggccgaggttggtggagttggtccggagcgtttccacctcccgcaccggc 112
Query: 982 cactgaagcaggttgctgcccgtcttggtgtccaggagcaccgt-ccgggggataccctg 1040
||||| || |||||||| ||||||||||||||||| | |||||| ||| ||||| |||
Sbjct: 111 cactgtaggaggttgcttcccgtcttggtgtccagcaccaccgtnccgagggatcgactg 52
Query: 1041 cagcgacgcccatcccttgg 1060
|||||||||||| ||||||
Sbjct: 51 gagcgacgcccatnccttgg 32
Score = 50.1 bits (25), Expect = 3e-004
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 360 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 301
Query: 793 gtgctgcagttgtagcccacgtccgcctcgttg 825
||||| || ||||||| ||||| |||||||||
Sbjct: 300 gtgctacaattgtagcggacgtcggcctcgttg 268
>gb|AV934053.1|AV934053 AV934053 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baaln19 5', mRNA sequence
Length = 386
Score = 137 bits (69), Expect = 1e-030
Identities = 198/241 (82%)
Strand = Plus / Minus
Query: 947 agttggtgcgcagcgtctccacctcctccacgggccactgaagcaggttgctgcccgtct 1006
||||||| || |||||||||||||||||||| |||||||| || |||||||| || ||||
Sbjct: 386 agttggtccggagcgtctccacctcctccaccggccactgcaggaggttgctccctgtct 327
Query: 1007 tggtgtccaggagcaccgtccgggggataccctgcagcgacgcccatcccttggacacgt 1066
|| | || || | ||||||||| ||| | ||| || || ||||||||||| | ||||
Sbjct: 326 tgttatctagcaccaccgtccgaggggtcgactggagggaggcccatcccttagcaacgt 267
Query: 1067 ccgcgcgctccgagtctgtctcgccgacccatccccacagcacgcggcggcgcttggccg 1126
| ||| |||| ||||| ||||| |||||||| |||||||||||||| || ||| || |
Sbjct: 266 cagcgtgctcggagtcggtctcaccgacccacccccacagcacgcgccgcttctttgctg 207
Query: 1127 ggtcgtagaacgtcttggacgcgtagaacttgccccagtcgtagcgcaggccgatgccga 1186
| |||||||| |||||||| ||||||||||| ||||||||||| | ||| || |||||||
Sbjct: 206 gatcgtagaaagtcttggatgcgtagaactttccccagtcgtacctcagcccaatgccga 147
Query: 1187 c 1187
|
Sbjct: 146 c 146
Score = 56.0 bits (28), Expect = 4e-006
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 1227 cgcgtcgtacct-ccccagcgcgtagtagtcgtggcggtcgtcgtcc 1272
|||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 106 cgcgtcgtaccttncccagcgcgtagtagtcgtgccggtcatcgtcc 60
>gb|BI952802.1|BI952802 HVSMEm0007M07f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0007M07f, mRNA sequence
Length = 1163
Score = 131 bits (66), Expect = 9e-029
Identities = 102/114 (89%)
Strand = Plus / Minus
Query: 1046 acgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgacccatccccaca 1105
||||||||||||||| |||||| ||||||| |||| |||||||||| |||||||||||
Sbjct: 114 acgcccatcccttggccacgtcggcgcgctagaagtcggtctcgccgatccatccccaca 55
Query: 1106 gcacgcggcggcgcttggccgggtcgtagaacgtcttggacgcgtagaacttgc 1159
||||||||||| |||||| ||||||||||| |||||| |||||||||||||||
Sbjct: 54 gcacgcggcggttcttggcagggtcgtagaaggtcttgaacgcgtagaacttgc 1
>gb|BJ469491.1|BJ469491 BJ469491 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal23g06 5', mRNA sequence
Length = 585
Score = 125 bits (63), Expect = 6e-027
Identities = 186/227 (81%)
Strand = Plus / Minus
Query: 961 gtctccacctcctccacgggccactgaagcaggttgctgcccgtcttggtgtccaggagc 1020
||||||||||||||||| |||||||| || |||||||| || |||||| | || || | |
Sbjct: 585 gtctccacctcctccaccggccactgcaggaggttgctccctgtcttgttatctagcacc 526
Query: 1021 accgtccgggggataccctgcagcgacgcccatcccttggacacgtccgcgcgctccgag 1080
|||||||| ||| | ||| || || ||||||||||| | ||||| ||| |||| |||
Sbjct: 525 accgtccgaggggtcgactggagggaggcccatcccttagcaacgtcagcgtgctcggag 466
Query: 1081 tctgtctcgccgacccatccccacagcacgcggcggcgcttggccgggtcgtagaacgtc 1140
|| ||||| |||||||| |||||||||||||| || ||| || || |||||||| |||
Sbjct: 465 tcggtctcaccgacccacccccacagcacgcgccgcttctttgctggatcgtagaaagtc 406
Query: 1141 ttggacgcgtagaacttgccccagtcgtagcgcaggccgatgccgac 1187
||||| ||||||||||| ||||||||||| | ||| || ||||||||
Sbjct: 405 ttggatgcgtagaactttccccagtcgtacctcagcccaatgccgac 359
