BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713091.2.1
(1013 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedl... 139 2e-031
gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DA... 139 2e-031
gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, n... 131 5e-029
gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. v... 131 5e-029
gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedl... 127 8e-028
gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA li... 127 8e-028
gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hy... 127 8e-028
gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. v... 127 8e-028
gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA li... 127 8e-028
gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA li... 127 8e-028
gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA li... 125 3e-027
gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. v... 125 3e-027
gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. v... 125 3e-027
gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. v... 125 3e-027
gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedl... 123 1e-026
gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedl... 123 1e-026
gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedl... 121 5e-026
gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots... 119 2e-025
gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots... 119 2e-025
gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedl... 119 2e-025
gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedl... 119 2e-025
gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare s... 117 7e-025
gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. v... 117 7e-025
gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. v... 117 7e-025
gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedl... 111 5e-023
gb|BG299996.1|BG299996 HVSMEa0022O20f Hordeum vulgare seedl... 107 7e-022
gb|BF256380.2|BF256380 HVSMEf0009H03f Hordeum vulgare seedl... 103 1e-020
gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedl... 100 2e-019
gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedl... 100 2e-019
gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedl... 100 2e-019
gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 ... 100 2e-019
gb|CA003018.1|CA003018 HS09C19r HS Hordeum vulgare subsp. v... 100 2e-019
gb|CA027668.1|CA027668 HZ59K12r HZ Hordeum vulgare subsp. v... 98 7e-019
gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedl... 96 3e-018
gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedl... 94 1e-017
gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedl... 94 1e-017
gb|CA004877.1|CA004877 HS18P04r HS Hordeum vulgare subsp. v... 94 1e-017
gb|BF623830.2|BF623830 HVSMEa0007D03f Hordeum vulgare seedl... 92 4e-017
gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Libr... 88 7e-016
gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Libr... 88 7e-016
gb|BF626678.2|BF626678 HVSMEb0001A21f Hordeum vulgare seedl... 88 7e-016
gb|BE602348.2|BE602348 HVSMEh0098J09f Hordeum vulgare 5-45 ... 88 7e-016
gb|BG368482.1|BG368482 HVSMEi0019D10f Hordeum vulgare 20 DA... 88 7e-016
gb|BI947132.1|BI947132 HVSMEl0003N16f Hordeum vulgare spike... 88 7e-016
gb|BI948019.1|BI948019 HVSMEl0007N21f Hordeum vulgare spike... 88 7e-016
gb|BI949114.1|BI949114 HVSMEl0012G22f Hordeum vulgare spike... 88 7e-016
gb|BI949614.1|BI949614 HVSMEl0014O15f Hordeum vulgare spike... 88 7e-016
gb|BI953138.1|BI953138 HVSMEm0011D12f Hordeum vulgare green... 88 7e-016
gb|BI953646.1|BI953646 HVSMEm0013K24f Hordeum vulgare green... 88 7e-016
gb|BE216017.1|BE216017 HV_CEb0009C05f Hordeum vulgare seedl... 88 7e-016
gb|BF255920.2|BF255920 HVSMEf0008D10f Hordeum vulgare seedl... 88 7e-016
gb|BG342989.2|BG342989 HVSMEg0001J14f Hordeum vulgare pre-a... 88 7e-016
gb|BE602564.3|BE602564 HVSMEh0100A01f Hordeum vulgare 5-45 ... 88 7e-016
gb|AV923424.1|AV923424 AV923424 K. Sato unpublished cDNA li... 88 7e-016
gb|AV923513.1|AV923513 AV923513 K. Sato unpublished cDNA li... 88 7e-016
gb|AV923925.1|AV923925 AV923925 K. Sato unpublished cDNA li... 88 7e-016
gb|AV924773.1|AV924773 AV924773 K. Sato unpublished cDNA li... 88 7e-016
gb|AV925064.1|AV925064 AV925064 K. Sato unpublished cDNA li... 88 7e-016
gb|AV926037.1|AV926037 AV926037 K. Sato unpublished cDNA li... 88 7e-016
gb|AV926646.1|AV926646 AV926646 K. Sato unpublished cDNA li... 88 7e-016
gb|AV926802.1|AV926802 AV926802 K. Sato unpublished cDNA li... 88 7e-016
gb|AV926829.1|AV926829 AV926829 K. Sato unpublished cDNA li... 88 7e-016
gb|AV932402.1|AV932402 AV932402 K. Sato unpublished cDNA li... 88 7e-016
gb|AV933046.1|AV933046 AV933046 K. Sato unpublished cDNA li... 88 7e-016
gb|AV933203.1|AV933203 AV933203 K. Sato unpublished cDNA li... 88 7e-016
gb|AV933552.1|AV933552 AV933552 K. Sato unpublished cDNA li... 88 7e-016
gb|AV933636.1|AV933636 AV933636 K. Sato unpublished cDNA li... 88 7e-016
gb|AV934138.1|AV934138 AV934138 K. Sato unpublished cDNA li... 88 7e-016
gb|AV934268.1|AV934268 AV934268 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ469586.1|BJ469586 BJ469586 K. Sato unpublished cDNA li... 88 7e-016
gb|BI778185.2|BI778185 EBro07_SQ002_H11_R root, 3 week, red... 88 7e-016
gb|BJ546858.1|BJ546858 BJ546858 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ546861.1|BJ546861 BJ546861 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ546871.1|BJ546871 BJ546871 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ546903.1|BJ546903 BJ546903 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ546927.1|BJ546927 BJ546927 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ546949.1|BJ546949 BJ546949 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ546968.1|BJ546968 BJ546968 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547042.1|BJ547042 BJ547042 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547072.1|BJ547072 BJ547072 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547144.1|BJ547144 BJ547144 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547269.1|BJ547269 BJ547269 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547290.1|BJ547290 BJ547290 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547398.1|BJ547398 BJ547398 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547507.1|BJ547507 BJ547507 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547528.1|BJ547528 BJ547528 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547544.1|BJ547544 BJ547544 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547611.1|BJ547611 BJ547611 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547635.1|BJ547635 BJ547635 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547661.1|BJ547661 BJ547661 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547685.1|BJ547685 BJ547685 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547741.1|BJ547741 BJ547741 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547767.1|BJ547767 BJ547767 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547768.1|BJ547768 BJ547768 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547778.1|BJ547778 BJ547778 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547797.1|BJ547797 BJ547797 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547849.1|BJ547849 BJ547849 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ547881.1|BJ547881 BJ547881 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ548150.1|BJ548150 BJ548150 K. Sato unpublished cDNA li... 88 7e-016
gb|BJ548902.1|BJ548902 BJ548902 K. Sato unpublished cDNA li... 88 7e-016
gb|BQ469646.1|BQ469646 HZ01H04r HZ Hordeum vulgare subsp. v... 86 3e-015
gb|BI948082.1|BI948082 HVSMEl0008C04f Hordeum vulgare spike... 82 4e-014
gb|BI949279.1|BI949279 HVSMEl0013C05f Hordeum vulgare spike... 82 4e-014
gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, n... 82 4e-014
gb|BJ547109.1|BJ547109 BJ547109 K. Sato unpublished cDNA li... 82 4e-014
gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots... 80 2e-013
gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedl... 80 2e-013
gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedl... 80 2e-013
gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedl... 80 2e-013
gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedl... 80 2e-013
gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedl... 80 2e-013
gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedl... 80 2e-013
gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedl... 80 2e-013
gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedl... 80 2e-013
gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedl... 80 2e-013
gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedl... 80 2e-013
gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. v... 80 2e-013
gb|BJ548512.1|BJ548512 BJ548512 K. Sato unpublished cDNA li... 80 2e-013
gb|BF623386.2|BF623386 HVSMEa0016I09f Hordeum vulgare seedl... 78 6e-013
gb|BF257698.2|BF257698 HVSMEf0013K02f Hordeum vulgare seedl... 78 6e-013
gb|BI950533.1|BI950533 HVSMEl0021D14f Hordeum vulgare spike... 78 6e-013
gb|BQ465287.1|BQ465287 HU03D01r HU Hordeum vulgare subsp. v... 78 6e-013
gb|CA004703.1|CA004703 HS18G22r HS Hordeum vulgare subsp. v... 78 6e-013
gb|CA007742.1|CA007742 HU08O02r HU Hordeum vulgare subsp. v... 78 6e-013
gb|CA012539.1|CA012539 HT05L11r HT Hordeum vulgare subsp. v... 78 6e-013
gb|CA017465.1|CA017465 HV05E15r HV Hordeum vulgare subsp. v... 78 6e-013
gb|CA017476.1|CA017476 HV05F04r HV Hordeum vulgare subsp. v... 78 6e-013
gb|CA019652.1|CA019652 HV12K19r HV Hordeum vulgare subsp. v... 78 6e-013
gb|BF256426.3|BF256426 HVSMEf0009J14f Hordeum vulgare seedl... 76 3e-012
gb|CA017560.1|CA017560 HV05I24r HV Hordeum vulgare subsp. v... 76 3e-012
gb|BF624504.3|BF624504 HVSMEa0016N24f Hordeum vulgare seedl... 74 1e-011
gb|BG299804.2|BG299804 HVSMEa0021O04f Hordeum vulgare seedl... 74 1e-011
gb|AV918927.1|AV918927 AV918927 K. Sato unpublished cDNA li... 74 1e-011
gb|BM442945.2|BM442945 EBro02_SQ001_P16_R root, 3 week, hyd... 74 1e-011
gb|CA012122.1|CA012122 HT04I07r HT Hordeum vulgare subsp. v... 74 1e-011
gb|BF623248.2|BF623248 HVSMEa0016A09f Hordeum vulgare seedl... 72 4e-011
gb|BF622945.3|BF622945 HVSMEa0012E03f Hordeum vulgare seedl... 72 4e-011
gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedl... 72 4e-011
gb|BI948427.1|BI948427 HVSMEl0009I08f Hordeum vulgare spike... 72 4e-011
gb|BI950563.1|BI950563 HVSMEl0021F15f Hordeum vulgare spike... 72 4e-011
gb|BQ765875.1|BQ765875 EBro03_SQ008_M07_R root, 3 week, wat... 72 4e-011
gb|CA012898.1|CA012898 HT06M15r HT Hordeum vulgare subsp. v... 72 4e-011
gb|BJ548248.1|BJ548248 BJ548248 K. Sato unpublished cDNA li... 72 4e-011
gb|AV924070.1|AV924070 AV924070 K. Sato unpublished cDNA li... 70 2e-010
gb|BM816911.1|BM816911 HB106C10_SK.ab1 HB Hordeum vulgare s... 70 2e-010
gb|BJ548403.1|BJ548403 BJ548403 K. Sato unpublished cDNA li... 70 2e-010
gb|BJ548926.1|BJ548926 BJ548926 K. Sato unpublished cDNA li... 70 2e-010
gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots... 68 6e-010
gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots... 68 6e-010
gb|BF622486.2|BF622486 HVSMEa0004I15f Hordeum vulgare seedl... 68 6e-010
gb|BF625356.2|BF625356 HVSMEa0008J19f Hordeum vulgare seedl... 68 6e-010
gb|BI947723.1|BI947723 HVSMEl0006J20f Hordeum vulgare spike... 68 6e-010
gb|BI949438.1|BI949438 HVSMEl0013O11f Hordeum vulgare spike... 68 6e-010
gb|BI952820.1|BI952820 HVSMEm0007N21f Hordeum vulgare green... 68 6e-010
gb|BI955294.1|BI955294 HVSMEm0022F18f Hordeum vulgare green... 68 6e-010
gb|BQ471258.1|BQ471258 HV01N17T HV Hordeum vulgare subsp. v... 68 6e-010
gb|BJ545696.1|BJ545696 BJ545696 K. Sato unpublished cDNA li... 68 6e-010
gb|BJ546043.1|BJ546043 BJ546043 K. Sato unpublished cDNA li... 68 6e-010
gb|BF259240.3|BF259240 HVSMEf0018G18f Hordeum vulgare seedl... 66 2e-009
gb|BJ548749.1|BJ548749 BJ548749 K. Sato unpublished cDNA li... 66 2e-009
gb|AV833639.1|AV833639 AV833639 K. Sato unpublished cDNA li... 64 1e-008
gb|BF622044.2|BF622044 HVSMEa0001J20f Hordeum vulgare seedl... 64 1e-008
gb|BI952081.1|BI952081 HVSMEm0004I21f Hordeum vulgare green... 64 1e-008
gb|BF625851.2|BF625851 HVSMEa0013N14f Hordeum vulgare seedl... 62 4e-008
gb|BF267193.3|BF267193 HV_CEa0017D12f Hordeum vulgare seedl... 62 4e-008
gb|BF626269.2|BF626269 HVSMEa0018D07f Hordeum vulgare seedl... 60 1e-007
gb|BI946599.1|BI946599 HVSMEl0001A18f Hordeum vulgare spike... 60 1e-007
gb|AL450842.1|AL450842 AL450842 Hordeum vulgare Barke etiol... 58 6e-007
gb|BE214864.3|BE214864 HV_CEb0004O15f Hordeum vulgare seedl... 58 6e-007
gb|CA006848.1|CA006848 HU05N24r HU Hordeum vulgare subsp. v... 58 6e-007
gb|BJ548710.1|BJ548710 BJ548710 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ549023.1|BJ549023 BJ549023 K. Sato unpublished cDNA li... 58 6e-007
gb|BI951922.1|BI951922 HVSMEm0003M11f Hordeum vulgare green... 56 2e-006
gb|BF261927.2|BF261927 HV_CEa0002J15f Hordeum vulgare seedl... 56 2e-006
gb|BF267688.2|BF267688 HV_CEa0018J20f Hordeum vulgare seedl... 56 2e-006
gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedl... 56 2e-006
gb|AV936388.1|AV936388 AV936388 K. Sato unpublished cDNA li... 56 2e-006
gb|BI950751.1|BI950751 HVSMEl0023B08f Hordeum vulgare spike... 54 9e-006
gb|CV058333.1|CV058333 BNEL36h8 Barley EST endosperm librar... 54 9e-006
gb|CV060337.1|CV060337 BNEL57a4 Barley EST endosperm librar... 54 9e-006
gb|BF623987.2|BF623987 HVSMEa0008F14f Hordeum vulgare seedl... 52 4e-005
gb|BI954235.1|BI954235 HVSMEm0016M03f Hordeum vulgare green... 52 4e-005
gb|BQ664112.1|BQ664112 HV01N17w HV Hordeum vulgare subsp. v... 52 4e-005
gb|CA025935.1|CA025935 HZ53J07r HZ Hordeum vulgare subsp. v... 52 4e-005
gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedl... 48 6e-004
gb|CA018052.1|CA018052 HV07E12r HV Hordeum vulgare subsp. v... 48 6e-004
gb|BE411006.1|BE411006 ISC001.D03F990519 ITEC ISC Barley Le... 46 0.002
gb|AV834582.1|AV834582 AV834582 K. Sato unpublished cDNA li... 46 0.002
gb|BF622296.2|BF622296 HVSMEa0002K01f Hordeum vulgare seedl... 46 0.002
gb|BF622298.2|BF622298 HVSMEa0002K03f Hordeum vulgare seedl... 46 0.002
gb|BE215757.1|BE215757 HV_CEb0008G14f Hordeum vulgare seedl... 46 0.002
gb|BE216520.1|BE216520 HV_CEb0010L11f Hordeum vulgare seedl... 46 0.002
gb|BF065604.1|BF065604 HV_CEb0012O15f Hordeum vulgare seedl... 46 0.002
gb|BF065899.1|BF065899 HV_CEb0014E21f Hordeum vulgare seedl... 46 0.002
gb|BF065922.1|BF065922 HV_CEb0014F21f Hordeum vulgare seedl... 46 0.002
gb|BF065944.1|BF065944 HV_CEb0014G19f Hordeum vulgare seedl... 46 0.002
gb|BF065968.1|BF065968 HV_CEb0014H19f Hordeum vulgare seedl... 46 0.002
gb|BF266117.2|BF266117 HV_CEa0014D16f Hordeum vulgare seedl... 46 0.002
gb|BF267384.2|BF267384 HV_CEa0017M06f Hordeum vulgare seedl... 46 0.002
gb|BE559055.2|BE559055 HV_CEb0022I16f Hordeum vulgare seedl... 46 0.002
gb|BF259824.3|BF259824 HVSMEf0020F20f Hordeum vulgare seedl... 46 0.002
gb|AV922724.1|AV922724 AV922724 K. Sato unpublished cDNA li... 46 0.002
gb|BF622292.2|BF622292 HVSMEa0002I21f Hordeum vulgare seedl... 44 0.009
gb|BG299590.1|BG299590 HVSMEa0020O20f Hordeum vulgare seedl... 44 0.009
gb|BF623515.3|BF623515 HVSMEa0002H21f Hordeum vulgare seedl... 44 0.009
gb|BF624808.3|BF624808 HVSMEa0017M20f Hordeum vulgare seedl... 44 0.009
gb|BF626393.3|BF626393 HVSMEa0018A21f Hordeum vulgare seedl... 44 0.009
gb|BF257083.2|BF257083 HVSMEf0011M23f Hordeum vulgare seedl... 44 0.009
gb|BF065573.1|BF065573 HV_CEb0012M23f Hordeum vulgare seedl... 44 0.009
gb|CV058068.1|CV058068 BNEL34a12 Barley EST endosperm libra... 44 0.009
gb|BF263502.3|BF263502 HV_CEa0006O15f Hordeum vulgare seedl... 42 0.035
gb|AV928806.1|AV928806 AV928806 K. Sato unpublished cDNA li... 42 0.035
gb|DQ175936.1| Hordeum vulgare subsp. vulgare clone 33-32A-... 42 0.035
gb|AL500273.1|AL500273 AL500273 Hordeum vulgare Barke etiol... 40 0.14
