BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829501.2.1
(1141 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG367460.1|BG367460 HVSMEi0012F13f Hordeum vulgare 20 DA... 216 1e-054
gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike... 216 1e-054
gb|BI949350.1|BI949350 HVSMEl0013H11f Hordeum vulgare spike... 208 3e-052
gb|BG367616.2|BG367616 HVSMEi0012P08f Hordeum vulgare 20 DA... 186 1e-045
gb|BM371934.2|BM371934 EBma08_SQ004_H03_R maternal, 28 DPA,... 172 2e-041
gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DA... 168 3e-040
gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike... 168 3e-040
gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa... 168 3e-040
gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa... 168 3e-040
gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa... 168 3e-040
gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 ... 168 3e-040
gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DA... 168 3e-040
gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DA... 168 3e-040
gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa... 161 6e-038
gb|BI954237.1|BI954237 HVSMEm0016M07f Hordeum vulgare green... 157 1e-036
gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 ... 155 4e-036
gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 ... 155 4e-036
gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DA... 155 4e-036
gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DA... 153 2e-035
gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa... 149 2e-034
gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike... 145 4e-033
gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 ... 145 4e-033
gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA li... 145 4e-033
gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA li... 145 4e-033
gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. v... 145 4e-033
gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. v... 145 4e-033
gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA... 145 4e-033
gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA,... 145 4e-033
gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA,... 145 4e-033
gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA,... 145 4e-033
gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA... 145 4e-033
gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. v... 145 4e-033
gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. v... 145 4e-033
gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 ... 141 6e-032
gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DA... 141 6e-032
gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 ... 139 2e-031
gb|BG368854.1|BG368854 HVSMEi0020P07f Hordeum vulgare 20 DA... 139 2e-031
gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DA... 137 9e-031
gb|BG365157.2|BG365157 HVSMEi0001I15f Hordeum vulgare 20 DA... 137 9e-031
gb|BQ465191.1|BQ465191 HU02O12r HU Hordeum vulgare subsp. v... 137 9e-031
gb|BQ466147.1|BQ466147 HT01L11T HT Hordeum vulgare subsp. v... 137 9e-031
gb|CA012210.1|CA012210 HT04M11r HT Hordeum vulgare subsp. v... 137 9e-031
gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. v... 137 9e-031
gb|CA013604.1|CA013604 HT08P16r HT Hordeum vulgare subsp. v... 137 9e-031
gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitin... 137 9e-031
gb|BE195290.2|BE195290 HVSMEh0088N04f Hordeum vulgare 5-45 ... 135 4e-030
gb|BG366443.1|BG366443 HVSMEi0007B04f Hordeum vulgare 20 DA... 135 4e-030
gb|BG366444.1|BG366444 HVSMEi0007B06f Hordeum vulgare 20 DA... 135 4e-030
gb|BG366514.1|BG366514 HVSMEi0007F02f Hordeum vulgare 20 DA... 135 4e-030
gb|BG368439.1|BG368439 HVSMEi0018M10f Hordeum vulgare 20 DA... 135 4e-030
gb|BE196066.3|BE196066 HVSMEh0091E09f Hordeum vulgare 5-45 ... 135 4e-030
gb|BG365564.2|BG365564 HVSMEi0003D14f Hordeum vulgare 20 DA... 135 4e-030
gb|BG365745.2|BG365745 HVSMEi0004A12f Hordeum vulgare 20 DA... 135 4e-030
gb|BG366294.2|BG366294 HVSMEi0006J18f Hordeum vulgare 20 DA... 135 4e-030
gb|BG366607.2|BG366607 HVSMEi0007J19f Hordeum vulgare 20 DA... 135 4e-030
gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA,... 135 4e-030
gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA,... 135 4e-030
gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA,... 135 4e-030
gb|BQ758640.1|BQ758640 EBma07_SQ002_J07_R maternal, 21 DPA,... 135 4e-030
gb|CA012410.1|CA012410 HT05F17r HT Hordeum vulgare subsp. v... 135 4e-030
gb|CA014966.1|CA014966 HT12N24r HT Hordeum vulgare subsp. v... 135 4e-030
gb|CA015187.1|CA015187 HT13I21r HT Hordeum vulgare subsp. v... 135 4e-030
gb|BG369819.1|BG369819 HVSMEi0026C13f Hordeum vulgare 20 DA... 133 1e-029
gb|BM371530.2|BM371530 EBma08_SQ003_B11_R maternal, 28 DPA,... 133 1e-029
gb|BM371568.2|BM371568 EBma08_SQ003_D15_R maternal, 28 DPA,... 133 1e-029
gb|AL499683.1|AL499683 AL499683 Hordeum vulgare Barke etiol... 131 6e-029
gb|AL500402.1|AL500402 AL500402 Hordeum vulgare Barke etiol... 131 6e-029
gb|BF624146.2|BF624146 HVSMEa0012B06f Hordeum vulgare seedl... 131 6e-029
gb|BF618044.2|BF618044 HVSMEc0003G16f Hordeum vulgare seedl... 131 6e-029
gb|BF618924.2|BF618924 HVSMEc0008L15f Hordeum vulgare seedl... 131 6e-029
gb|BF619746.2|BF619746 HVSMEc0009B09f Hordeum vulgare seedl... 131 6e-029
gb|BF618914.3|BF618914 HVSMEc0008L05f Hordeum vulgare seedl... 131 6e-029
gb|BE455567.3|BE455567 HVSMEg0017N15f Hordeum vulgare pre-a... 131 6e-029
gb|BQ460973.1|BQ460973 HE01J14r HE Hordeum vulgare subsp. v... 131 6e-029
gb|BQ462856.1|BQ462856 HI02D16r HI Hordeum vulgare subsp. v... 131 6e-029
gb|BQ467924.1|BQ467924 HR01F22r HR Hordeum vulgare subsp. v... 131 6e-029
gb|BU997123.1|BU997123 HI06P17r HI Hordeum vulgare subsp. v... 131 6e-029
gb|BG365326.1|BG365326 HVSMEi0002E22f Hordeum vulgare 20 DA... 129 2e-028
gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike... 129 2e-028
gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa... 129 2e-028
gb|CA017694.1|CA017694 HV05P04r HV Hordeum vulgare subsp. v... 129 2e-028
gb|BF620099.2|BF620099 HVSMEc0011P11f Hordeum vulgare seedl... 127 9e-028
gb|BE602375.2|BE602375 HVSMEh0098L01f Hordeum vulgare 5-45 ... 127 9e-028
gb|BE602137.3|BE602137 HVSMEh0102K15f Hordeum vulgare 5-45 ... 127 9e-028
gb|BG368640.2|BG368640 HVSMEi0020A24f Hordeum vulgare 20 DA... 127 9e-028
gb|CA018162.1|CA018162 HV07L16r HV Hordeum vulgare subsp. v... 127 9e-028
emb|AJ400137.1|HVU400137 Hordeum vulgare subsp. vulgare par... 127 9e-028
gb|BQ758652.1|BQ758652 EBma07_SQ002_L09_R maternal, 21 DPA,... 125 3e-027
gb|BI946596.1|BI946596 HVSMEl0001A13f Hordeum vulgare spike... 123 1e-026
gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedl... 123 1e-026
gb|BG369545.2|BG369545 HVSMEi0024N21f Hordeum vulgare 20 DA... 121 5e-026
gb|CA018351.1|CA018351 HV08G01r HV Hordeum vulgare subsp. v... 121 5e-026
gb|BE454981.1|BE454981 HVSMEh0095L21f Hordeum vulgare 5-45 ... 119 2e-025
gb|BG415850.1|BG415850 HVSMEk0008C15f Hordeum vulgare testa... 119 2e-025
gb|BG368219.2|BG368219 HVSMEi0016L15f Hordeum vulgare 20 DA... 119 2e-025
gb|CA028432.1|CA028432 HZ61P07r HZ Hordeum vulgare subsp. v... 119 2e-025
gb|BQ663496.1|BQ663496 HU02O12u HU Hordeum vulgare subsp. v... 117 8e-025
gb|CA016825.1|CA016825 HV05P04u HV Hordeum vulgare subsp. v... 117 8e-025
gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. v... 117 8e-025
gb|CA022259.1|CA022259 HZ42J20r HZ Hordeum vulgare subsp. v... 117 8e-025
gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Le... 115 3e-024
gb|BG365887.1|BG365887 HVSMEi0004K07f Hordeum vulgare 20 DA... 115 3e-024
gb|BG365415.2|BG365415 HVSMEi0002J15f Hordeum vulgare 20 DA... 115 3e-024
gb|BI947731.1|BI947731 HVSMEl0006K11f Hordeum vulgare spike... 111 5e-023
gb|BE193259.3|BE193259 HVSMEh0080F13f Hordeum vulgare 5-45 ... 111 5e-023
gb|BQ755873.1|BQ755873 EBed07_SQ003_G24_R endosperm, 28 DPA... 111 5e-023
gb|BG365987.1|BG365987 HVSMEi0005K09f Hordeum vulgare 20 DA... 109 2e-022
gb|BG369571.2|BG369571 HVSMEi0024P21f Hordeum vulgare 20 DA... 109 2e-022
gb|BM371738.2|BM371738 EBma08_SQ003_M12_R maternal, 28 DPA,... 109 2e-022
gb|BF628273.2|BF628273 HVSMEb0003J13f Hordeum vulgare seedl... 107 8e-022
gb|BF257499.2|BF257499 HVSMEf0013B07f Hordeum vulgare seedl... 107 8e-022
gb|BM097181.2|BM097181 EBpi07_SQ002_K16_R pistil, 12 DPA, n... 107 8e-022
gb|CA018205.1|CA018205 HV07O23r HV Hordeum vulgare subsp. v... 107 8e-022
gb|CA019539.1|CA019539 HV12E21r HV Hordeum vulgare subsp. v... 107 8e-022
gb|BG366793.2|BG366793 HVSMEi0008F20f Hordeum vulgare 20 DA... 105 3e-021
emb|X15349.1|HVENDCHT Barley (H.vulgare) mRNA for endochiti... 105 3e-021
gb|BF259800.2|BF259800 HVSMEf0020E19f Hordeum vulgare seedl... 103 1e-020
gb|BI948276.1|BI948276 HVSMEl0008N14f Hordeum vulgare spike... 101 5e-020
gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA li... 101 5e-020
gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA li... 101 5e-020
gb|AV926194.1|AV926194 AV926194 K. Sato unpublished cDNA li... 101 5e-020
gb|BE601801.2|BE601801 HVSMEh0099J11f Hordeum vulgare 5-45 ... 100 2e-019
gb|BI949605.1|BI949605 HVSMEl0014O01f Hordeum vulgare spike... 100 2e-019
gb|BG368322.1|BG368322 HVSMEi0017L06f Hordeum vulgare 20 DA... 98 8e-019
gb|BG367660.2|BG367660 HVSMEi0013B21f Hordeum vulgare 20 DA... 98 8e-019
gb|BG369058.2|BG369058 HVSMEi0021J04f Hordeum vulgare 20 DA... 98 8e-019
gb|BF257249.2|BF257249 HVSMEf0012F06f Hordeum vulgare seedl... 94 1e-017
gb|BU984341.1|BU984341 HF03K16r HF Hordeum vulgare subsp. v... 94 1e-017
gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. v... 94 1e-017
gb|BG301220.2|BG301220 HVSMEb0019P18f Hordeum vulgare seedl... 92 5e-017
gb|BM372933.2|BM372933 EBma04_SQ002_H02_R maternal, 10 DPA,... 92 5e-017
gb|CA019044.1|CA019044 HV10J02r HV Hordeum vulgare subsp. v... 92 5e-017
gb|BG418257.2|BG418257 HVSMEk0022B19f Hordeum vulgare testa... 88 7e-016
gb|CB879149.1|CB879149 HP11B19T HP Hordeum vulgare subsp. v... 88 7e-016
gb|BF255193.2|BF255193 HVSMEf0006D08f Hordeum vulgare seedl... 86 3e-015
gb|CA013184.1|CA013184 HT07K10r HT Hordeum vulgare subsp. v... 86 3e-015
gb|CA013444.1|CA013444 HT08H14r HT Hordeum vulgare subsp. v... 86 3e-015
gb|BG365956.1|BG365956 HVSMEi0005I01f Hordeum vulgare 20 DA... 84 1e-014
gb|BG415997.2|BG415997 HVSMEk0009F15f Hordeum vulgare testa... 84 1e-014
gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA li... 84 1e-014
gb|BU988906.1|BU988906 HF19B23r HF Hordeum vulgare subsp. v... 84 1e-014
gb|BE411672.1|BE411672 ISC008.A09F990802 ITEC ISC Barley Le... 82 5e-014
gb|AV933330.1|AV933330 AV933330 K. Sato unpublished cDNA li... 82 5e-014
gb|AV933371.1|AV933371 AV933371 K. Sato unpublished cDNA li... 82 5e-014
gb|AV935770.1|AV935770 AV935770 K. Sato unpublished cDNA li... 82 5e-014
gb|AV935813.1|AV935813 AV935813 K. Sato unpublished cDNA li... 82 5e-014
gb|BJ469713.1|BJ469713 BJ469713 K. Sato unpublished cDNA li... 82 5e-014
gb|BJ476805.1|BJ476805 BJ476805 K. Sato unpublished cDNA li... 82 5e-014
gb|CA026694.1|CA026694 HZ56K16r HZ Hordeum vulgare subsp. v... 82 5e-014
gb|CB858429.1|CB858429 HI06P17w HI Hordeum vulgare subsp. v... 82 5e-014
gb|CB877034.1|CB877034 HP03F07T HP Hordeum vulgare subsp. v... 82 5e-014
gb|CB879697.1|CB879697 HP03F07w HP Hordeum vulgare subsp. v... 82 5e-014
gb|CD663592.1|CD663592 UCRHV18_06aa04_b1 Drought-stressed D... 82 5e-014
gb|BI947511.1|BI947511 HVSMEl0005L16f Hordeum vulgare spike... 80 2e-013
gb|BG300290.1|BG300290 HVSMEb0011P12f Hordeum vulgare seedl... 78 7e-013
gb|AV933383.1|AV933383 AV933383 K. Sato unpublished cDNA li... 78 7e-013
gb|CA010697.1|CA010697 HT08P16u HT Hordeum vulgare subsp. v... 78 7e-013
gb|BF625707.2|BF625707 HVSMEa0013F08f Hordeum vulgare seedl... 76 3e-012
gb|BF254969.2|BF254969 HVSMEf0005J03f Hordeum vulgare seedl... 76 3e-012
gb|BE195244.3|BE195244 HVSMEh0088K24f Hordeum vulgare 5-45 ... 76 3e-012
