BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713013.2.1
(3807 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF624748.2|BF624748 HVSMEa0017K05f Hordeum vulgare seedl... 714 0.0
gb|BQ468579.1|BQ468579 HM01K12T HM Hordeum vulgare subsp. v... 708 0.0
gb|CB882206.1|CB882206 HL01D01w HL Hordeum vulgare subsp. v... 688 0.0
gb|BU999035.1|BU999035 HI12P13r HI Hordeum vulgare subsp. v... 654 0.0
gb|BI956967.1|BI956967 HVSMEn0006I08f Hordeum vulgare rachi... 648 0.0
gb|CK124710.1|CK124710 BES1824110c01 BES1824 Hordeum vulgar... 630 e-179
gb|BQ471177.1|BQ471177 HV01F24T HV Hordeum vulgare subsp. v... 626 e-177
gb|BG368813.1|BG368813 HVSMEi0020M13f Hordeum vulgare 20 DA... 617 e-174
gb|AW982533.3|AW982533 HVSMEg0003I09f Hordeum vulgare pre-a... 617 e-174
gb|CB883651.1|CB883651 HQ02O03w HQ Hordeum vulgare subsp. v... 617 e-174
gb|AV836682.1|AV836682 AV836682 K. Sato unpublished cDNA li... 591 e-167
gb|AL504419.1|AL504419 AL504419 Hordeum vulgare Barke roots... 587 e-165
gb|BM816138.1|BM816138 HC109B12_T3.ab1 HC Hordeum vulgare s... 583 e-164
gb|CA019265.1|CA019265 HV11G20r HV Hordeum vulgare subsp. v... 569 e-160
gb|CV061189.1|CV061189 BNEL65h6 Barley EST endosperm librar... 569 e-160
gb|BQ471393.1|BQ471393 HV02E21r HV Hordeum vulgare subsp. v... 563 e-158
gb|BU995821.1|BU995821 HM11H13r HM Hordeum vulgare subsp. v... 541 e-152
gb|BF255020.3|BF255020 HVSMEf0005K21f Hordeum vulgare seedl... 519 e-145
gb|AV932043.1|AV932043 AV932043 K. Sato unpublished cDNA li... 517 e-145
gb|CA019676.1|CA019676 HV12L21r HV Hordeum vulgare subsp. v... 515 e-144
gb|CA031458.1|CA031458 HX10A06r HX Hordeum vulgare subsp. v... 509 e-142
gb|CA009062.1|CA009062 HU13B03r HU Hordeum vulgare subsp. v... 505 e-141
gb|BI951084.1|BI951084 HVSMEl0024F09f Hordeum vulgare spike... 482 e-134
gb|CA020225.1|CA020225 HV14L03r HV Hordeum vulgare subsp. v... 478 e-133
gb|BE193304.2|BE193304 HVSMEh0080I07f Hordeum vulgare 5-45 ... 446 e-123
gb|BF624752.2|BF624752 HVSMEa0017K09f Hordeum vulgare seedl... 434 e-120
gb|BE195554.3|BE195554 HVSMEh0089G13f Hordeum vulgare 5-45 ... 434 e-120
gb|AV914933.1|AV914933 AV914933 K. Sato unpublished cDNA li... 424 e-117
gb|BQ468619.1|BQ468619 HM01M13T HM Hordeum vulgare subsp. v... 416 e-114
gb|BQ463573.1|BQ463573 HI05L24r HI Hordeum vulgare subsp. v... 414 e-114
gb|CA012990.1|CA012990 HT07B01r HT Hordeum vulgare subsp. v... 410 e-112
gb|BF259426.2|BF259426 HVSMEf0019B07f Hordeum vulgare seedl... 402 e-110
gb|BM442929.2|BM442929 EBro02_SQ001_O08_R root, 3 week, hyd... 398 e-109
gb|BM816139.1|BM816139 HC105G09_T3.ab1 HC Hordeum vulgare s... 391 e-106
gb|BU986849.1|BU986849 HF13B10r HF Hordeum vulgare subsp. v... 383 e-104
gb|CB876338.1|CB876338 HX10P19w HX Hordeum vulgare subsp. v... 381 e-103
gb|BG414971.1|BG414971 HVSMEk0004I03f Hordeum vulgare testa... 379 e-103
gb|BI776485.2|BI776485 EBpi05_SQ001_J01_R pistil, 8 DPA, no... 371 e-100
gb|AV914152.1|AV914152 AV914152 K. Sato unpublished cDNA li... 369 e-100
gb|BQ739972.1|BQ739972 HB107G12 HB Hordeum vulgare subsp. v... 369 e-100
gb|BJ464018.1|BJ464018 BJ464018 K. Sato unpublished cDNA li... 361 1e-097
gb|AV925215.1|AV925215 AV925215 K. Sato unpublished cDNA li... 357 2e-096
gb|CA023762.1|CA023762 HZ47F10r HZ Hordeum vulgare subsp. v... 355 7e-096
gb|CB860194.1|CB860194 HI12P13w HI Hordeum vulgare subsp. v... 355 7e-096
gb|AV931092.1|AV931092 AV931092 K. Sato unpublished cDNA li... 351 1e-094
gb|BU967242.1|BU967242 HB03K11r BC Hordeum vulgare subsp. v... 351 1e-094
gb|AV931093.1|AV931093 AV931093 K. Sato unpublished cDNA li... 347 2e-093
gb|BU990492.1|BU990492 HF25D10r HF Hordeum vulgare subsp. v... 335 6e-090
gb|AV913277.1|AV913277 AV913277 K. Sato unpublished cDNA li... 321 1e-085
gb|AV913278.1|AV913278 AV913278 K. Sato unpublished cDNA li... 321 1e-085
gb|BQ465284.1|BQ465284 HU03C22r HU Hordeum vulgare subsp. v... 321 1e-085
gb|AV926207.1|AV926207 AV926207 K. Sato unpublished cDNA li... 317 2e-084
gb|AV930906.1|AV930906 AV930906 K. Sato unpublished cDNA li... 317 2e-084
gb|CA022476.1|CA022476 HZ43F10r HZ Hordeum vulgare subsp. v... 317 2e-084
gb|BU988138.1|BU988138 HF16M09r HF Hordeum vulgare subsp. v... 313 2e-083
gb|BU989992.1|BU989992 HF23J07r HF Hordeum vulgare subsp. v... 311 9e-083
gb|AV832882.1|AV832882 AV832882 K. Sato unpublished cDNA li... 295 6e-078
gb|AL503512.1|AL503512 AL503512 Hordeum vulgare Barke roots... 293 2e-077
gb|CA030609.1|CA030609 HX07J05r HX Hordeum vulgare subsp. v... 293 2e-077
gb|CA030647.1|CA030647 HX07L05r HX Hordeum vulgare subsp. v... 293 2e-077
gb|AV926208.1|AV926208 AV926208 K. Sato unpublished cDNA li... 291 9e-077
gb|BI779022.2|BI779022 EBro01_SQ002_J19_R root, 3 week, hyd... 291 9e-077
gb|BI960696.1|BI960696 HVSMEn0025O11f Hordeum vulgare rachi... 281 8e-074
gb|AV930365.1|AV930365 AV930365 K. Sato unpublished cDNA li... 280 3e-073
gb|BJ466285.1|BJ466285 BJ466285 K. Sato unpublished cDNA li... 280 3e-073
gb|AV918572.1|AV918572 AV918572 K. Sato unpublished cDNA li... 278 1e-072
gb|BU984513.1|BU984513 HF04C11r HF Hordeum vulgare subsp. v... 270 3e-070
gb|BU967165.1|BU967165 HB03H16r BC Hordeum vulgare subsp. v... 268 1e-069
gb|CA009005.1|CA009005 HU12N24r HU Hordeum vulgare subsp. v... 262 8e-068
gb|AV920051.1|AV920051 AV920051 K. Sato unpublished cDNA li... 256 5e-066
gb|BI959339.1|BI959339 HVSMEn0019E20f Hordeum vulgare rachi... 250 3e-064
gb|BQ767053.1|BQ767053 EBro08_SQ007_H22_R root, 3 week, dro... 248 1e-063
gb|CA025257.1|CA025257 HZ51J24r HZ Hordeum vulgare subsp. v... 248 1e-063
gb|AV934882.1|AV934882 AV934882 K. Sato unpublished cDNA li... 246 5e-063
gb|BQ660756.1|BQ660756 HI05F03u HI Hordeum vulgare subsp. v... 246 5e-063
gb|BJ453328.1|BJ453328 BJ453328 K. Sato unpublished cDNA li... 244 2e-062
gb|BG417165.1|BG417165 HVSMEk0016J06f Hordeum vulgare testa... 240 3e-061
gb|BQ660846.1|BQ660846 HI05L24u HI Hordeum vulgare subsp. v... 240 3e-061
gb|CA026701.1|CA026701 HZ56L02r HZ Hordeum vulgare subsp. v... 230 3e-058
gb|AV928513.1|AV928513 AV928513 K. Sato unpublished cDNA li... 224 2e-056
gb|AV925770.1|AV925770 AV925770 K. Sato unpublished cDNA li... 220 3e-055
gb|BI958555.1|BI958555 HVSMEn0015J16f Hordeum vulgare rachi... 218 1e-054
gb|AV919198.1|AV919198 AV919198 K. Sato unpublished cDNA li... 216 4e-054
gb|AV923333.1|AV923333 AV923333 K. Sato unpublished cDNA li... 216 4e-054
gb|AV936150.1|AV936150 AV936150 K. Sato unpublished cDNA li... 214 2e-053
gb|BF259974.3|BF259974 HVSMEf0020M07f Hordeum vulgare seedl... 206 4e-051
gb|AV918571.1|AV918571 AV918571 K. Sato unpublished cDNA li... 204 2e-050
gb|BQ766406.1|BQ766406 EBro08_SQ005_L20_R root, 3 week, dro... 198 1e-048
gb|BM370580.2|BM370580 EBro08_SQ004_K11_R root, 3 week, dro... 186 4e-045
gb|BQ467842.1|BQ467842 HR01B16r HR Hordeum vulgare subsp. v... 182 6e-044
gb|BE411751.1|BE411751 ISC008.H06F990806 ITEC ISC Barley Le... 180 2e-043
gb|CB875240.1|CB875240 HX07L05w HX Hordeum vulgare subsp. v... 180 2e-043
gb|CB875201.1|CB875201 HX07J05w HX Hordeum vulgare subsp. v... 178 9e-043
gb|BF064711.2|BF064711 HV_CEb0017G02f Hordeum vulgare seedl... 167 3e-039
gb|BJ460872.1|BJ460872 BJ460872 K. Sato unpublished cDNA li... 163 5e-038
gb|BU985115.1|BU985115 HF06C19r HF Hordeum vulgare subsp. v... 163 5e-038
gb|BG368285.2|BG368285 HVSMEi0017H01f Hordeum vulgare 20 DA... 159 8e-037
gb|AV929091.1|AV929091 AV929091 K. Sato unpublished cDNA li... 159 8e-037
gb|BE411894.1|BE411894 ISC010.D05F990917 ITEC ISC Barley Le... 157 3e-036
gb|BJ468308.1|BJ468308 BJ468308 K. Sato unpublished cDNA li... 157 3e-036
gb|CA017356.1|CA017356 HV12L21u HV Hordeum vulgare subsp. v... 153 5e-035
gb|BJ447699.1|BJ447699 BJ447699 K. Sato unpublished cDNA li... 151 2e-034
gb|BJ455449.1|BJ455449 BJ455449 K. Sato unpublished cDNA li... 151 2e-034
gb|BU994416.1|BU994416 HM07A02r HM Hordeum vulgare subsp. v... 151 2e-034
gb|CA019440.1|CA019440 HV11P23r HV Hordeum vulgare subsp. v... 151 2e-034
gb|BG343763.2|BG343763 HVSMEg0006L01f Hordeum vulgare pre-a... 149 8e-034
gb|BF258638.2|BF258638 HVSMEf0016E13f Hordeum vulgare seedl... 145 1e-032
gb|BE060794.1|BE060794 HVSMEg0013G05f Hordeum vulgare pre-a... 143 5e-032
gb|BQ469740.1|BQ469740 HZ01L16r HZ Hordeum vulgare subsp. v... 143 5e-032
gb|BQ663566.1|BQ663566 HU03C22u HU Hordeum vulgare subsp. v... 133 5e-029
gb|BU972673.1|BU972673 HB22G06r BC Hordeum vulgare subsp. v... 129 7e-028
gb|CA017986.1|CA017986 HV07A23r HV Hordeum vulgare subsp. v... 129 7e-028
gb|BM376392.2|BM376392 EBem05_SQ002_B14_R embryo, 14 DPA, n... 123 5e-026
gb|AL499724.1|AL499724 AL499724 Hordeum vulgare Barke etiol... 119 7e-025
gb|AV836573.1|AV836573 AV836573 K. Sato unpublished cDNA li... 117 3e-024
gb|BG300950.1|BG300950 HVSMEb0019A22f Hordeum vulgare seedl... 117 3e-024
gb|BI949437.1|BI949437 HVSMEl0013O09f Hordeum vulgare spike... 117 3e-024
gb|BI955734.1|BI955734 HVSMEm0024E12f Hordeum vulgare green... 117 3e-024
gb|AV917031.1|AV917031 AV917031 K. Sato unpublished cDNA li... 117 3e-024
gb|AJ462437.1|AJ462437 AJ462437 S00002 Hordeum vulgare subs... 117 3e-024
gb|BU971759.1|BU971759 HB19J12r BC Hordeum vulgare subsp. v... 117 3e-024
gb|CA025840.1|CA025840 HZ53E19r HZ Hordeum vulgare subsp. v... 117 3e-024
gb|AL503528.1|AL503528 AL503528 Hordeum vulgare Barke roots... 115 1e-023
gb|BF258768.2|BF258768 HVSMEf0016K01f Hordeum vulgare seedl... 115 1e-023
gb|BI779535.2|BI779535 EBro01_SQ004_F12_R root, 3 week, hyd... 115 1e-023
gb|AL503049.1|AL503049 AL503049 Hordeum vulgare Barke roots... 113 4e-023
gb|BF260649.2|BF260649 HVSMEf0022J05f Hordeum vulgare seedl... 113 4e-023
gb|CA011082.1|CA011082 HT07B01u HT Hordeum vulgare subsp. v... 113 4e-023
gb|CA015150.1|CA015150 HT13H01r HT Hordeum vulgare subsp. v... 113 4e-023
gb|CA015920.1|CA015920 HV11G20u HV Hordeum vulgare subsp. v... 113 4e-023
gb|CB882157.1|CB882157 HL01A17w HL Hordeum vulgare subsp. v... 113 4e-023
gb|CA031178.1|CA031178 HX09D18r HX Hordeum vulgare subsp. v... 109 7e-022
gb|AV923841.1|AV923841 AV923841 K. Sato unpublished cDNA li... 103 4e-020
gb|BQ468970.1|BQ468970 HM02P11r HM Hordeum vulgare subsp. v... 103 4e-020
gb|BG343963.1|BG343963 HVSMEg0007D23f Hordeum vulgare pre-a... 101 2e-019
gb|BI948889.1|BI948889 HVSMEl0011E15f Hordeum vulgare spike... 101 2e-019
gb|AV927219.1|AV927219 AV927219 K. Sato unpublished cDNA li... 101 2e-019
gb|AL505671.1|AL505671 AL505671 Hordeum vulgare Barke roots... 98 3e-018
gb|BI958142.1|BI958142 HVSMEn0013J15f Hordeum vulgare rachi... 94 4e-017
gb|BJ447591.1|BJ447591 BJ447591 K. Sato unpublished cDNA li... 94 4e-017
gb|AV923682.1|AV923682 AV923682 K. Sato unpublished cDNA li... 92 2e-016
gb|AL501744.1|AL501744 AL501744 Hordeum vulgare Barke roots... 90 6e-016
gb|BQ464910.1|BQ464910 HU02B19r HU Hordeum vulgare subsp. v... 90 6e-016
gb|AL505797.1|AL505797 AL505797 Hordeum vulgare Barke roots... 86 1e-014
gb|BI956476.1|BI956476 HVSMEn0003J21f Hordeum vulgare rachi... 86 1e-014
gb|BF263370.1|BF263370 HV_CEa0006J03f Hordeum vulgare seedl... 86 1e-014
gb|BE214667.2|BE214667 HV_CEb0004C10f Hordeum vulgare seedl... 86 1e-014
gb|BQ463453.1|BQ463453 HI05F03r HI Hordeum vulgare subsp. v... 86 1e-014
gb|BQ472793.1|BQ472793 HB01H14r BC Hordeum vulgare subsp. v... 86 1e-014
gb|BF253907.1|BF253907 HVSMEf0002H08f Hordeum vulgare seedl... 84 4e-014
gb|BQ765797.1|BQ765797 EBro03_SQ008_O01_R root, 3 week, wat... 84 4e-014
gb|BI956663.1|BI956663 HVSMEn0004K08f Hordeum vulgare rachi... 80 6e-013
gb|BG299430.2|BG299430 HVSMEa0019P14f Hordeum vulgare seedl... 78 2e-012
gb|BI948539.1|BI948539 HVSMEl0010A07f Hordeum vulgare spike... 78 2e-012
gb|BM442942.2|BM442942 EBro02_SQ001_P12_R root, 3 week, hyd... 76 1e-011
gb|BQ760759.1|BQ760759 EBro03_SQ003_G08_R root, 3 week, wat... 76 1e-011
gb|BE060456.3|BE060456 HVSMEg0012F17f Hordeum vulgare pre-a... 72 1e-010
gb|BU996532.1|BU996532 HM13O16r HM Hordeum vulgare subsp. v... 72 1e-010
gb|BF628750.2|BF628750 HVSMEb0007M11f Hordeum vulgare seedl... 70 6e-010
gb|CA020497.1|CA020497 HZ36H21r HZ Hordeum vulgare subsp. v... 70 6e-010
gb|BQ465804.1|BQ465804 HU04L18r HU Hordeum vulgare subsp. v... 68 2e-009
gb|BQ768380.1|BQ768380 EBro08_SQ011_E16_R root, 3 week, dro... 68 2e-009
gb|CA024787.1|CA024787 HZ50E24r HZ Hordeum vulgare subsp. v... 68 2e-009
gb|BQ661318.1|BQ661318 HM02P11u HM Hordeum vulgare subsp. v... 66 9e-009
gb|AL500926.1|AL500926 AL500926 Hordeum vulgare Barke roots... 64 4e-008
gb|BI959331.1|BI959331 HVSMEn0019E12f Hordeum vulgare rachi... 64 4e-008
gb|BQ469182.1|BQ469182 HM03K08r HM Hordeum vulgare subsp. v... 64 4e-008
gb|BI956576.1|BI956576 HVSMEn0004D17f Hordeum vulgare rachi... 62 1e-007
gb|BQ754945.1|BQ754945 EBed02_SQ003_E09_R endosperm, 8 DPA,... 60 6e-007
gb|BM372877.2|BM372877 EBma04_SQ002_E01_R maternal, 10 DPA,... 58 2e-006
gb|BE216853.1|BE216853 HV_CEb0011N06f Hordeum vulgare seedl... 56 9e-006
gb|BM368747.1|BM368747 EBem08_SQ004_H23_R embryo, 40 DPA, n... 56 9e-006
gb|AV836384.1|AV836384 AV836384 K. Sato unpublished cDNA li... 54 4e-005
gb|BI957138.1|BI957138 HVSMEn0007L07f Hordeum vulgare rachi... 54 4e-005
gb|BF259601.3|BF259601 HVSMEf0019M06f Hordeum vulgare seedl... 52 1e-004
gb|BQ465393.1|BQ465393 HU03I04r HU Hordeum vulgare subsp. v... 52 1e-004
gb|BF631398.2|BF631398 HVSMEb0015N06f Hordeum vulgare seedl... 50 5e-004
gb|AV930581.1|AV930581 AV930581 K. Sato unpublished cDNA li... 50 5e-004
gb|BG366351.1|BG366351 HVSMEi0006M09f Hordeum vulgare 20 DA... 48 0.002
gb|BQ469880.1|BQ469880 HX01C05T HX Hordeum vulgare subsp. v... 48 0.002
gb|BQ661800.1|BQ661800 HP01F17w HP Hordeum vulgare subsp. v... 48 0.002
gb|BG365821.2|BG365821 HVSMEi0004F18f Hordeum vulgare 20 DA... 46 0.009
gb|BM817226.1|BM817226 HC109A10_T3.ab1 HC Hordeum vulgare s... 46 0.009
gb|BU996252.1|BU996252 HM13A10r HM Hordeum vulgare subsp. v... 46 0.009
>gb|BF624748.2|BF624748 HVSMEa0017K05f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0017K05f, mRNA sequence
Length = 750
Score = 714 bits (360), Expect = 0.0
Identities = 635/725 (87%), Gaps = 4/725 (0%)
Strand = Plus / Minus
Query: 1349 tcatttgagacataagaagtgatttctcgtcgtcaaatccagcgccttcaactccctcct 1408
||||||||||||| |||| | ||||||| || ||||| ||||| |||||||| ||||| |
Sbjct: 729 tcatttgagacatgagaatt-atttctcatcatcaaacccagcaccttcaacgccctctt 671
Query: 1409 ctatatcttcaaggttgaatactggcacagaactgtccacatgcttctgcgacttcttct 1468
|||| |||||||| ||||| ||||| ||||||||||| |||||||| | ||||| ||||
Sbjct: 670 ctatgtcttcaagattgaacactggaacagaactgtcgacatgcttgtttgactttttct 611
Query: 1469 tgtccgagccc---ttctttgatttgcttgccttcttcctaccgccacatagtgatgaca 1525
| || |||| | |||||||| ||||||||||||||| | || ||||| ||||||| ||
Sbjct: 610 tatctgagctccttttctttgacttgcttgccttcttcttgcccccacacagtgatgcca 551
Query: 1526 agaaaccacccttcttctgcttaattgggggctcataaccatatagagctgttcggttga 1585
|||||| ||||||| |||||| ||||| ||||||||||| | ||| |||| |||||
Sbjct: 550 agaaacttggcttcttcgccttaatcgggggttcataaccatagatagccgttctgttga 491
Query: 1586 aaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaagttaa 1645
||||||| |||||||| ||||||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 490 aaacacaaccagttcccacataaactggcccttgaatgccatcaaggcccctcaagttaa 431
Query: 1646 taccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcgaatc 1705
|| | ||||| || ||||||||||| ||||||||||||||||| ||||| ||||| || |
Sbjct: 430 tatcaaaaaagacagtgttcctgttcgcatatcgatcattcctatcaataccatcaaacc 371
Query: 1706 tctggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaagcaca 1765
|||| || ||||| || || ||||| | |||||||| || ||||| ||||||||||
Sbjct: 370 tctgtgggaactgcacataacagacttgcggacctaggtttggatccattaggaagcaca 311
Query: 1766 tagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaacatgt 1825
||||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 310 tagcttcccggacagccttgctgttgttgatgtagtgatcacaatcaagattcaacatgt 251