gb|BF623684.2|BF623684 HVSMEa0003M02f Hordeum vulgare seedl... 40 0.14
gb|BF625649.2|BF625649 HVSMEa0013B21f Hordeum vulgare seedl... 40 0.14
gb|BF619549.2|BF619549 HVSMEc0004A15f Hordeum vulgare seedl... 40 0.14
gb|BF619363.2|BF619363 HVSMEc0016M05f Hordeum vulgare seedl... 40 0.14
gb|BF620788.2|BF620788 HVSMEc0020N16f Hordeum vulgare seedl... 40 0.14
gb|BF253797.2|BF253797 HVSMEf0002C11f Hordeum vulgare seedl... 40 0.14
gb|BF253803.2|BF253803 HVSMEf0002C17f Hordeum vulgare seedl... 40 0.14
gb|BF254945.2|BF254945 HVSMEf0005H21f Hordeum vulgare seedl... 40 0.14
gb|BF258539.2|BF258539 HVSMEf0016A04f Hordeum vulgare seedl... 40 0.14
gb|BI948705.1|BI948705 HVSMEl0010J03f Hordeum vulgare spike... 40 0.14
gb|BI949974.1|BI949974 HVSMEl0017G12f Hordeum vulgare spike... 40 0.14
gb|BG415059.1|BG415059 HVSMEk0004P20f Hordeum vulgare testa... 40 0.14
gb|BI958976.1|BI958976 HVSMEn0017I10f Hordeum vulgare rachi... 40 0.14
gb|BI959586.1|BI959586 HVSMEn0020E21f Hordeum vulgare rachi... 40 0.14
gb|BE196145.3|BE196145 HVSMEh0091H19f Hordeum vulgare 5-45 ... 40 0.14
gb|BE196654.3|BE196654 HVSMEh0092O09f Hordeum vulgare 5-45 ... 40 0.14
gb|AV910856.1|AV910856 AV910856 K. Sato unpublished cDNA li... 40 0.14
gb|AV927871.1|AV927871 AV927871 K. Sato unpublished cDNA li... 40 0.14
gb|AV929870.1|AV929870 AV929870 K. Sato unpublished cDNA li... 40 0.14
gb|AV931694.1|AV931694 AV931694 K. Sato unpublished cDNA li... 40 0.14
gb|AV932609.1|AV932609 AV932609 K. Sato unpublished cDNA li... 40 0.14
gb|AV935988.1|AV935988 AV935988 K. Sato unpublished cDNA li... 40 0.14
gb|AV936609.1|AV936609 AV936609 K. Sato unpublished cDNA li... 40 0.14
gb|AV937000.1|AV937000 AV937000 K. Sato unpublished cDNA li... 40 0.14
gb|BJ471554.1|BJ471554 BJ471554 K. Sato unpublished cDNA li... 40 0.14
gb|BQ460114.1|BQ460114 HA07C20r HA Hordeum vulgare subsp. v... 40 0.14
gb|BQ464763.1|BQ464763 HU01G03T HU Hordeum vulgare subsp. v... 40 0.14
gb|BQ466342.1|BQ466342 HT02E05r HT Hordeum vulgare subsp. v... 40 0.14
gb|BQ466475.1|BQ466475 HT02K07r HT Hordeum vulgare subsp. v... 40 0.14
gb|BQ466550.1|BQ466550 HT02N19r HT Hordeum vulgare subsp. v... 40 0.14
gb|BQ467510.1|BQ467510 HS04A05r HS Hordeum vulgare subsp. v... 40 0.14
gb|BQ467646.1|BQ467646 HS04G23r HS Hordeum vulgare subsp. v... 40 0.14
gb|BM369749.2|BM369749 EBem07_SQ004_H24_R embryo, 28 DPA, n... 40 0.14
gb|BI776549.2|BI776549 EBpi05_SQ001_N14_R pistil, 8 DPA, no... 40 0.14
gb|BM442923.2|BM442923 EBro02_SQ001_N17_R root, 3 week, hyd... 40 0.14
gb|BQ765092.1|BQ765092 EBca01_SQ005_D19_R carpel, pre-anthe... 40 0.14
gb|BQ767689.1|BQ767689 EBro08_SQ009_H13_R root, 3 week, dro... 40 0.14
gb|CA001613.1|CA001613 HS05B06r HS Hordeum vulgare subsp. v... 40 0.14
gb|CA001781.1|CA001781 HS05J03r HS Hordeum vulgare subsp. v... 40 0.14
gb|CA004080.1|CA004080 HS16H17r HS Hordeum vulgare subsp. v... 40 0.14
gb|CA004785.1|CA004785 HS18K23r HS Hordeum vulgare subsp. v... 40 0.14
gb|CA012182.1|CA012182 HT04L19r HT Hordeum vulgare subsp. v... 40 0.14
gb|CA013624.1|CA013624 HT09A14r HT Hordeum vulgare subsp. v... 40 0.14
gb|CA014093.1|CA014093 HT10F20r HT Hordeum vulgare subsp. v... 40 0.14
gb|CA014271.1|CA014271 HT10O05r HT Hordeum vulgare subsp. v... 40 0.14
gb|CA014392.1|CA014392 HT11D14r HT Hordeum vulgare subsp. v... 40 0.14
gb|CA015258.1|CA015258 HT13M04r HT Hordeum vulgare subsp. v... 40 0.14
gb|CA015289.1|CA015289 HT13N17r HT Hordeum vulgare subsp. v... 40 0.14
gb|CA015381.1|CA015381 HT14C07r HT Hordeum vulgare subsp. v... 40 0.14
gb|CA015590.1|CA015590 HT14M12r HT Hordeum vulgare subsp. v... 40 0.14
gb|CA023217.1|CA023217 HZ45J07r HZ Hordeum vulgare subsp. v... 40 0.14
gb|CA024893.1|CA024893 HZ50K02r HZ Hordeum vulgare subsp. v... 40 0.14
gb|CA025920.1|CA025920 HZ53I14r HZ Hordeum vulgare subsp. v... 40 0.14
gb|CA027026.1|CA027026 HZ57K21r HZ Hordeum vulgare subsp. v... 40 0.14
gb|CA027071.1|CA027071 HZ57M23r HZ Hordeum vulgare subsp. v... 40 0.14
gb|CA027925.1|CA027925 HZ60H09r HZ Hordeum vulgare subsp. v... 40 0.14
gb|CA028145.1|CA028145 HZ61C04r HZ Hordeum vulgare subsp. v... 40 0.14
gb|CA028873.1|CA028873 HZ63H22r HZ Hordeum vulgare subsp. v... 40 0.14
gb|CA029001.1|CA029001 HZ63O10r HZ Hordeum vulgare subsp. v... 40 0.14
gb|CA029484.1|CA029484 HZ65F17r HZ Hordeum vulgare subsp. v... 40 0.14
gb|BJ547998.1|BJ547998 BJ547998 K. Sato unpublished cDNA li... 40 0.14
gb|BJ548174.1|BJ548174 BJ548174 K. Sato unpublished cDNA li... 40 0.14
gb|BJ548320.1|BJ548320 BJ548320 K. Sato unpublished cDNA li... 40 0.14
gb|BJ548529.1|BJ548529 BJ548529 K. Sato unpublished cDNA li... 40 0.14
gb|BJ548536.1|BJ548536 BJ548536 K. Sato unpublished cDNA li... 40 0.14
gb|CK122333.1|CK122333 BES1824102o06 BES1824 Hordeum vulgar... 40 0.14
gb|AF109194.1|AF109194 Hordeum vulgare glutathione-S-transf... 40 0.14
>gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017J19f, mRNA sequence
Length = 834
Score = 139 bits (70), Expect = 2e-031
Identities = 153/180 (85%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 246 caacccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtc 305
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 143 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 202
Query: 306 actcgtcatcatgcagtacgtcgacgagct---gttcgccggccggccgatcctcccaac 362
| |||||| ||||||||||||||||| | || ||||||| || |||||||| |
Sbjct: 203 gcaggtcatcgtgcagtacgtcgacgaggtctggtccgccggcgcccccatcctccccgc 262
Query: 363 cgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaagttgtt 422
||||||||||| |||||||| || ||||||||||| ||||||| |||||||||| ||||
Sbjct: 263 cgacccctacgcccgcgccaccgcccgcttctgggccgcctacgtcgacgacaagctgtt 322
>gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021D06f, mRNA sequence
Length = 793
Score = 139 bits (70), Expect = 2e-031
Identities = 234/288 (81%), Gaps = 3/288 (1%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||||| | |||||||| ||||||| || ||| | |||||
Sbjct: 52 ggtgagcccgttcgtgacccgcgtccggctggcgctgcacatgaagggcgtgggctacga 111
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| ||||| |||| | ||||| | |||||||| ||| | ||||||||||||
Sbjct: 112 gtacatcgagacggacgtgctggacaagggcgagctcctcctccgctacaacccggtgca 171
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|||||||||||||||||||||||||||||| ||| |||||||||| | |||||| |
Sbjct: 172 caagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtcgcaggtcatcgt 231
Query: 318 gcagtacgtcgacgagct---gttcgccggccggccgatcctcccaaccgacccctacga 374
|||||||||||||||| | || ||||||| || |||||||| ||||||||||||
Sbjct: 232 gcagtacgtcgacgaggtctggtccgccggcgcccccatcctccccgccgacccctacgc 291
Query: 375 gcgcgccactgctcgcttctgggctgcctacgccgacgacaagttgtt 422
|||||||| || ||||||||||| ||||||| |||||||||| ||||
Sbjct: 292 ccgcgccaccgcccgcttctgggccgcctacgtcgacgacaagctgtt 339
>gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_A18 5', mRNA sequence
Length = 480
Score = 131 bits (66), Expect = 5e-029
Identities = 233/288 (80%), Gaps = 3/288 (1%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||||| | |||||||| ||||||| || ||| | |||||
Sbjct: 58 ggtgagcccgttcgtgacccgcgtccggctggcgctgcacatgaagggcgtgggctacga 117
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| ||||| |||| | ||||| | |||||||| ||| | ||||||||||||
Sbjct: 118 gtacatcgagacggacgtgctggacaagggcgagctcctcctccgctacaacccggtgca 177
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|||||||||||||||||||||||||||||| ||| |||||||||| | |||||| |
Sbjct: 178 caagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtcgcaggtcatcgt 237
Query: 318 gcagtacgtcgacgagct---gttcgccggccggccgatcctcccaaccgacccctacga 374
|||||||||||||||| | | ||||||| || |||||||| ||||||||||||
Sbjct: 238 gcagtacgtcgacgaggtctggcccgccggcgcccccatcctccccgccgacccctacgc 297
Query: 375 gcgcgccactgctcgcttctgggctgcctacgccgacgacaagttgtt 422
|||||||| || ||||||||||| ||||||| |||||||||| ||||
Sbjct: 298 ccgcgccaccgcccgcttctgggccgcctacgtcgacgacaagctgtt 345
>gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44A05
5-PRIME, mRNA sequence
Length = 588
Score = 131 bits (66), Expect = 5e-029