Score = 67.9 bits (34), Expect = 1e-009
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1227 cgcgtcgtacctccccagcgcgtagtagtcgtggcggtcgtcgtcc 1272
|||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 319 cgcgtcgtaccttcccagcgcgtagtagtcgtgccggtcatcgtcc 274
Score = 46.1 bits (23), Expect = 0.004
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1376 cgacggggtagaagtcgatgcactcccacat 1406
|||| ||||| ||||||||||||||||||||
Sbjct: 182 cgaccgggtacaagtcgatgcactcccacat 152
>gb|AV925741.1|AV925741 AV925741 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd25k01 5', mRNA sequence
Length = 559
Score = 121 bits (61), Expect = 9e-026
Identities = 190/233 (81%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 235 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 176
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 175 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 116
Query: 985 tgaagcaggttgctgcccgtcttggtgtccaggagcaccgtccgggggataccctgcagc 1044
|| || |||||||| || |||||| | || || | ||||||||| ||| | ||| ||
Sbjct: 115 tgcaggaggttgctccctgtcttgttatctagcaccaccgtccgaggggtcgactggagg 56
Query: 1045 gacgcccatcccttggacacgtccgcgcgctccgagtctgtctcgccgaccca 1097
|| ||||||||||| | ||||| ||| |||| ||||| ||||| ||||||||
Sbjct: 55 gaggcccatcccttagcaacgtcagcgtgctcggagtcggtctcaccgaccca 3
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 352 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 293
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 292 ccgacatccgc 282
>gb|AV923683.1|AV923683 AV923683 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd1a06 5', mRNA sequence
Length = 543
Score = 111 bits (56), Expect = 8e-023
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 236 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 177
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 176 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 117
Query: 985 tgaagcaggttgctgcccgtcttg 1008
|| || |||||||| || ||||||
Sbjct: 116 tgcaggaggttgctccctgtcttg 93
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 353 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 294
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 293 ccgacatccgc 283
>gb|AV925742.1|AV925742 AV925742 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd25k02 5', mRNA sequence
Length = 554
Score = 111 bits (56), Expect = 8e-023
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 865 tcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcgatg 924
|||||||| || || ||||||||| | ||| |||| |||| ||| |||||| |||||||
Sbjct: 239 tcgatgtcaagttgtgtggcgcggtgaaggctgagagggattacgaagccgtggtcgatg 180
Query: 925 gtgatgccgctgaggtcggtggagttggtgcgcagcgtctccacctcctccacgggccac 984
|||| | || |||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 179 gtgacccggccgaggtcggtggagttggtccggagcgtctccacctcctccaccggccac 120
Query: 985 tgaagcaggttgctgcccgtcttg 1008
|| || |||||||| || ||||||
Sbjct: 119 tgcaggaggttgctccctgtcttg 96
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 356 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 297
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 296 ccgacatccgc 286
>gb|AV927221.1|AV927221 AV927221 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1a06 3', mRNA sequence
Length = 639
Score = 109 bits (55), Expect = 3e-022
Identities = 124/147 (84%)
Strand = Plus / Plus
Query: 367 tggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcg 426
|||||||| || |||||||||||||||| |||||| | |||| |||||||| ||| ||
Sbjct: 62 tggttgtaggaggagtccatctcgtggatgacgaggcttgtggtggtgacccgggcgccg 121
Query: 427 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcggtggggtagacg 486
|||||||||||||||||| | || || |||||||||||||||||||| || ||||| ||