gb|BG369253.2|BG369253 HVSMEi0023G17f Hordeum vulgare 20 DA... 76 3e-012
gb|BM368822.1|BM368822 EBem08_SQ004_L06_R embryo, 40 DPA, n... 76 3e-012
gb|BQ467964.1|BQ467964 HR01H21r HR Hordeum vulgare subsp. v... 76 3e-012
gb|BQ765668.1|BQ765668 EBro03_SQ007_G22_R root, 3 week, wat... 76 3e-012
gb|CA011984.1|CA011984 HT04B14r HT Hordeum vulgare subsp. v... 76 3e-012
gb|CA013940.1|CA013940 HT09O20r HT Hordeum vulgare subsp. v... 74 1e-011
gb|CA014232.1|CA014232 HT10M05r HT Hordeum vulgare subsp. v... 74 1e-011
gb|BF622482.2|BF622482 HVSMEa0004I11f Hordeum vulgare seedl... 70 2e-010
gb|BJ451756.1|BJ451756 BJ451756 K. Sato unpublished cDNA li... 70 2e-010
gb|BJ459252.1|BJ459252 BJ459252 K. Sato unpublished cDNA li... 70 2e-010
gb|BE422349.1|BE422349 HWM023cB.11r ITEC HWM Barley Leaf Li... 68 7e-010
gb|BF260167.2|BF260167 HVSMEf0021E14f Hordeum vulgare seedl... 68 7e-010
gb|BG367092.2|BG367092 HVSMEi0010E09f Hordeum vulgare 20 DA... 68 7e-010
gb|BG368641.2|BG368641 HVSMEi0020B02f Hordeum vulgare 20 DA... 68 7e-010
emb|AJ400138.1|HVU400138 Hordeum vulgare subsp. vulgare par... 68 7e-010
gb|BF260667.1|BF260667 HVSMEf0022J23f Hordeum vulgare seedl... 66 3e-009
gb|AV931076.1|AV931076 AV931076 K. Sato unpublished cDNA li... 66 3e-009
gb|AV935825.1|AV935825 AV935825 K. Sato unpublished cDNA li... 66 3e-009
gb|BQ659497.1|BQ659497 HE01J14u HE Hordeum vulgare subsp. v... 66 3e-009
gb|BQ755243.1|BQ755243 EBed07_SQ002_G06_R endosperm, 28 DPA... 66 3e-009
gb|CA016532.1|CA016532 HV08G01u HV Hordeum vulgare subsp. v... 66 3e-009
gb|BM441893.2|BM441893 EBed07_SQ001_N14_R endosperm, 28 DPA... 64 1e-008
gb|CA015968.1|CA015968 HV10J02u HV Hordeum vulgare subsp. v... 64 1e-008
gb|BG366254.1|BG366254 HVSMEi0006G16f Hordeum vulgare 20 DA... 62 4e-008
gb|BI947847.1|BI947847 HVSMEl0007C24f Hordeum vulgare spike... 62 4e-008
gb|BE195767.3|BE195767 HVSMEh0090G11f Hordeum vulgare 5-45 ... 62 4e-008
gb|AL450510.1|AL450510 AL450510 Hordeum vulgare Barke etiol... 60 2e-007
gb|BI951167.1|BI951167 HVSMEl0024N04f Hordeum vulgare spike... 58 7e-007
gb|BI952125.1|BI952125 HVSMEm0004L07f Hordeum vulgare green... 58 7e-007
gb|BE214483.2|BE214483 HV_CEb0003J11f Hordeum vulgare seedl... 58 7e-007
gb|BF255525.2|BF255525 HVSMEf0007B13f Hordeum vulgare seedl... 58 7e-007
gb|AV908859.1|AV908859 AV908859 K. Sato unpublished cDNA li... 58 7e-007
gb|AV909683.1|AV909683 AV909683 K. Sato unpublished cDNA li... 58 7e-007
gb|AV911582.1|AV911582 AV911582 K. Sato unpublished cDNA li... 58 7e-007
gb|AV928645.1|AV928645 AV928645 K. Sato unpublished cDNA li... 58 7e-007
gb|BQ757012.1|BQ757012 EBem10_SQ002_I05_R embryo, 2 Day ger... 58 7e-007
gb|CA009849.1|CA009849 HT12N24u HT Hordeum vulgare subsp. v... 58 7e-007
gb|BJ544300.1|BJ544300 BJ544300 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ544721.1|BJ544721 BJ544721 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ544774.1|BJ544774 BJ544774 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ544954.1|BJ544954 BJ544954 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ545740.1|BJ545740 BJ545740 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ546018.1|BJ546018 BJ546018 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ546165.1|BJ546165 BJ546165 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ546197.1|BJ546197 BJ546197 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ546246.1|BJ546246 BJ546246 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ546257.1|BJ546257 BJ546257 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ546437.1|BJ546437 BJ546437 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ546657.1|BJ546657 BJ546657 K. Sato unpublished cDNA li... 58 7e-007
emb|AJ276226.1|HVU276226 Hordeum vulgare mRNA for chitinase... 58 7e-007
emb|X78672.1|HVCHT2B H.vulgare mRNA for chitinase 2b 58 7e-007
gb|BF065067.1|BF065067 HV_CEb0022N01f Hordeum vulgare seedl... 56 3e-006
gb|BF259671.3|BF259671 HVSMEf0019P07f Hordeum vulgare seedl... 56 3e-006
gb|BE196188.3|BE196188 HVSMEh0091J17f Hordeum vulgare 5-45 ... 56 3e-006
gb|AV908961.1|AV908961 AV908961 K. Sato unpublished cDNA li... 56 3e-006
gb|AV910846.1|AV910846 AV910846 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ449314.1|BJ449314 BJ449314 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ456780.1|BJ456780 BJ456780 K. Sato unpublished cDNA li... 56 3e-006
emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a 56 3e-006
gb|BF621706.2|BF621706 HVSMEa0011P10f Hordeum vulgare seedl... 54 1e-005
gb|BF619681.2|BF619681 HVSMEc0008I08f Hordeum vulgare seedl... 54 1e-005
gb|BE195941.2|BE195941 HVSMEh0090O16f Hordeum vulgare 5-45 ... 54 1e-005
gb|BG367072.1|BG367072 HVSMEi0010B13f Hordeum vulgare 20 DA... 54 1e-005
gb|BI950473.1|BI950473 HVSMEl0020N22f Hordeum vulgare spike... 54 1e-005
gb|BI953201.1|BI953201 HVSMEm0011K01f Hordeum vulgare green... 54 1e-005
gb|BI954227.1|BI954227 HVSMEm0016L11f Hordeum vulgare green... 54 1e-005
gb|BI955968.1|BI955968 HVSMEm0025D17f Hordeum vulgare green... 54 1e-005
gb|BF064990.1|BF064990 HV_CEb0022F13f Hordeum vulgare seedl... 54 1e-005
gb|BF265978.2|BF265978 HV_CEa0013N09f Hordeum vulgare seedl... 54 1e-005
gb|BE214577.2|BE214577 HV_CEb0003N19f Hordeum vulgare seedl... 54 1e-005
gb|BF065377.2|BF065377 HV_CEb0012E08f Hordeum vulgare seedl... 54 1e-005
gb|BG367233.2|BG367233 HVSMEi0011G09f Hordeum vulgare 20 DA... 54 1e-005
gb|BF265189.3|BF265189 HV_CEa0011I10f Hordeum vulgare seedl... 54 1e-005
gb|BF065825.3|BF065825 HV_CEb0014B14f Hordeum vulgare seedl... 54 1e-005
gb|BE559387.2|BE559387 HV_CEb0024H02f Hordeum vulgare seedl... 54 1e-005
gb|AV929266.1|AV929266 AV929266 K. Sato unpublished cDNA li... 54 1e-005
gb|BQ757610.1|BQ757610 EBem10_SQ004_K15_R embryo, 2 Day ger... 54 1e-005
gb|CA003742.1|CA003742 HS15G18r HS Hordeum vulgare subsp. v... 54 1e-005
gb|CA019311.1|CA019311 HV11J14r HV Hordeum vulgare subsp. v... 54 1e-005
gb|BJ544278.1|BJ544278 BJ544278 K. Sato unpublished cDNA li... 54 1e-005
gb|BJ544690.1|BJ544690 BJ544690 K. Sato unpublished cDNA li... 54 1e-005
gb|BJ545180.1|BJ545180 BJ545180 K. Sato unpublished cDNA li... 54 1e-005
gb|CB878161.1|CB878161 HP07J01T HP Hordeum vulgare subsp. v... 54 1e-005
gb|BI947443.1|BI947443 HVSMEl0005H24f Hordeum vulgare spike... 52 4e-005
gb|BF264498.2|BF264498 HV_CEa0009J09f Hordeum vulgare seedl... 52 4e-005
gb|BG365754.2|BG365754 HVSMEi0004B04f Hordeum vulgare 20 DA... 52 4e-005
gb|BM372862.1|BM372862 EBma04_SQ002_D08_R maternal, 10 DPA,... 52 4e-005
gb|BM444668.1|BM444668 EBem09_SQ006_C06_R embryo, 1 Day ger... 52 4e-005
gb|BJ453540.1|BJ453540 BJ453540 K. Sato unpublished cDNA li... 52 4e-005
gb|BJ461085.1|BJ461085 BJ461085 K. Sato unpublished cDNA li... 52 4e-005
gb|BJ543978.1|BJ543978 BJ543978 K. Sato unpublished cDNA li... 52 4e-005
gb|BF624096.2|BF624096 HVSMEa0009G20f Hordeum vulgare seedl... 50 2e-004
gb|BE421938.1|BE421938 HWM016cG.08r ITEC HWM Barley Leaf Li... 48 6e-004
gb|AL502023.1|AL502023 AL502023 Hordeum vulgare Barke roots... 48 6e-004
gb|BF624009.3|BF624009 HVSMEa0008J10f Hordeum vulgare seedl... 48 6e-004
gb|BF628657.2|BF628657 HVSMEb0006P01f Hordeum vulgare seedl... 48 6e-004
gb|BF631681.2|BF631681 HVSMEb0016O17f Hordeum vulgare seedl... 48 6e-004
gb|BI950475.1|BI950475 HVSMEl0020N24f Hordeum vulgare spike... 48 6e-004
gb|BI955596.1|BI955596 HVSMEm0023L14f Hordeum vulgare green... 48 6e-004
gb|BE214283.1|BE214283 HV_CEb0003A01f Hordeum vulgare seedl... 48 6e-004
gb|BF260800.3|BF260800 HVSMEf0022P16f Hordeum vulgare seedl... 48 6e-004
gb|BE519687.3|BE519687 HV_CEb0018G12f Hordeum vulgare seedl... 48 6e-004
gb|BM097251.1|BM097251 EBpi07_SQ002_O02_R pistil, 12 DPA, n... 48 6e-004
gb|AV910172.1|AV910172 AV910172 K. Sato unpublished cDNA li... 48 6e-004
gb|AV925874.1|AV925874 AV925874 K. Sato unpublished cDNA li... 48 6e-004
gb|AV926700.1|AV926700 AV926700 K. Sato unpublished cDNA li... 48 6e-004
gb|AV931601.1|AV931601 AV931601 K. Sato unpublished cDNA li... 48 6e-004
gb|BJ449474.1|BJ449474 BJ449474 K. Sato unpublished cDNA li... 48 6e-004
gb|BJ451072.1|BJ451072 BJ451072 K. Sato unpublished cDNA li... 48 6e-004
gb|BJ458220.1|BJ458220 BJ458220 K. Sato unpublished cDNA li... 48 6e-004
gb|BJ458576.1|BJ458576 BJ458576 K. Sato unpublished cDNA li... 48 6e-004
gb|BJ459434.1|BJ459434 BJ459434 K. Sato unpublished cDNA li... 48 6e-004
gb|BQ660441.1|BQ660441 HI02J08u HI Hordeum vulgare subsp. v... 48 6e-004
gb|BM371578.2|BM371578 EBma08_SQ003_E01_R maternal, 28 DPA,... 48 6e-004
gb|BQ768685.1|BQ768685 EBro08_SQ012_K12_R root, 3 week, dro... 48 6e-004
gb|CA031549.1|CA031549 HX10F18r HX Hordeum vulgare subsp. v... 48 6e-004
gb|BJ545495.1|BJ545495 BJ545495 K. Sato unpublished cDNA li... 48 6e-004
gb|CB877320.1|CB877320 HP04G13T HP Hordeum vulgare subsp. v... 48 6e-004
gb|CB879385.1|CB879385 HP02A05w HP Hordeum vulgare subsp. v... 48 6e-004
gb|BI951414.1|BI951414 HVSMEl0025N19f Hordeum vulgare spike... 46 0.003
gb|BI951463.1|BI951463 HVSMEm0001A11f Hordeum vulgare green... 46 0.003
gb|BI952917.1|BI952917 HVSMEm0008F23f Hordeum vulgare green... 46 0.003
gb|BI953910.1|BI953910 HVSMEm0015F08f Hordeum vulgare green... 46 0.003
gb|BI955638.1|BI955638 HVSMEm0023N21f Hordeum vulgare green... 46 0.003
gb|BE216024.1|BE216024 HV_CEb0009C12f Hordeum vulgare seedl... 46 0.003
gb|BE559371.1|BE559371 HV_CEb0024F08f Hordeum vulgare seedl... 46 0.003
gb|BF066058.1|BF066058 HV_CEb0014L16f Hordeum vulgare seedl... 46 0.003
gb|BF265236.1|BF265236 HV_CEa0011O17f Hordeum vulgare seedl... 46 0.003
gb|BF266125.2|BF266125 HV_CEa0014D24f Hordeum vulgare seedl... 46 0.003
gb|BF065694.2|BF065694 HV_CEb0013H08f Hordeum vulgare seedl... 46 0.003
gb|BF257510.3|BF257510 HVSMEf0013B19f Hordeum vulgare seedl... 46 0.003
gb|BE601550.3|BE601550 HVSMEh0098G04f Hordeum vulgare 5-45 ... 46 0.003
gb|BG367944.2|BG367944 HVSMEi0014P08f Hordeum vulgare 20 DA... 46 0.003
gb|BE215473.3|BE215473 HV_CEb0006O09f Hordeum vulgare seedl... 46 0.003
gb|BM444141.1|BM444141 EBem09_SQ004_E15_R embryo, 1 Day ger... 46 0.003
gb|BI780166.2|BI780166 EBma08_SQ001_J11_R maternal, 28 DPA,... 46 0.003
gb|BM371518.2|BM371518 EBma08_SQ003_A17_R maternal, 28 DPA,... 46 0.003
gb|BM371743.2|BM371743 EBma08_SQ003_M18_R maternal, 28 DPA,... 46 0.003
gb|BQ768408.1|BQ768408 EBro08_SQ011_K13_R root, 3 week, dro... 46 0.003
gb|BG365763.1|BG365763 HVSMEi0004B22f Hordeum vulgare 20 DA... 44 0.010
gb|BG366186.1|BG366186 HVSMEi0006C19f Hordeum vulgare 20 DA... 44 0.010
gb|BG368849.1|BG368849 HVSMEi0020O23f Hordeum vulgare 20 DA... 44 0.010
gb|BM369832.2|BM369832 EBem07_SQ004_L21_R embryo, 28 DPA, n... 44 0.010
gb|BE214365.3|BE214365 HV_CEb0003D21f Hordeum vulgare seedl... 42 0.040
gb|BM444050.1|BM444050 EBem09_SQ004_A02_R embryo, 1 Day ger... 42 0.040
gb|BJ458244.1|BJ458244 BJ458244 K. Sato unpublished cDNA li... 42 0.040
gb|BE193661.2|BE193661 HVSMEh0082C02f Hordeum vulgare 5-45 ... 40 0.16
gb|BI949249.1|BI949249 HVSMEl0013A02f Hordeum vulgare spike... 40 0.16
gb|BI954922.1|BI954922 HVSMEm0020H05f Hordeum vulgare green... 40 0.16
gb|BE215793.1|BE215793 HV_CEb0008I03f Hordeum vulgare seedl... 40 0.16
gb|BE559148.1|BE559148 HV_CEb0023K15f Hordeum vulgare seedl... 40 0.16
gb|BF264615.1|BF264615 HV_CEa0009O11f Hordeum vulgare seedl... 40 0.16
gb|BG368270.2|BG368270 HVSMEi0017F02f Hordeum vulgare 20 DA... 40 0.16
gb|BF262973.2|BF262973 HV_CEa0005H11f Hordeum vulgare seedl... 40 0.16
gb|AV924171.1|AV924171 AV924171 K. Sato unpublished cDNA li... 40 0.16
>gb|BG367460.1|BG367460 HVSMEi0012F13f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012F13f, mRNA sequence
Length = 705
Score = 216 bits (109), Expect = 1e-054
Identities = 226/265 (85%)
Strand = Plus / Minus
Query: 629 ttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtc 688
||||||||||||||||||| |||||| |||||||||||||||| ||||||||| || |||
Sbjct: 551 ttgaagcagtagccccaggagtaggggccgtcgggcgccgtcggccacccgccggtggtc 492