Identities = 233/288 (80%), Gaps = 3/288 (1%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||||| | |||||||| ||||||| || ||| | |||||
Sbjct: 63 ggtgagcccgttcgtgacccgcgtccggctggcgctgcacatgaagggcgtgggctacga 122
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| ||||| |||| | ||||| | |||||||| ||| | ||||||||||||
Sbjct: 123 gtacatcgagacggacgtgctggacaagggcgagctcctcctccgctacaacccggtgca 182
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|||||||||||||||||||||||||||||| ||| |||||||||| | |||||| |
Sbjct: 183 caagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtcgcaggtcatcgt 242
Query: 318 gcagtacgtcgacgagct---gttcgccggccggccgatcctcccaaccgacccctacga 374
|||||||||||||||| | | ||||||| || |||||||| ||||||||||||
Sbjct: 243 gcagtacgtcgacgaggtctggcccgccggcgcccccatcctccccgccgacccctacgc 302
Query: 375 gcgcgccactgctcgcttctgggctgcctacgccgacgacaagttgtt 422
|||||||| || ||||||||||| ||||||| |||||||||| ||||
Sbjct: 303 ccgcgccaccgcccgcttctgggccgcctacgtcgacgacaagctgtt 350
>gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005F03f, mRNA sequence
Length = 946
Score = 127 bits (64), Expect = 8e-028
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||| || || |||| ||| | |||||| | ||| | |||||
Sbjct: 44 ggtgagcccgttcgtgatccgtgtacgcatggcactgcagatgaaacgcgtgggctacga 103
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| | ||| ||||| | | || |||| | |||||||| ||||||||||||||||||||
Sbjct: 104 gtacatggagcaggacctgttcaccaagggcgagctcctcctcaagtccaacccggtgca 163
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|| |||||| || |||||||||||| |||| || ||||||||||||| || | |||| |
Sbjct: 164 catgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtcgctggccatcgt 223
Query: 318 gcagtacgtcgacgag 333
||||||||||||||||
Sbjct: 224 gcagtacgtcgacgag 239
Score = 71.9 bits (36), Expect = 4e-011
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 352 atcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgac 411
|||||||| ||||||||||||| |||||| | |||||||||||||| ||||||||||||
Sbjct: 264 atcctccccgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 323
>gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11b21 5', mRNA sequence
Length = 552
Score = 127 bits (64), Expect = 8e-028
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||| || || |||| ||| | |||||| | ||| | |||||
Sbjct: 34 ggtgagcccgttcgtgatccgtgtacgcatggcactgcagatgaaacgcgtgggctacga 93
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| | ||| ||||| | | || |||| | |||||||| ||||||||||||||||||||
Sbjct: 94 gtacatggagcaggacctgttcaccaagggcgagctcctcctcaagtccaacccggtgca 153
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|| |||||| || |||||||||||| |||| || ||||||||||||| || | |||| |
Sbjct: 154 catgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtcgctggccatcgt 213
Query: 318 gcagtacgtcgacgag 333
||||||||||||||||
Sbjct: 214 gcagtacgtcgacgag 229
Score = 71.9 bits (36), Expect = 4e-011
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 352 atcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgac 411
|||||||| ||||||||||||| |||||| | |||||||||||||| ||||||||||||
Sbjct: 254 atcctccccgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 313
>gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hydroponic grown, low nitrogen,
cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA
clone EBro02_SQ006_H16 5', mRNA sequence
Length = 701
Score = 127 bits (64), Expect = 8e-028
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||| || || |||| ||| | |||||| | ||| | |||||
Sbjct: 9 ggtgagcccgttcgtgatccgtgtacgcatggcactgcagatgaaacgcgtgggctacga 68
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| | ||| ||||| | | || |||| | |||||||| ||||||||||||||||||||
Sbjct: 69 gtacatggagcaggacctgttcaccaagggcgagctcctcctcaagtccaacccggtgca 128
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|| |||||| || |||||||||||| |||| || ||||||||||||| || | |||| |
Sbjct: 129 catgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtcgctggccatcgt 188
Query: 318 gcagtacgtcgacgag 333
||||||||||||||||
Sbjct: 189 gcagtacgtcgacgag 204
Score = 71.9 bits (36), Expect = 4e-011
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 352 atcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgac 411
|||||||| ||||||||||||| |||||| | |||||||||||||| ||||||||||||
Sbjct: 229 atcctccccgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 288
>gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. vulgare cDNA clone HT09F05
5-PRIME, mRNA sequence
Length = 615
Score = 127 bits (64), Expect = 8e-028
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||| || || |||| ||| | |||||| | ||| | |||||
Sbjct: 41 ggtgagcccgttcgtgatccgtgtacgcatggcactgcagatgaaacgcgtgggctacga 100
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| | ||| ||||| | | || |||| | |||||||| ||||||||||||||||||||
Sbjct: 101 gtacatggagcaggacctgttcaccaagggcgagctcctcctcaagtccaacccggtgca 160
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|| |||||| || |||||||||||| |||| || ||||||||||||| || | |||| |
Sbjct: 161 catgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtcgctggccatcgt 220
Query: 318 gcagtacgtcgacgag 333
||||||||||||||||
Sbjct: 221 gcagtacgtcgacgag 236
Score = 71.9 bits (36), Expect = 4e-011
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 352 atcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgac 411
|||||||| ||||||||||||| |||||| | |||||||||||||| ||||||||||||
Sbjct: 261 atcctccccgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 320
Score = 40.1 bits (20), Expect = 0.14
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 455 cggaggaggagagggcggagaagg 478
||||||||||||| ||||||||||
Sbjct: 364 cggaggaggagagagcggagaagg 387
>gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak22d17 5', mRNA sequence
Length = 606
Score = 127 bits (64), Expect = 8e-028
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||| || || |||| ||| | |||||| | ||| | |||||
Sbjct: 34 ggtgagcccgttcgtgatccgtgtacgcatggcactgcagatgaaacgcgtgggctacga 93
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| | ||| ||||| | | || |||| | |||||||| ||||||||||||||||||||
Sbjct: 94 gtacatggagcaggacctgttcaccaagggcgagctcctcctcaagtccaacccggtgca 153
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|| |||||| || |||||||||||| |||| || ||||||||||||| || | |||| |
Sbjct: 154 catgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtcgctggccatcgt 213
Query: 318 gcagtacgtcgacgag 333
||||||||||||||||
Sbjct: 214 gcagtacgtcgacgag 229
Score = 71.9 bits (36), Expect = 4e-011
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 352 atcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgac 411
|||||||| ||||||||||||| |||||| | |||||||||||||| ||||||||||||
Sbjct: 254 atcctccccgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 313
>gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31o05 5', mRNA sequence
Length = 605
Score = 127 bits (64), Expect = 8e-028
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||| || || |||| ||| | |||||| | ||| | |||||
Sbjct: 15 ggtgagcccgttcgtgatccgtgtacgcatggcactgcatatgaaacgcgtgggctacga 74
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| | ||| ||||| | | || |||| | |||||||| ||||||||||||||||||||
Sbjct: 75 gtacatggagcaggacctgttcaccaagggcgagctcctcctcaagtccaacccggtgca 134
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|| |||||| || |||||||||||| |||| || ||||||||||||| || | |||| |
Sbjct: 135 catgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtcgctggccatcgt 194
Query: 318 gcagtacgtcgacgag 333
||||||||||||||||
Sbjct: 195 gcagtacgtcgacgag 210
Score = 71.9 bits (36), Expect = 4e-011
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 352 atcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgac 411
|||||||| ||||||||||||| |||||| | |||||||||||||| ||||||||||||
Sbjct: 235 atcctccccgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 294
>gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l18 5', mRNA sequence
Length = 676
Score = 125 bits (63), Expect = 3e-027
Identities = 120/139 (86%)
Strand = Plus / Plus