Sbjct: 122 gtggcgttgttgaagaggtataccccagcgttggcgtagatggcctcagtcgggtacaca 181
Query: 487 cgcgatgtggcggtggacctcccgccc 513
|| || || ||||| |||||||||||
Sbjct: 182 cgtgacgtcgcggtcaacctcccgccc 208
Score = 56.0 bits (28), Expect = 4e-006
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 748 aggccgaagggcccc-agcgcgccgcggccggcggcgcccccgctggtgctgcagttgta 806
||||||||||| ||| |||| ||| || || || ||||| ||||||||||||||||||||
Sbjct: 450 aggccgaagggacccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgta 509
Query: 807 gcccacgtccgc 818
||| || |||||
Sbjct: 510 gccgacatccgc 521
>gb|AV930881.1|AV930881 AV930881 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd25k01 3', mRNA sequence
Length = 595
Score = 109 bits (55), Expect = 3e-022
Identities = 124/147 (84%)
Strand = Plus / Plus
Query: 367 tggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcg 426
|||||||| || |||||||||||||||| |||||| | |||| |||||||| ||| ||
Sbjct: 63 tggttgtaggaggagtccatctcgtggatgacgaggcttgtggtggtgacccgggcgccg 122
Query: 427 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcggtggggtagacg 486
|||||||||||||||||| | || || |||||||||||||||||||| || ||||| ||
Sbjct: 123 gtggcgttgttgaagaggtataccccagcgttggcgtagatggcctcagtcgggtacaca 182
Query: 487 cgcgatgtggcggtggacctcccgccc 513
|| || || ||||| |||||||||||
Sbjct: 183 cgtgacgtcgcggtcaacctcccgccc 209
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 450 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 509
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 510 ccgacatccgc 520
>gb|AV932206.1|AV932206 AV932206 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2l03 5', mRNA sequence
Length = 627
Score = 109 bits (55), Expect = 3e-022
Identities = 145/175 (82%)
Strand = Plus / Minus
Query: 379 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 438
||||||||||||||| ||||||| | || | |||||||| ||| ||||||||||||||
Sbjct: 529 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 470
Query: 439 aagaggaagacgccggcgttggcgtagatggcctcggtggggtagacgcgcgatgtggcg 498
|||||| | || || |||||||| |||||||||||||| || || || || || || |
Sbjct: 469 aagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgtgacgtcacc 410
Query: 499 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 553
||||||||||||||| || |||||||| |||||||||||||| || |||||||
Sbjct: 409 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 355
Score = 50.1 bits (25), Expect = 3e-004
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 169 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 110
Query: 793 gtgctgcagttgtagcccacgtccgcctcgttg 825
||||| || ||||||| ||||| |||||||||
Sbjct: 109 gtgctacaattgtagcggacgtcggcctcgttg 77
>gb|AV934754.1|AV934754 AV934754 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal1i04 3', mRNA sequence
Length = 518
Score = 109 bits (55), Expect = 3e-022
Identities = 124/147 (84%)
Strand = Plus / Plus
Query: 367 tggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcg 426
|||||||| || |||||||||||||||| |||||| | |||| |||||||| ||| ||
Sbjct: 91 tggttgtaggaggagtccatctcgtggatgacgaggcttgtggtggtgacccgggcgccg 150
Query: 427 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcggtggggtagacg 486
|||||||||||||||||| | || || |||||||||||||||||||| || ||||| ||
Sbjct: 151 gtggcgttgttgaagaggtataccccagcgttggcgtagatggcctcagtcgggtacaca 210
Query: 487 cgcgatgtggcggtggacctcccgccc 513
|| || || ||||| |||||||||||
Sbjct: 211 cgtgacgtcgcggtcaacctcccgccc 237
>gb|AV935049.1|AV935049 AV935049 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2l03 3', mRNA sequence
Length = 627
Score = 109 bits (55), Expect = 3e-022
Identities = 145/175 (82%)
Strand = Plus / Plus
Query: 379 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 438