Query: 1826 attgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagctttct 1885
|||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||||
Sbjct: 250 attgtccattagtaaggacagccgagacacgaacaagggcattcatggcaccagccttct 191
Query: 1886 tgtgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcat 1945
|||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 190 tgtggtgctggaatccaggacgcttttcacgagacacatagaccaaacgggggagctcat 131
Query: 1946 tgccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggt 2005
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 130 taccctcggtatcaaggccaccactgtgaccaaggaaaacctgaatcattccagggtgat 71
Query: 2006 cccnggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaa 2065
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 70 ccctggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcgggga 11
Query: 2066 ctttc 2070
|||||
Sbjct: 10 ctttc 6
>gb|BQ468579.1|BQ468579 HM01K12T HM Hordeum vulgare subsp. vulgare cDNA clone HM01K12
5-PRIME, mRNA sequence
Length = 676
Score = 708 bits (357), Expect = 0.0
Identities = 590/668 (88%), Gaps = 6/668 (0%)
Strand = Plus / Minus
Query: 2750 ccatgttgtaatcagttgatgcatcaatatcaccaacaccccgaccctcagagggagcaa 2809
|||||||||| ||||| |||||||| || ||| | | ||||||| |||||||||||||
Sbjct: 676 ccatgttgtattcagtagatgcatcgatgtcagtagctgcccgaccttcagagggagcaa 617
Query: 2810 tgcttgtgccattcgtcatgggaatcgtccccttgtcctgcttcattttccagccatcaa 2869
||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 616 tgcttgtgccattagtcatgggaattgcacccttgtcctgcttcattttccagccatcaa 557
Query: 2870 ccctctctttccaggcaacattcccaatgctaccagagaactcccttgacggatttggcg 2929
| ||||||||||| |||||||||||||| || |||||||||||||||||||||||||| |
Sbjct: 556 ctctctctttccaagcaacattcccaatactgccagagaactcccttgacggatttggtg 497
Query: 2930 aatggttcacatagggaaatggagcacgcttgccaatgttcccagttggggacatcatat 2989
|||| ||||| ||||| || |||||||| ||| ||||||||||| |||||||||||||
Sbjct: 496 aatgattcacgtaggggaacggagcacgtctgctgatgttcccagtaggggacatcatat 437
Query: 2990 gatggtcaggggaagcaccagggatttctcctgagatctggctgttagtgactgatggga 3049
|||| ||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||
Sbjct: 436 gatgatcaggggaagctccagggatttctcttgacatctggctgttagtgactgaaggga 377
Query: 3050 tgtatccccgaggaatctcgccactgtcatacttggtaagcccgatctcgccactgtcat 3109
|||||||| ||| ||||| |||||||| ||||||| ||||||||||||||||||||||
Sbjct: 376 cgtatcccctagggatctctccactgtcgtacttggagagcccgatctcgccactgtcat 317
Query: 3110 acttggggcgaccaacatccccgctgcccccaacgttcatgcgccagctgcgcattctgt 3169
|||||||| | ||||||| ||| |||||||| ||||||||||||||||||||| || |
Sbjct: 316 acttggggtggccaacattcccactgcccccggtgttcatgcgccagctgcgcatcctat 257
Query: 3170 cggcaatcttctgcttctggtcctcattgccagatgcaaggtaattgaagtcgct----- 3224
| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 256 cagcaatcttctgcttctggtcctcagtgccagatgcagggtagttgaagtcactgccat 197
Query: 3225 -atcggcatcagtgtcgtctccttcctccccacggatcgccgggctccccttgtggcgct 3283
|||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||
Sbjct: 196 catcggcatcagtgtcgtcgccttcctccccgcggatcgctgggctccctttgtggcgct 137
Query: 3284 tgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcgtagc 3343
|||||||||||||||||||| |||| ||||| ||||| ||||||||||||| ||||||||
Sbjct: 136 tgtacttggtcttgcactggaggcaggcctgggtgccctccttgcgctcgtgctcgtagc 77
Query: 3344 aggggcggcacaccggaaacccgcagacgtcgcaggcggcgaagacgtccccctccgccg 3403
|||||||||| ||||| || | ||||||||||||||||| |||||| || || ||| |||
Sbjct: 76 aggggcggcagaccgggaagcggcagacgtcgcaggcggtgaagacctcgccgtccaccg 17
Query: 3404 tggtgccc 3411
||||||||
Sbjct: 16 tggtgccc 9
>gb|CB882206.1|CB882206 HL01D01w HL Hordeum vulgare subsp. vulgare cDNA clone HL01D01
3-PRIME, mRNA sequence
Length = 700
Score = 688 bits (347), Expect = 0.0
Identities = 617/702 (87%), Gaps = 5/702 (0%)
Strand = Plus / Minus
Query: 2310 atcagatacatagcaagagaccttatccacagggtaatccacagcaagaatggatagcac 2369
|||||||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||
Sbjct: 700 atcagatacatagcaagagaccttgtccacgggataatcaacagcaagaatggatagcac 641
Query: 2370 ggtattggcagtgacaagaggaggctccttcattgggtcgactgtactgacgaaaatgtc 2429
||| ||||||||||| | ||| |||||||||| |||||||||||||||||||| |||||
Sbjct: 640 ggtgttggcagtgacgataggtggctccttcaaggggtcgactgtactgacgaatatgtc 581
Query: 2430 aacagcagccaactgagatggctcaccttcccggtcataccttaatgccagcctatcaag 2489
|||||||||||||||||| || |||||||| |||||||||||||| ||||| ||||||||
Sbjct: 580 aacagcagccaactgagagggttcaccttctcggtcataccttaaagccagtctatcaag 521
Query: 2490 gtacgtctcccggttgattggaaaccacttagggaactgatccaatatccacgaaagagc 2549
||| |||||||||||||||||||||||||| ||||||||||||| |||||| || | |||
Sbjct: 520 gtaggtctcccggttgattggaaaccacttcgggaactgatccagtatccaggataaagc 461
Query: 2550 aaaccagatctcacatataacagatagaagccataatgggtatgcattgcgcacaggatt 2609
|||||| ||||||||||||||||||| |||||| | ||||||||||| |||||||||||
Sbjct: 460 aaaccaaatctcacatataacagataaaagccacagcgggtatgcattacgcacaggatt 401
Query: 2610 tgtgatacggtagtgcaagaagatgcttagaacaatcaatcgcagcacaatgaccatcct 2669
||||| ||||||||||| ||||||||||||||||| ||| ||||| ||||||||||| ||
Sbjct: 400 tgtgagacggtagtgcaggaagatgcttagaacaaccaaccgcagaacaatgaccattct 341
Query: 2670 gtatggatttatcctggaggaaggaagtggaactttcctagatagaggctgtcgagtttc 2729
||| |||||||| |||| |||| || || || || |||||||||||||| ||||||||
Sbjct: 340 gtacggatttattttggatgaagcaatggggacctttctagatagaggctggcgagtttc 281
Query: 2730 gtcgttcaataaggcatcttccatgttgtaatcagttgatgcatcaatatcaccaacacc 2789
|| |||| ||| || |||||||||||||| ||||| |||||||| || ||| | | |
Sbjct: 280 atcattcagtaaagcgtcttccatgttgtattcagtagatgcatcgatgtcagtagctgc 221
Query: 2790 ccgaccctcagagggagcaatgcttgtgccattcgtcatgggaatcgtccccttgtcctg 2849
|||||| |||||||||||||||||||||||||| ||||||||||| | |||||||||||
Sbjct: 220 ccgaccttcagagggagcaatgcttgtgccattagtcatgggaattgcacccttgtcctg 161
Query: 2850 cttcattttccagccatcaaccctctctttccaggcaacattcccaatgctaccagagaa 2909
||||||||||||||||||||| ||||||||||| |||||||||||||| || |||||| |
Sbjct: 160 cttcattttccagccatcaactctctctttccaagcaacattcccaatactgccagag-a 102
Query: 2910 ctcccttgacggatttggcgaatggttcacatagggaaatggagcacgcttgccaatgtt 2969
|||| ||||||| |||| ||||| ||||| ||||| | |||||||| ||| |||||
Sbjct: 101 ctcc--tgacgga-ttggtgaatgattcacgtaggg-gacggagcacgtctgctgatgtt 46
Query: 2970 cccagttggggacatcatatgatggtcaggggaagcaccagg 3011
|||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 45 cccagtaggggacatcatatgatgatcaggggaagctccagg 4
>gb|BU999035.1|BU999035 HI12P13r HI Hordeum vulgare subsp. vulgare cDNA clone HI12P13
5-PRIME, mRNA sequence
Length = 656
Score = 654 bits (330), Expect = 0.0
Identities = 552/625 (88%), Gaps = 1/625 (0%)
Strand = Plus / Minus
Query: 1733 tccttcctaggttagggtccataaggaagcacatagcttccctgagagccttactgttgt 1792
|||||||||| |||||||||||||| ||||||||||| || || ||||| | || ||||
Sbjct: 634 tccttcctagattagggtccataagaaagcacatagcctctcttagagcgctgctattgt 575
Query: 1793 taatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgaga 1852
| |||||||||||||||||||||||||||||||| || ||||| ||||| |||||||| |
Sbjct: 574 tgatgtagtgatcacaatcaagattcaacatgtactgcccattagtaaggacagctgata 515
Query: 1853 cacgaacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgctttt 1912
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct: 514 cacgaacaagtgcattcatggcaccagctttcttgtggtgctggaatccaggacgtttct 455
Query: 1913 cacgagaaacatagaccaaacggggtagctcattgccctcagtatcaaggccaccactgt 1972
||||||| ||||| |||||||| || ||||||||||| |||||||| ||||| ||||| |
Sbjct: 454 cacgagacacataaaccaaacgaggaagctcattgccatcagtatcgaggcctccactat 395
Query: 1973 gaccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggccatggtg 2032
|||||||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||
Sbjct: 394 gaccaaggaaaacctgaagcattccaggatggtccctagtattgttcccaggccaaggtg 335
Query: 2033 tgccatcttgcatgatccatccttcctcaggaactttctgtgccttagcaacaaggccat 2092
|||| |||||||||||||||||||||||||||||||||| || || || ||||||| ||
Sbjct: 334 tgccgtcttgcatgatccatccttcctcaggaactttctcggctttggctacaaggctat 275
Query: 2093 ttaccctaactttgaattcttcatattctctcttcatggcccggcggtctttaacaaatg 2152
| || | ||||||||| ||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 274 taacgcgaactttgaactcttcatattctctcttcatggctcgacggtctttaacgaatg 215
Query: 2153 aagggtgcactttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctc 2212
||| || |||||||| |||||| ||||||||||||| | |||||||| || || ||||
Sbjct: 214 aagtctgaactttgtctttcaagaaatcaattttctgagcaaagtaccactctggtgctc 155
Query: 2213 taggttcaatgttgtacttcttaacaaatggtacccattttctagcaaactctgaagtct 2272
| ||||| ||||| ||||| ||| ||| |||||||||||||||||||||||||||||||
Sbjct: 154 tgggttctatgttatactttttacaaaacggtacccattttctagcaaactctgaagtct 95
Query: 2273 cagctagtgcatcaaatgtcagcatcgcagctccatcatcagatacatagcaagagacct 2332
|||| ||||||||||| || ||||||||||||||||||||||||||||||||||| | ||
Sbjct: 94 cagcaagtgcatcaaaggtaagcatcgcagctccatcatcagatacatagcaagata-ct 36
Query: 2333 tatccacagggtaatccacagcaag 2357
| || |||||||| |||||||||||
Sbjct: 35 tgtcaacagggtagtccacagcaag 11
>gb|BI956967.1|BI956967 HVSMEn0006I08f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0006I08f,
mRNA sequence
Length = 898
Score = 648 bits (327), Expect = 0.0
Identities = 487/538 (90%), Gaps = 2/538 (0%)
Strand = Plus / Minus
Query: 1866 attcatggcaccagctttcttgtgatgctggaatccaggacgctttt-cacgagaaacat 1924
||||||||||||||| |||||||| |||||||||||||| |||||| ||||||| ||||
Sbjct: 540 attcatggcaccagccttcttgtggggctggaatccaggaggctttttcacgagacacat 481
Query: 1925 agaccaaacggggtagctcattgccctcagtatcaaggccacc-actgtgaccaaggaaa 1983
||||||||||||| |||||||| |||| |||||||||||||| ||||||||||||||||
Sbjct: 480 agaccaaacgggggagctcattacccttggtatcaaggccacccactgtgaccaaggaaa 421
Query: 1984 acctgaatcattccaggatggtcccnggtattgtttcctggccatggtgtgccatcttgc 2043
||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||
Sbjct: 420 acctgaatcattccagggtgatccctggtattgtttcctggccatggtgtgccatcttgc 361
Query: 2044 atgatccatccttcctcaggaactttctgtgccttagcaacaaggccatttaccctaact 2103
||||||||||||||||| || |||||| |||||||| ||| |||||||||| ||||| |
Sbjct: 360 atgatccatccttcctcggggactttcaatgccttagaaactaggccatttatcctaatt 301
Query: 2104 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2163
|| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 300 ttaaattcttcatattctctcttcatggcccggcggtctttaacaaatgaaggctggact 241
Query: 2164 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2223
||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||
Sbjct: 240 ttgtctttcaagtaatcaattttctgagagaagtaccactcaggagctctgggttcgatg 181
Query: 2224 ttgtacttcttaacaaatggtacccattttctagcaaactctgaagtctcagctagtgca 2283
| ||||||||||||||||||||||| || ||||||||||||||||||||||| | |||
Sbjct: 180 tcatacttcttaacaaatggtacccacttcctagcaaactctgaagtctcagccaatgcg 121
Query: 2284 tcaaatgtcagcatcgcagctccatcatcagatacatagcaagagaccttatccacaggg 2343
||||| || ||||| | ||||| |||||||||||||||||||||||||| ||||| ||
Sbjct: 120 tcaaaagtgagcattgatgctccgtcatcagatacatagcaagagaccttgtccacggga 61
Query: 2344 taatccacagcaagaatggatagcacggtattggcagtgacaagaggaggctccttca 2401
|||||| |||||||||||||||||||||| ||||||||||| | ||| ||||||||||
Sbjct: 60 taatccccagcaagaatggatagcacggtgttggcagtgacgataggtggctccttca 3
>gb|CK124710.1|CK124710 BES1824110c01 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C0110 5-PRIME, mRNA sequence
Length = 710
Score = 630 bits (318), Expect = e-179
Identities = 524/592 (88%), Gaps = 1/592 (0%)
Strand = Plus / Minus
Query: 1480 ttctttgatttgcttgccttcttcct-accgccacatagtgatgacaagaaaccaccctt 1538
|||||||| ||||||||||||||| | || ||||| ||||||| |||||||| |||
Sbjct: 600 ttctttgacttgcttgccttcttcttgncccccacacagtgatgccaagaaacttggctt 541
Query: 1539 cttctgcttaattgggggctcataaccatatagagctgttcggttgaaaacacagccagt 1598
|||| |||||| ||||| ||||||||||| | ||| |||| |||||||||||| |||||
Sbjct: 540 cttcgccttaatcgggggttcataaccatagatagccgttctgttgaaaacacaaccagt 481
Query: 1599 tccgacataaactggtccttggatgccatcaagacctctcaagttaataccgaaaaacac 1658
| | ||||||||||| ||||| ||||||||||| || |||||||||||| | ||||| ||
Sbjct: 480 ttccacataaactggcccttgaatgccatcaaggcccctcaagttaatatcaaaaaagac 421
Query: 1659 ggtgttcctgttggcatatcgatcattcctgtcaatgccatcgaatctctggggaaactg 1718
||||||||||| ||||||||||||||||| ||||| ||||| || ||||| || |||||
Sbjct: 420 agtgttcctgttcgcatatcgatcattcctatcaataccatcaaacctctgtgggaactg 361
Query: 1719 aacgtagcagacactccttcctaggttagggtccataaggaagcacatagcttccctgag 1778
|| || ||||| | |||||||| || ||||| ||||||||||||||||||| ||
Sbjct: 360 cacataacagacttgcggacctaggtttggatccattaggaagcacatagcttcccggac 301
Query: 1779 agccttactgttgttaatgtagtgatcacaatcaagattcaacatgtattgtccattggt 1838
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 300 agccttgctgttgttgatgtagtgatcacaatcaagattcaacatgtattgtccattagt 241
Query: 1839 aagcacagctgagacacgaacaagagcattcatggcaccagctttcttgtgatgctggaa 1898
||| ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 240 aaggacagccgagacacgaacaagggcattcatggcaccagccttcttgtggtgctggaa 181
Query: 1899 tccaggacgcttttcacgagaaacatagaccaaacggggtagctcattgccctcagtatc 1958
||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 180 tccaggacgcttttcacgagacacatagaccaaacgggggagctcattaccctcggtatc 121
Query: 1959 aaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtcccnggtattgtt 2018
|||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||
Sbjct: 120 aaggccaccactgtgaccaaggaaaacctgaatcattccagggtgatccctggtattgtt 61
Query: 2019 tcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttc 2070
|||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 60 tcctggccatggtgtgccatcttgcatgatccatccttcctcggggactttc 9
>gb|BQ471177.1|BQ471177 HV01F24T HV Hordeum vulgare subsp. vulgare cDNA clone HV01F24
5-PRIME, mRNA sequence
Length = 625
Score = 626 bits (316), Expect = e-177
Identities = 538/612 (87%)
Strand = Plus / Minus
Query: 2516 acttagggaactgatccaatatccacgaaagagcaaaccagatctcacatataacagata 2575
|||| ||||||||||||| |||||| || | ||||||||| |||||||||||||||||||
Sbjct: 625 acttcgggaactgatccagtatccaggataaagcaaaccaaatctcacatataacagata 566
Query: 2576 gaagccataatgggtatgcattgcgcacaggatttgtgatacggtagtgcaagaagatgc 2635
|||||| | ||||||||||| |||||||||||||||| ||||||||||| ||||||||
Sbjct: 565 aaagccacagcgggtatgcattacgcacaggatttgtgagacggtagtgcaggaagatgc 506
Query: 2636 ttagaacaatcaatcgcagcacaatgaccatcctgtatggatttatcctggaggaaggaa 2695
||||||||| ||| ||||| ||||||||||| ||||| |||||||| |||| |||| ||
Sbjct: 505 ttagaacaaccaaccgcagaacaatgaccattctgtacggatttattttggatgaagcaa 446
Query: 2696 gtggaactttcctagatagaggctgtcgagtttcgtcgttcaataaggcatcttccatgt 2755
|| || || |||||||||||||| |||||||| || |||| ||| || ||||||||||
Sbjct: 445 tggggacctttctagatagaggctggcgagtttcatcattcagtaaagcgtcttccatgt 386
Query: 2756 tgtaatcagttgatgcatcaatatcaccaacaccccgaccctcagagggagcaatgcttg 2815
|||| ||||| |||||||| || ||| | | ||||||| |||||||||||||||||||
Sbjct: 385 tgtattcagtagatgcatcgatgtcagtagctgcccgaccttcagagggagcaatgcttg 326
Query: 2816 tgccattcgtcatgggaatcgtccccttgtcctgcttcattttccagccatcaaccctct 2875
||||||| ||||||||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct: 325 tgccattagtcatgggaattgcacccttgtcctgcttcattttccagccatcaactctct 266
Query: 2876 ctttccaggcaacattcccaatgctaccagagaactcccttgacggatttggcgaatggt 2935
||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||| |
Sbjct: 265 ctttccaagcaacattcccaatactgccagagaactcccttgacggatttggtgaatgat 206
Query: 2936 tcacatagggaaatggagcacgcttgccaatgttcccagttggggacatcatatgatggt 2995
|||| ||||| || |||||||| ||| ||||||||||| ||||||||||||||||| |
Sbjct: 205 tcacgtaggggaacggagcacgtctgctgatgttcccagtaggggacatcatatgatgat 146
Query: 2996 caggggaagcaccagggatttctcctgagatctggctgttagtgactgatgggatgtatc 3055
|||||||||| ||||||||||||||||| |||||||||||||||||||| |||| |||||
Sbjct: 145 caggggaagctccagggatttctcctgacatctggctgttagtgactgaagggacgtatc 86
Query: 3056 cccgaggaatctcgccactgtcatacttggtaagcccgatctcgccactgtcatacttgg 3115
||| ||| ||||| |||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 85 ccctagggatctctccactgtcgtacttggagagcccgatctcgccactgtcatacttgg 26
Query: 3116 ggcgaccaacat 3127
|| | |||||||
Sbjct: 25 ggtggccaacat 14