Query: 195 cgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggt 254
|||| |||||||||||||| | |||||||||| || ||||| ||| ||||||||||||
Sbjct: 174 cgaggacgtcgaggaggacctcgccaacaagagcgaactcctcctcgagtccaacccggc 233
Query: 255 gcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcat 314
||| ||||||||||||||||||||||| ||||| |||||| ||||||| || | |||||
Sbjct: 234 gcagaagaaggtgcccgtgctcatccataacggcaagcccgtctgcgactcgcaggtcat 293
Query: 315 catgcagtacgtcgacgag 333
| |||||||| ||||||||
Sbjct: 294 cgtgcagtacatcgacgag 312
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 353 tcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacg 412
||||||| |||||||||||||||||||| |||||||||||||| ||||||| |||||
Sbjct: 338 tcctccccgccgacccctacgagcgcgccgtcgctcgcttctgggccgcctacgtcgacg 397
Query: 413 acaag 417
|||||
Sbjct: 398 acaag 402
>gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. vulgare cDNA clone HR01D11
5-PRIME, mRNA sequence
Length = 500
Score = 125 bits (63), Expect = 3e-027
Identities = 190/231 (82%), Gaps = 6/231 (2%)
Strand = Plus / Plus
Query: 193 tacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccg 252
|||||||||||||||||||| | |||||||||| || ||| | ||| |||||||||
Sbjct: 168 tacgagtacgtcgaggaggagctcgccaacaagagcgacctcttcctccgctccaacccg 227
Query: 253 gtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtc 312
|| ||||||| ||| ||||||||||||||| |||| ||||||||||||||||| | |||
Sbjct: 228 gtacacaagacggttcccgtgctcatccacgacggcaagcccatctgcgagtcccaggtc 287
Query: 313 atcatgcagtacgtcgacgagctgttcgccggc--cggc----cgatcctcccaaccgac 366
||| |||||||| |||||||| ||||||||| |||| | ||||||| |||||
Sbjct: 288 atcctgcagtacatcgacgaggccttcgccggcgtcggcccgtccctcctccccgccgac 347
Query: 367 ccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaag 417
||||||||||||||| || ||||||||||| ||||||| ||| ||||||
Sbjct: 348 ccctacgagcgcgccgtcgcgcgcttctgggccgcctacgtcgaagacaag 398
>gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. vulgare cDNA clone HV01D06
5-PRIME, mRNA sequence
Length = 629
Score = 125 bits (63), Expect = 3e-027
Identities = 120/139 (86%)
Strand = Plus / Plus
Query: 195 cgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggt 254
|||| |||||||||||||| | |||||||||| || ||||| ||| ||||||||||||
Sbjct: 164 cgaggacgtcgaggaggacctcgccaacaagagcgaactcctcctcgagtccaacccggc 223
Query: 255 gcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcat 314
||| ||||||||||||||||||||||| ||||| |||||| ||||||| || | |||||
Sbjct: 224 gcagaagaaggtgcccgtgctcatccataacggcaagcccgtctgcgactcgcaggtcat 283
Query: 315 catgcagtacgtcgacgag 333
| |||||||| ||||||||
Sbjct: 284 cgtgcagtacatcgacgag 302
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 353 tcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacg 412
||||||| |||||||||||||||||||| |||||||||||||| ||||||| |||||
Sbjct: 328 tcctccccgccgacccctacgagcgcgccgtcgctcgcttctgggccgcctacgtcgacg 387
Query: 413 acaag 417
|||||
Sbjct: 388 acaag 392
>gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. vulgare cDNA clone HV04K06
5-PRIME, mRNA sequence
Length = 414
Score = 125 bits (63), Expect = 3e-027
Identities = 120/139 (86%)
Strand = Plus / Plus
Query: 195 cgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggt 254
|||| |||||||||||||| | |||||||||| || ||||| ||| ||||||||||||
Sbjct: 164 cgaggacgtcgaggaggacctcgccaacaagagcgaactcctcctcgagtccaacccggc 223
Query: 255 gcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcat 314
||| ||||||||||||||||||||||| ||||| |||||| ||||||| || | |||||
Sbjct: 224 gcagaagaaggtgcccgtgctcatccataacggcaagcccgtctgcgactcgcaggtcat 283
Query: 315 catgcagtacgtcgacgag 333
| |||||||| ||||||||
Sbjct: 284 cgtgcagtacatcgacgag 302
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 353 tcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacg 412
||||||| |||||||||||||||||||| |||||||||||||| ||||||| |||||
Sbjct: 328 tcctccccgccgacccctacgagcgcgccgtcgctcgcttctgggccgcctacgtcgacg 387
Query: 413 acaag 417
|||||
Sbjct: 388 acaag 392
>gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0019L19f, mRNA sequence
Length = 624
Score = 123 bits (62), Expect = 1e-026
Identities = 232/288 (80%), Gaps = 3/288 (1%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||||| | |||||||| ||||||| || ||| | |||||
Sbjct: 91 ggtgagcccgttcgtgacccgcgtccggctggcgctgcacatgaagggcgtgggctacga 150
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| ||||| |||| | ||||| | |||||||| ||| | ||||||||||||
Sbjct: 151 gtacatcgagacggacgtgctggacaagggcgagctcctcctccgctacaacccggtgca 210
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|||||||||||||||||||||||||||||| ||| |||||||||| | |||||| |
Sbjct: 211 caagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtcgcaggtcatcgt 270
Query: 318 gcagtacgtcgacgagct---gttcgccggccggccgatcctcccaaccgacccctacga 374
|||||||||||||||| | || ||||||| || |||||||| ||||||||||||
Sbjct: 271 gcagtacgtcgacgaggtctggtccgccggcgcccccatcctccccgccgacccctacgc 330
Query: 375 gcgcgccactgctcgcttctgggctgcctacgccgacgacaagttgtt 422
|||||||| || || || ||||| ||||||| |||||||||| ||||
Sbjct: 331 ccgcgccaccgcccgtttttgggccgcctacgtcgacgacaagctgtt 378
>gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002K18f, mRNA sequence
Length = 717
Score = 123 bits (62), Expect = 1e-026
Identities = 232/288 (80%), Gaps = 3/288 (1%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||||| | |||||||| ||||||| || ||| | |||||
Sbjct: 44 ggtgagcccgttcgtgacccgcgtccggctggcgctgcacatgaagggcgtgggctacga 103
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| ||||| |||| | ||||| | |||||||| ||| | ||||||||||||
Sbjct: 104 gtacatcgagacggacgtgctggacaagggcgagctcctcctccgctacaacccggtgca 163
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|||||||||||||||||||||||||||||| ||| |||||||||| | |||||| |
Sbjct: 164 caagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtcgcaggtcatcgt 223
Query: 318 gcagtacgtcgacgagct---gttcgccggccggccgatcctcccaaccgacccctacga 374
|||||||||||||||| | | ||||||| || |||||||| ||||||||||||
Sbjct: 224 gcagtacgtcgacgaggtctggcccgccggcgcccccatcctccccgccgacccctacgc 283
Query: 375 gcgcgccactgctcgcttctgggctgcctacgccgacgacaagttgtt 422
|||||||| || ||||| ||||| ||||||| |||||||||| ||||
Sbjct: 284 ccgcgccaccgcccgcttatgggccgcctacgtcgacgacaagctgtt 331
>gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006C01f, mRNA sequence
Length = 783
Score = 121 bits (61), Expect = 5e-026
Identities = 228/283 (80%), Gaps = 3/283 (1%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||||| | |||||||| ||||||| || ||| | |||||
Sbjct: 34 ggtgagcccgttcgtgacccgcgtccggctggcgctgcacatgaagggcgtgggctacga 93
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| ||||| |||| | ||||| | |||||||| ||| | ||||||||||||
Sbjct: 94 gtacatcgagacggacgtgctggacaagggcgagctcctcctccgctacaacccggtgca 153
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|||||||||||||||||||||||||||||| ||| |||||||||| | |||||| |
Sbjct: 154 caagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtcgcaggtcatcgt 213
Query: 318 gcagtacgtcgacgagct---gttcgccggccggccgatcctcccaaccgacccctacga 374
||||||||||||| || | || ||||||| || |||||||| ||||||||||||
Sbjct: 214 gcagtacgtcgacaaggtctggtccgccggcgcccccatcctccccgccgacccctacgc 273
Query: 375 gcgcgccactgctcgcttctgggctgcctacgccgacgacaag 417
|||||||| || ||||||||||| | ||||| ||||||||||
Sbjct: 274 ccgcgccaccgcccgcttctgggccgtctacgtcgacgacaag 316
>gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06I07V 5', mRNA sequence
Length = 394
Score = 119 bits (60), Expect = 2e-025
Identities = 90/100 (90%)
Strand = Plus / Plus
Query: 188 tgagttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtcca 247
|||| |||||| |||| |||||| || | ||||||||||| |||||||| ||||||||||
Sbjct: 165 tgagctacgaggacgtggaggagaacctgtccaacaagagcgagctcctcctcaagtcca 224
Query: 248 acccggtgcacaagaaggtgcccgtgctcatccacaacgg 287
||||||||||||||||| | ||||||||||||||||||||
Sbjct: 225 acccggtgcacaagaagatacccgtgctcatccacaacgg 264
>gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09J19V 5', mRNA sequence
Length = 500
Score = 119 bits (60), Expect = 2e-025
Identities = 90/100 (90%)
Strand = Plus / Plus
