BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3203235.2.1
(637 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL507983.1|AL507983 AL507983 Hordeum vulgare Barke devel... 48 4e-004
gb|BI777157.2|BI777157 EBro03_SQ002_D07_R root, 3 week, wat... 40 0.086
gb|BE420960.1|BE420960 HWM004.D01 ITEC HWM Barley Leaf Libr... 38 0.34
gb|BE421503.1|BE421503 HWM010.A04 ITEC HWM Barley Leaf Libr... 38 0.34
gb|AL450630.1|AL450630 AL450630 Hordeum vulgare Barke etiol... 38 0.34
gb|AL509046.1|AL509046 AL509046 Hordeum vulgare Barke devel... 38 0.34
gb|AL509959.1|AL509959 AL509959 Hordeum vulgare Barke devel... 38 0.34
gb|AV836629.1|AV836629 AV836629 K. Sato unpublished cDNA li... 38 0.34
gb|BE193620.1|BE193620 HVSMEh0082A05f Hordeum vulgare 5-45 ... 38 0.34
gb|BE194127.1|BE194127 HVSMEh0084C18f Hordeum vulgare 5-45 ... 38 0.34
gb|BE195102.1|BE195102 HVSMEh0088E20f Hordeum vulgare 5-45 ... 38 0.34
gb|BE196388.1|BE196388 HVSMEh0092C15f Hordeum vulgare 5-45 ... 38 0.34
gb|BE602522.1|BE602522 HVSMEh0099J12f Hordeum vulgare 5-45 ... 38 0.34
gb|BF631354.1|BF631354 HVSMEb0015L05f Hordeum vulgare seedl... 38 0.34
gb|BE455474.2|BE455474 HVSMEg0017F13f Hordeum vulgare pre-a... 38 0.34
gb|BE194874.2|BE194874 HVSMEh0087F18f Hordeum vulgare 5-45 ... 38 0.34
gb|BE195295.2|BE195295 HVSMEh0088N09f Hordeum vulgare 5-45 ... 38 0.34
gb|BE454792.2|BE454792 HVSMEh0095B10f Hordeum vulgare 5-45 ... 38 0.34
gb|BE455264.2|BE455264 HVSMEh0096N06f Hordeum vulgare 5-45 ... 38 0.34
gb|BE602397.2|BE602397 HVSMEh0098L23f Hordeum vulgare 5-45 ... 38 0.34
gb|BE602445.2|BE602445 HVSMEh0098P01f Hordeum vulgare 5-45 ... 38 0.34
gb|BE602067.2|BE602067 HVSMEh0102E15f Hordeum vulgare 5-45 ... 38 0.34
gb|BE602176.2|BE602176 HVSMEh0102O08f Hordeum vulgare 5-45 ... 38 0.34
gb|BG354062.1|BG354062 HVSMEh0090E16f Hordeum vulgare 5-45 ... 38 0.34
gb|BG365290.1|BG365290 HVSMEi0002C23f Hordeum vulgare 20 DA... 38 0.34
gb|BG365300.1|BG365300 HVSMEi0002D13f Hordeum vulgare 20 DA... 38 0.34
gb|BG366089.1|BG366089 HVSMEi0005K16f Hordeum vulgare 20 DA... 38 0.34
gb|BG366689.1|BG366689 HVSMEi0007O01f Hordeum vulgare 20 DA... 38 0.34
gb|BG366820.1|BG366820 HVSMEi0008H19f Hordeum vulgare 20 DA... 38 0.34
gb|BG368003.1|BG368003 HVSMEi0015D20f Hordeum vulgare 20 DA... 38 0.34
gb|BG368311.1|BG368311 HVSMEi0017J17f Hordeum vulgare 20 DA... 38 0.34
gb|BI946994.1|BI946994 HVSMEl0003C06f Hordeum vulgare spike... 38 0.34
gb|BI947067.1|BI947067 HVSMEl0003I04f Hordeum vulgare spike... 38 0.34
gb|BI947246.1|BI947246 HVSMEl0004K12f Hordeum vulgare spike... 38 0.34
gb|BI947406.1|BI947406 HVSMEl0005G03f Hordeum vulgare spike... 38 0.34
gb|BI947604.1|BI947604 HVSMEl0006B03f Hordeum vulgare spike... 38 0.34
gb|BI947828.1|BI947828 HVSMEl0007B22f Hordeum vulgare spike... 38 0.34
gb|BI947829.1|BI947829 HVSMEl0007B23f Hordeum vulgare spike... 38 0.34
gb|BI948610.1|BI948610 HVSMEl0010D24f Hordeum vulgare spike... 38 0.34
gb|BI948713.1|BI948713 HVSMEl0010J11f Hordeum vulgare spike... 38 0.34
gb|BI948764.1|BI948764 HVSMEl0010L22f Hordeum vulgare spike... 38 0.34
gb|BI948783.1|BI948783 HVSMEl0010M21f Hordeum vulgare spike... 38 0.34
gb|BI948813.1|BI948813 HVSMEl0010O13f Hordeum vulgare spike... 38 0.34
gb|BI948905.1|BI948905 HVSMEl0011G01f Hordeum vulgare spike... 38 0.34