||||||||||||||| ||||||| | || | |||||||| ||| ||||||||||||||
Sbjct: 243 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 302
Query: 439 aagaggaagacgccggcgttggcgtagatggcctcggtggggtagacgcgcgatgtggcg 498
|||||| | || || |||||||| |||||||||||||| || || || || || || |
Sbjct: 303 aagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgtgacgtcacc 362
Query: 499 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 553
||||||||||||||| || |||||||| |||||||||||||| || |||||||
Sbjct: 363 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 417
>gb|AV935084.1|AV935084 AV935084 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2n09 3', mRNA sequence
Length = 646
Score = 109 bits (55), Expect = 3e-022
Identities = 145/175 (82%)
Strand = Plus / Plus
Query: 379 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 438
||||||||||||||| ||||||| | || | |||||||| ||| ||||||||||||||
Sbjct: 246 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 305
Query: 439 aagaggaagacgccggcgttggcgtagatggcctcggtggggtagacgcgcgatgtggcg 498
|||||| | || || |||||||| |||||||||||||| || || || || || || |
Sbjct: 306 aagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgtgacgtcacc 365
Query: 499 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 553
||||||||||||||| || |||||||| |||||||||||||| || |||||||
Sbjct: 366 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 420
>gb|AV935252.1|AV935252 AV935252 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3h03 3', mRNA sequence
Length = 616
Score = 109 bits (55), Expect = 3e-022
Identities = 124/147 (84%)
Strand = Plus / Plus
Query: 367 tggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcg 426
|||||||| || |||||||||||||||| |||||| | |||| |||||||| ||| ||
Sbjct: 91 tggttgtaggaggagtccatctcgtggatgacgaggcttgtggtggtgacccgggcgccg 150
Query: 427 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcggtggggtagacg 486
|||||||||||||||||| | || || |||||||||||||||||||| || ||||| ||
Sbjct: 151 gtggcgttgttgaagaggtataccccagcgttggcgtagatggcctcagtcgggtacaca 210
Query: 487 cgcgatgtggcggtggacctcccgccc 513
|| || || ||||| |||||||||||
Sbjct: 211 cgtgacgtcgcggtcaacctcccgccc 237
Score = 56.0 bits (28), Expect = 4e-006
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 748 aggccgaagggcccc-agcgcgccgcggccggcggcgcccccgctggtgctgcagttgta 806
||||||||||| ||| |||| ||| || || || ||||| ||||||||||||||||||||
Sbjct: 479 aggccgaagggacccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgta 538
Query: 807 gcccacgtccgc 818
||| || |||||
Sbjct: 539 gccgacatccgc 550
>gb|AV935698.1|AV935698 AV935698 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6a11 3', mRNA sequence
Length = 684
Score = 109 bits (55), Expect = 3e-022
Identities = 145/175 (82%)
Strand = Plus / Plus
Query: 379 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 438
||||||||||||||| ||||||| | || | |||||||| ||| ||||||||||||||
Sbjct: 248 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 307
Query: 439 aagaggaagacgccggcgttggcgtagatggcctcggtggggtagacgcgcgatgtggcg 498
|||||| | || || |||||||| |||||||||||||| || || || || || || |
Sbjct: 308 aagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgtgacgtcacc 367
Query: 499 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 553
||||||||||||||| || |||||||| |||||||||||||| || |||||||
Sbjct: 368 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 422
Score = 40.1 bits (20), Expect = 0.26
Identities = 62/76 (81%)
Strand = Plus / Plus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 609 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 668
Query: 793 gtgctgcagttgtagc 808
||||| || |||||||
Sbjct: 669 gtgctacaattgtagc 684
>gb|AV935854.1|AV935854 AV935854 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6l17 3', mRNA sequence