Query: 689 tcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggcgccccc 748
|||||||| ||||| || |||||||| |||| |||||||||| ||||||| | |||
Sbjct: 491 tcgtgggaggtctgtgcgaggaacgcggccacctcgcgcttcctgacgtcggtgccaccc 432
Query: 749 gtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaag 808
||||| ||||||||||||||| |||||| || |||| |||| | ||||| |||||||
Sbjct: 431 gtggtcgcgaagcccgggaacgagttggcggcggcgacgaaggcgccgtagttgtagaac 372
Query: 809 ccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcgactcg 868
|| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 371 cccttggcctggcacgccgcatcgttgcggtgcagcagcatctggtcgaagagcgactgc 312
Query: 869 gggatgatggacgccacgccgccgc 893
| ||| ||||| | |||||||||||
Sbjct: 311 gagataatggaggacacgccgccgc 287
Score = 105 bits (53), Expect = 3e-021
Identities = 104/121 (85%)
Strand = Plus / Minus
Query: 480 cggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatatctggatgggcc 539
|||||||||||||| ||| || |||| |||||||||||||| ||| |||||||||||||
Sbjct: 694 cggcgccgatggcccggcatgccggccggtagttgtagttgtgggagatctggatgggcc 635
Query: 540 cgcggccgtagtacttcttccccgcggcgcacggccactgggcgctgggctcgcagtagt 599
|||| ||| |||||||||| |||| |||||||||||||| | ||| ||| ||||||||
Sbjct: 634 cgcgcccgaagtacttcttgcccggcgcgcacggccactgcgagctcggcgtgcagtagt 575
Query: 600 c 600
|
Sbjct: 574 c 574
Score = 101 bits (51), Expect = 5e-020
Identities = 109/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccaccc 982
|||| |||||||||| ||||| ||| |||||||||||||||| | | |||||| | ||
Sbjct: 243 gccgttgcactggctttggcagccggtgccgcagtagtcggaggtggagccgcagaagcc 184
Query: 983 gaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactg 1042
|||| ||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||
Sbjct: 183 gaacctgctgcagcagaggcagttggggcacgtcgccccgccggcctgcgagccgcactg 124
Query: 1043 ctcggcg 1049
|||||||
Sbjct: 123 ctcggcg 117
>gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002L21f, mRNA sequence
Length = 839
Score = 216 bits (109), Expect = 1e-054
Identities = 226/265 (85%)
Strand = Plus / Minus
Query: 629 ttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtc 688
||||||||||||||||||| |||||| |||||||||||||||| ||||||||| || |||
Sbjct: 340 ttgaagcagtagccccaggagtaggggccgtcgggcgccgtcggccacccgccggtggtc 281
Query: 689 tcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggcgccccc 748
|||||||| ||||| || |||||||| |||| |||||||||| ||||||| | |||
Sbjct: 280 tcgtgggaggtctgtgcgaggaacgcggccacctcgcgcttcctgacgtcggtgccaccc 221
Query: 749 gtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaag 808
||||| ||||||||||||||| |||||| || |||| |||| | ||||| |||||||
Sbjct: 220 gtggtcgcgaagcccgggaacgagttggcggcggcgacgaaggcgccgtagttgtagaac 161
Query: 809 ccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcgactcg 868
|| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 160 cccttggcctggcacgccgcatcgttgcggtgcagcagcatctggtcgaagagcgactgc 101
Query: 869 gggatgatggacgccacgccgccgc 893
| ||| ||||| | |||||||||||
Sbjct: 100 gagataatggaggacacgccgccgc 76
Score = 172 bits (87), Expect = 2e-041
Identities = 207/247 (83%)
Strand = Plus / Minus
Query: 354 tccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcatccaga 413
||||| |||| || || |||||||||| ||| || ||||| |||||||||||||||||||
Sbjct: 609 tccacggcccggtgatcacgtcgtggctcgaaggtttgggtgactgcggcgtcatccaga 550
Query: 414 accagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggttggcga 473
|||| | || |||| ||| |||||||| | ||| || ||||| |||||||||||| ||
Sbjct: 549 accacaacgccgtcttgaaggacacggtcgcgtcagtcgccacgaggtccgggttgttga 490
Query: 474 ggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatatctgga 533
| | | |||||||||||||| | || || ||||||||||||||||||| ||| |||||||
Sbjct: 489 gcaggtcggcgccgatggcccgccctgccggcccgtagttgtagttgtgggagatctgga 430
Query: 534 tgggcccgcggccgtagtacttcttccccgcggcgcacggccactgggcgctgggctcgc 593
|||||||||| ||| |||||||||| |||| |||||||||||||| | ||| ||| ||
Sbjct: 429 tgggcccgcgcccgaagtacttcttgcccggcgcgcacggccactgcgagctcggcgtgc 370
Query: 594 agtagtc 600
|||||||
Sbjct: 369 agtagtc 363
>gb|BI949350.1|BI949350 HVSMEl0013H11f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013H11f, mRNA sequence
Length = 830
Score = 208 bits (105), Expect = 3e-052
Identities = 225/265 (84%)
Strand = Plus / Minus
Query: 629 ttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtc 688
||||||||||||||||||| |||||| | |||||||||||||| ||||||||| || |||
Sbjct: 530 ttgaagcagtagccccaggagtaggggctgtcgggcgccgtcggccacccgccggtggtc 471
Query: 689 tcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggcgccccc 748
|||||||| ||||| || |||||||| |||| |||||||||| ||||||| | |||
Sbjct: 470 tcgtgggaggtctgtgcgaggaacgcggccacctcgcgcttcctgacgtcggtgccaccc 411
Query: 749 gtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaag 808
||||| ||||||||||||||| |||||| || |||| |||| | ||||| |||||||
Sbjct: 410 gtggtcgcgaagcccgggaacgagttggcggcggcgacgaaggcgccgtagttgtagaac 351
Query: 809 ccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcgactcg 868
|| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 350 cccttggcctggcacgccgcatcgttgcggtgcagcagcatctggtcgaagagcgactgc 291
Query: 869 gggatgatggacgccacgccgccgc 893
| ||| ||||| | |||||||||||
Sbjct: 290 gagataatggaggacacgccgccgc 266
Score = 101 bits (51), Expect = 5e-020
Identities = 109/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccaccc 982
|||| |||||||||| ||||| ||| |||||||||||||||| | | |||||| | ||
Sbjct: 222 gccgttgcactggctttggcagccggtgccgcagtagtcggaggtggagccgcagaagcc 163
Query: 983 gaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactg 1042
|||| ||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||
Sbjct: 162 gaacctgctgcagcagaggcagttggggcacgtcgccccgccggcctgcgagccgcactg 103
Query: 1043 ctcggcg 1049
|||||||
Sbjct: 102 ctcggcg 96
Score = 58.0 bits (29), Expect = 7e-007
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 501 cgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttcttcc 560
||||| ||||||||||||||| | | || |||||||||||||| | |||||||||| |
Sbjct: 652 cgggcacgtagttgtagttgtggcagatntggatgggcccgcgccaaaagtacttcttgc 593
Query: 561 ccgcggcgcacggcca 576
||| |||||||||||
Sbjct: 592 ccggcgcgcacggcca 577
>gb|BG367616.2|BG367616 HVSMEi0012P08f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012P08f, mRNA sequence
Length = 710
Score = 186 bits (94), Expect = 1e-045
Identities = 214/254 (84%)
Strand = Plus / Minus
Query: 640 gccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtctcgtgggacgt 699
|||||||| |||||| |||||||||||||||| ||||||||| || ||||||||| | ||
Sbjct: 538 gccccaggagtaggggccgtcgggcgccgtcggccacccgccggtggtctcgtggaaggt 479
Query: 700 ctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggcgcccccgtggtgccgaa 759
||| || |||||||| |||| |||||||||| ||||||| | |||||||| ||||
Sbjct: 478 ctgtgcgaggaacgcggccacctcgcgcttcctgacgtcggtgccacccgtggtcgcgaa 419
Query: 760 gcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttggcggg 819
||||||||||| |||||| || |||| |||| | ||||| ||||||| || ||||| |
Sbjct: 418 gcccgggaacgagttggcggcggcgacgaaggcgccgtagttgtagaaccccttggcctg 359
Query: 820 gcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcgactcggggatgatgga 879
||||||||| ||||||||||||||||||||||||| ||||||||||| | ||| |||||
Sbjct: 358 gcacgccgcatcgttgcggtgcagcagcatctggtcgaagagcgactgcgagataatgga 299
Query: 880 cgccacgccgccgc 893
| |||||||||||
Sbjct: 298 ggacacgccgccgc 285
Score = 111 bits (56), Expect = 5e-023
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 480 cggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatatctggatgggcc 539
|||||||||||||| | || || ||||||||||||||||||| ||| |||||||||||||
Sbjct: 693 cggcgccgatggcccgccctgccggcccgtagttgtagttgtgggagatctggatgggcc 634
Query: 540 cgcggccgtagtacttcttccccgcggcgcacggccactg 579
|||| ||| |||||||||| |||| ||||||||||||||
Sbjct: 633 cgcgcccgaagtacttcttgcccggcgcgcacggccactg 594
Score = 101 bits (51), Expect = 5e-020
Identities = 109/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccaccc 982
|||| |||||||||| ||||| ||| |||||||||||||||| | | |||||| | ||
Sbjct: 241 gccgttgcactggctttggcagccggtgccgcagtagtcggaggtggagccgcagaagcc 182
Query: 983 gaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactg 1042
|||| ||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||
Sbjct: 181 gaacctgctgcagcagaggcagttggggcacgtcgccccgccggcctgcgagccgcactg 122
Query: 1043 ctcggcg 1049
|||||||
Sbjct: 121 ctcggcg 115
>gb|BM371934.2|BM371934 EBma08_SQ004_H03_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_H03 5', mRNA sequence
Length = 380
Score = 172 bits (87), Expect = 2e-041
Identities = 222/267 (83%)
Strand = Plus / Minus
Query: 629 ttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtc 688
|||||||||||||||||| |||||| ||||||||| | |||| ||||||||| || |||
Sbjct: 363 ttgaagcagtagccccagtagtaggggccgtcgggctcagtcggccacccgccggtggtc 304
Query: 689 tcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggcgccccc 748
|||||||| ||||| || |||||| | |||| |||||||||| ||||||| | |||
Sbjct: 303 tcgtgggaggtctgtgctaggaactcggccacctcgcgcttcctgacgtcggtgccaccc 244
Query: 749 gtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaag 808
||||| ||||||||||||| | |||||| || |||| |||| | ||||| |||||||
Sbjct: 243 gtggtcgcgaagcccgggaatgagttggcggcggcgacgaaggctccgtagttgtagaac 184
Query: 809 ccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcgactcg 868
|| ||||| |||||||||| |||||||||||||||||||| |||| |||||||||||
Sbjct: 183 cccttggcttggcacgccgcatcgttgcggtgcagcagcatatggtcgaagagcgactgc 124
Query: 869 gggatgatggacgccacgccgccgctg 895
| ||| ||||| | |||||||||||||
Sbjct: 123 gagataatggaggacacgccgccgctg 97
Score = 52.0 bits (26), Expect = 4e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcgga 965
|||| |||||||||| ||||| ||| ||||||||||||||||
Sbjct: 54 gccgttgcactggctttggcagccggtgccgcagtagtcgga 13
>gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003B22f, mRNA sequence
Length = 805
Score = 168 bits (85), Expect = 3e-040
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 544 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 485
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 484 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 425
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 424 ccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgc 365
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 364 ttcccgggggcgcacggccactgtgcgct 336
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 304 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 245
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 244 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 186
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 185 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 126
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 125 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 82
>gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012B07f, mRNA sequence
Length = 854
Score = 168 bits (85), Expect = 3e-040
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 256 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 197
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 196 acagtggcgtccgtggccaccaggtccgggttggccagcagctcgcccccgatggcccgg 137
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 136 ccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgc 77
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 76 ttcccgggggcgcacggccactgtgcgct 48
>gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003J19f, mRNA sequence
Length = 625
Score = 168 bits (85), Expect = 3e-040
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 236 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 177
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 176 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 117
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 116 ccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgc 57
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 56 ttcccgggggcgcacggccactgtgcgct 28
>gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005I16f, mRNA sequence
Length = 908
Score = 168 bits (85), Expect = 3e-040