gb|BI948927.1|BI948927 HVSMEl0011I04f Hordeum vulgare spike... 38 0.34
gb|BI948940.1|BI948940 HVSMEl0011J15f Hordeum vulgare spike... 38 0.34
gb|BI949042.1|BI949042 HVSMEl0012C06f Hordeum vulgare spike... 38 0.34
gb|BI949043.1|BI949043 HVSMEl0012C08f Hordeum vulgare spike... 38 0.34
gb|BI949050.1|BI949050 HVSMEl0012C19f Hordeum vulgare spike... 38 0.34
gb|BI949098.1|BI949098 HVSMEl0012F24f Hordeum vulgare spike... 38 0.34
gb|BI949127.1|BI949127 HVSMEl0012H18f Hordeum vulgare spike... 38 0.34
gb|BI949174.1|BI949174 HVSMEl0012K13f Hordeum vulgare spike... 38 0.34
gb|BI949289.1|BI949289 HVSMEl0013C18f Hordeum vulgare spike... 38 0.34
gb|BI949580.1|BI949580 HVSMEl0014L23f Hordeum vulgare spike... 38 0.34
gb|BI950045.1|BI950045 HVSMEl0018B01f Hordeum vulgare spike... 38 0.34
gb|BI950176.1|BI950176 HVSMEl0019E13f Hordeum vulgare spike... 38 0.34
gb|BI950199.1|BI950199 HVSMEl0019I05f Hordeum vulgare spike... 38 0.34
gb|BI950287.1|BI950287 HVSMEl0020B17f Hordeum vulgare spike... 38 0.34
gb|BI950736.1|BI950736 HVSMEl0023A10f Hordeum vulgare spike... 38 0.34
gb|BI951070.1|BI951070 HVSMEl0024E10f Hordeum vulgare spike... 38 0.34
gb|BI951097.1|BI951097 HVSMEl0024G11f Hordeum vulgare spike... 38 0.34
gb|BI951320.1|BI951320 HVSMEl0025I03f Hordeum vulgare spike... 38 0.34
gb|BI951342.1|BI951342 HVSMEl0025J12f Hordeum vulgare spike... 38 0.34
gb|BI951931.1|BI951931 HVSMEm0003M20f Hordeum vulgare green... 38 0.34
gb|BI952361.1|BI952361 HVSMEm0006B03f Hordeum vulgare green... 38 0.34
gb|BI952602.1|BI952602 HVSMEm0007B23f Hordeum vulgare green... 38 0.34
gb|BE213950.1|BE213950 HV_CEb0001L18f Hordeum vulgare seedl... 38 0.34
gb|BE559291.1|BE559291 HV_CEb0023H08f Hordeum vulgare seedl... 38 0.34
gb|BI959066.1|BI959066 HVSMEn0018A03f Hordeum vulgare rachi... 38 0.34
gb|BE230896.2|BE230896 HVSMEg0001I06f Hordeum vulgare pre-a... 38 0.34
gb|BF065794.2|BF065794 HV_CEb0014A06f Hordeum vulgare seedl... 38 0.34
gb|BE454104.3|BE454104 HVSMEh0080I12f Hordeum vulgare 5-45 ... 38 0.34
gb|BE454143.3|BE454143 HVSMEh0080O20f Hordeum vulgare 5-45 ... 38 0.34
gb|BE193579.3|BE193579 HVSMEh0081M08f Hordeum vulgare 5-45 ... 38 0.34
gb|BE193775.3|BE193775 HVSMEh0082H12f Hordeum vulgare 5-45 ... 38 0.34
gb|BE194093.3|BE194093 HVSMEh0083P17f Hordeum vulgare 5-45 ... 38 0.34
gb|BE194181.3|BE194181 HVSMEh0084H11f Hordeum vulgare 5-45 ... 38 0.34
gb|BE194198.3|BE194198 HVSMEh0084I24f Hordeum vulgare 5-45 ... 38 0.34
gb|BE194242.3|BE194242 HVSMEh0084M18f Hordeum vulgare 5-45 ... 38 0.34
gb|BE194663.3|BE194663 HVSMEh0086G17f Hordeum vulgare 5-45 ... 38 0.34
gb|BE194881.3|BE194881 HVSMEh0087G08f Hordeum vulgare 5-45 ... 38 0.34
gb|BE195059.3|BE195059 HVSMEh0088C24f Hordeum vulgare 5-45 ... 38 0.34
gb|BE195307.3|BE195307 HVSMEh0088N21f Hordeum vulgare 5-45 ... 38 0.34
gb|BE195370.3|BE195370 HVSMEh0089A19f Hordeum vulgare 5-45 ... 38 0.34
gb|BE195555.3|BE195555 HVSMEh0089G14f Hordeum vulgare 5-45 ... 38 0.34
gb|BE196170.3|BE196170 HVSMEh0091I20f Hordeum vulgare 5-45 ... 38 0.34
gb|BE196247.3|BE196247 HVSMEh0091M09f Hordeum vulgare 5-45 ... 38 0.34
gb|BE196533.3|BE196533 HVSMEh0092J01f Hordeum vulgare 5-45 ... 38 0.34
gb|BE196611.3|BE196611 HVSMEh0092M13f Hordeum vulgare 5-45 ... 38 0.34
gb|BE196674.3|BE196674 HVSMEh0092P06f Hordeum vulgare 5-45 ... 38 0.34