>gb|BG368813.1|BG368813 HVSMEi0020M13f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0020M13f, mRNA sequence
Length = 870
Score = 617 bits (311), Expect = e-174
Identities = 675/791 (85%), Gaps = 7/791 (0%)
Strand = Plus / Minus
Query: 1022 acccaagagcccaccggagcacctggttcagacggtccgaaagattgatgggggcagacc 1081
|||||||||||| | | ||||| ||||||||||| | |||||||||||||||||||| |
Sbjct: 789 acccaagagcccccggaagcacttggttcagacgatttgaaagattgatgggggcagatc 730
Query: 1082 ccttgaaagctggccgcttg-ggcatgcagtagatcgacc-gccagcctcgcgcgtgcat 1139
|||||||||||||| |||| |||||||| |||| |||| ||||||||| |||||| |
Sbjct: 729 ccttgaaagctggc-gcttaaggcatgcaatagactgacccgccagcctcttgcgtgctt 671
Query: 1140 cttgaatccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctcagttcc 1199
||||||||| |||||||| |||||||| ||||| || || ||||| || |||||||||||
Sbjct: 670 cttgaatccagtgagaatatcttctgtgacagatccataaatccaaccaatctcagttcc 611
Query: 1200 ccattcagtcttgtcctcatagccacagcttataacatggatagcttctttcagaagaga 1259
||| |||| |||||| ||||||||||| |||| |||||||||||||||| || ||||||
Sbjct: 610 ccactcagacttgtcntcatagccacacnttatgacatggatagcttctt-caaaagaga 552
Query: 1260 ctccggagttgcggactgaggaacaccaccatactccatcagagtggaggcaacaaacgc 1319
|| ||||| | ||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 551 ttctggagtggaggactgaggaacaccaccatattccatcagagtggaggcaacaaatgc 492
Query: 1320 tgcggactggccaaatctcttctccaggctcatttgagacataagaagtgatttctcgtc 1379
||| |||||||||||||||||||| | ||||||||||||||| |||| ||||||||| ||
Sbjct: 491 tgctgactggccaaatctcttctctaagctcatttgagacatgagaactgatttctcatc 432
Query: 1380 gtcaaatccagcgccttcaactccctcctctatatcttcaaggttgaatactggcacaga 1439
||||| ||||| |||||||| ||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 431 atcaaacccagcaccttcaacaccctcctctatgtcttcaagattgaacactggaacaga 372
Query: 1440 actgtccacatgcttctgcgacttcttcttgtccgagccc---ttctttgatttgcttgc 1496
|||||| |||||||| | ||||| ||||| || |||| | |||||||| ||||||||
Sbjct: 371 actgtcgacatgcttgtttgactttttcttatctgagctccttttctttgacttgcttgc 312
Query: 1497 cttcttcctaccgccacatagtgatgacaagaaaccacccttcttctgcttaattggggg 1556
||||||| | || ||||| ||||||| |||||||| ||||||| |||||| |||||
Sbjct: 311 cttcttcttgcccccacacagtgatgccaagaaacttggcttcttcgccttaatcggggg 252
Query: 1557 ctcataaccatatagagctgttcggttgaaaacacagccagttccgacataaactggtcc 1616
||||||||||| | ||| |||| |||||||||||| |||||||| ||||||||||| ||
Sbjct: 251 ttcataaccatagatagccgttctgttgaaaacacaaccagttcccacataaactggccc 192
Query: 1617 ttggatgccatcaagacctctcaagttaataccgaaaaacacggtgttcctgttggcata 1676
||| ||||||||||| || |||||||||||| | ||||| || ||||||||||| |||||
Sbjct: 191 ttgaatgccatcaaggcccctcaagttaatatcaaaaaagacagtgttcctgttcgcata 132
Query: 1677 tcgatcattcctgtcaatgccatcgaatctctggggaaactgaacgtagcagacactcct 1736
|||||||||||| ||||| ||||| || ||||| || ||||| || || ||||| |
Sbjct: 131 tcgatcattcctatcaataccatcaaacctctgtgggaactgcacataacagacttgcgg 72
Query: 1737 tcctaggttagggtccataaggaagcacatagcttccctgagagccttactgttgttaat 1796
|||||||| || ||||| ||||||||||||||||||| || |||||| |||||||| ||
Sbjct: 71 acctaggtttggatccattaggaagcacatagcttcccggacagccttgctgttgttgat 12
Query: 1797 gtagtgatcac 1807
|||||||||||
Sbjct: 11 gtagtgatcac 1
>gb|AW982533.3|AW982533 HVSMEg0003I09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003I09f, mRNA sequence
Length = 854
Score = 617 bits (311), Expect = e-174
Identities = 491/550 (89%), Gaps = 1/550 (0%)
Strand = Plus / Minus
Query: 1894 tggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcattgccctca 1953
|||||||||||||| ||||| ||||| |||||| |||| |||| |||||||| || ||
Sbjct: 549 tggaatccaggacg-ttttcccgagacacatagcccaacggggggagctcattaccttcg 491
Query: 1954 gtatcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtcccnggta 2013
|||||||||||||| ||| |||||||||||||||||||||||||| || ||| ||||
Sbjct: 490 gtatcaaggccaccctggtgcccaaggaaaacctgaatcattccagggtgatccttggta 431
Query: 2014 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttctgt 2073
|||||||||||||||||||||||||||||||||||||||| |||||| || |||||| |
Sbjct: 430 ttgtttcctggccatggtgtgccatcttgcatgatccatctttcctcggggactttcaat 371
Query: 2074 gccttagcaacaaggccatttaccctaactttgaattcttcatattctctcttcatggcc 2133
||||||| ||| |||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct: 370 gccttagaaactaggccatttatcctaattttaaattcttcatattctctcttcatggcc 311
Query: 2134 cggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgggag 2193
||||||||||||||||||||||| || |||||||| |||||||||||||||||||| |||
Sbjct: 310 cggcggtctttaacaaatgaaggctggactttgtctttcaagtaatcaattttctgagag 251
Query: 2194 aagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggtacccatttt 2253
|||||||| ||||||||||| ||||| |||| ||||||||||||||||||||||| ||
Sbjct: 250 aagtaccactcaggagctctgggttcgatgtcatacttcttaacaaatggtacccacttc 191
Query: 2254 ctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatcgcagctccatcatca 2313
||||||||||||||||||||||| | ||| ||||| || ||||| | ||||| ||||||
Sbjct: 190 ctagcaaactctgaagtctcagccaatgcgtcaaaagtgagcattgatgctccgtcatca 131
Query: 2314 gatacatagcaagagaccttatccacagggtaatccacagcaagaatggatagcacggta 2373
|||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||
Sbjct: 130 gatacatagcaagagaccttgtccacgggataatcaacagcaagaatggatagcacggtg 71
Query: 2374 ttggcagtgacaagaggaggctccttcattgggtcgactgtactgacgaaaatgtcaaca 2433
||||||||||| | ||| |||||||||| |||||||||||||||||||| |||||||||
Sbjct: 70 ttggcagtgacgataggtggctccttcaaggggtcgactgtactgacgaatatgtcaaca 11
Query: 2434 gcagccaact 2443
||||||||||
Sbjct: 10 gcagccaact 1
>gb|CB883651.1|CB883651 HQ02O03w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02O03
3-PRIME, mRNA sequence
Length = 601
Score = 617 bits (311), Expect = e-174
Identities = 515/583 (88%)
Strand = Plus / Minus
Query: 2476 gccagcctatcaaggtacgtctcccggttgattggaaaccacttagggaactgatccaat 2535
||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 598 gccagtctatcaaggtaggtctcccggttgattggaaaccacttcgggaactgatccagt 539
Query: 2536 atccacgaaagagcaaaccagatctcacatataacagatagaagccataatgggtatgca 2595
||||| || | ||||||||| ||||||||||||||||||| |||||| | |||||||||
Sbjct: 538 atccaggataaagcaaaccaaatctcacatataacagataaaagccacagcgggtatgca 479
Query: 2596 ttgcgcacaggatttgtgatacggtagtgcaagaagatgcttagaacaatcaatcgcagc 2655
|| |||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||
Sbjct: 478 ttacgcacaggatttgtgagacggtagtgcaggaagatgcttagaacaaccaaccgcaga 419
Query: 2656 acaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagataga 2715
||||||||||| ||||| |||||||| |||| |||| || || || || |||||||||
Sbjct: 418 acaatgaccattctgtacggatttattttggatgaagcaatggggacctttctagataga 359
Query: 2716 ggctgtcgagtttcgtcgttcaataaggcatcttccatgttgtaatcagttgatgcatca 2775
||||| |||||||| || |||| ||| || |||||||||||||| ||||| ||||||||
Sbjct: 358 ggctggcgagtttcatcattcagtaaagcgtcttccatgttgtattcagtagatgcatcg 299
Query: 2776 atatcaccaacaccccgaccctcagagggagcaatgcttgtgccattcgtcatgggaatc 2835
|| ||| | | ||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 298 atgtcagtagctgcccgaccttcagagggagcaatgcttgtgccattagtcatgggaatt 239
Query: 2836 gtccccttgtcctgcttcattttccagccatcaaccctctctttccaggcaacattccca 2895
| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 238 gcacccttgtcctgcttcattttccagccatcaactctctctttccaagcaacattccca 179
Query: 2896 atgctaccagagaactcccttgacggatttggcgaatggttcacatagggaaatggagca 2955
|| || |||||||||||||||||||||||||| ||||| ||||| ||||| || ||||||
Sbjct: 178 atactgccagagaactcccttgacggatttggtgaatgattcacgtaggggaacggagca 119
Query: 2956 cgcttgccaatgttcccagttggggacatcatatgatggtcaggggaagcaccagggatt 3015
|| ||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 118 cgtctgctgatgttcccagtaggggacatcatatgatgatcaggggaagctccagggatt 59
Query: 3016 tctcctgagatctggctgttagtgactgatgggatgtatcccc 3058
|||||||| |||||||||||||||||||| |||| ||||||||
Sbjct: 58 tctcctgacatctggctgttagtgactgaagggacgtatcccc 16
>gb|AV836682.1|AV836682 AV836682 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd24c20, mRNA sequence
Length = 505
Score = 591 bits (298), Expect = e-167
Identities = 453/505 (89%)
Strand = Plus / Minus
Query: 1616 cttggatgccatcaagacctctcaagttaataccgaaaaacacggtgttcctgttggcat 1675
|||| ||||||||||| || |||||||||||| | ||||| || ||||||||||| ||||
Sbjct: 505 cttgaatgccatcaaggcccctcaagttaatatcaaaaaagacagtgttcctgttcgcat 446
Query: 1676 atcgatcattcctgtcaatgccatcgaatctctggggaaactgaacgtagcagacactcc 1735
||||||||||||| ||||| ||||| || ||||| || ||||| || || ||||| |
Sbjct: 445 atcgatcattcctatcaataccatcaaacctctgtgggaactgcacataacagacttgcg 386
Query: 1736 ttcctaggttagggtccataaggaagcacatagcttccctgagagccttactgttgttaa 1795
|||||||| || ||||| ||||||||||||||||||| || |||||| |||||||| |
Sbjct: 385 gacctaggtttggatccattaggaagcacatagcttcccggacagccttgctgttgttga 326
Query: 1796 tgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgagacac 1855
|||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct: 325 tgtagtgatcacaatcaagattcaacatgtattgtccattagtaaggacagccgagacac 266
Query: 1856 gaacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgcttttcac 1915
||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 265 gaacaagggcattcatggcaccagccttcttgtggtgctggaatccaggacgcttttcac 206
Query: 1916 gagaaacatagaccaaacggggtagctcattgccctcagtatcaaggccaccactgtgac 1975
|||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 205 gagacacatagaccaaacgggggagctcattaccctcggtatcaaggccaccactgtgac 146
Query: 1976 caaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggccatggtgtgc 2035
||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||
Sbjct: 145 caaggaaaacctgaatcattccagggtgatccctggtattgtttcctggccatggtgtgc 86
Query: 2036 catcttgcatgatccatccttcctcaggaactttctgtgccttagcaacaaggccattta 2095
||||||||||||||||||||||||| || |||||| |||||||| ||| ||||||||||
Sbjct: 85 catcttgcatgatccatccttcctcggggactttcaatgccttagaaactaggccattta 26
Query: 2096 ccctaactttgaattcttcatattc 2120
||||| ||| ||||||||||||||
Sbjct: 25 tcctaattttaaattcttcatattc 1
>gb|AL504419.1|AL504419 AL504419 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05D18V 5', mRNA sequence
Length = 671
Score = 587 bits (296), Expect = e-165
Identities = 576/665 (86%), Gaps = 6/665 (0%)
Strand = Plus / Minus
Query: 943 gcgaatctctcc-aggaacttgagccg-ccctccgtagccgtaccacag-ggggcagtgc 999
|||||||||||| ||||||||||| || ||||| |||||| ||||| | |||||| |||
Sbjct: 671 gcgaatctctcccaggaacttgaggcggccctcggtagccataccataaaggggcaatgc 612
Query: 1000 cggctgaagaggatctccacggacccaagagcccaccggagcacctggttcagacggtcc 1059
|||||||| || || || |||| |||||||||||||||||||| ||||||||||| ||
Sbjct: 611 cggctgaaaagaatttcancggaaccaagagcccaccggagcacttggttcagacgatct 552
Query: 1060 gaaagattgatgggggcagaccccttgaaagctggccgcttgggcatgcagtagatcgac 1119
|||||||||||||||||||| |||||||||||||| ||||| |||||||| |||| |||
Sbjct: 551 gaaagattgatgggggcagatcccttgaaagctgggcgcttaggcatgcaatagactgac 492
Query: 1120 cgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttctgtcacagaaccgtag 1179
|||||||||| ||||||||||||||||| |||||||| |||||||| ||||| || ||
Sbjct: 491 cgccagcctcttgcgtgcatcttgaatccagtgagaatatcttctgtgacagatccataa 432
Query: 1180 atccacccgatctcagttccccattcagtcttgtcctcatagccacagcttataacatgg 1239
||||| || |||||||||||||| |||| |||||||||||||||||| ||||| ||||||
Sbjct: 431 atccaaccaatctcagttccccactcagacttgtcctcatagccacaacttatgacatgg 372
Query: 1240 atagcttctttcagaagagactccggagttgcggactgaggaacaccaccatactccatc 1299
||||||||||||| |||||| || ||||| | ||||||||||||||||||||| ||||||
Sbjct: 371 atagcttctttcaaaagagattctggagtggaggactgaggaacaccaccatattccatc 312
Query: 1300 agagtggaggcaacaaacgctgcggactggccaaatctcttctccaggctcatttgagac 1359
||||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||
Sbjct: 311 agagtggaggcaacaaatgctgctgactggccaaatctcttctctaagctcatttgagac 252
Query: 1360 ataagaagtgatttctcgtcgtcaaatccagcgccttcaactccctcctctatatcttca 1419
|| |||| ||||||||| || ||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 251 atgagaactgatttctcatcatcaaacccagcaccttcaacaccctcctctatgtcttca 192
Query: 1420 aggttgaatactggcacagaactgtccacatgcttctgcgacttcttcttgtccgagccc 1479
|| ||||| ||||| ||||||||||| |||||||| | ||||| ||||| || |||| |
Sbjct: 191 agattgaacactggaacagaactgtcgacatgcttgtttgactttttcttatctgagctc 132
Query: 1480 ---ttctttgatttgcttgccttcttcctaccgccacatagtgatgacaagaaaccaccc 1536
|||||||| ||||||||||||||| | || ||||| ||||||| |||||||| |
Sbjct: 131 cttttctttgacttgcttgccttcttcttgcccccacacagtgatgccaagaaacttggc 72
Query: 1537 ttcttctgcttaattgggggctcataaccatatagagctgttcggttgaaaacacagcca 1596
|||||| |||||| ||||| ||||||||||| | ||| |||| |||||||||||| |||
Sbjct: 71 ttcttcgccttaatcgggggttcataaccatagatagccgttctgttgaaaacacaacca 12
Query: 1597 gttcc 1601
|||||
Sbjct: 11 gttcc 7
>gb|BM816138.1|BM816138 HC109B12_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B12_T3.ab1 similar to (AF200528) cellulose
synthase-4 [Zea mays],(AF200529) cellulose synthase-5
[Zea mays],(AF200533) cellulose synthase-9 [Zea
mays],cellulose synthase catalytic subunit [Arabidopsis
thaliana],unnamed protein product [Arabidopsis
thaliana],, mRNA sequence
Length = 880
Score = 583 bits (294), Expect = e-164
Identities = 655/773 (84%), Gaps = 2/773 (0%)
Strand = Plus / Minus
Query: 323 cccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatggtcgggg 382
||||||||||||||||||| || ||||| |||| |||||||||| ||| || ||||| |
Sbjct: 812 cccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtg 753
Query: 383 tgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacgatgacccaga 442
||||||| ||| ||||||| || ||||||||||| ||||| | ||| || || |||||||
Sbjct: 752 tgcggttttgcntgcccataagacccttgaggaaggggtataagtgaacaatcacccaga 693
Query: 443 aggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgttgatggcgt 502
|||| ||||||||||| ||||||||||| ||||| || ||||| || |||||||||||||
Sbjct: 692 aggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatggcgt 633
Query: 503 aggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgggcgggatca 562
||||| | || || ||||| ||||||| ||| ||||||| |||||| || || ||||| |
Sbjct: 632 aggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcggagggatga 573
Query: 563 ggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgtccgaggcct 622
| ||||||||||||||||||||||| ||||| || |||||||| || ||||| ||||
Sbjct: 572 gaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcattagcct 513
Query: 623 tggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccctggaaca 682
| |||||||| ||||||||||||||||| ||||| |||||||| || || ||||| || |
Sbjct: 512 ttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctgaaaga 453
Query: 683 cggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctccaccact 742
|||| || || || || ||||| || || || ||||||||||| || |||||||||||||
Sbjct: 452 cggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccaccact 393
Query: 743 cgtcgatgcccaccccgctccacctcatctccaggatgcccgtggcgaagatcgagatga 802
|||| ||||| || || |||||||||||||| ||||| || ||||| || || || | ||
Sbjct: 392 cgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaaattgaaagga 333
Query: 803 agagggagatgaaccagatgctggcgaagttgctgatctctggaatgatgaactttccgg 862
|||| | ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 332 agagagcaatgaaccagatactggccaagttgctaatctctggcatgatgaactttccag 273
Query: 863 tgagcagacagatggcgggcaggatgcagtagatgagaagcgggatggacgtgagcgggt 922
|||||| |||||| || |||| || || |||| |||||||||| ||||| || ||||
Sbjct: 272 tgagcaaacagatagcaggcaatatacaatagactagaagcgggagagacgttagtgggt 213
Query: 923 agatggtggtgttgatgtacgcgaatctctccaggaacttgagccgccctccgtagccgt 982
| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
Sbjct: 212 aaatggtggtgttgatgtaagcgaatctctccaggaacttgaggcgccctccgtagccat 153
Query: 983 accacagggggcagtgccggctgaagaggatctccacggacccaagagcccaccggagca 1042
|||| | |||||| ||||||||||| || || || ||||| |||||||||||||||||||
Sbjct: 152 accataaggggcaatgccggctgaaaagaatttcaacggaaccaagagcccaccggagca 93
Query: 1043 cctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggc 1095
|||||||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct: 92 -ctggttcagacgatctgaaagattgatgggggcaga-tccttgaaagctggc 42