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 360 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 301
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 300 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 241
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 240 ccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgc 181
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 180 ttcccgggggcgcacggccactgtgcgct 152
Score = 107 bits (54), Expect = 8e-022
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 120 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 61
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctg 732
|| ||||||||||| || || |||||||| || |||| ||||||||||||
Sbjct: 60 gtggtctcgtgggaggtttgggccaggaaggcggccacctcgcgcttctg 11
>gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014F08f, mRNA sequence
Length = 682
Score = 168 bits (85), Expect = 3e-040
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 560 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 501
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 500 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 441
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 440 ccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgc 381
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 380 ttcccgggggcgcacggccactgtgcgct 352
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 320 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 261
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 260 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 202
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 201 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 142
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 141 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 98
>gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094A02f, mRNA sequence
Length = 688
Score = 168 bits (85), Expect = 3e-040
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 280 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 221
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 220 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 161
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 160 ccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgc 101
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 100 ttcccgggggcgcacggccactgtgcgct 72
Score = 52.0 bits (26), Expect = 4e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtc 660
|||| |||||||||||||||||||||| ||| ||||||
Sbjct: 40 tcctgcttgaagcagtagccccaggcgaaggccccgtc 3
>gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003I02f, mRNA sequence
Length = 741
Score = 168 bits (85), Expect = 3e-040
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 628 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 569
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 568 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 509
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 508 ccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgc 449
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 448 ttcccgggggcgcacggccactgtgcgct 420
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 388 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 329
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 328 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 270
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 269 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 210
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 209 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 166
>gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024B14f, mRNA sequence
Length = 904
Score = 168 bits (85), Expect = 3e-040
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 280 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 221
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 220 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 161
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 160 ccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgc 101
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 100 ttcccgggggcgcacggccactgtgcgct 72
Score = 52.0 bits (26), Expect = 4e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtc 660
|||| |||||||||||||||||||||| ||| ||||||
Sbjct: 40 tcctgcttgaagcagtagccccaggcgaaggccccgtc 3
>gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002N14f, mRNA sequence
Length = 805
Score = 161 bits (81), Expect = 6e-038
Identities = 177/209 (84%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| |||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 636 tggctcgacggcttgggcggttgcgccgtcatccagaaccagatggccgtcttaaacgcc 577
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 576 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 517
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 516 ccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgc 457
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 456 ttcccgggggcgcacggccactgtgcgct 428
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 396 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 337
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 336 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 278
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 277 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 218
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 217 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 174
>gb|BI954237.1|BI954237 HVSMEm0016M07f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0016M07f, mRNA sequence
Length = 676
Score = 157 bits (79), Expect = 1e-036
Identities = 214/259 (82%)
Strand = Plus / Minus
Query: 635 cagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtctcgtgg 694
|||||||||||| |||||| ||||||||| |||||| |||||| | || |||||||||
Sbjct: 540 cagtagccccagaagtagggtccgtcgggcaccgtcggccacccccgggtggtctcgtgg 481
Query: 695 gacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggcgcccccgtggtg 754
| ||||| || |||||||| |||| |||||||||| ||||||| | ||||||||
Sbjct: 480 aaggtctgtgcgaggaacgcggccacctcgcgcttcctgacgtcggtgccacccgtggtc 421
Query: 755 ccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttg 814
||||||||||||||| |||||| || |||| ||| | ||||| ||||||| || |||
Sbjct: 420 gcgaagcccgggaacgagttggcggcggcgagaaaggcgccgtagttgtagaaccccttg 361
Query: 815 gcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcgactcggggatg 874
|| |||||||||| ||||||||||||||||||||||||| ||||||||||| | |||
Sbjct: 360 gcctggcacgccgcatcgttgcggtgcagcagcatctggtcgaagagcgactgcgagata 301
Query: 875 atggacgccacgccgccgc 893
||||| | |||||||||||
Sbjct: 300 atggaggacacgccgccgc 282
Score = 101 bits (51), Expect = 5e-020
Identities = 109/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccaccc 982
|||| |||||||||| ||||| ||| |||||||||||||||| | | |||||| | ||
Sbjct: 238 gccgttgcactggctttggcagccggtgccgcagtagtcggaggtggagccgcagaagcc 179
Query: 983 gaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactg 1042
|||| ||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||
Sbjct: 178 gaacctgctgcagcagaggcagttggggcacgtcgccccgccggcctgcgagccgcactg 119
Query: 1043 ctcggcg 1049
|||||||
Sbjct: 118 ctcggcg 112
>gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093N17f, mRNA sequence
Length = 968
Score = 155 bits (78), Expect = 4e-036
Identities = 176/209 (84%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| |||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 646 tggctcgacggcttgggcggntgcgccgtcatccagaaccagatggccgtcttaaacgcc 587
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 586 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 527
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||| ||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 526 ccggcaggtccatagttctagttgtgggagagctggatgggcccgcggccgtagtagcgc 467
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 466 ttcccgggggcgcacggccactgtgcgct 438
Score = 119 bits (60), Expect = 2e-025
Identities = 176/212 (83%), Gaps = 2/212 (0%)
Strand = Plus / Minus
Query: 635 cagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtctcgtgg 694
||||||||||||||| ||| |||||| || ||||||||||| ||||| || |||||||||
Sbjct: 385 cagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccggtggtctcgtgg 326
Query: 695 gacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggcgc-ccccgtggt 753
|| ||||| |||||||| || |||| |||||||||||| |||| ||||| || ||| |
Sbjct: 325 gaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggcgctgccggtgct 267
Query: 754 gccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgtt 813
||||||||||||||| || || || |||| |||| | |||||||||||||||| ||
Sbjct: 266 gccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggtgtagaagccctt 207
Query: 814 ggcggggcacgccgcgtcgttgcggtgcagca 845
||| |||| || ||||||||||||||||||
Sbjct: 206 ggcctggcaggcgccgtcgttgcggtgcagca 175
>gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101A21f, mRNA sequence
Length = 730
Score = 155 bits (78), Expect = 4e-036
Identities = 178/210 (84%), Gaps = 1/210 (0%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 567 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 508
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 507 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 448
Query: 497 -ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtactt 555
||||| || || ||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 447 cccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcg 388
Query: 556 cttccccgcggcgcacggccactgggcgct 585
|||||| | ||||||||||||||| |||||
Sbjct: 387 cttcccgggggcgcacggccactgtgcgct 358
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 326 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 267
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 266 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 208
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 207 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 148
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 147 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 104
>gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006N24f, mRNA sequence
Length = 710
Score = 155 bits (78), Expect = 4e-036
Identities = 178/210 (84%), Gaps = 1/210 (0%)
Strand = Plus / Minus
Query: 377 tggcacgacggctt-gggcgactgcggcgtcatccagaaccagacggcggtctcgaacga 435
|||| ||||||||| ||||| ||||| ||||||||||||||||| ||| |||| ||||
Sbjct: 632 tggctcgacggctttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgc 573
Query: 436 cacggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctg 495
||| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| |
Sbjct: 572 cacagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccg 513
Query: 496 gccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtactt 555
|||||| || || ||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 512 gccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcg 453
Query: 556 cttccccgcggcgcacggccactgggcgct 585
|||||| | ||||||||||||||| |||||
Sbjct: 452 cttcccgggggcgcacggccactgtgcgct 423
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 391 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 332
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 331 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 273
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 272 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 213
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 212 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 169
>gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025B12f, mRNA sequence
Length = 691
Score = 153 bits (77), Expect = 2e-035
Identities = 176/209 (84%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||| ||||||| |||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 628 tggctcgacggtttgggcggatgcgccgtcatccagaaccagatggccgtcttaaacgcc 569