gb|BE454209.3|BE454209 HVSMEh0093E10f Hordeum vulgare 5-45 ... 38 0.34
gb|BE454210.3|BE454210 HVSMEh0093E12f Hordeum vulgare 5-45 ... 38 0.34
gb|BE454212.3|BE454212 HVSMEh0093E16f Hordeum vulgare 5-45 ... 38 0.34
gb|BE454401.3|BE454401 HVSMEh0093P18f Hordeum vulgare 5-45 ... 38 0.34
gb|BE454636.3|BE454636 HVSMEh0094N06f Hordeum vulgare 5-45 ... 38 0.34
gb|BE454674.3|BE454674 HVSMEh0094P22f Hordeum vulgare 5-45 ... 38 0.34
gb|BE454836.3|BE454836 HVSMEh0095D18f Hordeum vulgare 5-45 ... 38 0.34
gb|BE454897.3|BE454897 HVSMEh0095H07f Hordeum vulgare 5-45 ... 38 0.34
gb|BE601803.3|BE601803 HVSMEh0099J15f Hordeum vulgare 5-45 ... 38 0.34
gb|BE602605.3|BE602605 HVSMEh0100G13f Hordeum vulgare 5-45 ... 38 0.34
gb|BE602978.3|BE602978 HVSMEh0101F06f Hordeum vulgare 5-45 ... 38 0.34
gb|BE603143.3|BE603143 HVSMEh0102D07f Hordeum vulgare 5-45 ... 38 0.34
gb|BE603161.3|BE603161 HVSMEh0102F02f Hordeum vulgare 5-45 ... 38 0.34
gb|BE603276.3|BE603276 HVSMEh0102P02f Hordeum vulgare 5-45 ... 38 0.34
gb|BG365405.2|BG365405 HVSMEi0002J05f Hordeum vulgare 20 DA... 38 0.34
gb|BG366486.2|BG366486 HVSMEi0007D13f Hordeum vulgare 20 DA... 38 0.34
gb|BG366700.2|BG366700 HVSMEi0007O19f Hordeum vulgare 20 DA... 38 0.34
gb|BG366733.2|BG366733 HVSMEi0008A18f Hordeum vulgare 20 DA... 38 0.34
gb|BG367240.2|BG367240 HVSMEi0011G21f Hordeum vulgare 20 DA... 38 0.34
gb|BG367500.2|BG367500 HVSMEi0012H18f Hordeum vulgare 20 DA... 38 0.34
gb|BG368258.2|BG368258 HVSMEi0017D06f Hordeum vulgare 20 DA... 38 0.34
gb|BG368369.2|BG368369 HVSMEi0018A09f Hordeum vulgare 20 DA... 38 0.34
gb|BG368452.2|BG368452 HVSMEi0019A02f Hordeum vulgare 20 DA... 38 0.34
gb|BG368628.2|BG368628 HVSMEi0020A08f Hordeum vulgare 20 DA... 38 0.34
gb|BG368756.2|BG368756 HVSMEi0020I08f Hordeum vulgare 20 DA... 38 0.34
gb|BG369133.2|BG369133 HVSMEi0021N18f Hordeum vulgare 20 DA... 38 0.34
gb|BG369391.2|BG369391 HVSMEi0024D12f Hordeum vulgare 20 DA... 38 0.34
gb|BG369622.2|BG369622 HVSMEi0025D15f Hordeum vulgare 20 DA... 38 0.34
gb|BG415304.2|BG415304 HVSMEk0005P15f Hordeum vulgare testa... 38 0.34
gb|BG415344.2|BG415344 HVSMEk0006B23f Hordeum vulgare testa... 38 0.34
gb|BG415705.2|BG415705 HVSMEk0007I11f Hordeum vulgare testa... 38 0.34
gb|BG416297.2|BG416297 HVSMEk0011C07f Hordeum vulgare testa... 38 0.34
gb|BJ462867.1|BJ462867 BJ462867 K. Sato unpublished cDNA li... 38 0.34
gb|BM441229.2|BM441229 EBed02_SQ002_M15_R endosperm, 8 DPA,... 38 0.34
gb|BM441771.2|BM441771 EBed07_SQ001_I06_R endosperm, 28 DPA... 38 0.34
gb|BM441897.2|BM441897 EBed07_SQ001_N18_R endosperm, 28 DPA... 38 0.34
gb|BM096597.2|BM096597 EBem06_SQ001_P09_R embryo, 21 DPA, n... 38 0.34
gb|BM373493.2|BM373493 EBma04_SQ004_K10_R maternal, 10 DPA,... 38 0.34
gb|BM373526.2|BM373526 EBma04_SQ004_M07_R maternal, 10 DPA,... 38 0.34
gb|BM096643.2|BM096643 EBma07_SQ001_B07_R maternal, 21 DPA,... 38 0.34
gb|BM096715.2|BM096715 EBma07_SQ001_F23_R maternal, 21 DPA,... 38 0.34
gb|BI780108.2|BI780108 EBma08_SQ001_G21_R maternal, 28 DPA,... 38 0.34
gb|BM371458.2|BM371458 EBma08_SQ002_M24_R maternal, 28 DPA,... 38 0.34
gb|BM443126.2|BM443126 EBro02_SQ002_K13_R root, 3 week, hyd... 38 0.34
gb|BQ754544.1|BQ754544 EBed01_SQ003_B18_R endosperm, 6 DPA,... 38 0.34
gb|BQ755255.1|BQ755255 EBed07_SQ002_I06_R endosperm, 28 DPA... 38 0.34