>gb|CA019265.1|CA019265 HV11G20r HV Hordeum vulgare subsp. vulgare cDNA clone HV11G20
5-PRIME, mRNA sequence
Length = 579
Score = 569 bits (287), Expect = e-160
Identities = 488/555 (87%)
Strand = Plus / Minus
Query: 2547 agcaaaccagatctcacatataacagatagaagccataatgggtatgcattgcgcacagg 2606
||||||||| ||||||||||||||||||| |||||| | ||||||||||| ||||||||
Sbjct: 563 agcaaaccaaatctcacatataacagataaaagccacagcgggtatgcattacgcacagg 504
Query: 2607 atttgtgatacggtagtgcaagaagatgcttagaacaatcaatcgcagcacaatgaccat 2666
|||||||| ||||||||||| ||||||||||||||||| ||| ||||| |||||||||||
Sbjct: 503 atttgtgagacggtagtgcaggaagatgcttagaacaaccaaccgcagaacaatgaccat 444
Query: 2667 cctgtatggatttatcctggaggaaggaagtggaactttcctagatagaggctgtcgagt 2726
||||| |||||||| |||| |||| || || || || |||||||||||||| |||||
Sbjct: 443 tctgtacggatttattttggatgaagcaatggggacctttctagatagaggctggcgagt 384
Query: 2727 ttcgtcgttcaataaggcatcttccatgttgtaatcagttgatgcatcaatatcaccaac 2786
||| || |||| ||| || |||||||||||||| ||||| |||||||| || ||| | |
Sbjct: 383 ttcatcattcagtaaagcgtcttccatgttgtattcagtagatgcatcgatgtcagtagc 324
Query: 2787 accccgaccctcagagggagcaatgcttgtgccattcgtcatgggaatcgtccccttgtc 2846
||||||| |||||||||||||||||||||||||| ||||||||||| | ||||||||
Sbjct: 323 tgcccgaccttcagagggagcaatgcttgtgccattagtcatgggaattgcacccttgtc 264
Query: 2847 ctgcttcattttccagccatcaaccctctctttccaggcaacattcccaatgctaccaga 2906
|||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||||
Sbjct: 263 ctgcttcattttccagccatcaactctctctttccaagcaacattcccaatactgccaga 204
Query: 2907 gaactcccttgacggatttggcgaatggttcacatagggaaatggagcacgcttgccaat 2966
||||||||||||||||||||| ||||| ||||| ||||| || |||||||| ||| ||
Sbjct: 203 gaactcccttgacggatttggtgaatgattcacgtaggggaacggagcacgtctgctgat 144
Query: 2967 gttcccagttggggacatcatatgatggtcaggggaagcaccagggatttctcctgagat 3026
||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||
Sbjct: 143 gttcccagtaggggacatcatatgatgatcaggggaagctccagggatttctcctgacat 84
Query: 3027 ctggctgttagtgactgatgggatgtatccccgaggaatctcgccactgtcatacttggt 3086
|||||||||||||||||| |||| |||||||| ||| ||||| |||||||| |||||||
Sbjct: 83 ctggctgttagtgactgaagggacgtatcccctagggatctctccactgtcgtacttgga 24
Query: 3087 aagcccgatctcgcc 3101
||||||||||||||
Sbjct: 23 gagcccgatctcgcc 9
>gb|CV061189.1|CV061189 BNEL65h6 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL65h6 5' similar to putative cellulose
synthase, mRNA sequence
Length = 590
Score = 569 bits (287), Expect = e-160
Identities = 482/547 (88%)
Strand = Plus / Minus
Query: 811 atgaaccagatgctggcgaagttgctgatctctggaatgatgaactttccggtgagcaga 870
||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 547 atgaaccagatactggccaagttgctaatctctggcatgatgaactttccagtgagcaga 488
Query: 871 cagatggcgggcaggatgcagtagatgagaagcgggatggacgtgagcgggtagatggtg 930
||||| || |||| || || |||| |||||||||| ||||| || ||||| ||||||
Sbjct: 487 cagatagcaggcaatatacaatagactagaagcgggagagacgttagtgggtaaatggtg 428
Query: 931 gtgttgatgtacgcgaatctctccaggaacttgagccgccctccgtagccgtaccacagg 990
||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| | |
Sbjct: 427 gtgttgatgtaagcgaatctctccaggaacttgaggcgccctccgtagccataccataag 368
Query: 991 gggcagtgccggctgaagaggatctccacggacccaagagcccaccggagcacctggttc 1050
||||| ||||||||||| || || || ||| |||||||||||||||||||| ||||||
Sbjct: 367 gggcaatgccggctgaaaagaatttcacgggaaccaagagcccaccggagcacttggttc 308
Query: 1051 agacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggcatgcag 1110
||||| || |||||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 307 agacgatctgaaagattgatgggggcagatcccttgaaagctgggcgcttaggcatgcaa 248
Query: 1111 tagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttctgtcaca 1170
|||| ||||||||||||| ||||||||||||||||| |||||||| |||||||| |||
Sbjct: 247 tagactgaccgccagcctcttgcgtgcatcttgaatccagtgagaatatcttctgtgaca 188
Query: 1171 gaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagccacagctt 1230
|| || || ||||| || |||||||||||||| |||| |||||||||||||||||| |||
Sbjct: 187 gatccataaatccaaccaatctcagttccccactcagacttgtcctcatagccacaactt 128
Query: 1231 ataacatggatagcttctttcagaagagactccggagttgcggactgaggaacaccacca 1290
|| ||||||||||||||||||| |||||| || ||||| | ||||||||| |||||||||
Sbjct: 127 atgacatggatagcttctttcaaaagagattctggagtggaggactgagggacaccacca 68
Query: 1291 tactccatcagagtggaggcaacaaacgctgcggactggccaaatctcttctccaggctc 1350
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||
Sbjct: 67 tattccatcagagtggaggcaacaaatgctgctgactggccaaatctcttctctaagctc 8
Query: 1351 atttgag 1357
|||||||
Sbjct: 7 atttgag 1
>gb|BQ471393.1|BQ471393 HV02E21r HV Hordeum vulgare subsp. vulgare cDNA clone HV02E21
5-PRIME, mRNA sequence
Length = 553
Score = 563 bits (284), Expect = e-158
Identities = 476/540 (88%)
Strand = Plus / Minus
Query: 2588 ggtatgcattgcgcacaggatttgtgatacggtagtgcaagaagatgcttagaacaatca 2647
|||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||
Sbjct: 553 ggtatgcattacgcacaggatttgtgagacggtagtgcaggaagatgcttagaacaacca 494
Query: 2648 atcgcagcacaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcc 2707
| ||||| ||||||||||| ||||| |||||||| |||| |||| || || || || |
Sbjct: 493 accgcagaacaatgaccattctgtacggatttattttggatgaagcaatggggacctttc 434
Query: 2708 tagatagaggctgtcgagtttcgtcgttcaataaggcatcttccatgttgtaatcagttg 2767
||||||||||||| |||||||| || |||| ||| || |||||||||||||| ||||| |
Sbjct: 433 tagatagaggctggcgagtttcatcattcagtaaagcgtcttccatgttgtattcagtag 374
Query: 2768 atgcatcaatatcaccaacaccccgaccctcagagggagcaatgcttgtgccattcgtca 2827
||||||| || ||| | | ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 373 atgcatcgatgtcagtagctgcccgaccttcagagggagcaatgcttgtgccattagtca 314
Query: 2828 tgggaatcgtccccttgtcctgcttcattttccagccatcaaccctctctttccaggcaa 2887
||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 313 tgggaattgcacccttgtcctgcttcattttccagccatcaactctctctttccaagcaa 254
Query: 2888 cattcccaatgctaccagagaactcccttgacggatttggcgaatggttcacatagggaa 2947
|||||||||| || |||||||||||||||||||||||||| ||||| ||||| ||||| |
Sbjct: 253 cattcccaatactgccagagaactcccttgacggatttggtgaatgattcacgtagggga 194
Query: 2948 atggagcacgcttgccaatgttcccagttggggacatcatatgatggtcaggggaagcac 3007
| |||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 193 acggagcacgtctgctgatgttcccagtaggggacatcatatgatgatcaggggaagctc 134
Query: 3008 cagggatttctcctgagatctggctgttagtgactgatgggatgtatccccgaggaatct 3067
|||||||||||||||| |||||||||||||||||||| |||| |||||||| ||| ||||
Sbjct: 133 cagggatttctcctgacatctggctgttagtgactgaagggacgtatcccctagggatct 74
Query: 3068 cgccactgtcatacttggtaagcccgatctcgccactgtcatacttggggcgaccaacat 3127
| |||||||| ||||||| |||||||||||||||||||||||||||||| | |||||||
Sbjct: 73 ctccactgtcgtacttggagagcccgatctcgccactgtcatacttggggtggccaacat 14
>gb|BU995821.1|BU995821 HM11H13r HM Hordeum vulgare subsp. vulgare cDNA clone HM11H13
5-PRIME, mRNA sequence
Length = 591
Score = 541 bits (273), Expect = e-152
Identities = 504/579 (87%), Gaps = 4/579 (0%)
Strand = Plus / Minus
Query: 1026 aagagcccaccggagcacctggttcagacggtccgaaagattgatgggggcagacccctt 1085
|||||||||||||||||| ||||||||||| || |||||||||||||||||||| |||||
Sbjct: 591 aagagcccaccggagcacttggttcagacgatctgaaagattgatgggggcagatccctt 532
Query: 1086 gaaagctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaa 1145
||||||||| ||||| |||||||| |||| ||||||||||||| ||||||||||||||
Sbjct: 531 gaaagctgggcgcttaggcatgcaatagactgaccgccagcctcttgcgtgcatcttgaa 472
Query: 1146 tccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctcagttccccattc 1205
||| |||||||| |||||||| ||||| || || ||||| || |||||||||||||| ||
Sbjct: 471 tccagtgagaatatcttctgtgacagatccataaatccaaccaatctcagttccccactc 412
Query: 1206 agtcttgtcctcatagccacagcttataacatggatagcttctttcagaagagactccgg 1265
|| |||||||||||||||||| ||||| ||||||||||||||||||| |||||| || ||
Sbjct: 411 agacttgtcctcatagccacaacttatgacatggatagcttctttcaaaagagattctgg 352
Query: 1266 agttgcggactgaggaacaccaccatactccatcagagtggaggcaacaaacgctgcgga 1325
||| | ||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 351 agtggaggactgaggaacaccaccatattccatcagagtggaggcaacaaatgctgctga 292
Query: 1326 ctggccaaatctcttctccaggctcatttgagacataagaagtgatttctcgtcgtcaaa 1385
|||||||||||||||||| | ||||||||||||||| |||| ||||||||| || |||||
Sbjct: 291 ctggccaaatctcttctctaagctcatttgagacatgagaactgatttctcatcatcaaa 232
Query: 1386 tccagcgccttcaactccctcctctatatcttcaaggttgaatactggcacagaactgtc 1445
||||| |||||||| ||||||||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 231 cccagcaccttcaacaccctcctctatgtcttcaagattgaacactggaacagaactgtc 172
Query: 1446 cacatgcttctgcgacttcttcttgtccgagccc---ttctttgatttgcttgccttctt 1502
|||||||| | ||||| ||||| || |||| | |||||||| ||||||||||||||
Sbjct: 171 gacatgcttgtttgactttttcttatctgagctccttttctttgacttgcttgccttctt 112
Query: 1503 cctaccgccacatagtgatgacaagaaaccacccttcttctgcttaattgggggctcata 1562
| | || ||||| ||||||| |||||||| ||||||| |||||| ||||| |||||
Sbjct: 111 cttgcccccacacagtgatgccaagaaacttggcttcttcgccttaatcgggggttcata 52
Query: 1563 accatatagagctgttcggttgaaaacacagccagttcc 1601
|||||| | ||| |||| ||| |||||||| ||||||||
Sbjct: 51 accatagatagccgttctgtt-aaaacacaaccagttcc 14
>gb|BF255020.3|BF255020 HVSMEf0005K21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0005K21f, mRNA sequence
Length = 594
Score = 519 bits (262), Expect = e-145
Identities = 472/538 (87%), Gaps = 3/538 (0%)
Strand = Plus / Minus
Query: 919 gggtagatggtggtgttgatgtacgcgaatctctccaggaacttgagccgccctccgtag 978
||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 587 gggtaaatggtggtgttgatgtaagcgaatctctccaggaacttgaagcgccctccgtag 528
Query: 979 ccgtaccacagggggcagtgccggctgaagaggatctccacggacccaagagcccaccgg 1038
| |||| | |||||| ||||||||||| || || || ||||| |||||||||| ||||
Sbjct: 527 caa-accataaggggcaatgccggctgaaaagaatttcaacggaaccaagagccccccgg 469
Query: 1039 agcacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgc 1098
||||| ||||||| || || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 468 agcacttggttcaagcgatctgaaagattgatgggggcagatcccttgaaagctgggcgc 409
Query: 1099 ttg-ggcatgcagtagatcgaccgccagcctcgcgcgtgcat-cttgaatccggtgagaa 1156
|| |||||||| |||| ||||||||||||| |||||||| ||||||||| |||||||
Sbjct: 408 tttaggcatgcaatagactgaccgccagcctcttgcgtgcattcttgaatccagtgagaa 349
Query: 1157 tgtcttctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcct 1216
| |||||||| ||||| || || ||||| || |||||||||||||| |||| ||||||||
Sbjct: 348 tatcttctgtgacagatccataaatccaaccaatctcagttccccactcagacttgtcct 289
Query: 1217 catagccacagcttataacatggatagcttctttcagaagagactccggagttgcggact 1276
|||||||||| ||||| ||||||||||||||||||| |||||| || ||||| | |||||
Sbjct: 288 catagccacaacttatgacatggatagcttctttcaaaagagattctggagtggaggact 229
Query: 1277 gaggaacaccaccatactccatcagagtggaggcaacaaacgctgcggactggccaaatc 1336
|||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 228 gaggaacaccaccatattccatcagagtggaggcaacaaatgctgctgactggccaaatc 169
Query: 1337 tcttctccaggctcatttgagacataagaagtgatttctcgtcgtcaaatccagcgcctt 1396
| ||||| | ||||||||||||||| |||| ||||||||| || ||||| ||||| ||||
Sbjct: 168 ttttctctaagctcatttgagacatgagaactgatttctcatcatcaaacccagcacctt 109
Query: 1397 caactccctcctctatatcttcaaggttgaatactggcacagaactgtccacatgctt 1454
|||| ||||||||||| |||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 108 caacaccctcctctatgtcttcaagattgaacactggaacagaactgtcgacatgctt 51
>gb|AV932043.1|AV932043 AV932043 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2a04 5', mRNA sequence
Length = 615
Score = 517 bits (261), Expect = e-145
Identities = 474/545 (86%)
Strand = Plus / Minus
Query: 715 acccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctcc 774
||||||||||| || ||||||||||||||||| ||||| || || ||||||||||||||
Sbjct: 561 acccagaactgttcattcctccaccactcgtcaatgccaacaccactccacctcatctca 502
Query: 775 aggatgcccgtggcgaagatcgagatgaagagggagatgaaccagatgctggcgaagttg 834
||||| || ||||| || || || | |||||| | ||||||||||| ||||| ||||||
Sbjct: 501 aggataccggtggcaaaaattgaaaggaagagagcaatgaaccagatactggccaagttg 442
Query: 835 ctgatctctggaatgatgaactttccggtgagcagacagatggcgggcaggatgcagtag 894
|| |||||||| |||||||||||||| ||||||| |||||| || |||| || || |||
Sbjct: 441 ctaatctctggcatgatgaactttccagtgagcaaacagatagcaggcaatatacaatag 382
Query: 895 atgagaagcgggatggacgtgagcgggtagatggtggtgttgatgtacgcgaatctctcc 954
| |||||||||| ||||| || ||||| ||||||||||||||||| ||||||||||||
Sbjct: 381 actagaagcgggagagacgttagtgggtaaatggtggtgttgatgtaagcgaatctctcc 322
Query: 955 aggaacttgagccgccctccgtagccgtaccacagggggcagtgccggctgaagaggatc 1014
||||||||||| |||||||||||||| ||||| | |||||| ||||||||||| || ||
Sbjct: 321 aggaacttgaggcgccctccgtagccataccataaggggcaatgccggctgaaaagaatt 262
Query: 1015 tccacggacccaagagcccaccggagcacctggttcagacggtccgaaagattgatgggg 1074
|| ||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 261 tcaacggaaccaagagcccaccggagcacttggttcagacgatctgaaagattgatgggg 202
Query: 1075 gcagaccccttgaaagctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcg 1134
||||| |||||||||||||| ||||| |||||||| |||| ||||||||||||| |||
Sbjct: 201 gcagatcccttgaaagctgggcgcttaggcatgcaatagactgaccgccagcctcttgcg 142
Query: 1135 tgcatcttgaatccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctca 1194
|||||||||||||| |||||||| |||||||| ||||| || || ||||| || ||||||
Sbjct: 141 tgcatcttgaatccagtgagaatatcttctgtgacagatccataaatccaaccaatctca 82
Query: 1195 gttccccattcagtcttgtcctcatagccacagcttataacatggatagcttctttcaga 1254
|||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||| |
Sbjct: 81 gttccccactcagacttgtcctcatagccacaacttatgacatggatagcttctttcaaa 22
Query: 1255 agaga 1259
|||||
Sbjct: 21 agaga 17
>gb|CA019676.1|CA019676 HV12L21r HV Hordeum vulgare subsp. vulgare cDNA clone HV12L21
5-PRIME, mRNA sequence
Length = 516
Score = 515 bits (260), Expect = e-144
Identities = 446/508 (87%)
Strand = Plus / Minus
Query: 2594 cattgcgcacaggatttgtgatacggtagtgcaagaagatgcttagaacaatcaatcgca 2653
|||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 516 cattacgcacaggatttgtgagacggtagtgcaggaagatgcttagaacaaccaaccgca 457
Query: 2654 gcacaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagata 2713
| ||||||||||| ||||| |||||||| |||| |||| || || || || |||||||
Sbjct: 456 gaacaatgaccattctgtacggatttattttggatgaagcaatggggacctttctagata 397
Query: 2714 gaggctgtcgagtttcgtcgttcaataaggcatcttccatgttgtaatcagttgatgcat 2773
||||||| |||||||| || |||| ||| || |||||||||||||| ||||| |||||||
Sbjct: 396 gaggctggcgagtttcatcattcagtaaagcgtcttccatgttgtattcagtagatgcat 337
Query: 2774 caatatcaccaacaccccgaccctcagagggagcaatgcttgtgccattcgtcatgggaa 2833
| || ||| | | ||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 336 cgatgtcagtagctgcccgaccttcagagggagcaatgcttgtgccattagtcatgggaa 277
Query: 2834 tcgtccccttgtcctgcttcattttccagccatcaaccctctctttccaggcaacattcc 2893
| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 276 ttgcacccttgtcctgcttcattttccagccatcaactctctctttccaagcaacattcc 217
Query: 2894 caatgctaccagagaactcccttgacggatttggcgaatggttcacatagggaaatggag 2953
|||| || |||||||||||||||||||||||||| ||||| ||||| ||||| || ||||
Sbjct: 216 caatactgccagagaactcccttgacggatttggtgaatgattcacgtaggggaacggag 157
Query: 2954 cacgcttgccaatgttcccagttggggacatcatatgatggtcaggggaagcaccaggga 3013
|||| ||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||
Sbjct: 156 cacgtctgctgatgttcccagtaggggacatcatatgatgatcaggggaagctccaggga 97
Query: 3014 tttctcctgagatctggctgttagtgactgatgggatgtatccccgaggaatctcgccac 3073
|||||||||| |||||||||||||||||||| |||| |||||||| ||| ||||| ||||
Sbjct: 96 tttctcctgacatctggctgttagtgactgaagggacgtatcccctagggatctctccac 37
Query: 3074 tgtcatacttggtaagcccgatctcgcc 3101
|||| ||||||| ||||||||||||||
Sbjct: 36 tgtcgtacttggagagcccgatctcgcc 9
>gb|CA031458.1|CA031458 HX10A06r HX Hordeum vulgare subsp. vulgare cDNA clone HX10A06
5-PRIME, mRNA sequence
Length = 627
Score = 509 bits (257), Expect = e-142
Identities = 532/623 (85%), Gaps = 3/623 (0%)
Strand = Plus / Minus
Query: 2293 agcatcgcagctccatcatcagatacatagcaagagaccttatccacagggtaatccaca 2352
||||||||||||||||||||||||||||||||||| || || || |||||||| ||||||