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 568 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 509
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 508 ccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgc 449
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 448 ttcccgggggcgcacggccactgtgcgct 420
Score = 111 bits (56), Expect = 5e-023
Identities = 184/224 (82%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 388 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 329
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| ||||||||| || |||| |||
Sbjct: 328 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttatgggcgtc-ggc 270
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||| ||||| || || || |||| |||| | |||||||
Sbjct: 269 gctgccggtgctgccgaagcctgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 210
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || |||||||||||||||||
Sbjct: 209 gtagaagcccttggcctggcaggcgctgtcgttgcggtgcagca 166
>gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0019F09f, mRNA sequence
Length = 436
Score = 149 bits (75), Expect = 2e-034
Identities = 171/203 (84%)
Strand = Plus / Minus
Query: 383 gacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgacacggtg 442
||||||||||||| ||||| ||||||||||||||||| ||| || | |||| ||| |||
Sbjct: 232 gacggcttgggcggctgcgccgtcatccagaaccagatggccgttttaaacgccacagtg 173
Query: 443 gggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctggccggcg 502
| ||| ||||||||||||||||||||||| || | || | ||||||||| |||||||
Sbjct: 172 gcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccggccggca 113
Query: 503 ggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttcttcccc 562
|| || ||||||||||||| ||| | |||||||||||||||||||||||| ||||||
Sbjct: 112 ggtccatagttgtagttgttggagagctggatgggcccgcggccgtagtagcgcttcccg 53
Query: 563 gcggcgcacggccactgggcgct 585
| |||||||| |||||| |||||
Sbjct: 52 ggggcgcacgcccactgtgcgct 30
>gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0014A17f, mRNA sequence
Length = 872
Score = 145 bits (73), Expect = 4e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||||||||| |||| ||| | ||||||||| ||||| | || |||| ||||||
Sbjct: 600 tggctcgacggctttggcgcctgggccgtcatccaaaaccacatcgcagtcttaaacgac 541
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
||||| ||||| ||||||||||||||||||||| |||| | || | ||||||||| ||
Sbjct: 540 acggtcgggtccgtggccaccaggtccgggttgcgcaggaggtcgaccccgatggcccgg 481
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
|| || ||||||||||||||||||| ||| | |||||| ||||| ||||||||||| ||
Sbjct: 480 cccgcaggcccgtagttgtagttgtgggagagctggatcggcccacggccgtagtagctc 421
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 420 ttccctggggcgcacggccactgcgcgct 392
Score = 121 bits (61), Expect = 5e-026
Identities = 187/229 (81%)
Strand = Plus / Minus
Query: 621 gctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgc 680
|||||| |||||||||||||||||||||| | | ||||| || ||||||||||||||||
Sbjct: 362 gctcctgcttgaagcagtagccccaggcgaaagctccgtccggtgccgtcgcccacccgc 303
Query: 681 ccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgg 740
| || ||||||||||| ||||| |||||||| || |||| |||||||||| | |||||
Sbjct: 302 cggtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttccgggtgtcgg 243
Query: 741 gcgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtagg 800
| || ||||||||||||||| |||| ||| || || |||| |||| | ||||||
Sbjct: 242 tgccgccggtggtgccgaagccccggaaggcggatgcggcggcgacgaaggcgtcgtagg 183
Query: 801 tgtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcat 849
|||||||||| ||||| |||| || ||||||||||||| || |||||
Sbjct: 182 tgtagaagcccttggcctggcaggcgccgtcgttgcggtggagaagcat 134
>gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096L08f, mRNA sequence
Length = 710
Score = 145 bits (73), Expect = 4e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| |||| ||||||||||||||||| ||| |||| | | |
Sbjct: 631 tggctcgacggcttgggcggttgcgccgtcatccagaaccagatggccgtcttaacggcc 572
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 571 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 512
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||||||||||||||||||||| |
Sbjct: 511 ccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgc 452
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 451 ttcccgggggcgcacggccactgtgcgct 423
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 391 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 332
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 331 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 273
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 272 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 213
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 212 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 169
>gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25c19 5', mRNA sequence
Length = 540
Score = 145 bits (73), Expect = 4e-033
Identities = 286/357 (80%)
Strand = Plus / Minus
Query: 165 tctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagtatcgtt 224
|||||||| |||||||| |||||| ||||||||||| || || | || ||||| || |
Sbjct: 359 tctggttgtagcagtccaggttgtctccgtagctgacgccgaggagatcgcagtagcgct 300
Query: 225 tgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcgaggccgc 284
||||||| |||||||||||||| |||||| ||| || | ||||||||||| || |
Sbjct: 299 tgtagaacccgatccggtcggctacgcgggcgtcctgcccgcgcccgcactcgagcccac 240
Query: 285 cgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtcagccg 344
|||||||||||||||||| |||||||| || |||| ||| || || ||| ||| |
Sbjct: 239 cgttgatgatgttggtgatcacgccgtacccaggcaccctccctgccgcctggtcggtgc 180
Query: 345 cggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcg 404
| ||||| ||||| | || || || |||||||||| ||| || ||||| ||||||||||
Sbjct: 179 ccgaggggctccaccggccggtgatcacgtcgtggctcgaaggtttgggtgactgcggcg 120
Query: 405 tcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccg 464
||||||||||||| | || |||| ||| |||||||| | ||| || ||||| |||||||
Sbjct: 119 tcatccagaaccacaacgccgtcttgaaggacacggtcgcgtccgtcgccacgaggtccg 60
Query: 465 ggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgt 521
||||| ||| | | |||||||||||||| | || || |||||||||||||||||||
Sbjct: 59 ggttgttgagcaggtcggcgccgatggcccgccctgccggcccgtagttgtagttgt 3
>gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25c19 3', mRNA sequence
Length = 534
Score = 145 bits (73), Expect = 4e-033
Identities = 286/357 (80%)
Strand = Plus / Plus
Query: 165 tctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagtatcgtt 224
|||||||| |||||||| |||||| ||||||||||| || || | || ||||| || |
Sbjct: 176 tctggttgtagcagtccaggttgtctccgtagctgacgccgaggagatcgcagtagcgct 235
Query: 225 tgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcgaggccgc 284
||||||| |||||||||||||| |||||| ||| || | ||||||||||| || |
Sbjct: 236 tgtagaacccgatccggtcggctacgcgggcgtcctgcccgcgcccgcactcgagcccac 295
Query: 285 cgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtcagccg 344
|||||||||||||||||| |||||||| || |||| ||| || || ||| ||| |
Sbjct: 296 cgttgatgatgttggtgatcacgccgtacccaggcaccctccctgccgcctggtcggtgc 355
Query: 345 cggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcg 404
| ||||| ||||| | || || || |||||||||| ||| || ||||| ||||||||||
Sbjct: 356 ccgaggggctccaccggccggtgatcacgtcgtggctcgaaggtttgggtgactgcggcg 415
Query: 405 tcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccg 464
||||||||||||| | || |||| ||| |||||||| | ||| || ||||| |||||||
Sbjct: 416 tcatccagaaccacaacgccgtcttgaaggacacggtcgcgtccgtcgccacgaggtccg 475
Query: 465 ggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgt 521
||||| ||| | | |||||||||||||| | || || |||||||||||||||||||
Sbjct: 476 ggttgttgagcaggtcggcgccgatggcccgccctgccggcccgtagttgtagttgt 532
>gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. vulgare cDNA clone HT01C02
5-PRIME, mRNA sequence
Length = 642
Score = 145 bits (73), Expect = 4e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||| |||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 275 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 216
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 215 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 156
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||| ||||||||||||||||| |
Sbjct: 155 ccggcaggtccatagttgtagttgtgggagagctggatcggcccgcggccgtagtagcgc 96
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | |||||||||||| || |||||
Sbjct: 95 ttcccgggggcgcacggccattgtgcgct 67
Score = 71.9 bits (36), Expect = 4e-011
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 211 gtcacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggcc 270
||||||||| || ||||| || ||||| || ||||||||||||||||| || || ||
Sbjct: 441 gtcacagtagcgcttgtaaaacccgattcgatcggcgacgcggctgtcctgcccgtgacc 382
Query: 271 gcactcgaggccgccgttgatgatgttggtga 302
|||||||| ||||||||||||||||||||||
Sbjct: 381 gcactcgatcccgccgttgatgatgttggtga 350
Score = 44.1 bits (22), Expect = 0.010
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggc 648
|||| |||||||||||||||||||||
Sbjct: 35 tcctgcttgaagcagtagccccaggc 10
>gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. vulgare cDNA clone HT02N08
5-PRIME, mRNA sequence
Length = 536
Score = 145 bits (73), Expect = 4e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||| |||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 285 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 226
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 225 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 166
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||| ||||||||||||||||| |
Sbjct: 165 ccggcaggtccatagttgtagttgtgggagagctggatcggcccgcggccgtagtagcgc 106
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | |||||||||||| || |||||
Sbjct: 105 ttcccgggggcgcacggccattgtgcgct 77
Score = 71.9 bits (36), Expect = 4e-011
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 211 gtcacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggcc 270
||||||||| || ||||| || ||||| || ||||||||||||||||| || || ||
Sbjct: 451 gtcacagtagcgcttgtaaaacccgattcgatcggcgacgcggctgtcctgcccgtgacc 392
Query: 271 gcactcgaggccgccgttgatgatgttggtga 302
|||||||| ||||||||||||||||||||||
Sbjct: 391 gcactcgatcccgccgttgatgatgttggtga 360
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcg 649
|||| ||||||||||||||||||||||
Sbjct: 45 tcctgcttgaagcagtagccccaggcg 19
>gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_M10 5', mRNA sequence
Length = 646
Score = 145 bits (73), Expect = 4e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||| |||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 616 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 557
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 556 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 497
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||| ||||||||||||||||| |
Sbjct: 496 ccggcaggtccatagttgtagttgtgggagagctggatcggcccgcggccgtagtagcgc 437
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | |||||||||||| || |||||
Sbjct: 436 ttcccgggggcgcacggccattgtgcgct 408
Score = 135 bits (68), Expect = 4e-030
Identities = 190/228 (83%), Gaps = 2/228 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || || ||||||||||||||
Sbjct: 376 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgcagtcgcccacccgccg 317
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| || ||||| || |||| |||||||||||| |||| |||
Sbjct: 316 gtggtctcgtgggaggtctgtgctaggaaggcggccacctcgcgcttctgggcgtc-ggc 258
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || |||||||||||||||||||| ||| || || |||| |||| | |||||||
Sbjct: 257 gctgccggtggtgccgaagcccgggaaggcggctgcggcggcgacgaaggcgtcgtaggt 198
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcat 849
||||||||| ||||| |||| || ||||||||||||| || |||||
Sbjct: 197 gtagaagcccttggcctggcaggcgccgtcgttgcggtggagaagcat 150
>gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_D14 5', mRNA sequence
Length = 647