gb|BQ755530.1|BQ755530 EBed07_SQ002_J24_R endosperm, 28 DPA... 38 0.34
gb|BQ758088.1|BQ758088 EBes01_SQ004_D05_R embryo sac, 4-6 D... 38 0.34
gb|BQ758502.1|BQ758502 EBma07_SQ001_D23_R maternal, 21 DPA,... 38 0.34
gb|BQ758662.1|BQ758662 EBma07_SQ002_N08_R maternal, 21 DPA,... 38 0.34
gb|BQ758767.1|BQ758767 EBma07_SQ002_B24_R maternal, 21 DPA,... 38 0.34
gb|BQ758806.1|BQ758806 EBma07_SQ002_J22_R maternal, 21 DPA,... 38 0.34
gb|BQ759106.1|BQ759106 EBma07_SQ003_E24_R maternal, 21 DPA,... 38 0.34
gb|BQ759197.1|BQ759197 EBma08_SQ003_L20_R maternal, 28 DPA,... 38 0.34
gb|BQ764494.1|BQ764494 EBca01_SQ004_E01_R carpel, pre-anthe... 38 0.34
gb|CA004113.1|CA004113 HS16J12r HS Hordeum vulgare subsp. v... 38 0.34
gb|CA026053.1|CA026053 HZ53P06r HZ Hordeum vulgare subsp. v... 38 0.34
gb|CA026405.1|CA026405 HZ55N05r HZ Hordeum vulgare subsp. v... 38 0.34
gb|CA028105.1|CA028105 HZ61A05r HZ Hordeum vulgare subsp. v... 38 0.34
gb|CA031117.1|CA031117 HX09B03r HX Hordeum vulgare subsp. v... 38 0.34
gb|CV059803.1|CV059803 BNEL51b3 Barley EST endosperm librar... 38 0.34
gb|CV060990.1|CV060990 BNEL63f6 Barley EST endosperm librar... 38 0.34
gb|CK122426.1|CK122426 BES1824103g11 BES1824 Hordeum vulgar... 38 0.34
gb|CK123910.1|CK123910 BES1824106b24 BES1824 Hordeum vulgar... 38 0.34
gb|CK124059.1|CK124059 BES1824106n16 BES1824 Hordeum vulgar... 38 0.34
gb|CK125578.1|CK125578 BES1824109b17 BES1824 Hordeum vulgar... 38 0.34
emb|X13198.1|TACMD Barley mRNA for seed protein CMd 38 0.34
emb|X69939.1|HVBTAI3 H.vulgare BTAI3 mRNA encoding CMd, com... 38 0.34
>gb|AL507983.1|AL507983 AL507983 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07G20V 5',
mRNA sequence
Length = 700
Score = 48.1 bits (24), Expect = 4e-004
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 198 aggccgccttcaaccagggtctcaacccctacgtctacatcacctaccgcca 249
|||| |||||||||||||| ||||| ||||||||| |||| |||||||||
Sbjct: 151 aggcggccttcaaccaggggttcaacacctacgtcttcatcttctaccgcca 202
>gb|BI777157.2|BI777157 EBro03_SQ002_D07_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_D07 5', mRNA sequence
Length = 244
Score = 40.1 bits (20), Expect = 0.086
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 618 ccggcagcggcagcggcggc 637
||||||||||||||||||||
Sbjct: 153 ccggcagcggcagcggcggc 172
>gb|BE420960.1|BE420960 HWM004.D01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.D01, mRNA sequence
Length = 1243
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 193 cggcagcggcagcggcggc 211
>gb|BE421503.1|BE421503 HWM010.A04 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM010.A04, mRNA sequence
Length = 842
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 96 cggcagcggcagcggcggc 114
>gb|AL450630.1|AL450630 AL450630 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03I08u 5', mRNA sequence
Length = 390
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 254 ctcgtcgccgtcctcatct 272
|||||||||||||||||||
Sbjct: 27 ctcgtcgccgtcctcatct 45
>gb|AL509046.1|AL509046 AL509046 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10I24V 5',
mRNA sequence
Length = 535
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 109 cggcagcggcagcggcggc 91
>gb|AL509959.1|AL509959 AL509959 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03G23u 3',