Sbjct: 620 agcatcgcagctccatcatcagatacatagcaagatactttgtcaacagggtagtccaca 561
Query: 2353 gcaagaatggatagcacggtattggcagtgacaagaggaggctccttcattgggtcgact 2412
||||| || || ||||| ||||| |||||||| ||||||||||||||||| || || ||
Sbjct: 560 gcaaggatagaaagcacagtatttgcagtgacgagaggaggctccttcataggatccaca 501
Query: 2413 gtactgacgaaaatgtcaacagcagccaactgagatggctcaccttcccggtcatacctt 2472
|||||||| ||||||||||||| |||||||||||| |||||| |||||||||||||||
Sbjct: 500 gtactgacaaaaatgtcaacaggagccaactgagacaactcaccatcccggtcatacctt 441
Query: 2473 aatgccagcctatcaaggtacgtctcccggttgattggaaaccacttagggaactgatcc 2532
|| |||||||| |||||||| || || || || | |||| ||||||| ||||||||||||
Sbjct: 440 aaagccagcctgtcaaggtaagtttcacgattcactggagaccacttggggaactgatcc 381
Query: 2533 aatatccacgaaagagcaaaccagatctcacatataacagatagaagccataatgggtat 2592
|| ||||| |||| ||||||||| ||||||||||| || ||||| ||||| | ||| |||
Sbjct: 380 aaaatccaggaaaaagcaaaccaaatctcacatatcaccgatagcagccaaagtggatat 321
Query: 2593 gcattgcgcacaggatttgtgatacggtagtgcaagaagatgcttagaacaatcaatcgc 2652
||||| || ||||| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 320 gcattacggacagggtttgtgatacggtagtgcaggaagatgcagaggacaatcaatcgt 261
Query: 2653 agcacaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagat 2712
|||||||||||||| ||||| |||||||| ||||| ||||||| ||| ||||| |||||
Sbjct: 260 agcacaatgaccattctgtagggatttattctggatgaaggaattggcacttttctagag 201
Query: 2713 agaggctgtcgagtttcgtcgttcaataaggcatcttccatgttgtaatcagttgatgca 2772
|||||||| || ||||| || |||| ||||| ||||||||| ||| ||||| |||||
Sbjct: 200 agaggctggcgtgtttcatcattcagtaaggggtcttccatgccgtagtcagtacatgca 141
Query: 2773 tcaatatcaccaacaccccgaccctcagagggagcaatgcttgtgccattcgtcatggga 2832
|| ||||||||| || || || || || |||||||||||||| ||||| |||||||||
Sbjct: 140 tcgatatcaccatttccacggccttcggaaggagcaatgcttgttccattagtcatggga 81
Query: 2833 atcgtccccttgtcctgcttcattttccagccatcaaccctctctttccaggcaacattc 2892
|| | |||||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 80 attgcacccttgtc---tttcattttccagccatcaactctctctttccacgcaacattg 24
Query: 2893 ccaatgctaccagagaactccct 2915
|||| ||||||||||||||||||
Sbjct: 23 ccaaggctaccagagaactccct 1
>gb|CA009062.1|CA009062 HU13B03r HU Hordeum vulgare subsp. vulgare cDNA clone HU13B03
5-PRIME, mRNA sequence
Length = 588
Score = 505 bits (255), Expect = e-141
Identities = 496/576 (86%), Gaps = 3/576 (0%)
Strand = Plus / Minus
Query: 1347 gctcatttgagacataagaagtgatttctcgtcgtcaaatccagcgccttcaactccctc 1406
||||||||||||||| |||| ||||||||| || ||||| |||| |||||||| |||||
Sbjct: 587 gctcatttgagacatgagaactgatttctcatcatcaaacncagcaccttcaacaccctc 528
Query: 1407 ctctatatcttcaaggttgaatactggcacagaactgtccacatgcttctgcgacttctt 1466
|||||| |||||||| ||||| ||||| ||||||||||| |||||||| | ||||| ||
Sbjct: 527 ctctatgtcttcaagattgaacactggaacagaactgtcgacatgcttgtttgacttttt 468
Query: 1467 cttgtccgagccc---ttctttgatttgcttgccttcttcctaccgccacatagtgatga 1523
||| || |||| | |||||||| ||||||||||||||| | || ||||| |||||||
Sbjct: 467 cttatctgagctccttttctttgacttgcttgccttcttcttgcccccacacagtgatgc 408
Query: 1524 caagaaaccacccttcttctgcttaattgggggctcataaccatatagagctgttcggtt 1583
|||||||| ||||||| |||||| ||||| ||||||||||| | ||| |||| |||
Sbjct: 407 caagaaacttggcttcttcgccttaatcgggggttcataaccatagatagccgttctgtt 348
Query: 1584 gaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaagtt 1643
||||||||| |||||||| ||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 347 gaaaacacaaccagttcccacataaactggcccttgaatgccatcaaggcccctcaagtt 288
Query: 1644 aataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcgaa 1703
|||| | ||||| || ||||||||||| ||||||||||||||||| ||||| ||||| ||
Sbjct: 287 aatatcaaaaaagacagtgttcctgttcgcatatcgatcattcctatcaataccatcaaa 228
Query: 1704 tctctggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaagca 1763
||||| || ||||| || || ||||| | |||||||| || ||||| ||||||||
Sbjct: 227 cctctgtgggaactgcacataacagacttgcggacctaggtttggatccattaggaagca 168
Query: 1764 catagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaacat 1823
||||||||||| || |||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 167 catagcttcccggacagccttgctgttgttgatgtagtgatcacaatcaagattcaacat 108
Query: 1824 gtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagcttt 1883
|||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 107 gtattgtccattagtaaggacagccgagacacgaacaagggcattcatggcaccagcctt 48
Query: 1884 cttgtgatgctggaatccaggacgcttttcacgaga 1919
|||||| |||||||||||||||||||||||||||||
Sbjct: 47 cttgtggtgctggaatccaggacgcttttcacgaga 12
>gb|BI951084.1|BI951084 HVSMEl0024F09f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0024F09f, mRNA sequence
Length = 900
Score = 482 bits (243), Expect = e-134
Identities = 465/539 (86%)
Strand = Plus / Minus
Query: 730 ttcctccaccactcgtcgatgcccaccccgctccacctcatctccaggatgcccgtggcg 789
||||||||| ||||||| ||||| ||| |||||||||||||| ||||| || |||||
Sbjct: 547 ttcctccacgactcgtcaatgccacacccactccacctcatctcaaggataccggtggca 488
Query: 790 aagatcgagatgaagagggagatgaaccagatgctggcgaagttgctgatctctggaatg 849
|| || || | |||||| | |||| |||||| ||||| |||||| | |||||||| |||
Sbjct: 487 aaaattgaaaggaagagagcaatgagccagatactggccaagttgttaatctctggcatg 428
Query: 850 atgaactttccggtgagcagacagatggcgggcaggatgcagtagatgagaagcgggatg 909
||||||||||| |||||||||||||| || |||| || || |||| ||||||||||
Sbjct: 427 atgaactttccagtgagcagacagattgcaggcaatatacaatagactagaagcgggaga 368
Query: 910 gacgtgagcgggtagatggtggtgttgatgtacgcgaatctctccaggaacttgagccgc 969
||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 367 gacgttagtgggtaaatggtggtgttgatgtaagcgaatctctccaggaacttgaggcgc 308
Query: 970 cctccgtagccgtaccacagggggcagtgccggctgaagaggatctccacggacccaaga 1029
||||||||||| ||||| | |||||| ||||||||||| || || || ||||| ||||||
Sbjct: 307 cctccgtagccataccataaggggcaatgccggctgaaaagaatttcaacggaaccaaga 248
Query: 1030 gcccaccggagcacctggttcagacggtccgaaagattgatgggggcagaccccttgaaa 1089
|||||||||||||| ||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 247 gcccaccggagcacttggttcagacgatctgaaagattgatgggggcagatcccttgaaa 188
Query: 1090 gctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccg 1149
||||| ||||| |||||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 187 gctgggcgcttaggcatgcaatagactgaccgccagcctcttgcgtgcatcttgaatcca 128
Query: 1150 gtgagaatgtcttctgtcacagaaccgtagatccacccgatctcagttccccattcagtc 1209
|||||||| |||||||| ||||| || || ||||| || |||||||||||||| |||| |
Sbjct: 127 gtgagaatatcttctgtgacagatccataaatccaaccaatctcagttccccactcagac 68
Query: 1210 ttgtcctcatagccacagcttataacatggatagcttctttcagaagagactccggagt 1268
||||||||||||||||| ||||| ||||||||||||||||||| |||||| || |||||
Sbjct: 67 ttgtcctcatagccacaacttatgacatggatagcttctttcaaaagagattctggagt 9
>gb|CA020225.1|CA020225 HV14L03r HV Hordeum vulgare subsp. vulgare cDNA clone HV14L03
5-PRIME, mRNA sequence
Length = 582
Score = 478 bits (241), Expect = e-133
Identities = 400/453 (88%)
Strand = Plus / Minus
Query: 1552 gggggctcataaccatatagagctgttcggttgaaaacacagccagttccgacataaact 1611
||||| ||||||||||||| |||||||| |||||| ||||| ||||| || |||||||||
Sbjct: 463 gggggttcataaccatataaagctgttctgttgaacacacaaccagtccccacataaact 404
Query: 1612 ggtccttggatgccatcaagacctctcaagttaataccgaaaaacacggtgttcctgttg 1671
|||||||| |||||||| ||||| |||||||||||| | ||||||||||||||||||||
Sbjct: 403 ggtccttgaatgccatcgagacccctcaagttaatatcaaaaaacacggtgttcctgttt 344
Query: 1672 gcatatcgatcattcctgtcaatgccatcgaatctctggggaaactgaacgtagcagaca 1731
||||||| ||||||| | |||||||||||||| ||||| ||||| || || || ||||
Sbjct: 343 gcatatctatcattcgtatcaatgccatcgaacctctgaggaaattggacataacagatt 284
Query: 1732 ctccttcctaggttagggtccataaggaagcacatagcttccctgagagccttactgttg 1791
|||||||||| |||||||||||||| ||||||||||| || || ||||| | || |||
Sbjct: 283 ttccttcctagattagggtccataagaaagcacatagcctctcttagagcgctgctattg 224
Query: 1792 ttaatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgag 1851
|| |||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||
Sbjct: 223 ttgatgtagtgatcacaatcaagattcaacatgtactgcccattagtaaggacagctgat 164
Query: 1852 acacgaacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgcttt 1911
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 163 acacgaacaagtgcattcatggcaccagctttcttgtggtgctggaatccaggacgtttc 104
Query: 1912 tcacgagaaacatagaccaaacggggtagctcattgccctcagtatcaaggccaccactg 1971
|||||||| ||||| |||||||| || ||||||||||| |||||||| ||||| |||||
Sbjct: 103 tcacgagacacataaaccaaacgaggaagctcattgccatcagtatcgaggcctccacta 44
Query: 1972 tgaccaaggaaaacctgaatcattccaggatgg 2004
||||||||||||||||||| |||||||||||||
Sbjct: 43 tgaccaaggaaaacctgaagcattccaggatgg 11
>gb|BE193304.2|BE193304 HVSMEh0080I07f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0080I07f, mRNA sequence
Length = 682
Score = 446 bits (225), Expect = e-123
Identities = 358/403 (88%)
Strand = Plus / Minus
Query: 1594 ccagttccgacataaactggtccttggatgccatcaagacctctcaagttaataccgaaa 1653
|||||||| ||||||||||| | ||| ||||||||||| || |||||||||||| | |||
Sbjct: 403 ccagttcccacataaactggcctttgaatgccatcaaggcccctcaagttaatatcaaaa 344
Query: 1654 aacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcgaatctctgggga 1713
|| || ||||||||||| ||||||||||||||||| ||||| ||||| || ||||| ||
Sbjct: 343 aagacagtgttcctgttcgcatatcgatcattcctatcaataccatcaaacctctgtggg 284
Query: 1714 aactgaacgtagcagacactccttcctaggttagggtccataaggaagcacatagcttcc 1773
||||| || || ||||| | | |||||| || ||||| ||||||||||||||||||
Sbjct: 283 aactgcacataacagacttgcggacntaggtttggatccattaggaagcacatagcttcc 224
Query: 1774 ctgagagccttactgttgttaatgtagtgatcacaatcaagattcaacatgtattgtcca 1833
| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cggacagccttgctgttgttgatgtagtgatcacaatcaagattcaacatgtattgtcca 164
Query: 1834 ttggtaagcacagctgagacacgaacaagagcattcatggcaccagctttcttgtgatgc 1893
|| ||||| ||||| |||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct: 163 ttagtaaggacagccgagacacgaacaagggcattcatggcaccagccttcttgtggtgc 104
Query: 1894 tggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcattgccctca 1953
|||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 103 tggaatccaggacgcttttcacgagacacatagaccaaacgggggagctcattaccctcg 44
Query: 1954 gtatcaaggccaccactgtgaccaaggaaaacctgaatcattc 1996
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 43 gtatcaaggccaccactgtgaccaaggaaaacntgaatcattc 1
>gb|BF624752.2|BF624752 HVSMEa0017K09f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0017K09f, mRNA sequence
Length = 789
Score = 434 bits (219), Expect = e-120
Identities = 387/443 (87%)
Strand = Plus / Minus
Query: 1553 ggggctcataaccatatagagctgttcggttgaaaacacagccagttccgacataaactg 1612
|||| ||||||||||| | ||| ||| |||||||||||| |||||||||||||||||||
Sbjct: 525 ggggttcataaccatagatagccgttgtgttgaaaacacaaccagttccgacataaactg 466
Query: 1613 gtccttggatgccatcaagacctctcaagttaataccgaaaaacacggtgttcctgttgg 1672
| ||| ||||||||||| || |||||||||||| | ||||| || ||||||||||| |
Sbjct: 465 gccctgaaatgccatcaaggcccctcaagttaatatcaaaaaagacagtgttcctgttcg 406
Query: 1673 catatcgatcattcctgtcaatgccatcgaatctctggggaaactgaacgtagcagacac 1732
|||||||||||||||| |||| |||||||| ||||| || ||||| || || |||||
Sbjct: 405 catatcgatcattcctatcaagaccatcgaacctctgtgggaactgcacataacagactt 346
Query: 1733 tccttcctaggttagggtccataaggaagcacatagcttccctgagagccttactgttgt 1792
| |||||||| || ||||| ||||||||||||||||||| || ||| || |||||||
Sbjct: 345 gcggacctaggtttggatccattaggaagcacatagcttcccggacagcattgctgttgt 286
Query: 1793 taatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgaga 1852
| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 285 tgatgtagtgatcacaatcaagattcaacatgtattgtccattagtaaggacagccgaga 226
Query: 1853 cacgaacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgctttt 1912
|||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 225 cacgaacaagggcattcatggcaccagccttattgtggtgctggaatccaggacgctttt 166
Query: 1913 cacgagaaacatagaccaaacggggtagctcattgccctcagtatcaaggccaccactgt 1972
||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 165 cacgagacacatagaccaaacgggggagctcattaccctcggtatcaaggccacctctgt 106
Query: 1973 gaccaaggaaaacctgaatcatt 1995
||||||| ||| | |||||||||
Sbjct: 105 gaccaagtaaatcttgaatcatt 83
>gb|BE195554.3|BE195554 HVSMEh0089G13f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0089G13f, mRNA sequence
Length = 845
Score = 434 bits (219), Expect = e-120
Identities = 441/511 (86%), Gaps = 3/511 (0%)
Strand = Plus / Minus
Query: 2308 tcatcagatacatagcaagagaccttatccacagggtaatccaca-gcaagaatggatag 2366
|||||||||||||||||||||||||| |||| || ||||| ||| ||||||||||||||
Sbjct: 510 tcatcagatacatagcaagagaccttgtccatgggataatc-acacgcaagaatggatag 452
Query: 2367 cacggtattggcagtgacaagaggaggctccttcattgggtcgactgtactgacgaaaat 2426
| |||| ||| |||| || | ||| |||||||||| |||||||||||||||| ||| ||
Sbjct: 451 cccggtgttgacagtaacgataggtggctccttcaaggggtcgactgtactgaggaatat 392
Query: 2427 gtcaacagcagccaactgagatggctcaccttcccggtcataccttaatgccagcctatc 2486
||||||||||||||||||||| || |||| | |||||||||||||| ||||| |||||
Sbjct: 391 gtcaacagcagccaactgagagggttcacttcttcggtcataccttaaagccagtctatc 332
Query: 2487 aaggtacgtctcccggttgattgg-aaaccacttagggaactgatccaatatccacgaaa 2545
|||||| ||||||||||||||||| ||||||||| ||||||||||||| |||||| || |
Sbjct: 331 aaggtaggtctcccggttgattgggaaaccacttcgggaactgatccagtatccaggata 272
Query: 2546 gagcaaaccagatctcacatataacagatagaagccataatgggtatgcattgcgcacag 2605
||||||||| ||||||||||||||||||| |||||| | ||||||||||| |||||||
Sbjct: 271 aagcaaaccaaatctcacatataacagataaaagccacagcgggtatgcattacgcacag 212
Query: 2606 gatttgtgatacggtagtgcaagaagatgcttagaacaatcaatcgcagcacaatgacca 2665
||||||||| ||||||||||| ||||||||||||||||| ||| ||||| ||||||||||
Sbjct: 211 gatttgtgagacggtagtgcaggaagatgcttagaacaaccaaccgcagaacaatgacca 152
Query: 2666 tcctgtatggatttatcctggaggaaggaagtggaactttcctagatagaggctgtcgag 2725
| ||||| |||||||| |||| |||| || || || || |||||||||||||| ||||
Sbjct: 151 ttctgtacggatttattttggatgaagcaatggggacctttctagatagaggctggcgag 92
Query: 2726 tttcgtcgttcaataaggcatcttccatgttgtaatcagttgatgcatcaatatcaccaa 2785
|||| || |||| ||| || |||||||||||||| ||||| |||||||| || ||| |
Sbjct: 91 tttcatcattcagtaaagcgtcttccatgttgtattcagtagatgcatcgatgtcagtag 32
Query: 2786 caccccgaccctcagagggagcaatgcttgt 2816
| ||||||| ||||||||||||||||||||
Sbjct: 31 ctgcccgaccttcagagggagcaatgcttgt 1
>gb|AV914933.1|AV914933 AV914933 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9b06 5', mRNA sequence
Length = 654
Score = 424 bits (214), Expect = e-117
Identities = 517/618 (83%)
Strand = Plus / Minus
Query: 319 cgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatggtc 378
||||||||||||||||||||||| || ||||| |||| |||||||||| ||| || |||
Sbjct: 618 cgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtc 559
Query: 379 ggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacgatgacc 438
|| |||||||| ||||||||||| || ||||||||||| ||||| | ||| || || |||
Sbjct: 558 ggtgtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaatcacc 499
Query: 439 cagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgttgatg 498
|||||||| ||||||||||| ||||||||||| ||||| || ||||| || |||||||||
Sbjct: 498 cagaaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatg 439
Query: 499 gcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgggcggg 558
||||||||| | || || ||||| ||||||| ||| ||||||| |||||| || || |||
Sbjct: 438 gcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcggaggg 379
Query: 559 atcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgtccgag 618
|| || ||||||||||||||||||||||| ||||| || |||||||| || |||||
Sbjct: 378 atgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcatta 319
Query: 619 gccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccctgg 678
||||| |||||||| ||||||||||||||||| ||||| |||||||| || || |||||
Sbjct: 318 gcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctga 259
Query: 679 aacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctccac 738
|| ||||| || || || || ||||| || || || ||||||||||| || |||||||||
Sbjct: 258 aagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccac 199
Query: 739 cactcgtcgatgcccaccccgctccacctcatctccaggatgcccgtggcgaagatcgag 798