Query: 188 tgagttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtcca 247
|||| |||||| |||| |||||| || | ||||||||||| |||||||| ||||||||||
Sbjct: 187 tgagctacgaggacgtggaggagaacctgtccaacaagagcgagctcctcctcaagtcca 246
Query: 248 acccggtgcacaagaaggtgcccgtgctcatccacaacgg 287
||||||||||||||||| | ||||||||||||||||||||
Sbjct: 247 acccggtgcacaagaagatacccgtgctcatccacaacgg 286
Score = 44.1 bits (22), Expect = 0.009
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 364 gacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaag 417
||||||||||| |||||| ||||||||||||| ||||||| |||||||||
Sbjct: 369 gacccctacgaacgcgccgtggctcgcttctgggtggcctacgttgacgacaag 422
>gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007C21f, mRNA sequence
Length = 694
Score = 119 bits (60), Expect = 2e-025
Identities = 90/100 (90%)
Strand = Plus / Plus
Query: 188 tgagttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtcca 247
|||| |||||| |||| |||||| || | ||||||||||| |||||||| ||||||||||
Sbjct: 172 tgagctacgaggacgtggaggagaacctgtccaacaagagcgagctcctcctcaagtcca 231
Query: 248 acccggtgcacaagaaggtgcccgtgctcatccacaacgg 287
||||||||||||||||| | ||||||||||||||||||||
Sbjct: 232 acccggtgcacaagaagatacccgtgctcatccacaacgg 271
Score = 44.1 bits (22), Expect = 0.009
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 364 gacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaag 417
||||||||||| |||||| ||||||||||||| ||||||| |||||||||
Sbjct: 354 gacccctacgaacgcgccgtggctcgcttctgggtggcctacgttgacgacaag 407
>gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015B01f, mRNA sequence
Length = 720
Score = 119 bits (60), Expect = 2e-025
Identities = 90/100 (90%)
Strand = Plus / Plus
Query: 188 tgagttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtcca 247
|||| |||||| |||| |||||| || | ||||||||||| |||||||| ||||||||||
Sbjct: 185 tgagctacgaggacgtggaggagaacctgtccaacaagagcgagctcctcctcaagtcca 244
Query: 248 acccggtgcacaagaaggtgcccgtgctcatccacaacgg 287
||||||||||||||||| | ||||||||||||||||||||
Sbjct: 245 acccggtgcacaagaagatacccgtgctcatccacaacgg 284
Score = 44.1 bits (22), Expect = 0.009
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 364 gacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaag 417
||||||||||| |||||| ||||||||||||| ||||||| |||||||||
Sbjct: 367 gacccctacgaacgcgccgtggctcgcttctgggtggcctacgttgacgacaag 420
>gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B04_T3.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 897
Score = 117 bits (59), Expect = 7e-025
Identities = 189/231 (81%), Gaps = 6/231 (2%)
Strand = Plus / Plus
Query: 193 tacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccg 252
|||||||||||||||||||| | |||||||||| || ||| | ||| |||||||||
Sbjct: 191 tacgagtacgtcgaggaggagctcgccaacaagagcgacctcttcctccgctccaacccg 250
Query: 253 gtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtc 312
|| ||||||| ||| ||||||||||||||| |||| ||||||||||||||||| | |||
Sbjct: 251 gtacacaagacggttcccgtgctcatccacgacggcaagcccatctgcgagtcccaggtc 310
Query: 313 atcatgcagtacgtcgacgagctgttcgccggc--cggc----cgatcctcccaaccgac 366
||| |||||||| |||||||| ||||||||| |||| | ||||||| ||||
Sbjct: 311 atcctgcagtacatcgacgaggccttcgccggcgtcggcccgtccctcctccccgccgat 370
Query: 367 ccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaag 417
||||||||||||||| || ||||||||||| ||||||| ||| ||||||
Sbjct: 371 ccctacgagcgcgccgtcgcgcgcttctgggccgcctacgtcgaagacaag 421
>gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. vulgare cDNA clone HF22C07
5-PRIME, mRNA sequence
Length = 599
Score = 117 bits (59), Expect = 7e-025
Identities = 110/127 (86%)
Strand = Plus / Plus
Query: 188 tgagttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtcca 247
|||| ||||||||||| ||| ||||| | ||||||||| || ||||| |||| |||||
Sbjct: 223 tgagctacgagtacgtggagcaggacctcgacaacaagagcgacctcctcctcatgtcca 282
Query: 248 acccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcac 307
||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||
Sbjct: 283 acccggtgcacaagaaggtgcccgtgctcatccacaatggcaagccaatctgtgagtcgg 342
Query: 308 tcgtcat 314
|||||||
Sbjct: 343 tcgtcat 349
>gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. vulgare cDNA clone HT03K17
5-PRIME, mRNA sequence
Length = 558
Score = 117 bits (59), Expect = 7e-025
Identities = 158/191 (82%)
Strand = Plus / Plus
Query: 143 gcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacgagtacg 202
||||||||||| |||| || || |||| ||| | |||||| | ||| | |||||||||
Sbjct: 10 gcccgttcgtgatccgtgtacgcatggcactgcagatgaaacgcgtgggctacgagtaca 69
Query: 203 tcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgcacaaga 262
| ||| ||||| | | || |||| | |||||||| |||||||||||||||||||||| ||
Sbjct: 70 tggagcaggacctgttcaccaagggcgagctcctcctcaagtccaacccggtgcacatga 129
Query: 263 aggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcatgcagt 322
|||| || |||||||||||| |||| || ||||||||||||| || | |||| ||||||
Sbjct: 130 aggtcccggtgctcatccacgacggcaaatccatctgcgagtcgctggccatcgtgcagt 189
Query: 323 acgtcgacgag 333
|||||||||||
Sbjct: 190 acgtcgacgag 200
Score = 71.9 bits (36), Expect = 4e-011
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 352 atcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgac 411
|||||||| ||||||||||||| |||||| | |||||||||||||| ||||||||||||
Sbjct: 225 atcctccccgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 284
>gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015C04f, mRNA sequence
Length = 826
Score = 111 bits (56), Expect = 5e-023
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 200 acgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgcaca 259
|||| |||||| || | ||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 201 acgtggaggagaacctgtccaacaagagcgagctccttctcaagtccaacccggtgcaca 260
Query: 260 agaaggtgcccgtgctcatccacaacgg 287
||||| | ||||||||||||||||||||
Sbjct: 261 agaagatacccgtgctcatccacaacgg 288
>gb|BG299996.1|BG299996 HVSMEa0022O20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0022O20f, mRNA sequence
Length = 549
Score = 107 bits (54), Expect = 7e-022
Identities = 111/130 (85%)
Strand = Plus / Plus
Query: 167 tggcgctgaacatgaaaggagtgagttacgagtacgtcgaggaggacatatccaacaaga 226
|||||||| |||||||||| |||| |||||||| |||| ||||| | | ||||||||
Sbjct: 89 tggcgctgcacatgaaaggcctgagctacgagtatatcgaacaggaccttttcaacaaga 148
Query: 227 gtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatccacaacg 286
| ||||| || |||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct: 149 gcgagcttctcctcaagtccaacccggtggagaagaaggtgcccgtgctcatccacgacg 208
Query: 287 gtaagcccat 296
| ||| ||||
Sbjct: 209 gcaagaccat 218
Score = 44.1 bits (22), Expect = 0.009
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 350 cgatcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccg 409
|||||||||| |||||||||||| |||||| | ||||| ||||| |||||||| |
Sbjct: 278 cgatcctccccgtcgacccctacgaccgcgccgtctcccgcttttgggccgcctacgcgg 337
Query: 410 acgacaagttgttt 423
|||||||| |||||
Sbjct: 338 acgacaagctgttt 351
>gb|BF256380.2|BF256380 HVSMEf0009H03f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0009H03f, mRNA sequence
Length = 257
Score = 103 bits (52), Expect = 1e-020
Identities = 160/196 (81%)
Strand = Plus / Plus
Query: 138 ggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacga 197
|||||||||||||||| |||||| | |||||||| ||||||| || ||| | |||||
Sbjct: 56 ggtgagcccgttcgtgacccgcgtccggctggcgctgcacatgaagggcgtgggctacga 115
Query: 198 gtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccggtgca 257
|||| ||||| |||| | ||||| | |||||||| ||| | ||||||||||||
Sbjct: 116 gtacatcgagacggacgtgctggacaagggcgagctcctcctccgctacaacccggtgca 175
Query: 258 caagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcatcat 317
|||||||||||||||||||||||||||||| ||| |||||||||| | |||||| |
Sbjct: 176 caagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtcgcaggtcatcgt 235
Query: 318 gcagtacgtcgacgag 333
||||||||||||||||
Sbjct: 236 gcagtacgtcgacgag 251
>gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002G13f, mRNA sequence
Length = 698
Score = 99.6 bits (50), Expect = 2e-019
Identities = 110/130 (84%)