mRNA sequence
Length = 323
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 24 cggcagcggcagcggcggc 6
>gb|AV836629.1|AV836629 AV836629 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd19h15, mRNA
sequence
Length = 620
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 254 ctcgtcgccgtcctcatct 272
|||||||||||||||||||
Sbjct: 146 ctcgtcgccgtcctcatct 164
>gb|BE193620.1|BE193620 HVSMEh0082A05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082A05f, mRNA sequence
Length = 776
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 65 cggcagcggcagcggcggc 47
>gb|BE194127.1|BE194127 HVSMEh0084C18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0084C18f, mRNA sequence
Length = 651
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 106 cggcagcggcagcggcggc 88
>gb|BE195102.1|BE195102 HVSMEh0088E20f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088E20f, mRNA sequence
Length = 592
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 112 cggcagcggcagcggcggc 94
>gb|BE196388.1|BE196388 HVSMEh0092C15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092C15f, mRNA sequence
Length = 956
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 100 cggcagcggcagcggcggc 82
>gb|BE602522.1|BE602522 HVSMEh0099J12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099J12f, mRNA sequence
Length = 747
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 112 cggcagcggcagcggcggc 94
>gb|BF631354.1|BF631354 HVSMEb0015L05f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015L05f, mRNA sequence
Length = 760
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 50 cggcagcggcagcggcggc 68
>gb|BE455474.2|BE455474 HVSMEg0017F13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017F13f, mRNA sequence
Length = 589
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 61 cggcagcggcagcggcggc 43
>gb|BE194874.2|BE194874 HVSMEh0087F18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0087F18f, mRNA sequence
Length = 485
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 108 cggcagcggcagcggcggc 90
>gb|BE195295.2|BE195295 HVSMEh0088N09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088N09f, mRNA sequence
Length = 811
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 171 cggcagcggcagcggcggc 153
>gb|BE454792.2|BE454792 HVSMEh0095B10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095B10f, mRNA sequence
Length = 579
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 100 cggcagcggcagcggcggc 82
>gb|BE455264.2|BE455264 HVSMEh0096N06f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096N06f, mRNA sequence
Length = 705
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 105 cggcagcggcagcggcggc 87
>gb|BE602397.2|BE602397 HVSMEh0098L23f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098L23f, mRNA sequence
Length = 512
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 112 cggcagcggcagcggcggc 94
>gb|BE602445.2|BE602445 HVSMEh0098P01f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098P01f, mRNA sequence
Length = 510
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 113 cggcagcggcagcggcggc 95
>gb|BE602067.2|BE602067 HVSMEh0102E15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102E15f, mRNA sequence
Length = 669
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 110 cggcagcggcagcggcggc 92