|||||||| ||||| || || |||||||||||||| ||||| || ||||| || || ||
Sbjct: 198 cactcgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaaattgaa 139
Query: 799 atgaagagggagatgaaccagatgctggcgaagttgctgatctctggaatgatgaacttt 858
| |||||| | ||||||||||| ||||| |||||||| |||||||| ||||||||||||
Sbjct: 138 aggaagagagcaatgaaccagatactggccaagttgctaatctctggcatgatgaacttt 79
Query: 859 ccggtgagcagacagatggcgggcaggatgcagtagatgagaagcgggatggacgtgagc 918
|| ||||||| |||||| || |||| || || |||| |||||||||| ||||| ||
Sbjct: 78 ccagtgagcaaacagatagcaggcaatatacaatagactagaagcgggagagacgttagt 19
Query: 919 gggtagatggtggtgttg 936
||||| ||||||||||||
Sbjct: 18 gggtaaatggtggtgttg 1
>gb|BQ468619.1|BQ468619 HM01M13T HM Hordeum vulgare subsp. vulgare cDNA clone HM01M13
5-PRIME, mRNA sequence
Length = 653
Score = 416 bits (210), Expect = e-114
Identities = 504/602 (83%)
Strand = Plus / Minus
Query: 254 cctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggt 313
|||||||||||||||||||| | ||| |||| || |||||||| || |||||||| ||||
Sbjct: 612 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 553
Query: 314 cgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacga 373
||||||||||||||||||||||||||||| | || || ||||||||||||||||| ||||
Sbjct: 552 cgatgcgaacccacagcaaggagaagatgtatgcaagaaggatggcccagacgacaacga 493
Query: 374 tggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacga 433
||||||| ||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 492 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 433
Query: 434 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgt 493
| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 432 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgt 373
Query: 494 tgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgg 553
|||| ||||||||| | || || || || ||||| ||||||||||||| ||| || || |
Sbjct: 372 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 313
Query: 554 gcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgt 613
| |||||||| || |||||||||||||||||||| ||||| || || || || ||||
Sbjct: 312 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 253
Query: 614 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggc 673
| || || || || ||||| |||||| ||||||||||||| || || ||||| || || |
Sbjct: 252 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 193
Query: 674 cctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcc 733
| ||||| || || || || || || || || || ||||| ||||||||||| || ||||
Sbjct: 192 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 133
Query: 734 tccaccactcgtcgatgcccaccccgctccacctcatctccaggatgcccgtggcgaaga 793
||||||||||||||||||| || ||||||||||||||||| ||||| || ||||| ||||
Sbjct: 132 tccaccactcgtcgatgccaacaccgctccacctcatctcaaggataccagtggcaaaga 73
Query: 794 tcgagatgaagagggagatgaaccagatgctggcgaagttgctgatctctggaatgatga 853
|||| || ||||| ||||| ||||| || ||||| | |||||| |||| ||| |||||||
Sbjct: 72 tcgaaataaagagagagataaaccaaatactggcaatgttgctaatctgtgggatgatga 13
Query: 854 ac 855
||
Sbjct: 12 ac 11
>gb|BQ463573.1|BQ463573 HI05L24r HI Hordeum vulgare subsp. vulgare cDNA clone HI05L24
5-PRIME, mRNA sequence
Length = 591
Score = 414 bits (209), Expect = e-114
Identities = 454/536 (84%)
Strand = Plus / Minus
Query: 579 gaacatgtacagctccgcgaagtcgccgtcctcgtccgaggccttggaggtgacggtgaa 638
||||||||| ||||| || |||||||| || ||||| |||| |||||||| |||||
Sbjct: 591 gaacatgtagagctcagcaaagtcgccttcttcgtcattagcctntgaggtgacagtgaa 532
Query: 639 gttggtgtcgatgccggccagcaccttgagcaggccctggaacacggcgaagaggtgcgc 698
|||||||||||| ||||| |||||||| || || ||||| || ||||| || || || ||
Sbjct: 531 gttggtgtcgataccggcaagcaccttcagaagaccctgaaagacggcaaacagatgggc 472
Query: 699 ggagatgcccccgatcacccagaactgctcgttcctccaccactcgtcgatgcccacccc 758
||||| || || || ||||||||||| || ||||||||||||||||| ||||| || ||
Sbjct: 471 agagatacctccaatgacccagaactgttcattcctccaccactcgtcaatgccaacacc 412
Query: 759 gctccacctcatctccaggatgcccgtggcgaagatcgagatgaagagggagatgaacca 818
|||||||||||||| ||||| || ||||| || || || | |||||| | ||||||||
Sbjct: 411 actccacctcatctcaaggataccggtggcaaaaattgaaaggaagagagcaatgaacca 352
Query: 819 gatgctggcgaagttgctgatctctggaatgatgaactttccggtgagcagacagatggc 878
||| ||||| |||||||| |||||||| |||||||||||||| ||||||| |||||| ||
Sbjct: 351 gatactggccaagttgctaatctctggcatgatgaactttccagtgagcaaacagatagc 292
Query: 879 gggcaggatgcagtagatgagaagcgggatggacgtgagcgggtagatggtggtgttgat 938
|||| || || |||| |||||||||| ||||| || ||||| ||||||||||||||
Sbjct: 291 aggcaatatacaatagactagaagcgggagagacgttagtgggtaaatggtggtgttgat 232
Query: 939 gtacgcgaatctctccaggaacttgagccgccctccgtagccgtaccacagggggcagtg 998
||| ||||||||||||||||||||||| |||||||||||||| ||||| | |||||| ||
Sbjct: 231 gtaagcgaatctctccaggaacttgaggcgccctccgtagccataccataaggggcaatg 172
Query: 999 ccggctgaagaggatctccacggacccaagagcccaccggagcacctggttcagacggtc 1058
||||||||| || || || ||||| |||||||||||||||||||| ||||||||||| ||
Sbjct: 171 ccggctgaaaagaatttcaacggaaccaagagcccaccggagcacttggttcagacgatc 112
Query: 1059 cgaaagattgatgggggcagaccccttgaaagctggccgcttgggcatgcagtaga 1114
|||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||
Sbjct: 111 tgaaagattgatgggggcagatcccttgaaagctgggcgcttaggcatgcaataga 56
>gb|CA012990.1|CA012990 HT07B01r HT Hordeum vulgare subsp. vulgare cDNA clone HT07B01
5-PRIME, mRNA sequence
Length = 579
Score = 410 bits (207), Expect = e-112
Identities = 475/563 (84%), Gaps = 1/563 (0%)
Strand = Plus / Minus
Query: 490 ctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtg 549
|||||||||||||||||| | || || ||||| ||||||| ||| ||||||| ||||||
Sbjct: 571 ctgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtc 512
Query: 550 gtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcc 609
|| || ||||| || ||||||||||||||||||||||| ||||| || |||||||| ||
Sbjct: 511 gtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttct 452
Query: 610 tcgtccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagc 669
||||| ||||| |||||||| ||||||||||||||||| ||||| |||||||| ||
Sbjct: 451 tcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcaga 392
Query: 670 aggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcg 729
|| ||||| || ||||| || || || || ||||| || || || ||||||||||| ||
Sbjct: 391 agaccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttca 332
Query: 730 ttcctccaccactcgtcgatgcccaccccgctccacctcatctccaggatgcccgtggcg 789
||||||||||||||||| ||||| || || |||||||||||||| ||||| || |||||
Sbjct: 331 ttcctccaccactcgtcaatgccaacaccactccacctcatctcaaggataccggtggca 272
Query: 790 aagatcgagatgaagagggagatgaaccagatgctggcgaagttgctgatctctggaatg 849
|| || || | |||||| | ||||||||||| ||||| |||||||| |||||||| |||
Sbjct: 271 aaaattgaaaggaagagagcaatgaaccagatactggccaagttgctaatctctggcatg 212
Query: 850 atgaactttccggtgagcagacagatggcgggcaggatgcagtagatgagaagcgggatg 909
||||||||||| ||||||| |||||| || |||| || || |||| ||||||||||
Sbjct: 211 atgaactttccagtgagcaaacagatagcaggcaatatacaatagactagaagcgggaga 152
Query: 910 gacgtgagcgggtagatggtggtgttgatgtacgcgaatctctccaggaacttgagccgc 969
||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 151 gacgttagtgggtaaatggtggtgttgatgtaagcgaatctctccaggaacttgaggcgc 92
Query: 970 cctccgtagccgtaccacagggggcagtgccggctgaagaggatctccacggacccaaga 1029
||||||||||| ||||| | |||||| ||||||||||| || || || ||||| ||||||
Sbjct: 91 cctccgtagccataccataaggggcaatgccggctgaaaagaatttcaacggaaccaaga 32
Query: 1030 gcccaccggagcacctggttcag 1052
||||||||||||| |||||||||
Sbjct: 31 gcccaccggagca-ctggttcag 10
>gb|BF259426.2|BF259426 HVSMEf0019B07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0019B07f, mRNA sequence
Length = 755
Score = 402 bits (203), Expect = e-110
Identities = 482/572 (84%), Gaps = 5/572 (0%)
Strand = Plus / Minus
Query: 1132 gcgtgcatcttgaatccggtgagaatgtcttctgtcacagaaccgtagatccacccgatc 1191
||||||||||||| ||| ||||||| | |||||| |||| || || |||| || |||
Sbjct: 753 gcgtgcatcttgattccagtgagaaaattttctgtgccagatccataattccaaccaatc 694
Query: 1192 tcagttccccattcagtcttgtcctcatagccacagcttataacatggatagcttctttc 1251
||||||||||| |||| |||||| ||||||||||| ||||| ||||||||||||| ||||
Sbjct: 693 tcagttccccactcagacttgtcttcatagccacaacttatgacatggatagctt-tttc 635
Query: 1252 agaagagactccggagttgcggactgaggaacaccaccatactccatcagagtggaggca 1311
| |||||| || ||||| | ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 634 aaaagagattctggagtggaggactgaggaacaccaccatattccatcagagtggaggca 575
Query: 1312 acaaacgctgcggactggccaaatctcttctccaggctcatttgagacataagaagtgat 1371
||||| ||||| ||||||| |||| ||||||| | ||||||||||||||| |||| ||||
Sbjct: 574 acaaatgctgctgactggc-aaatttcttctctaagctcatttgagacatgagaactgat 516
Query: 1372 ttctcgtcgtcaaatccagcgccttcaactccctcctctatatcttcaaggttgaatact 1431
||||| || ||||| ||||| |||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 515 ttctcatcatcaaacccagcaccttcaacaccctcctctatgtcttcaagattgaacact 456
Query: 1432 ggcacagaactgtccacatgcttctgcgacttcttcttgtccgagccc---ttctttgat 1488
| ||||||||||| |||||||| | ||||| ||||| || |||| | ||||||||
Sbjct: 455 gcaacagaactgtcgacatgcttgtttgactttttcttatctgagctccttttctttgac 396
Query: 1489 ttgcttgccttcttcctaccgccacatagtgatgacaagaaaccacccttcttctgctta 1548
|||||||||||| || | || ||||| ||||||| |||||||| ||| ||| ||||
Sbjct: 395 ttgcttgccttcatcttgcccccacacagtgatgccaagaaacttggcttattcgcctta 336
Query: 1549 attgggggctcataaccatatagagctgttcggttgaaaacacagccagttccgacataa 1608
|| ||||| ||||||||||| | ||| |||| |||||||||||| ||||||||||||||
Sbjct: 335 atcgggggttcataaccatagatagccgttctgttgaaaacacaagcagttccgacataa 276
Query: 1609 actggtccttggatgccatcaagacctctcaagttaataccgaaaaacacggtgttcctg 1668
|||| ||||| ||||||| || | |||||||||||| | ||||| || |||||||||
Sbjct: 275 gctggcccttgagtgccatcnaggcacctcaagttaatatcaaaaaagacagtgttcctg 216
Query: 1669 ttggcatatcgatcattcctgtcaatgccatc 1700
|||||||||||||||||||| ||||| |||||
Sbjct: 215 ttggcatatcgatcattcctatcaataccatc 184
Score = 192 bits (97), Expect = 6e-047
Identities = 130/141 (92%)
Strand = Plus / Minus
Query: 1740 taggttagggtccataaggaagcacatagcttccctgagagccttactgttgttaatgta 1799
|||||| || ||||| ||||||||||||||||||| || |||||| |||||||| |||||
Sbjct: 144 taggtttggatccattaggaagcacatagcttcccggacagccttgctgttgttgatgta 85
Query: 1800 gtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgagacacgaac 1859
|||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 84 gtgatcacaatcaagattcaacatgtattgtccattagtaaggacagccgagacacgaac 25
Query: 1860 aagagcattcatggcaccagc 1880
||| |||||||||||||||||
Sbjct: 24 aagggcattcatggcaccagc 4
>gb|BM442929.2|BM442929 EBro02_SQ001_O08_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_O08 5', mRNA sequence
Length = 463
Score = 398 bits (201), Expect = e-109
Identities = 396/459 (86%), Gaps = 4/459 (0%)
Strand = Plus / Minus
Query: 1228 cttataacatggatagcttctttcagaagagactccggagttgcggactgaggaacacc- 1286
||||| ||||||||||||||||||| |||||| || ||||| | |||||||||||||||
Sbjct: 459 cttatgacatggatagcttctttcaaaagagattctggagtggaggactgaggaacaccc 400
Query: 1287 accatactccatcagagtggaggcaacaaacgctgcggactggccaaatctcttctccag 1346
|||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 399 accatattccatcagagtggaggcaacaaatgctgctgactggccaaatctcttctctaa 340
Query: 1347 gctcatttgagacataagaagtgatttctcgtcgtcaaatccagcgccttcaactccctc 1406
||||||||||||||| |||| ||||||||| || ||||| ||||| |||||||| |||||
Sbjct: 339 gctcatttgagacatgagaactgatttctcatcatcaaacccagcaccttcaacaccctc 280
Query: 1407 ctctatatcttcaaggttgaatactggcacagaactgtccacatgcttctgcgacttctt 1466
|||||| |||||||| ||||| ||||| ||||||||||| |||||||| | ||||| ||
Sbjct: 279 ctctatgtcttcaagattgaacactggaacagaactgtcgacatgcttgtttgacttttt 220
Query: 1467 cttgtccgagccc---ttctttgatttgcttgccttcttcctaccgccacatagtgatga 1523
||| || |||| | |||||||| ||||||||||||||| | || ||||| |||||||
Sbjct: 219 cttatctgagctccttttctttgacttgcttgccttcttcttgcccccacacagtgatgc 160
Query: 1524 caagaaaccacccttcttctgcttaattgggggctcataaccatatagagctgttcggtt 1583
|||||||| ||||||| |||||| ||||| ||||||||||| | ||| |||| |||
Sbjct: 159 caagaaacttggcttcttcgccttaatcgggggttcataaccatagatagccgttctgtt 100
Query: 1584 gaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaagtt 1643
||||||||| |||||||| ||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 99 gaaaacacaaccagttcccacataaactggcccttgaatgccatcaaggcccctcaagtt 40
Query: 1644 aataccgaaaaacacggtgttcctgttggcatatcgatc 1682
|||| | ||||| || ||||||||||| |||||||||||
Sbjct: 39 aatatcaaaaaagacagtgttcctgttcgcatatcgatc 1
>gb|BM816139.1|BM816139 HC105G09_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC105G09_T3.ab1 similar to (AF200528) cellulose
synthase-4 [Zea mays],(AF200529) cellulose synthase-5
[Zea mays],(AF200533) cellulose synthase-9 [Zea
mays],cellulose synthase catalytic subunit [Arabidopsis
thaliana],unnamed protein product [Arabidopsis
thaliana],, mRNA sequence
Length = 916
Score = 391 bits (197), Expect = e-106
Identities = 510/613 (83%), Gaps = 1/613 (0%)
Strand = Plus / Minus
Query: 256 tagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggtcg 315
||||||||||||||||| || ||| ||| ||||||| || || || ||||| || ||
Sbjct: 641 tagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggatca 582
Query: 316 atgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatg 375
| ||||||||||||||||||||||| || ||||| |||| |||||||||| ||| ||
Sbjct: 581 acacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatc 522
Query: 376 gtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacgatg 435
||||| |||||||| ||||||||||| || ||||||||||| ||||| | ||| || ||
Sbjct: 521 gtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaatc 462
Query: 436 acccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgttg 495
||||||||||| ||||||||||| ||||||||||| ||||| || ||||| || ||||||
Sbjct: 461 acccagaaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttg 402
Query: 496 atggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgggc 555
|||||||||||| | || || ||||| ||||||| ||| ||||||| |||||| || ||
Sbjct: 401 atggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcgga 342
Query: 556 gggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgtcc 615
||||| || ||||||||||||||||||||||| ||||| || |||||||| || |||||
Sbjct: 341 gggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtca 282
Query: 616 gaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccc 675
||||| |||||||| ||||||||||||||||| ||||| |||||||| || || |||
Sbjct: 281 ttagcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccc 222
Query: 676 tggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctc 735
|| || ||||| || || || || ||||| || || || ||||||||||| || ||||||
Sbjct: 221 tgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctc 162
Query: 736 caccactcgtcgatgcccaccccgctccacctcatctccaggatgcccgtggcgaagatc 795
||||||||||| ||||| || || |||||||||||||| ||||| || ||||| || ||
Sbjct: 161 caccactcgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaaatt 102
Query: 796 gagatgaagagggagatgaaccagatgctggcgaagttgctgatctctggaatgatgaac 855
|| | |||||| | ||||||||||| ||||| |||||||| |||||||| | |||||||
Sbjct: 101 gaaaggaagagagcaatgaaccagatactggccaagttgctaatctctggca-gatgaac 43
Query: 856 tttccggtgagca 868
||||| |||||||
Sbjct: 42 tttccagtgagca 30
>gb|BU986849.1|BU986849 HF13B10r HF Hordeum vulgare subsp. vulgare cDNA clone HF13B10
5-PRIME, mRNA sequence
Length = 622
Score = 383 bits (193), Expect = e-104
Identities = 466/557 (83%)
Strand = Plus / Minus
Query: 316 atgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatg 375
||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||||
Sbjct: 622 atgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacgatg 563
Query: 376 gtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacgatg 435
||||| ||||||||||||| ||||| || ||||||||||| ||||||| ||||| ||
Sbjct: 562 gtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataatc 503
Query: 436 acccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgttg 495
||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||||
Sbjct: 502 acccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgttg 443