Strand = Plus / Plus
Query: 167 tggcgctgaacatgaaaggagtgagttacgagtacgtcgaggaggacatatccaacaaga 226
|||||||| ||||||| || |||| |||||||| |||| ||||| | | ||||||||
Sbjct: 91 tggcgctgcacatgaagggcctgagctacgagtatatcgaacaggacctcttcaacaaga 150
Query: 227 gtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatccacaacg 286
| ||||| || |||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct: 151 gcgagcttctcctcaagtccaacccggtggagaagaaggtgcccgtgctcatccacgacg 210
Query: 287 gtaagcccat 296
| ||| ||||
Sbjct: 211 gcaagaccat 220
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 350 cgatcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccg 409
|||||||||| |||||||||||| |||||| | | ||||| ||||| |||||||| |
Sbjct: 280 cgatcctccccgtcgacccctacgaccgcgccgcctcccgcttttgggccgcctacgcgg 339
Query: 410 acgacaagttgtt 422
|||||||| ||||
Sbjct: 340 acgacaagctgtt 352
>gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011E08f, mRNA sequence
Length = 639
Score = 99.6 bits (50), Expect = 2e-019
Identities = 110/130 (84%)
Strand = Plus / Plus
Query: 167 tggcgctgaacatgaaaggagtgagttacgagtacgtcgaggaggacatatccaacaaga 226
|||||||| ||||||| || |||| |||||||| |||| ||||| | | ||||||||
Sbjct: 104 tggcgctgcacatgaagggcctgagctacgagtatatcgaacaggacctcttcaacaaga 163
Query: 227 gtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatccacaacg 286
| ||||| || |||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct: 164 gcgagcttctcctcaagtccaacccggtggagaagaaggtgcccgtgctcatccacgacg 223
Query: 287 gtaagcccat 296
| ||| ||||
Sbjct: 224 gcaagaccat 233
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 350 cgatcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccg 409
|||||||||| |||||||||||| |||||| | | ||||| ||||| |||||||| |
Sbjct: 293 cgatcctccccgtcgacccctacgaccgcgccgcctcccgcttttgggccgcctacgcgg 352
Query: 410 acgacaagttgtt 422
|||||||| ||||
Sbjct: 353 acgacaagctgtt 365
>gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013A10f, mRNA sequence
Length = 493
Score = 99.6 bits (50), Expect = 2e-019
Identities = 110/130 (84%)
Strand = Plus / Plus
Query: 167 tggcgctgaacatgaaaggagtgagttacgagtacgtcgaggaggacatatccaacaaga 226
|||||||| ||||||| || |||| |||||||| |||| ||||| | | ||||||||
Sbjct: 86 tggcgctgcacatgaagggcctgagctacgagtatatcgaacaggacctcttcaacaaga 145
Query: 227 gtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatccacaacg 286
| ||||| || |||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct: 146 gcgagcttctcctcaagtccaacccggtggagaagaaggtgcccgtgctcatccacgacg 205
Query: 287 gtaagcccat 296
| ||| ||||
Sbjct: 206 gcaagaccat 215
Score = 50.1 bits (25), Expect = 1e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 350 cgatcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccg 409
|||||||||| |||||||||||| |||||| | | ||||| ||||| |||||||| |
Sbjct: 275 cgatcctccccgtcgacccctacgaccgcgccgcctcccgcttttgggccgcctacgcgg 334
Query: 410 acgacaagttgtt 422
|||||||| ||||
Sbjct: 335 acgacaagctgtt 347
>gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089P24f, mRNA sequence
Length = 799
Score = 99.6 bits (50), Expect = 2e-019
Identities = 110/130 (84%)
Strand = Plus / Plus
Query: 167 tggcgctgaacatgaaaggagtgagttacgagtacgtcgaggaggacatatccaacaaga 226
|||||||| ||||||| || |||| |||||||| |||| ||||| | | ||||||||
Sbjct: 101 tggcgctgcacatgaagggcctgagctacgagtatatcgaacaggacctcttcaacaaga 160
Query: 227 gtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatccacaacg 286
| ||||| || |||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct: 161 gcgagcttctcctcaagtccaacccggtggagaagaaggtgcccgtgctcatccacgacg 220
Query: 287 gtaagcccat 296
| ||| ||||
Sbjct: 221 gcaagaccat 230
Score = 42.1 bits (21), Expect = 0.035
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 350 cgatcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccg 409
|||||||||| |||||||||||| |||||| | ||||| ||||| |||||||| |
Sbjct: 290 cgatcctccccgtcgacccctacgaccgcgccgccttccgcttttgggccgcctacgcgg 349
Query: 410 acgacaagttgtt 422
|||||||| ||||
Sbjct: 350 acgacaagctgtt 362
>gb|CA003018.1|CA003018 HS09C19r HS Hordeum vulgare subsp. vulgare cDNA clone HS09C19
5-PRIME, mRNA sequence
Length = 302
Score = 99.6 bits (50), Expect = 2e-019
Identities = 110/130 (84%)
Strand = Plus / Plus
Query: 167 tggcgctgaacatgaaaggagtgagttacgagtacgtcgaggaggacatatccaacaaga 226
|||||||| ||||||| || |||| |||||||| |||| ||||| | | ||||||||
Sbjct: 90 tggcgctgcacatgaagggcctgagctacgagtatatcgaacaggacctcttcaacaaga 149
Query: 227 gtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatccacaacg 286
| ||||| || |||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct: 150 gcgagcttctcctcaagtccaacccggtggagaagaaggtgcccgtgctcatccacgacg 209
Query: 287 gtaagcccat 296
| ||| ||||
Sbjct: 210 gcaagaccat 219
>gb|CA027668.1|CA027668 HZ59K12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59K12
5-PRIME, mRNA sequence
Length = 442
Score = 97.6 bits (49), Expect = 7e-019
Identities = 142/171 (83%), Gaps = 4/171 (2%)
Strand = Plus / Plus
Query: 255 gcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtcat 314
|||||||||||||||||||||||||| |||||| ||| |||||||||| | |||||
Sbjct: 10 gcacaagaaggtgcccgtgctcatcc-caacggcgtgccgctctgcgagtcgcaggtcat 68
Query: 315 catgcagtacgtcgacgagctgtt---cgccggccggccgatcctcccaaccgaccccta 371
| ||||||||||||||||| | | ||||||| || |||||||| ||||||||||
Sbjct: 69 cgtgcagtacgtcgacgaggtctggcccgccggcgcccccatcctccccgccgaccccta 128
Query: 372 cgagcgcgccactgctcgcttctgggctgcctacgccgacgacaagttgtt 422
|| |||||||| || ||||||||||| ||||||| |||||||||| ||||
Sbjct: 129 cgcccgcgccaccgcccgcttctgggccgcctacgtcgacgacaagctgtt 179
>gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020E15f, mRNA sequence
Length = 532
Score = 95.6 bits (48), Expect = 3e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 242 agtccaacccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcg 301
|||||||||||| ||| ||||||||||||||||||||||| ||||| |||||| ||||||
Sbjct: 5 agtccaacccggcgcaaaagaaggtgcccgtgctcatccataacggcaagcccgtctgcg 64
Query: 302 agtcactcgtcatcatgcagtacgtcgacgag 333
| || | |||||| |||||||| ||||||||
Sbjct: 65 actcgcaggtcatcgtgcagtacatcgacgag 96
Score = 58.0 bits (29), Expect = 6e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 353 tcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacg 412
||||||| ||||||||||| |||||||| |||||||||||||| | ||||| |||||
Sbjct: 122 tcctccccgccgacccctacaagcgcgccgtcgctcgcttctgggccgtctacgtcgacg 181
Query: 413 acaag 417
|||||
Sbjct: 182 acaag 186
>gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014H14f, mRNA sequence
Length = 857
Score = 93.7 bits (47), Expect = 1e-017
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 243 gtccaacccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcga 302
||||||||| |||||||||| |||||| ||||||||||||||||| |||||| || |||
Sbjct: 137 gtccaaccccgtgcacaagagggtgccggtgctcatccacaacggcaagcccgtccccga 196
Query: 303 gtcactcgtcatcatgcagtacgtcgacgag 333
||||| ||||| |||||||||||||||||
Sbjct: 197 gtcacagctcatcgtgcagtacgtcgacgag 227
>gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014K12f, mRNA sequence
Length = 966
Score = 93.7 bits (47), Expect = 1e-017
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 243 gtccaacccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcga 302
||||||||| |||||||||| |||||| ||||||||||||||||| |||||| || |||
Sbjct: 173 gtccaaccccgtgcacaagagggtgccggtgctcatccacaacggcaagcccgtccccga 232
Query: 303 gtcactcgtcatcatgcagtacgtcgacgag 333
||||| ||||| |||||||||||||||||
Sbjct: 233 gtcacagctcatcgtgcagtacgtcgacgag 263
Score = 40.1 bits (20), Expect = 0.14
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 353 tcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacg 412
||||||| ||||||| ||||||||||| |||||||||||||| |||||| |||||
Sbjct: 289 tcctcccttccgacccgcacgagcgcgccgtcgctcgcttctgggcctcctacgtcgacg 348
>gb|CA004877.1|CA004877 HS18P04r HS Hordeum vulgare subsp. vulgare cDNA clone HS18P04
5-PRIME, mRNA sequence
Length = 313
Score = 93.7 bits (47), Expect = 1e-017
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 243 gtccaacccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcga 302