Score = 145 bits (73), Expect = 4e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||| |||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 290 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 231
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 230 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 171
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||| ||||||||||||||||| |
Sbjct: 170 ccggcaggtccatagttgtagttgtgggagagctggatcggcccgcggccgtagtagcgc 111
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | |||||||||||| || |||||
Sbjct: 110 ttcccgggggcgcacggccattgtgcgct 82
Score = 71.9 bits (36), Expect = 4e-011
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 211 gtcacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggcc 270
||||||||| || ||||| || ||||| || ||||||||||||||||| || || ||
Sbjct: 456 gtcacagtagcgcttgtaaaacccgattcgatcggcgacgcggctgtcctgcccgtgacc 397
Query: 271 gcactcgaggccgccgttgatgatgttggtga 302
|||||||| ||||||||||||||||||||||
Sbjct: 396 gcactcgatcccgccgttgatgatgttggtga 365
Score = 52.0 bits (26), Expect = 4e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtc 660
|||| |||||||||||||||||||||| ||| ||||||
Sbjct: 50 tcctgcttgaagcagtagccccaggcgaaggccccgtc 13
>gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ003_C16 5', mRNA sequence
Length = 305
Score = 145 bits (73), Expect = 4e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||| |||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 225 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 166
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 165 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 106
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||| ||||||||||||||||| |
Sbjct: 105 ccggcaggtccatagttgtagttgtgggagagctggatcggcccgcggccgtagtagcgc 46
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | |||||||||||| || |||||
Sbjct: 45 ttcccgggggcgcacggccattgtgcgct 17
>gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_G15 5', mRNA sequence
Length = 552
Score = 145 bits (73), Expect = 4e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||| |||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 477 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 418
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 417 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 358
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||| ||||||||||||||||| |
Sbjct: 357 ccggcaggtccatagttgtagttgtgggagagctggatcggcccgcggccgtagtagcgc 298
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | |||||||||||| || |||||
Sbjct: 297 ttcccgggggcgcacggccattgtgcgct 269
Score = 135 bits (68), Expect = 4e-030
Identities = 190/228 (83%), Gaps = 2/228 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || || ||||||||||||||
Sbjct: 237 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgcagtcgcccacccgccg 178
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| || ||||| || |||| |||||||||||| |||| |||
Sbjct: 177 gtggtctcgtgggaggtctgtgctaggaaggcggccacctcgcgcttctgggcgtc-ggc 119
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || |||||||||||||||||||| ||| || || |||| |||| | |||||||
Sbjct: 118 gctgccggtggtgccgaagcccgggaaggcggctgcggcggcgacgaaggcgtcgtaggt 59
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcat 849
||||||||| ||||| |||| || ||||||||||||| || |||||
Sbjct: 58 gtagaagcccttggcctggcaggcgccgtcgttgcggtggagaagcat 11
>gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_N15 5', mRNA sequence
Length = 688
Score = 145 bits (73), Expect = 4e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||| |||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 410 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 351
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 350 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 291
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||| ||||||||||||||||| |
Sbjct: 290 ccggcaggtccatagttgtagttgtgggagagctggatcggcccgcggccgtagtagcgc 231
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | |||||||||||| || |||||
Sbjct: 230 ttcccgggggcgcacggccattgtgcgct 202
Score = 117 bits (59), Expect = 8e-025
Identities = 127/147 (86%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || || ||||||||||||||
Sbjct: 170 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgcagtcgcccacccgccg 111
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| || ||||| || |||| |||||||||||| |||| |||
Sbjct: 110 gtggtctcgtgggaggtctgtgctaggaaggcggccacctcgcgcttctgggcgtc-ggc 52
Query: 743 gc-ccccgtggtgccgaagcccgggaa 768
|| || ||||||||||||||||||||
Sbjct: 51 gctgccggtggtgccgaagcccgggaa 25
Score = 63.9 bits (32), Expect = 1e-008
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 211 gtcacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggcc 270
||||||||| || ||||| || ||||| || ||||||||||||||||| || | ||
Sbjct: 576 gtcacagtagcgcttgtaaaacccgattcgatcggcgacgcggctgtcctgcccgcgacc 517
Query: 271 gcactcgaggccgccgttgatgatgttggtga 302
|||||||| ||||||||||||||||||||||
Sbjct: 516 gcactcgatcccgccgttgatgatgttggtga 485
>gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. vulgare cDNA clone HT04K16
5-PRIME, mRNA sequence
Length = 447
Score = 145 bits (73), Expect = 4e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||| |||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 275 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 216
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 215 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 156
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||| ||||||||||||||||| |
Sbjct: 155 ccggcaggtccatagttgtagttgtgggagagctggatcggcccgcggccgtagtagcgc 96
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | |||||||||||| || |||||
Sbjct: 95 ttcccgggggcgcacggccattgtgcgct 67
Score = 71.9 bits (36), Expect = 4e-011
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 211 gtcacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggcc 270
||||||||| || ||||| || ||||| || ||||||||||||||||| || || ||
Sbjct: 441 gtcacagtagcgcttgtaaaacccgattcgatcggcgacgcggctgtcctgcccgtgacc 382
Query: 271 gcactcgaggccgccgttgatgatgttggtga 302
|||||||| ||||||||||||||||||||||
Sbjct: 381 gcactcgatcccgccgttgatgatgttggtga 350
Score = 44.1 bits (22), Expect = 0.010
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggc 648
|||| |||||||||||||||||||||
Sbjct: 35 tcctgcttgaagcagtagccccaggc 10
>gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. vulgare cDNA clone HT10K16
5-PRIME, mRNA sequence
Length = 670
Score = 145 bits (73), Expect = 4e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||| |||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 643 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 584
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 583 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 524
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || ||||||||||||| ||| | |||||| ||||||||||||||||| |
Sbjct: 523 ccggcaggtccatagttgtagttgtgggagagctggatcggcccgcggccgtagtagcgc 464
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | |||||||||||| || |||||
Sbjct: 463 ttcccgggggcgcacggccattgtgcgct 435
Score = 135 bits (68), Expect = 4e-030
Identities = 190/228 (83%), Gaps = 2/228 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || || ||||||||||||||
Sbjct: 403 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgcagtcgcccacccgccg 344
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| || ||||| || |||| |||||||||||| |||| |||
Sbjct: 343 gtggtctcgtgggaggtctgtgctaggaaggcggccacctcgcgcttctgggcgtc-ggc 285
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || |||||||||||||||||||| ||| || || |||| |||| | |||||||
Sbjct: 284 gctgccggtggtgccgaagcccgggaaggcggctgcggcggcgacgaaggcgtcgtaggt 225
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcat 849
||||||||| ||||| |||| || ||||||||||||| || |||||
Sbjct: 224 gtagaagcccttggcctggcaggcgccgtcgttgcggtggagaagcat 177
>gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099N16f, mRNA sequence
Length = 730
Score = 141 bits (71), Expect = 6e-032
Identities = 263/327 (80%)
Strand = Plus / Minus
Query: 226 gtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcgaggccgcc 285
||||||||||||||||||||| || |||||||| || || |||||||||||| |||||
Sbjct: 480 gtagaagccgatccggtcggcaacacggctgtccgcccccctgccgcactcgagcccgcc 421
Query: 286 gttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtcagccgc 345
||||||||||||||||| |||||| ||||| |||| ||| | || || |||| || ||
Sbjct: 420 gttgatgatgttggtgatgacgccatagccgggcaccctctccgccgcgttgtctgcggc 361
Query: 346 ggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgt 405
| |||||||| || ||||| || ||| |||| | ||||||||| | |||||||||
Sbjct: 360 cgtcggcgtccattggcccgtgatcacggcgtgagaggacggcttgttggcctgcggcgt 301
Query: 406 catccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgg 465
|||||||||||| | || |||| ||| |||||||||| || |||||||||||||||||
Sbjct: 300 catccagaaccatagtgccgtcttgaaggacacggtggcatccgtggccaccaggtccgg 241
Query: 466 gttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtagga 525
|||| ||| | | | |||||||||| | ||||| || |||||||||||||| | ||
Sbjct: 240 gttgttgagcaggtccacgccgatggcgcgcccggcagggccgtagttgtagttccatga 181
Query: 526 tatctggatgggcccgcggccgtagta 552
| | |||||| ||||||||||||||
Sbjct: 180 gagcatgatggggccgcggccgtagta 154
Score = 61.9 bits (31), Expect = 4e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 633 agcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtctcgt 692
||||||||||||||| |||||| ||||| ||||| || ||||| ||||| || ||||| |
Sbjct: 79 agcagtagccccaggagtaggggccgtcaggcgcagtggcccaaccgccggtggtctcat 20
Query: 693 gggacgtctgc 703
|||| ||||||
Sbjct: 19 gggaggtctgc 9
>gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004I09f, mRNA sequence
Length = 933
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 431 aacgacacggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatg 490
||||||||||| ||||||||||||||||||||||||||| |||| | || | ||||||
Sbjct: 714 aacgacacggtcgggtcggtggccaccaggtccgggttgcgcaggaggtcgaccccgatg 655
Query: 491 gcctggccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtag 550
||| |||| || ||||||||||||||||||| ||| | |||||| ||||| |||||||||
Sbjct: 654 gcccggcccgcaggcccgtagttgtagttgtgggagagctggatcggcccacggccgtag 595
Query: 551 tacttcttccccgcggcgcacggccactgggcgct 585
|| ||||||| | ||||||||||||||| |||||
Sbjct: 594 tagctcttccctggggcgcacggccactgcgcgct 560
Score = 121 bits (61), Expect = 5e-026
Identities = 187/229 (81%)
Strand = Plus / Minus
Query: 621 gctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgc 680
|||||| |||||||||||||||||||||| | | ||||| || ||||||||||||||||
Sbjct: 530 gctcctgcttgaagcagtagccccaggcgaaagctccgtccggtgccgtcgcccacccgc 471
Query: 681 ccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgg 740
| || ||||||||||| ||||| |||||||| || |||| |||||||||| | |||||
Sbjct: 470 cggtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttccgggtgtcgg 411
Query: 741 gcgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtagg 800
| || ||||||||||||||| |||| ||| || || |||| |||| | ||||||
Sbjct: 410 tgccgccggtggtgccgaagccccggaaggcggatgcggcggcgacgaaggcgtcgtagg 351
Query: 801 tgtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcat 849
|||||||||| ||||| |||| || ||||||||||||| || |||||
Sbjct: 350 tgtagaagcccttggcctggcaggcgccgtcgttgcggtggagaagcat 302
Score = 97.6 bits (49), Expect = 8e-019
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| |||||||||||| || | | ||||||||| ||||| |
Sbjct: 208 gcactggctctggcatccgtcgccgcagtagtccgaggtggagccgcaccagccgaagcg 149
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 148 gctgcagcagaggcagttggggcaggtcgccccgccggcctgcgagccgcactgctcggc 89
Query: 1049 g 1049
|
Sbjct: 88 g 88
>gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095E05f, mRNA sequence
Length = 717
Score = 139 bits (70), Expect = 2e-031
Identities = 174/209 (83%)
Strand = Plus / Plus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |||| |
Sbjct: 379 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttaaacgcc 438
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