>gb|BE602176.2|BE602176 HVSMEh0102O08f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102O08f, mRNA sequence
Length = 732
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 100 cggcagcggcagcggcggc 82
>gb|BG354062.1|BG354062 HVSMEh0090E16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090E16f, mRNA sequence
Length = 499
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 108 cggcagcggcagcggcggc 90
>gb|BG365290.1|BG365290 HVSMEi0002C23f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002C23f, mRNA sequence
Length = 819
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 100 cggcagcggcagcggcggc 82
>gb|BG365300.1|BG365300 HVSMEi0002D13f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002D13f, mRNA sequence
Length = 856
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 85 cggcagcggcagcggcggc 67
>gb|BG366089.1|BG366089 HVSMEi0005K16f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0005K16f, mRNA sequence
Length = 945
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 108 cggcagcggcagcggcggc 90
>gb|BG366689.1|BG366689 HVSMEi0007O01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0007O01f, mRNA sequence
Length = 501
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 201 cggcagcggcagcggcggc 183
>gb|BG366820.1|BG366820 HVSMEi0008H19f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0008H19f, mRNA sequence
Length = 509
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 99 cggcagcggcagcggcggc 81
>gb|BG368003.1|BG368003 HVSMEi0015D20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0015D20f, mRNA sequence
Length = 818
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 86 cggcagcggcagcggcggc 68
>gb|BG368311.1|BG368311 HVSMEi0017J17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0017J17f, mRNA sequence
Length = 753
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 72 cggcagcggcagcggcggc 54
>gb|BI946994.1|BI946994 HVSMEl0003C06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0003C06f, mRNA sequence
Length = 1064
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 111 cggcagcggcagcggcggc 93
>gb|BI947067.1|BI947067 HVSMEl0003I04f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0003I04f, mRNA sequence
Length = 1099
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 111 cggcagcggcagcggcggc 93
>gb|BI947246.1|BI947246 HVSMEl0004K12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0004K12f, mRNA sequence
Length = 824
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 108 cggcagcggcagcggcggc 90
>gb|BI947406.1|BI947406 HVSMEl0005G03f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005G03f, mRNA sequence
Length = 499
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 105 cggcagcggcagcggcggc 87
>gb|BI947604.1|BI947604 HVSMEl0006B03f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0006B03f, mRNA sequence
Length = 864
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 105 cggcagcggcagcggcggc 87
>gb|BI947828.1|BI947828 HVSMEl0007B22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0007B22f, mRNA sequence
Length = 591
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 111 cggcagcggcagcggcggc 93
>gb|BI947829.1|BI947829 HVSMEl0007B23f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0007B23f, mRNA sequence