Query: 496 atggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgggc 555
|| ||||||||| | || || || || ||||| ||||||||||||| ||| || || ||
Sbjct: 442 atcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttggt 383
Query: 556 gggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgtcc 615
|||||||| || |||||||||||||||||||| ||||| || || || || |||||
Sbjct: 382 gggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgtcg 323
Query: 616 gaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccc 675
|| || || || ||||| |||||| ||||||||||||| || || ||||| || || ||
Sbjct: 322 gatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagacct 263
Query: 676 tggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctc 735
||||| || || || || || || || || || ||||| ||||||||||| || ||||||
Sbjct: 262 tggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcctc 203
Query: 736 caccactcgtcgatgcccaccccgctccacctcatctccaggatgcccgtggcgaagatc 795
||||||||||||||||| || ||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 202 caccactcgtcgatgccaacaccgctccacctcatctcaaggataccagtggcaaagatc 143
Query: 796 gagatgaagagggagatgaaccagatgctggcgaagttgctgatctctggaatgatgaac 855
|| || ||||| ||||| ||||| || ||||| | |||||| |||| ||| |||||||||
Sbjct: 142 gaaataaagagagagataaaccaaatactggcaatgttgctaatctgtgggatgatgaac 83
Query: 856 tttccggtgagcagaca 872
||||| ||||| |||||
Sbjct: 82 tttcccgtgagaagaca 66
>gb|CB876338.1|CB876338 HX10P19w HX Hordeum vulgare subsp. vulgare cDNA clone HX10P19
3-PRIME, mRNA sequence
Length = 616
Score = 381 bits (192), Expect = e-103
Identities = 438/520 (84%)
Strand = Plus / Plus
Query: 254 cctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggt 313
|||||||||||||||||||| | ||| |||| || |||||||| || |||||||| ||||
Sbjct: 93 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 152
Query: 314 cgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacga 373
||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||
Sbjct: 153 cgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacga 212
Query: 374 tggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacga 433
||||||| ||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 213 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 272
Query: 434 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgt 493
| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 273 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgt 332
Query: 494 tgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgg 553
|||| ||||||||| | || || || || ||||| ||||||||||||| ||| || || |
Sbjct: 333 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 392
Query: 554 gcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgt 613
| |||||||| || |||||||||||||||||||| ||||| || || || || ||||
Sbjct: 393 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 452
Query: 614 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggc 673
| || || || || ||||| |||||| ||||||||||||| || || ||||| || || |
Sbjct: 453 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 512
Query: 674 cctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcc 733
| ||||| || || || || || || || || || ||||| ||||||||||| || ||||
Sbjct: 513 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 572
Query: 734 tccaccactcgtcgatgcccaccccgctccacctcatctc 773
||||||||||||||||||| || |||||||||||||||||
Sbjct: 573 tccaccactcgtcgatgccaacaccgctccacctcatctc 612
>gb|BG414971.1|BG414971 HVSMEk0004I03f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0004I03f, mRNA sequence
Length = 634
Score = 379 bits (191), Expect = e-103
Identities = 436/518 (84%)
Strand = Plus / Minus
Query: 490 ctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtg 549
|||||||||||||||||| | || || ||||| ||||||| ||| ||||||| ||||||
Sbjct: 526 ctgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtc 467
Query: 550 gtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcc 609
|| || ||||| || ||||||||||||||||||||||| ||||| || ||||||| ||
Sbjct: 466 gtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcanagtcgccttct 407
Query: 610 tcgtccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagc 669
||||| ||||| |||||||| ||||||||||||||||| ||||| |||||||| ||
Sbjct: 406 tcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcaga 347
Query: 670 aggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcg 729
|| ||||| || ||||| || || || || ||||| || || || ||||||||||| ||
Sbjct: 346 agaccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttca 287
Query: 730 ttcctccaccactcgtcgatgcccaccccgctccacctcatctccaggatgcccgtggcg 789
||||||||||||||||| ||||| || || |||||||||||||| ||||| || |||||
Sbjct: 286 ttcctccaccactcgtcaatgccaacaccactccacctcatctcaaggataccggtggca 227
Query: 790 aagatcgagatgaagagggagatgaaccagatgctggcgaagttgctgatctctggaatg 849
|| || || | |||||| | ||||||||||| ||||| |||||||| |||||||| |||
Sbjct: 226 aaaattgaaaggaagagagcaatgaaccagatactggccaagttgctaatctctggcatg 167
Query: 850 atgaactttccggtgagcagacagatggcgggcaggatgcagtagatgagaagcgggatg 909
||||||||||| |||||||||||||| || |||| || || |||| ||||||||||
Sbjct: 166 atgaactttccagtgagcagacagattgcaggcaatatacaatagactagaagcgggaga 107
Query: 910 gacgtgagcgggtagatggtggtgttgatgtacgcgaatctctccaggaacttgagccgc 969
||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 106 gacgttagtgggtaaatggtggtgttgatgtaagcgaatctctccaggaacttgaggcgc 47
Query: 970 cctccgtagccgtaccacagggggcagtgccggctgaa 1007
||||||||||| ||||| | |||||| |||||||||||
Sbjct: 46 cctccgtagccataccataaggggcaatgccggctgaa 9
>gb|BI776485.2|BI776485 EBpi05_SQ001_J01_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ001_J01 5', mRNA sequence
Length = 518
Score = 371 bits (187), Expect = e-100
Identities = 433/515 (84%)
Strand = Plus / Minus
Query: 259 cagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggtcgatg 318
||||||||||||||| | ||| |||| || |||||||| || |||||||| |||||||||
Sbjct: 518 cagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggtcgatg 459
Query: 319 cgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatggtc 378
|||||||||||||||||||||||||| || || ||||||||||||||||| |||||||||
Sbjct: 458 cgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacgatggtc 399
Query: 379 ggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacgatgacc 438
|| ||||||||||||| ||||| || ||||||||||| ||||||| ||||| || |||
Sbjct: 398 ggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataatcacc 339
Query: 439 cagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgttgatg 498
|||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||||||
Sbjct: 338 cagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgttgatc 279
Query: 499 gcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgggcggg 558
||||||||| | || || || || ||||| ||||||||||||| ||| || || || |||
Sbjct: 278 gcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttggtggg 219
Query: 559 atcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgtccgag 618
||||| || |||||||||||||||||||| ||||| || || || || ||||| ||
Sbjct: 218 atcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgtcggat 159
Query: 619 gccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccctgg 678
|| || || ||||| |||||| ||||||||||||| || || ||||| || || || |||
Sbjct: 158 gcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagaccttgg 99
Query: 679 aacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctccac 738
|| || || || || || || || || || ||||| ||||||||||| || |||||||||
Sbjct: 98 aagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcctccac 39
Query: 739 cactcgtcgatgcccaccccgctccacctcatctc 773
|||||||||||||| || |||||||||||||||||
Sbjct: 38 cactcgtcgatgccaacaccgctccacctcatctc 4
>gb|AV914152.1|AV914152 AV914152 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4p09 5', mRNA sequence
Length = 583
Score = 369 bits (186), Expect = e-100
Identities = 435/518 (83%)
Strand = Plus / Minus
Query: 358 gcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaac 417
|||||||||| ||| || ||||| |||||||| ||||||||||| || |||||||||||
Sbjct: 578 gcccagacgatgacaatcgtcggtgtgcggttttgcctgcccataagacccttgaggaag 519
Query: 418 gggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccac 477
||||| | ||| || || ||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 518 gggtataagtgaacaatcacccagaaggcaaagaagagcttcccgaagagcggcccccaa 459
Query: 478 gactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgatg 537
|| ||||| || |||||||||||||||||| | || || ||||| ||||||| ||| |||
Sbjct: 458 gattggtaaccactgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatg 399
Query: 538 atcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgcg 597
|||| |||||| || || ||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 398 atcaagatggtcgtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagca 339
Query: 598 aagtcgccgtcctcgtccgaggccttggaggtgacggtgaagttggtgtcgatgccggcc 657
|||||||| || ||||| ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 338 aagtcgccttcttcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggca 279
Query: 658 agcaccttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacc 717
|||||||| || || ||||| || ||||| || || || || ||||| || || || |||
Sbjct: 278 agcaccttcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgacc 219
Query: 718 cagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctccagg 777
|||||||| || ||||||||||||||||| ||||| || || |||||||||||||| |||
Sbjct: 218 cagaactgttcattcctccaccactcgtcaatgccaacaccactccacctcatctcaagg 159
Query: 778 atgcccgtggcgaagatcgagatgaagagggagatgaaccagatgctggcgaagttgctg 837
|| || ||||| || || || | |||||| | ||||||||||| ||||| ||||||||
Sbjct: 158 ataccggtggcaaaaattgaaaggaagagagcaatgaaccagatactggccaagttgcta 99
Query: 838 atctctggaatgatgaactttccggtgagcagacagat 875
|||||||| |||||||||||||| ||||||| ||||||
Sbjct: 98 atctctggcatgatgaactttccagtgagcaaacagat 61
>gb|BQ739972.1|BQ739972 HB107G12 HB Hordeum vulgare subsp. vulgare cDNA clone HB107G12
similar to (AF200533) cellulose synthase-9 [Zea mays],
mRNA sequence
Length = 623
Score = 369 bits (186), Expect = e-100
Identities = 390/458 (85%)
Strand = Plus / Minus
Query: 715 acccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctcc 774
||||||||||| || |||||||||| || ||| ||||| || || ||||||||||| ||
Sbjct: 473 acccagaactgttctttcctccacccctggtcaatgccaacaccactccacctcatttca 414
Query: 775 aggatgcccgtggcgaagatcgagatgaagagggagatgaaccagatgctggcgaagttg 834
|| | || |||| || || || | |||||| | ||||||||||| ||||| ||||||
Sbjct: 413 agattaccgttggcaaaaattgaaaggaagagagcaatgaaccagatactggccaagttg 354
Query: 835 ctgatctctggaatgatgaactttccggtgagcagacagatggcgggcaggatgcagtag 894
|| |||||||| |||||||||||||| ||||||| |||||| || |||| || || |||
Sbjct: 353 ctaatctctggcatgatgaactttccagtgagcaaacagatagcaggcaatatacaatag 294
Query: 895 atgagaagcgggatggacgtgagcgggtagatggtggtgttgatgtacgcgaatctctcc 954
| |||||||||| ||||| || ||||| ||||||||||||||||| ||||||||||||
Sbjct: 293 actagaagcgggagagacgttagtgggtaaatggtggtgttgatgtaagcgaatctctcc 234
Query: 955 aggaacttgagccgccctccgtagccgtaccacagggggcagtgccggctgaagaggatc 1014
||||||||||| ||||||| |||||| ||||| | |||||| ||||||||||| || ||
Sbjct: 233 aggaacttgaggcgccctcggtagccataccataaggggcaatgccggctgaaaagaatt 174
Query: 1015 tccacggacccaagagcccaccggagcacctggttcagacggtccgaaagattgatgggg 1074
|| ||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 173 tcaacggaaccaagagcccaccggagcacttggttcagacgatctgaaagattgatgggg 114
Query: 1075 gcagaccccttgaaagctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcg 1134
||||| |||||||||||||| ||||| |||||||| |||| ||||||||||||| |||
Sbjct: 113 gcagatcccttgaaagctgggcgcttaggcatgcaatagactgaccgccagcctcttgcg 54
Query: 1135 tgcatcttgaatccggtgagaatgtcttctgtcacaga 1172
|||||||||||||| |||||||| |||||||| |||||
Sbjct: 53 tgcatcttgaatccagtgagaatatcttctgtgacaga 16
>gb|BJ464018.1|BJ464018 BJ464018 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31h15 5', mRNA sequence
Length = 419
Score = 361 bits (182), Expect = 1e-097
Identities = 356/413 (86%), Gaps = 1/413 (0%)
Strand = Plus / Minus
Query: 715 acccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctcc 774
||||||||||| || ||||||||||||||||| ||||| || || ||||||||||||||
Sbjct: 413 acccagaactgttcattcctccaccactcgtcaatgccaacaccactccacctcatctca 354
Query: 775 aggatgcccgtggcgaagatcgagatgaagagggagatgaaccagatgctggcgaagttg 834
||||| || ||||| || || || | |||||| | ||||||||||| ||||| ||||||
Sbjct: 353 aggataccggtggcaaaaattgaaaggaagagagcaatgaaccagatnctggccaagttg 294
Query: 835 ctgatctctggaatgatgaactttccggtgagcagacagatggcgggcaggatgcagtag 894
|| |||||||| |||||||||||||| ||||||| |||||| || |||| || || |||
Sbjct: 293 ctaatctctggcatgatgaactttccagtgagcaaacagatagcaggcaatatacaatag 234
Query: 895 atgagaagcgggatggacgtgagcgggtagatggtggtgttgatgtacgcgaatctctcc 954
| |||||||||| ||||| || ||||| ||||||||||||||||| ||||||||||||
Sbjct: 233 actagaagcgggagagacgttagtgggtaaatggtggtgttgatgtaagcgaatctctcc 174
Query: 955 -aggaacttgagccgccctccgtagccgtaccacagggggcagtgccggctgaagaggat 1013
||||||||||| |||||||||||||| ||||| | |||||| ||||||||||| || ||
Sbjct: 173 caggaacttgaggcgccctccgtagccataccataaggggcaatgccggctgaaaagaat 114
Query: 1014 ctccacggacccaagagcccaccggagcacctggttcagacggtccgaaagattgatggg 1073
|| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 113 ttcaacggaaccaagagcccaccggagcacttggttcagacgatctgaaagattgatggg 54
Query: 1074 ggcagaccccttgaaagctggccgcttgggcatgcagtagatcgaccgccagc 1126
|||||| |||||||||||||| ||||| |||||||| |||| ||||||||||
Sbjct: 53 ggcagatcccttgaaagctgggcgcttaggcatgcaatagactgaccgccagc 1
>gb|AV925215.1|AV925215 AV925215 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22e04 5', mRNA sequence
Length = 656
Score = 357 bits (180), Expect = 2e-096
Identities = 432/516 (83%)
Strand = Plus / Minus
Query: 319 cgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatggtc 378
||||||||||||||||||||||| || ||||| |||| |||||||||| ||| || |||
Sbjct: 625 cgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtc 566
Query: 379 ggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacgatgacc 438
|| |||||||| ||||||||||| || ||||||||||| ||||| | ||| || || |||
Sbjct: 565 ggtgtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaatcacc 506
Query: 439 cagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgttgatg 498
|||||||| ||||||||||| ||||||||||| ||||| || ||||| || |||||||||
Sbjct: 505 cagaaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatg 446
Query: 499 gcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgggcggg 558
||||||||| | || || ||||| ||||||| ||| ||||||| |||||| || || |||
Sbjct: 445 gcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcggaggg 386
Query: 559 atcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgtccgag 618
|| || ||||||||||||||||||||||| ||||| || |||||||| || |||||
Sbjct: 385 atgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcatta 326
Query: 619 gccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccctgg 678
||||| |||||||| ||||||||||||||||| ||||| |||||||| || || |||||
Sbjct: 325 gcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctga 266
Query: 679 aacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctccac 738
|| ||||| || || || || ||||| || || || ||||||||||| || |||||||||
Sbjct: 265 aagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccac 206
Query: 739 cactcgtcgatgcccaccccgctccacctcatctccaggatgcccgtggcgaagatcgag 798
|||||||| ||||| || || |||||||||||||| ||||| || ||||| || || ||
Sbjct: 205 cactcgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaaattgaa 146
Query: 799 atgaagagggagatgaaccagatgctggcgaagttg 834
| |||||| | ||||||||||| ||||| ||||||
Sbjct: 145 aggaagagagcaatgaaccagatactggccaagttg 110
>gb|CA023762.1|CA023762 HZ47F10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47F10
5-PRIME, mRNA sequence
Length = 404
Score = 355 bits (179), Expect = 7e-096
Identities = 337/389 (86%), Gaps = 3/389 (0%)
Strand = Plus / Minus
Query: 1180 atccacccgatctcagttccccattcagtcttgtcctcatagccacagcttataacatgg 1239