|| |||| ||| ||||||||||||||||||||||| || | || | ||||||||| ||
Sbjct: 439 acagtggcgtccgtggccaccaggtccgggttggccagcagatcgaccccgatggcccgg 498
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
||||| || || | |||||||||| ||| | || ||||||||||||||||||||| |
Sbjct: 499 ccggcaggtccattattgtagttgtgggagagcttgatgggcccgcggccgtagtagcgc 558
Query: 557 ttccccgcggcgcacggccactgggcgct 585
|| || | ||||||||||||||| |||||
Sbjct: 559 ttnccgggggcgcacggccactgtgcgct 587
Score = 58.0 bits (29), Expect = 7e-007
Identities = 75/89 (84%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||| ||| ||| ||||| | ||||||| ||| ||| ||
Sbjct: 619 tcctgcttgaagcagtagccccaagcgaaggccccgttccgtgccgtcggccatccg-cc 677
Query: 683 gtcgtctcgtgggacgtctgcgccaggaa 711
|| ||||||||||| ||||| ||||||||
Sbjct: 678 gtggtctcgtgggaggtctgggccaggaa 706
>gb|BG368854.1|BG368854 HVSMEi0020P07f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0020P07f, mRNA sequence
Length = 625
Score = 139 bits (70), Expect = 2e-031
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||||||||| |||| ||| | ||||||||| ||||| | || |||| |||||
Sbjct: 501 tggctcgacggctttggcgcctgggccgtcatccaaaaccacatcgcagtcttanacgac 442
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
||||| ||||| ||||||||||||||||||||| |||| | || | ||||||||| ||
Sbjct: 441 acggtcgggtccgtggccaccaggtccgggttgcgcaggaggtcgaccccgatggcccgg 382
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
|| || ||||||||||||||||||| ||| | |||||| ||||| ||||||||||| ||
Sbjct: 381 cccgcaggcccgtagttgtagttgtgggagagctggatcggcccacggccgtagtagctc 322
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 321 ttccctggggcgcacggccactgcgcgct 293
Score = 99.6 bits (50), Expect = 2e-019
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 621 gctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgc 680
|||||| |||||||||||||||||||||| | | ||||| || ||||||||||||||||
Sbjct: 263 gctcctgcttgaagcagtagccccaggcgaaagctccgtccggtgccgtcgcccacccgc 204
Query: 681 ccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttc 730
| || ||||||||||| || || |||||||| || |||| ||||||||||
Sbjct: 203 cggtggtctcgtgggaggtttgggccaggaaggcggccacctcgcgcttc 154
Score = 48.1 bits (24), Expect = 6e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 263 ccatggccgcactcgaggccgccgttgatgatgttggtga 302
||||| |||||||||| |||||||||| |||||||||||
Sbjct: 616 ccatgcccgcactcgatcccgccgttgacgatgttggtga 577
>gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0020P03f, mRNA sequence
Length = 623
Score = 137 bits (69), Expect = 9e-031
Identities = 170/204 (83%)
Strand = Plus / Minus
Query: 382 cgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgacacggt 441
||||||||| |||| || | ||||||||| ||||| | || |||| |||||||||||
Sbjct: 496 cgacggctttggcgcatgggccgtcatccaaaaccacatcgcagtcttaaacgacacggt 437
Query: 442 ggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctggccggc 501
||||| ||||||||||||||||||||| |||| | || | ||||||||| |||| ||
Sbjct: 436 cgggtccgtggccaccaggtccgggttgcgcaggaggtcgacnccgatggcccggcccgc 377
Query: 502 gggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttcttccc 561
||||||||||||||||||| ||| | |||||| ||||| ||||||||||| |||||||
Sbjct: 376 aggcccgtagttgtagttgtgggagagctggatcggcccacggccgtagtagctcttccc 317
Query: 562 cgcggcgcacggccactgggcgct 585
| ||||||||||||||| |||||
Sbjct: 316 tggggcgcacggccactgcgcgct 293
Score = 121 bits (61), Expect = 5e-026
Identities = 187/229 (81%)
Strand = Plus / Minus
Query: 621 gctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgc 680
|||||| |||||||||||||||||||||| | | ||||| || ||||||||||||||||
Sbjct: 263 gctcctgcttgaagcagtagccccaggcgaaagctccgtccggtgccgtcgcccacccgc 204
Query: 681 ccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgg 740
| || ||||||||||| ||||| |||||||| || |||| |||||||||| | |||||
Sbjct: 203 cggtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttccgggtgtcgg 144
Query: 741 gcgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtagg 800
| || ||||||||||||||| |||| ||| || || |||| |||| | ||||||
Sbjct: 143 tgccgccggtggtgccgaagccccggaaggcggatgcggcggcgacgaaggcgtcgtagg 84
Query: 801 tgtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcat 849
|||||||||| ||||| |||| || ||||||||||||| || |||||
Sbjct: 83 tgtagaagcccttggcctggcaggcgccgtcgttgcggtggagaagcat 35
Score = 40.1 bits (20), Expect = 0.16
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 263 ccatggccgcactcgaggccgccgttgatgatgttggtga 302
||||| ||||| |||| |||||||||| |||||||||||
Sbjct: 615 ccatgcccgcattcgatcccgccgttgacgatgttggtga 576
>gb|BG365157.2|BG365157 HVSMEi0001I15f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0001I15f, mRNA sequence
Length = 937
Score = 137 bits (69), Expect = 9e-031
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||||||||| |||| ||| | ||||||||| ||||| | || |||| ||||||
Sbjct: 305 tggctcgacggctttggcgcctgggccgtcatccaaaaccacatcgcagtcttaaacgac 246
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
||||| ||||| ||||||||||||||||||||| |||| | || | ||||||||| ||
Sbjct: 245 acggtcgggtccgtggccaccaggtccgggttgcgcaggaggtcgaccccgatggcccgg 186
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
|| || ||||||||||||||||||| ||| | |||||| ||||| |||| |||||| ||
Sbjct: 185 cccgcaggcccgtagttgtagttgtgggagagctggatcggcccacggcagtagtagctc 126
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 125 ttccctggggcgcacggccactgcgcgct 97
Score = 71.9 bits (36), Expect = 4e-011
Identities = 75/88 (85%)
Strand = Plus / Minus
Query: 215 cagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcac 274
||||| || ||||| || ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 467 cagtagcgcttgtaaaacccgatccggtcggcgactcggctgtcctgcccatgcccgcac 408
Query: 275 tcgaggccgccgttgatgatgttggtga 302
|||| |||||||||| |||||||||||
Sbjct: 407 tcgatcccgccgttgacgatgttggtga 380
Score = 65.9 bits (33), Expect = 3e-009
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 621 gctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgc 680
|||||| |||||||||||||||||||||| | | ||||| || ||||||||||||||||
Sbjct: 67 gctcctgcttgaagcagtagccccaggcgaaagctccgtccggtgccgtcgcccacccgc 8
Query: 681 c 681
|
Sbjct: 7 c 7
>gb|BQ465191.1|BQ465191 HU02O12r HU Hordeum vulgare subsp. vulgare cDNA clone HU02O12
5-PRIME, mRNA sequence
Length = 580
Score = 137 bits (69), Expect = 9e-031
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||||||||| |||| ||| | ||||||||| ||||| | || |||| ||||||
Sbjct: 229 tggctcgacggctttggcgcctgggccgtcatccaaaaccacatcgcagtcttaaacgac 170
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
||||| ||||| ||||||||||||||||||||| |||| | || | || |||||| ||
Sbjct: 169 acggtcgggtccgtggccaccaggtccgggttgcgcaggaggtcgacccctatggcccgg 110
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
|| || ||||||||||||||||||| ||| | |||||| ||||| ||||||||||| ||
Sbjct: 109 cccgcaggcccgtagttgtagttgtgggagagctggatcggcccacggccgtagtagctc 50
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 49 ttccctggggcgcacggccactgcgcgct 21
Score = 73.8 bits (37), Expect = 1e-011
Identities = 118/145 (81%)
Strand = Plus / Minus
Query: 158 aagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacag 217
|||||| | |||||| |||||| | ||||| |||||||| || || || | ||| |||
Sbjct: 448 aagggcctttggttgtagcagtcgaggttgttgccgtagccaacgccgaggatgtcgcag 389
Query: 218 tatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcg 277
|| || ||||| || ||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 388 tagcgcttgtaaaacccgatccggtcggcgactcggctgtcctgcccatgcccgcactcg 329
Query: 278 aggccgccgttgatgatgttggtga 302
| |||||||||| |||||||||||
Sbjct: 328 atcccgccgttgacgatgttggtga 304
>gb|BQ466147.1|BQ466147 HT01L11T HT Hordeum vulgare subsp. vulgare cDNA clone HT01L11
5-PRIME, mRNA sequence
Length = 673
Score = 137 bits (69), Expect = 9e-031
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||||||||| |||| ||| | ||||||||| ||||| | || |||| ||||||
Sbjct: 343 tggctcgacggctttggcgcctgggccgtcatccaaaaccacatcgcagtcttaaacgac 284
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
||||| ||||| ||||||||||||||||||||| |||| | || | || |||||| ||
Sbjct: 283 acggtcgggtccgtggccaccaggtccgggttgcgcaggaggtcgacccctatggcccgg 224
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
|| || ||||||||||||||||||| ||| | |||||| ||||| ||||||||||| ||
Sbjct: 223 cccgcaggcccgtagttgtagttgtgggagagctggatcggcccacggccgtagtagctc 164
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 163 ttccctggggcgcacggccactgcgcgct 135
Score = 93.7 bits (47), Expect = 1e-017
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 621 gctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgc 680
|||||| |||||||||||||||||||||| | | ||||| || ||||||||||||||||
Sbjct: 105 gctcctgcttgaagcagtagccccaggcgaaagctccgtccggtgccgtcgcccacccgc 46
Query: 681 ccgtcgtctcgtgggacgtctgcgccaggaa 711
| || ||||||||||| ||||| ||||||||
Sbjct: 45 cggtggtctcgtgggaggtctgggccaggaa 15
Score = 73.8 bits (37), Expect = 1e-011
Identities = 118/145 (81%)
Strand = Plus / Minus
Query: 158 aagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacag 217
|||||| | |||||| |||||| | ||||| |||||||| || || || | ||| |||
Sbjct: 562 aagggcctttggttgtagcagtcgaggttgttgccgtagccaacgccgaggatgtcgcag 503
Query: 218 tatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcg 277
|| || ||||| || ||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 502 tagcgcttgtaaaacccgatccggtcggcgactcggctgtcctgcccatgcccgcactcg 443
Query: 278 aggccgccgttgatgatgttggtga 302
| |||||||||| |||||||||||
Sbjct: 442 atcccgccgttgacgatgttggtga 418
>gb|CA012210.1|CA012210 HT04M11r HT Hordeum vulgare subsp. vulgare cDNA clone HT04M11
5-PRIME, mRNA sequence
Length = 568
Score = 137 bits (69), Expect = 9e-031
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||||||||| |||| ||| | ||||||||| ||||| | || |||| ||||||
Sbjct: 425 tggctcgacggctttggcgcctgggccgtcatccaaaaccacatcgcagtcttaaacgac 366
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
||||| ||||| ||||||||||||||||||||| |||| | || | || |||||| ||
Sbjct: 365 acggtcgggtccgtggccaccaggtccgggttgcgcaggaggtcgacccctatggcccgg 306
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
|| || ||||||||||||||||||| ||| | |||||| ||||| ||||||||||| ||
Sbjct: 305 cccgcaggcccgtagttgtagttgtgggagagctggatcggcccacggccgtagtagctc 246
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 245 ttccctggggcgcacggccactgcgcgct 217
Score = 107 bits (54), Expect = 8e-022
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 621 gctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgc 680
|||||| |||||||||||||||||||||| | | ||||| || ||||||||||||||||
Sbjct: 187 gctcctgcttgaagcagtagccccaggcgaaagctccgtccggtgccgtcgcccacccgc 128
Query: 681 ccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttc 730
| || ||||||||||| ||||| |||||||| || |||| ||||||||||
Sbjct: 127 cggtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttc 78
Score = 65.9 bits (33), Expect = 3e-009
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 234 cgatccggtcggcgacgcggctgtcagcgccatggccgcactcgaggccgccgttgatga 293
|||||||||||||||| |||||||| ||||| |||||||||| |||||||||| ||
Sbjct: 568 cgatccggtcggcgactcggctgtcctgcccatgcccgcactcgatcccgccgttgacga 509
Query: 294 tgttggtga 302
|||||||||
Sbjct: 508 tgttggtga 500
>gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. vulgare cDNA clone HT07J12
5-PRIME, mRNA sequence
Length = 639
Score = 137 bits (69), Expect = 9e-031
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||||||||| |||| ||| | ||||||||| ||||| | || |||| ||||||
Sbjct: 385 tggctcgacggctttggcgcctgggccgtcatccaaaaccacatcgcagtcttaaacgac 326
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
||||| ||||| ||||||||||||||||||||| |||| | || | || |||||| ||
Sbjct: 325 acggtcgggtccgtggccaccaggtccgggttgcgcaggaggtcgacccctatggcccgg 266
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
|| || ||||||||||||||||||| ||| | |||||| ||||| ||||||||||| ||
Sbjct: 265 cccgcaggcccgtagttgtagttgtgggagagctggatcggcccacggccgtagtagctc 206
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 205 ttccctggggcgcacggccactgcgcgct 177
Score = 107 bits (54), Expect = 8e-022