Length = 653
Score = 109 bits (55), Expect = 3e-022
Identities = 145/175 (82%)
Strand = Plus / Plus
Query: 379 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 438
||||||||||||||| ||||||| | || | |||||||| ||| ||||||||||||||
Sbjct: 69 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 128
Query: 439 aagaggaagacgccggcgttggcgtagatggcctcggtggggtagacgcgcgatgtggcg 498
|||||| | || || |||||||| |||||||||||||| || || || || || || |
Sbjct: 129 aagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgtgacgtcacc 188
Query: 499 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 553
||||||||||||||| || |||||||| |||||||||||||| || |||||||
Sbjct: 189 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 243
Score = 71.9 bits (36), Expect = 7e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||||||||| || || ||||| ||| | ||| |||||||||| |||||||||| ||||
Sbjct: 558 gcctcgatgtcgagttgagtggcacggtgaaggctgagcgggaagacggagccgtggtcg 617
Query: 922 atggtgatgccgctgaggtcggtggagttggt 953
||||||| | || ||||| ||||||||||||
Sbjct: 618 atggtgacccggccgaggttggtggagttggt 649
Score = 50.1 bits (25), Expect = 3e-004
Identities = 76/93 (81%)
Strand = Plus / Plus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 429 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 488
Query: 793 gtgctgcagttgtagcccacgtccgcctcgttg 825
||||| || ||||||| ||||| |||||||||
Sbjct: 489 gtgctacaattgtagcggacgtcggcctcgttg 521
>gb|AV936007.1|AV936007 AV936007 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7i06 3', mRNA sequence
Length = 589
Score = 109 bits (55), Expect = 3e-022
Identities = 145/175 (82%)
Strand = Plus / Plus
Query: 379 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 438
||||||||||||||| ||||||| | || | |||||||| ||| ||||||||||||||
Sbjct: 264 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 323
Query: 439 aagaggaagacgccggcgttggcgtagatggcctcggtggggtagacgcgcgatgtggcg 498
|||||| | || || |||||||| |||||||||||||| || || || || || || |
Sbjct: 324 aagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgtgacgtcacc 383
Query: 499 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 553
||||||||||||||| || |||||||| |||||||||||||| || |||||||
Sbjct: 384 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 438
>gb|AV936119.1|AV936119 AV936119 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10c14 3', mRNA sequence
Length = 609
Score = 109 bits (55), Expect = 3e-022
Identities = 145/175 (82%)
Strand = Plus / Plus
Query: 379 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 438
||||||||||||||| ||||||| | || | |||||||| ||| ||||||||||||||
Sbjct: 236 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 295
Query: 439 aagaggaagacgccggcgttggcgtagatggcctcggtggggtagacgcgcgatgtggcg 498
|||||| | || || |||||||| |||||||||||||| || || || || || || |
Sbjct: 296 aagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgtgacgtcacc 355
Query: 499 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 553
||||||||||||||| || |||||||| |||||||||||||| || |||||||
Sbjct: 356 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 410
>gb|AV936325.1|AV936325 AV936325 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10o20 3', mRNA sequence
Length = 604
Score = 109 bits (55), Expect = 3e-022
Identities = 124/147 (84%)
Strand = Plus / Plus
Query: 367 tggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcg 426
|||||||| || |||||||||||||||| |||||| | |||| |||||||| ||| ||
Sbjct: 72 tggttgtaggaggagtccatctcgtggatgacgaggcttgtggtggtgacccgggcgccg 131
Query: 427 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcggtggggtagacg 486
|||||||||||||||||| | || || |||||||||||||||||||| || ||||| ||
Sbjct: 132 gtggcgttgttgaagaggtataccccagcgttggcgtagatggcctcagtcgggtacaca 191