||||||||| |||||||||| |||||| ||||||||||||||||| |||||| || |||
Sbjct: 168 gtccaaccccgtgcacaagagggtgccggtgctcatccacaacggcaagcccgtccccga 227
Query: 303 gtcactcgtcatcatgcagtacgtcgacgag 333
||||| ||||| |||||||||||||||||
Sbjct: 228 gtcacagctcatcgtgcagtacgtcgacgag 258
>gb|BF623830.2|BF623830 HVSMEa0007D03f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007D03f, mRNA sequence
Length = 492
Score = 91.7 bits (46), Expect = 4e-017
Identities = 109/130 (83%)
Strand = Plus / Plus
Query: 167 tggcgctgaacatgaaaggagtgagttacgagtacgtcgaggaggacatatccaacaaga 226
|||||||| ||||||| || |||| ||| |||| |||| ||||| ||| ||||||||
Sbjct: 102 tggcgctgcacatgaagggcctgagctactagtatatcgaacaggacctattcaacaaga 161
Query: 227 gtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatccacaacg 286
| ||||| | |||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct: 162 gcgagcttatcctcaagtccaacccggtggagaagaaggtgcccgtgctcatccacgacg 221
Query: 287 gtaagcccat 296
| ||| ||||
Sbjct: 222 gcaagaccat 231
Score = 40.1 bits (20), Expect = 0.14
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 363 cgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaagttgtt 422
|||||||||||| |||||| | ||||| ||||| |||||||| ||||||||| ||||
Sbjct: 304 cgacccctacgaccgcgccgcctaccgcttttgggccgcctacgcggacgacaagctgtt 363
>gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM005.F01, mRNA sequence
Length = 953
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
||||||||||||| || || || ||||||| |||||| |||||||||||||||| ||||
Sbjct: 472 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 531
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
||||||| || ||| || ||||||||||||| |||| || ||||| ||||||||
Sbjct: 532 tccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgag 587
>gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM007.F01, mRNA sequence
Length = 734
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
||||||||||||| || || || ||||||| |||||| |||||||||||||||| ||||
Sbjct: 234 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 293
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
||||||| || ||| || ||||||||||||| |||| || ||||| ||||||||
Sbjct: 294 tccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgag 349
>gb|BF626678.2|BF626678 HVSMEb0001A21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001A21f, mRNA sequence
Length = 851
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
||||||||||||| || || || ||||||| |||||| |||||||||||||||| ||||
Sbjct: 389 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 448
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
||||||| || ||| || ||||||||||||| |||| || ||||| ||||||||
Sbjct: 449 tccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgag 504
>gb|BE602348.2|BE602348 HVSMEh0098J09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098J09f, mRNA sequence
Length = 512
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
||||||||||||| || || || ||||||| |||||| |||||||||||||||| ||||
Sbjct: 396 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 455
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
||||||| || ||| || ||||||||||||| |||| || ||||| ||||||||
Sbjct: 456 tccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgag 511
>gb|BG368482.1|BG368482 HVSMEi0019D10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019D10f, mRNA sequence
Length = 603
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
||||||||||||| || || || ||||||| |||||| |||||||||||||||| ||||
Sbjct: 240 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 299
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
||||||| || ||| || ||||||||||||| |||| || ||||| ||||||||
Sbjct: 300 tccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgag 355
>gb|BI947132.1|BI947132 HVSMEl0003N16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0003N16f, mRNA sequence
Length = 1030
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
|||||||||| |||| || ||| |||||||||||||| || | |||||||||||||||
Sbjct: 355 ccaacaagagcaagcttcttctcgagtccaacccggtgaaccaagaggtgcccgtgctca 414
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
|||||||||| ||||||||| ||||| || | |||| || ||||||||||||||
Sbjct: 415 tccacaacggcgtgcccatctgtgagtcgcttgccatcttggagtacgtcgacgag 470
>gb|BI948019.1|BI948019 HVSMEl0007N21f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0007N21f, mRNA sequence
Length = 848
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
||||||||||||| || || || ||||||| |||||| |||||||||||||||| ||||
Sbjct: 389 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 448
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
||||||| || ||| || ||||||||||||| |||| || ||||| ||||||||
Sbjct: 449 tccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgag 504
>gb|BI949114.1|BI949114 HVSMEl0012G22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012G22f, mRNA sequence
Length = 855
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
||||||||||||| || || || ||||||| |||||| |||||||||||||||| ||||
Sbjct: 386 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 445
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
||||||| || ||| || ||||||||||||| |||| || ||||| ||||||||
Sbjct: 446 tccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgag 501
>gb|BI949614.1|BI949614 HVSMEl0014O15f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0014O15f, mRNA sequence
Length = 891
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
||||||||||||| || || || ||||||| |||||| |||||||||||||||| ||||
Sbjct: 384 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 443
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
||||||| || ||| || ||||||||||||| |||| || ||||| ||||||||
Sbjct: 444 tccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgag 499
>gb|BI953138.1|BI953138 HVSMEm0011D12f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0011D12f, mRNA sequence
Length = 474
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
||||||||||||| || || || ||||||| |||||| |||||||||||||||| ||||
Sbjct: 127 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 186
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
||||||| || ||| || ||||||||||||| |||| || ||||| ||||||||
Sbjct: 187 tccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgag 242
>gb|BI953646.1|BI953646 HVSMEm0013K24f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0013K24f, mRNA sequence
Length = 868
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
||||||||||||| || || || ||||||| |||||| |||||||||||||||| ||||
Sbjct: 404 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 463
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
||||||| || ||| || ||||||||||||| |||| || ||||| ||||||||
Sbjct: 464 tccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgag 519
>gb|BE216017.1|BE216017 HV_CEb0009C05f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009C05f, mRNA sequence
Length = 664
Score = 87.7 bits (44), Expect = 7e-016
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 218 ccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctca 277
||||||||||||| || || || ||||||| |||||| |||||||||||||||| ||||
Sbjct: 382 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 441
Query: 278 tccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
||||||| || ||| || ||||||||||||| |||| || ||||| ||||||||
Sbjct: 442 tccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgag 497
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 141,881
Number of Sequences: 312970
Number of extensions: 141881
Number of successful extensions: 45208
Number of sequences better than 0.5: 281
Number of HSP's better than 0.5 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44333
Number of HSP's gapped (non-prelim): 851
length of query: 1013
length of database: 175,134,539
effective HSP length: 19
effective length of query: 994
effective length of database: 169,188,109
effective search space: 168172980346
effective search space used: 168172980346
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)