||||| || |||||||||||||| |||| |||||||||||||||||| ||||| ||||||
Sbjct: 398 atccaaccaatctcagttccccactcagacttgtcctcatagccacaacttatgacatgg 339
Query: 1240 atagcttctttcagaagagactccggagttgcggactgaggaacaccaccatactccatc 1299
||||||||||||| |||||| || ||||| | ||||||||||||||||||||| ||||||
Sbjct: 338 atagcttctttcaaaagagattctggagtggaggactgaggaacaccaccatattccatc 279
Query: 1300 agagtggaggcaacaaacgctgcggactggccaaatctcttctccaggctcatttgagac 1359
||||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||
Sbjct: 278 agagtggaggcaacaaatgctgctgactggccaaatctcttctctaagctcatttgagac 219
Query: 1360 ataagaagtgatttctcgtcgtcaaatccagcgccttcaactccctcctctatatcttca 1419
|| |||| ||||||||| || ||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 218 atgagaactgatttctcatcatcaaacccagcaccttcaacaccctcctctatgtcttca 159
Query: 1420 aggttgaatactggcacagaactgtccacatgcttctgcgacttcttcttgtccgagccc 1479
|| ||||| ||||| ||||||||||| |||||||| | ||||| ||||| || |||| |
Sbjct: 158 agattgaacactggaacagaactgtcgacatgcttgtttgactttttcttatctgagctc 99
Query: 1480 ---ttctttgatttgcttgccttcttcctaccgccacatagtgatgacaagaaaccaccc 1536
|||||||| ||||||||||||||| | || ||||| ||||||| |||||||| |
Sbjct: 98 cttttctttgacttgcttgccttcttcttgcccccacacagtgatgccaagaaacttggc 39
Query: 1537 ttcttctgcttaattgggggctcataacc 1565
|||||| |||||| ||||| ||||||||
Sbjct: 38 ttcttcgccttaatcgggggttcataacc 10
>gb|CB860194.1|CB860194 HI12P13w HI Hordeum vulgare subsp. vulgare cDNA clone HI12P13
3-PRIME, mRNA sequence
Length = 651
Score = 355 bits (179), Expect = 7e-096
Identities = 419/499 (83%)
Strand = Plus / Plus
Query: 254 cctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggt 313
|||||||||||||||||||| | ||| |||| || |||||||| || |||||||| ||||
Sbjct: 150 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 209
Query: 314 cgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacga 373
||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||
Sbjct: 210 cgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacga 269
Query: 374 tggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacga 433
||||||| ||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 270 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 329
Query: 434 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgt 493
| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 330 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgt 389
Query: 494 tgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgg 553
|||| ||||||||| | || || || || ||||| ||||||||||||| ||| || || |
Sbjct: 390 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 449
Query: 554 gcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgt 613
| |||||||| || |||||||||||||||||||| ||||| || || || || ||||
Sbjct: 450 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 509
Query: 614 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggc 673
| || || || || ||||| |||||| ||||||||||||| || || ||||| || || |
Sbjct: 510 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 569
Query: 674 cctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcc 733
| ||||| || || || || || || || || || ||||| ||||||||||| || ||||
Sbjct: 570 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 629
Query: 734 tccaccactcgtcgatgcc 752
|||||||||||||||||||
Sbjct: 630 tccaccactcgtcgatgcc 648
>gb|AV931092.1|AV931092 AV931092 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18i05 3', mRNA sequence
Length = 658
Score = 351 bits (177), Expect = 1e-094
Identities = 426/509 (83%)
Strand = Plus / Plus
Query: 254 cctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggt 313
|||||||||||||||||||| | ||| |||| || |||||||| || |||||||| ||||
Sbjct: 150 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 209
Query: 314 cgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacga 373
||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||
Sbjct: 210 cgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacga 269
Query: 374 tggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacga 433
||||||| ||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 270 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 329
Query: 434 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgt 493
| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || ||| |||
Sbjct: 330 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgatgt 389
Query: 494 tgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgg 553
|||| ||||||||| | || || || || ||||| ||||||||||||| ||| || || |
Sbjct: 390 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 449
Query: 554 gcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgt 613
| |||||||| || |||||||||||||||||||| ||||| || || || || ||||
Sbjct: 450 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 509
Query: 614 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggc 673
| || || || || ||||| |||||| ||||||||||||| || || ||||| || || |
Sbjct: 510 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 569
Query: 674 cctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcc 733
| ||||| || || || || || || || || || ||||| ||||||||||| || ||||
Sbjct: 570 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 629
Query: 734 tccaccactcgtcgatgcccaccccgctc 762
||||||||||||||||||| || ||||||
Sbjct: 630 tccaccactcgtcgatgccaacaccgctc 658
>gb|BU967242.1|BU967242 HB03K11r BC Hordeum vulgare subsp. vulgare cDNA clone HB03K11
5-PRIME, mRNA sequence
Length = 577
Score = 351 bits (177), Expect = 1e-094
Identities = 417/497 (83%)
Strand = Plus / Minus
Query: 254 cctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggt 313
|||||||||||||||||||| | ||| |||| || |||||||| || |||||||| ||||
Sbjct: 517 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 458
Query: 314 cgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacga 373
||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||
Sbjct: 457 cgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacga 398
Query: 374 tggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacga 433
||||||| ||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 397 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 338
Query: 434 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgt 493
| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 337 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgt 278
Query: 494 tgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgg 553
|||| ||||||||| | || || || || ||||| ||||||||||||| ||| || || |
Sbjct: 277 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 218
Query: 554 gcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgt 613
| |||||||| || |||||||||||||||||||| ||||| || || || || ||||
Sbjct: 217 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 158
Query: 614 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggc 673
| || || || || ||||| |||||| ||||||||||||| || || ||||| || || |
Sbjct: 157 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 98
Query: 674 cctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcc 733
| ||||| || || || || || || || || || ||||| ||||||||||| || ||||
Sbjct: 97 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 38
Query: 734 tccaccactcgtcgatg 750
|||||||||||||||||
Sbjct: 37 tccaccactcgtcgatg 21
>gb|AV931093.1|AV931093 AV931093 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18i06 3', mRNA sequence
Length = 658
Score = 347 bits (175), Expect = 2e-093
Identities = 418/499 (83%)
Strand = Plus / Plus
Query: 254 cctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggt 313
|||||||||||||||||||| | ||| |||| || |||||||| || |||||||| ||||
Sbjct: 157 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 216
Query: 314 cgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacga 373
||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||
Sbjct: 217 cgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacga 276
Query: 374 tggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacga 433
||||||| ||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 277 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 336
Query: 434 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgt 493
| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || ||| |||
Sbjct: 337 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgatgt 396
Query: 494 tgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgg 553
|||| ||||||||| | || || || || ||||| ||||||||||||| ||| || || |
Sbjct: 397 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 456
Query: 554 gcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgt 613
| |||||||| || |||||||||||||||||||| ||||| || || || || ||||
Sbjct: 457 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 516
Query: 614 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggc 673
| || || || || ||||| |||||| ||||||||||||| || || ||||| || || |
Sbjct: 517 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 576
Query: 674 cctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcc 733
| ||||| || || || || || || || || || ||||| ||||||||||| || ||||
Sbjct: 577 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 636
Query: 734 tccaccactcgtcgatgcc 752
|||||||||||||||||||
Sbjct: 637 tccaccactcgtcgatgcc 655
>gb|BU990492.1|BU990492 HF25D10r HF Hordeum vulgare subsp. vulgare cDNA clone HF25D10
5-PRIME, mRNA sequence
Length = 621
Score = 335 bits (169), Expect = 6e-090
Identities = 427/513 (83%)
Strand = Plus / Minus
Query: 254 cctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggt 313
||||||||||||||||||| || ||| ||| ||||||| || || || ||||| || |
Sbjct: 522 cctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggat 463
Query: 314 cgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacga 373
| | ||||||||||||||||||||||| || ||||| |||| |||||||||| ||| |
Sbjct: 462 caacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaa 403
Query: 374 tggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacga 433
| ||||| |||||||| ||||||||||| || ||||||||||| ||||| | ||| || |
Sbjct: 402 tcgtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaa 343
Query: 434 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgt 493
| ||||||||||| ||||||||||| ||||||||||| ||||| || ||||| || ||||
Sbjct: 342 tcacccagaaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgt 283
Query: 494 tgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgg 553
|||||||||||||| | || || ||||| ||||||| ||| ||||||| |||||| || |
Sbjct: 282 tgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcg 223
Query: 554 gcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgt 613
| ||||| || ||||||||||||||||||||||| ||||| || |||||||| || ||||
Sbjct: 222 gagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgt 163
Query: 614 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggc 673
| ||||| |||||||| ||||||||||||||||| ||||| |||||||| || || |
Sbjct: 162 cattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagac 103
Query: 674 cctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcc 733
|||| || ||||| || || || || ||||| || || || ||||||||||| || ||||
Sbjct: 102 cctgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcc 43
Query: 734 tccaccactcgtcgatgcccaccccgctccacc 766
||||||||||||| ||||| || || |||||||
Sbjct: 42 tccaccactcgtcaatgccaacaccactccacc 10
>gb|AV913277.1|AV913277 AV913277 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21i03 5', mRNA sequence
Length = 631
Score = 321 bits (162), Expect = 1e-085
Identities = 408/490 (83%)
Strand = Plus / Minus
Query: 254 cctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggt 313
||||||||||||||||||| || ||| ||| ||||||| || || || ||||| || |
Sbjct: 502 cctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggat 443
Query: 314 cgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacga 373
| | ||||||||||||||||||||||| || ||||| |||| |||||||||| ||| |
Sbjct: 442 caacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaa 383
Query: 374 tggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacga 433
| ||||| |||||||| ||||||||||| || ||||||||||| ||||| | ||| || |
Sbjct: 382 tcgtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaa 323
Query: 434 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgt 493
| ||||||||||| ||||||||||| ||||||||||| ||||| || ||||| || ||||
Sbjct: 322 tcacccagaaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgt 263
Query: 494 tgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgg 553
|||||||||||||| | || || ||||| ||||||| ||| ||||||| |||||| || |
Sbjct: 262 tgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcg 203
Query: 554 gcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgt 613
| ||||| || ||||||||||||||||||||||| ||||| || |||||||| || ||||
Sbjct: 202 gagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgt 143
Query: 614 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggc 673
| ||||| |||||||| ||||||||||||||||| ||||| |||||||| || || |
Sbjct: 142 cattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagac 83
Query: 674 cctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcc 733
|||| || ||||| || || || || ||||| || || || ||||||||||| || ||||
Sbjct: 82 cctgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcc 23
Query: 734 tccaccactc 743
||||||||||
Sbjct: 22 tccaccactc 13
>gb|AV913278.1|AV913278 AV913278 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21i04 5', mRNA sequence
Length = 604
Score = 321 bits (162), Expect = 1e-085
Identities = 408/490 (83%)
Strand = Plus / Minus
Query: 254 cctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtggtgaaggggt 313
||||||||||||||||||| || ||| ||| ||||||| || || || ||||| || |
Sbjct: 501 cctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggat 442
Query: 314 cgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacga 373
| | ||||||||||||||||||||||| || ||||| |||| |||||||||| ||| |
Sbjct: 441 caacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaa 382
Query: 374 tggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacga 433
| ||||| |||||||| ||||||||||| || ||||||||||| ||||| | ||| || |
Sbjct: 381 tcgtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaa 322
Query: 434 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgctgt 493
| ||||||||||| ||||||||||| ||||||||||| ||||| || ||||| || ||||
Sbjct: 321 tcacccagaaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgt 262
Query: 494 tgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatggtggtgg 553
|||||||||||||| | || || ||||| ||||||| ||| ||||||| |||||| || |
Sbjct: 261 tgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcg 202
Query: 554 gcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcctcgt 613
| ||||| || ||||||||||||||||||||||| ||||| || |||||||| || ||||
Sbjct: 201 gagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgt 142
Query: 614 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggc 673
| ||||| |||||||| ||||||||||||||||| ||||| |||||||| || || |
Sbjct: 141 cattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagac 82
Query: 674 cctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcc 733
|||| || ||||| || || || || ||||| || || || ||||||||||| || ||||
Sbjct: 81 cctgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcc 22
Query: 734 tccaccactc 743
||||||||||
Sbjct: 21 tccaccactc 12
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 434,572
Number of Sequences: 312970
Number of extensions: 434572
Number of successful extensions: 129556
Number of sequences better than 0.5: 184
Number of HSP's better than 0.5 without gapping: 183
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 128966
Number of HSP's gapped (non-prelim): 432
length of query: 3807
length of database: 175,134,539
effective HSP length: 20
effective length of query: 3787
effective length of database: 168,875,139
effective search space: 639530151393
effective search space used: 639530151393
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)