Query: 487 cgcgatgtggcggtggacctcccgccc 513
|| || || ||||| |||||||||||
Sbjct: 192 cgtgacgtcgcggtcaacctcccgccc 218
Score = 61.9 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 748 aggccgaagggccccagcgcgccgcggccggcggcgcccccgctggtgctgcagttgtag 807
||||||||||| || |||| ||| || || || ||||| |||||||||||||||||||||
Sbjct: 459 aggccgaagggaccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgtag 518
Query: 808 cccacgtccgc 818
|| || |||||
Sbjct: 519 ccgacatccgc 529
>gb|AV936971.1|AV936971 AV936971 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal8j03 3', mRNA sequence
Length = 622
Score = 109 bits (55), Expect = 3e-022
Identities = 124/147 (84%)
Strand = Plus / Plus
Query: 367 tggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcg 426
|||||||| || |||||||||||||||| |||||| | |||| |||||||| ||| ||
Sbjct: 114 tggttgtaggaggagtccatctcgtggatgacgaggcttgtggtggtgacccgggcgccg 173
Query: 427 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcggtggggtagacg 486
|||||||||||||||||| | || || |||||||||||||||||||| || ||||| ||
Sbjct: 174 gtggcgttgttgaagaggtataccccagcgttggcgtagatggcctcagtcgggtacaca 233
Query: 487 cgcgatgtggcggtggacctcccgccc 513
|| || || ||||| |||||||||||
Sbjct: 234 cgtgacgtcgcggtcaacctcccgccc 260
Score = 42.1 bits (21), Expect = 0.065
Identities = 62/73 (84%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 748 aggccgaagggcccc-agcgcgccgcggccggcggcgcccccgctggtgct-gcagttgt 805
||||||||||| ||| |||| ||| || || || ||||| ||||||||||| ||||||||
Sbjct: 502 aggccgaagggacccgagcgtgccccgtccagccgcgccgccgctggtgcttgcagttgt 561
Query: 806 agcccacgtccgc 818
|||| || |||||
Sbjct: 562 agccgacatccgc 574
>gb|AV936995.1|AV936995 AV936995 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal8l14 3', mRNA sequence
Length = 584
Score = 109 bits (55), Expect = 3e-022
Identities = 124/147 (84%)
Strand = Plus / Plus
Query: 367 tggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcg 426
|||||||| || |||||||||||||||| |||||| | |||| |||||||| ||| ||
Sbjct: 91 tggttgtaggaggagtccatctcgtggatgacgaggcttgtggtggtgacccgggcgccg 150
Query: 427 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcggtggggtagacg 486
|||||||||||||||||| | || || |||||||||||||||||||| || ||||| ||
Sbjct: 151 gtggcgttgttgaagaggtataccccagcgttggcgtagatggcctcagtcgggtacaca 210
Query: 487 cgcgatgtggcggtggacctcccgccc 513
|| || || ||||| |||||||||||
Sbjct: 211 cgtgacgtcgcggtcaacctcccgccc 237
>gb|AV937220.1|AV937220 AV937220 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal9n05 3', mRNA sequence
Length = 633
Score = 109 bits (55), Expect = 3e-022
Identities = 124/147 (84%)
Strand = Plus / Plus
Query: 367 tggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcg 426
|||||||| || |||||||||||||||| |||||| | |||| |||||||| ||| ||
Sbjct: 93 tggttgtaggaggagtccatctcgtggatgacgaggcttgtggtggtgacccgggcgccg 152
Query: 427 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcggtggggtagacg 486
|||||||||||||||||| | || || |||||||||||||||||||| || ||||| ||
Sbjct: 153 gtggcgttgttgaagaggtataccccagcgttggcgtagatggcctcagtcgggtacaca 212
Query: 487 cgcgatgtggcggtggacctcccgccc 513
|| || || ||||| |||||||||||
Sbjct: 213 cgtgacgtcgcggtcaacctcccgccc 239
Score = 56.0 bits (28), Expect = 4e-006
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 748 aggccgaagggcccc-agcgcgccgcggccggcggcgcccccgctggtgctgcagttgta 806
||||||||||| ||| |||| ||| || || || ||||| ||||||||||||||||||||
Sbjct: 481 aggccgaagggacccgagcgtgccccgtccagccgcgccgccgctggtgctgcagttgta 540
Query: 807 gcccacgtccgc 818
||| || |||||
Sbjct: 541 gccgacatccgc 552
>gb|BJ467860.1|BJ467860 BJ467860 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30b12 3', mRNA sequence
Length = 669