Length = 859
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 102 cggcagcggcagcggcggc 84
>gb|BI948610.1|BI948610 HVSMEl0010D24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010D24f, mRNA sequence
Length = 869
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 111 cggcagcggcagcggcggc 93
>gb|BI948713.1|BI948713 HVSMEl0010J11f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010J11f, mRNA sequence
Length = 536
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 106 cggcagcggcagcggcggc 88
>gb|BI948764.1|BI948764 HVSMEl0010L22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010L22f, mRNA sequence
Length = 840
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 108 cggcagcggcagcggcggc 90
>gb|BI948783.1|BI948783 HVSMEl0010M21f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010M21f, mRNA sequence
Length = 827
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 97 cggcagcggcagcggcggc 79
>gb|BI948813.1|BI948813 HVSMEl0010O13f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010O13f, mRNA sequence
Length = 842
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 111 cggcagcggcagcggcggc 93
>gb|BI948905.1|BI948905 HVSMEl0011G01f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0011G01f, mRNA sequence
Length = 880
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 105 cggcagcggcagcggcggc 87
>gb|BI948927.1|BI948927 HVSMEl0011I04f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0011I04f, mRNA sequence
Length = 838
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 101 cggcagcggcagcggcggc 83
>gb|BI948940.1|BI948940 HVSMEl0011J15f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0011J15f, mRNA sequence
Length = 517
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 105 cggcagcggcagcggcggc 87
>gb|BI949042.1|BI949042 HVSMEl0012C06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012C06f, mRNA sequence
Length = 829
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 105 cggcagcggcagcggcggc 87
>gb|BI949043.1|BI949043 HVSMEl0012C08f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012C08f, mRNA sequence
Length = 858
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 111 cggcagcggcagcggcggc 93
>gb|BI949050.1|BI949050 HVSMEl0012C19f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012C19f, mRNA sequence
Length = 827
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 108 cggcagcggcagcggcggc 90
>gb|BI949098.1|BI949098 HVSMEl0012F24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012F24f, mRNA sequence
Length = 951
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 619 cggcagcggcagcggcggc 637
|||||||||||||||||||
Sbjct: 111 cggcagcggcagcggcggc 93
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 84,409
Number of Sequences: 312970
Number of extensions: 84409
Number of successful extensions: 24635
Number of sequences better than 0.5: 159
Number of HSP's better than 0.5 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24346
Number of HSP's gapped (non-prelim): 289
length of query: 637
length of database: 175,134,539
effective HSP length: 19
effective length of query: 618
effective length of database: 169,188,109
effective search space: 104558251362
effective search space used: 104558251362
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)