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 621 gctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgc 680
|||||| |||||||||||||||||||||| | | ||||| || ||||||||||||||||
Sbjct: 147 gctcctgcttgaagcagtagccccaggcgaaagctccgtccggtgccgtcgcccacccgc 88
Query: 681 ccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttc 730
| || ||||||||||| ||||| |||||||| || |||| ||||||||||
Sbjct: 87 cggtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttc 38
Score = 73.8 bits (37), Expect = 1e-011
Identities = 118/145 (81%)
Strand = Plus / Minus
Query: 158 aagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacag 217
|||||| | |||||| |||||| | ||||| |||||||| || || || | ||| |||
Sbjct: 604 aagggcctttggttgtagcagtcgaggttgttgccgtagccaacgccgaggatgtcgcag 545
Query: 218 tatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcg 277
|| || ||||| || ||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 544 tagcgcttgtaaaacccgatccggtcggcgactcggctgtcctgcccatgcccgcactcg 485
Query: 278 aggccgccgttgatgatgttggtga 302
| |||||||||| |||||||||||
Sbjct: 484 atcccgccgttgacgatgttggtga 460
>gb|CA013604.1|CA013604 HT08P16r HT Hordeum vulgare subsp. vulgare cDNA clone HT08P16
5-PRIME, mRNA sequence
Length = 633
Score = 137 bits (69), Expect = 9e-031
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| ||||||||| |||| ||| | ||||||||| ||||| | || |||| ||||||
Sbjct: 281 tggctcgacggctttggcgcctgggccgtcatccaaaaccacatcgcagtcttaaacgac 222
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
||||| ||||| ||||||||||||||||||||| |||| | || | || |||||| ||
Sbjct: 221 acggtcgggtccgtggccaccaggtccgggttgcgcaggaggtcgacccctatggcccgg 162
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
|| || ||||||||||||||||||| ||| | |||||| ||||| ||||||||||| ||
Sbjct: 161 cccgcaggcccgtagttgtagttgtgggagagctggatcggcccacggccgtagtagctc 102
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 101 ttccctggggcgcacggccactgcgcgct 73
Score = 73.8 bits (37), Expect = 1e-011
Identities = 118/145 (81%)
Strand = Plus / Minus
Query: 158 aagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacag 217
|||||| | |||||| |||||| | ||||| |||||||| || || || | ||| |||
Sbjct: 500 aagggcctttggttgtagcagtcgaggttgttgccgtagccaacgccgaggatgtcgcag 441
Query: 218 tatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcg 277
|| || ||||| || ||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 440 tagcgcttgtaaaacccgatccggtcggcgactcggctgtcctgcccatgcccgcactcg 381
Query: 278 aggccgccgttgatgatgttggtga 302
| |||||||||| |||||||||||
Sbjct: 380 atcccgccgttgacgatgttggtga 356
>gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitinase gene, complete cds
Length = 1684
Score = 137 bits (69), Expect = 9e-031
Identities = 189/229 (82%)
Strand = Plus / Minus
Query: 621 gctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgc 680
|||||| |||||||||||||||||||||| | | ||||| || ||||||||||||||||
Sbjct: 1092 gctcctgcttgaagcagtagccccaggcgaaagctccgtccggtgccgtcgcccacccgc 1033
Query: 681 ccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgg 740
| || ||||||||||| ||||| |||||||| || |||| |||||||||| | |||||
Sbjct: 1032 cggtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttccgggtgtcgg 973
Query: 741 gcgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtagg 800
| || ||||||||||||||| |||| ||| || || |||| |||| | ||||||
Sbjct: 972 tgccgccggtggtgccgaagccccggaaggcggatgcggcggcgacgaaggcgtcgtagg 913
Query: 801 tgtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcat 849
|||||||||| ||||| |||| || ||||||||||||||||||||||
Sbjct: 912 tgtagaagcccttggcctggcaggcgccgtcgttgcggtgcagcagcat 864
Score = 105 bits (53), Expect = 3e-021
Identities = 170/209 (81%)
Strand = Plus / Minus
Query: 377 tggcacgacggcttgggcgactgcggcgtcatccagaaccagacggcggtctcgaacgac 436
|||| |||||| || |||| ||| | ||||||||| ||||| | || |||| ||||||
Sbjct: 1330 tggctcgacggttttggcgcctgggccgtcatccaaaaccacatcgcagtcttaaacgac 1271
Query: 437 acggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatggcctgg 496
||||| ||||| ||||||||||||||||||||| || | || | || || ||| ||
Sbjct: 1270 acggtcgggtccgtggccaccaggtccgggttgcgcagcagatcgacccctatagcccgg 1211
Query: 497 ccggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgtagtacttc 556
|| || ||||||||||||||||||| ||| | |||||| ||||| ||||||||||| ||
Sbjct: 1210 cccgcaggcccgtagttgtagttgtgggagagctggatcggcccacggccgtagtagctc 1151
Query: 557 ttccccgcggcgcacggccactgggcgct 585
||||| | ||||||||||||||| |||||
Sbjct: 1150 ttccctggggcgcacggccactgcgcgct 1122
Score = 85.7 bits (43), Expect = 3e-015
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 971 gccgcaccacccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctg 1030
||||||||| ||||| |||||||||| |||||||||||||| ||| |||||||||||
Sbjct: 731 gccgcaccaaccgaagcggctgcagcagaggcagttggggcaggtcgccccgccggcctg 672
Query: 1031 cgacccgcactgctcggcg 1049
||| |||||||||||||||
Sbjct: 671 cgagccgcactgctcggcg 653
Score = 60.0 bits (30), Expect = 2e-007
Identities = 117/146 (80%)
Strand = Plus / Minus
Query: 157 gaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcaca 216
||||||| ||||| || |||||| | ||||| |||||||| || || || | ||| ||
Sbjct: 1550 gaagggcctctggctgtagcagtcgaggttgttgccgtagccaacgccgaggatgtcgca 1491
Query: 217 gtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactc 276
||| || ||||| || |||||||| |||||||| || ||||| ||||| ||||||||
Sbjct: 1490 gtagcgcttgtaaaacccgatccgatcggcgactcgactgtcctgcccatgcccgcactc 1431
Query: 277 gaggccgccgttgatgatgttggtga 302
|| |||||||||| |||||||||||
Sbjct: 1430 gatcccgccgttgacgatgttggtga 1405
>gb|BE195290.2|BE195290 HVSMEh0088N04f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088N04f, mRNA sequence
Length = 628
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 391 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 332
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 331 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 273
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 272 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 213
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 212 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 169
Score = 81.8 bits (41), Expect = 5e-014
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 431 aacgacacggtggggtcggtggccaccaggtccgggttggcgaggatgccggcgccgatg 490
|||| ||| |||| ||| ||||||||||||||||||||||| || | || | ||||||
Sbjct: 577 aacgccacagtggcgtcngtggccaccaggtccgggttggccagcagatcgac-ccgatg 519
Query: 491 gcctggcc-ggcgggcccgtagttgtagttgtaggatatctggatgggcccgcggccgta 549
| | |||| ||| || || ||||||||||||| ||| | ||||||||||||||| |||||
Sbjct: 518 ggccggcccggcaggtccatagttgtagttgtgggagagctggatgggcccgcgcccgta 459
Query: 550 gtacttcttccccgcggcgcacggccactgggcgct 585
||| |||||| | ||||||||||||||| |||||
Sbjct: 458 gtagcgcttcccgggggcgcacggccactgtgcgct 423
>gb|BG366443.1|BG366443 HVSMEi0007B04f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0007B04f, mRNA sequence
Length = 495
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 384 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 325
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 324 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 266
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 265 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 206
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 205 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 162
Score = 81.8 bits (41), Expect = 5e-014
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 509 tagttgtagttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcg 568
||||||||||||| ||| | |||||||||||||||||||||||| |||||| | ||||
Sbjct: 492 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 433
Query: 569 cacggccactgggcgct 585
||||||||||| |||||
Sbjct: 432 cacggccactgtgcgct 416
>gb|BG366444.1|BG366444 HVSMEi0007B06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0007B06f, mRNA sequence
Length = 494
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 375 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 316
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 315 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 257
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 256 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 197
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 196 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 153
Score = 81.8 bits (41), Expect = 5e-014
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 509 tagttgtagttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcg 568
||||||||||||| ||| | |||||||||||||||||||||||| |||||| | ||||
Sbjct: 483 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 424
Query: 569 cacggccactgggcgct 585
||||||||||| |||||
Sbjct: 423 cacggccactgtgcgct 407
>gb|BG366514.1|BG366514 HVSMEi0007F02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0007F02f, mRNA sequence
Length = 494
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 387 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 328
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 327 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 269
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 268 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 209
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 208 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 165
Score = 73.8 bits (37), Expect = 1e-011
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 510 agttgtagttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgc 569
|||||||||||| ||| | |||||||||||||||||||||||| |||||| |||||
Sbjct: 494 agttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgngggcgc 435
Query: 570 acggccactgggcgct 585
|||||||||| |||||
Sbjct: 434 acggccactgtgcgct 419
>gb|BG368439.1|BG368439 HVSMEi0018M10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0018M10f, mRNA sequence
Length = 558
Score = 135 bits (68), Expect = 4e-030
Identities = 187/224 (83%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 623 tcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgccc 682
|||| |||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct: 393 tcctgcttgaagcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccg 334
Query: 683 gtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcgggc 742
|| ||||||||||| ||||| |||||||| || |||| |||||||||||| |||| |||
Sbjct: 333 gtggtctcgtgggaggtctgggccaggaaggcggccacctcgcgcttctgggcgtc-ggc 275
Query: 743 gc-ccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
|| || ||| |||||||||||||||| || || || |||| |||| | |||||||
Sbjct: 274 gctgccggtgctgccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggt 215
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagca 845
||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 214 gtagaagcccttggcctggcaggcgccgtcgttgcggtgcagca 171
Score = 93.7 bits (47), Expect = 1e-017
Identities = 111/133 (83%)
Strand = Plus / Minus
Query: 453 ccaccaggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagt 512
||||||||||||||||||| || | || | ||||||||| | ||||| || || ||||
Sbjct: 557 ccaccaggtccgggttggccagcagatcgaccccgatggcccgnccggcaggtccatagt 498
Query: 513 tgtagttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacg 572
||||||||| ||| | |||||||||||||||||||||||| |||||| ||||||||
Sbjct: 497 tgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgngggcgcacg 438
Query: 573 gccactgggcgct 585
||||||| |||||
Sbjct: 437 gccactgtgcgct 425
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 196,847
Number of Sequences: 312970
Number of extensions: 196847
Number of successful extensions: 62973
Number of sequences better than 0.5: 315
Number of HSP's better than 0.5 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61630
Number of HSP's gapped (non-prelim): 1133
length of query: 1141
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1122
effective length of database: 169,188,109
effective search space: 189829058298
effective search space used: 189829058298
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)