Score = 109 bits (55), Expect = 3e-022
Identities = 145/175 (82%)
Strand = Plus / Plus
Query: 379 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 438
||||||||||||||| ||||||| | || | |||||||| ||| ||||||||||||||
Sbjct: 81 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 140
Query: 439 aagaggaagacgccggcgttggcgtagatggcctcggtggggtagacgcgcgatgtggcg 498
|||||| | || || |||||||| |||||||||||||| || || || || || || |
Sbjct: 141 aagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgtgacgtcacc 200
Query: 499 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 553
||||||||||||||| || |||||||| |||||||||||||| || |||||||
Sbjct: 201 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 255
Score = 71.9 bits (36), Expect = 7e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 862 gcctcgatgtccagctgggtggcgcggcggaggttgagcgggaacacggagccgtagtcg 921
||||||||||| || || ||||| ||| | ||| |||||||||| |||||||||| ||||
Sbjct: 570 gcctcgatgtcgagttgagtggcacggtgaaggctgagcgggaagacggagccgtggtcg 629
Query: 922 atggtgatgccgctgaggtcggtggagttggt 953
||||||| | || ||||| ||||||||||||
Sbjct: 630 atggtgacccggccgaggttggtggagttggt 661
Score = 50.1 bits (25), Expect = 3e-004
Identities = 76/93 (81%)
Strand = Plus / Plus
Query: 733 tcggcgaggacgaacaggccgaagggccccagcgcgccgcggccggcggcgcccccgctg 792
|||||||| |||| |||||||||||| || || ||||| || || || || || || |||
Sbjct: 441 tcggcgagcacgagcaggccgaagggtccgagggcgcctcgtcccgccgccccgccactg 500
Query: 793 gtgctgcagttgtagcccacgtccgcctcgttg 825
||||| || ||||||| ||||| |||||||||
Sbjct: 501 gtgctacaattgtagcggacgtcggcctcgttg 533
>gb|BJ469495.1|BJ469495 BJ469495 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal23g14 5', mRNA sequence
Length = 530
Score = 109 bits (55), Expect = 3e-022
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 367 tggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcg 426
|||||||| || |||||||||||||||| |||||| | |||| |||||||| ||| ||
Sbjct: 432 tggttgtaggaggagtccatctcgtggatgacgaggcttgtggtggtgacccgggcgccg 373
Query: 427 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcggtggggtagacg 486
|||||||||||||||||| | || || |||||||||||||||||||| || ||||| ||
Sbjct: 372 gtggcgttgttgaagaggtataccccagcgttggcgtagatggcctcagtcgggtacaca 313
Query: 487 cgcgatgtggcggtggacctcccgccc 513
|| || || ||||| |||||||||||
Sbjct: 312 cgtgacgtcgcggtcaacctcccgccc 286
>gb|BJ470411.1|BJ470411 BJ470411 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal22b19 5', mRNA sequence
Length = 330
Score = 109 bits (55), Expect = 3e-022
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 367 tggttgtatgacgagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcg 426
|||||||| || |||||||||||||||| |||||| | |||| |||||||| ||| ||
Sbjct: 255 tggttgtaggaggagtccatctcgtggatgacgaggcttgtggtggtgacccgggcgccg 196
Query: 427 gtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctcggtggggtagacg 486
|||||||||||||||||| | || || |||||||||||||||||||| || ||||| ||
Sbjct: 195 gtggcgttgttgaagaggtataccccagcgttggcgtagatggcctcagtcgggtacaca 136
Query: 487 cgcgatgtggcggtggacctcccgccc 513
|| || || ||||| |||||||||||
Sbjct: 135 cgtgacgtcgcggtcaacctcccgccc 109
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 333,008
Number of Sequences: 312970
Number of extensions: 333008
Number of successful extensions: 106659
Number of sequences better than 0.5: 239
Number of HSP's better than 0.5 without gapping: 238
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 105595
Number of HSP's gapped (non-prelim): 950
length of query: 1865
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1846
effective length of database: 169,188,109
effective search space: 312321249214
effective search space used: 312321249214
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)