BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750463.2.1
(678 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotra... 507 e-142
gb|BQ467526.1|BQ467526 HS04B01r HS Hordeum vulgare subsp. v... 502 e-141
gb|BF260656.2|BF260656 HVSMEf0022J12f Hordeum vulgare seedl... 500 e-140
gb|BI960618.1|BI960618 HVSMEn0025G09f Hordeum vulgare rachi... 476 e-133
gb|BE060552.2|BE060552 HVSMEg0012J20f Hordeum vulgare pre-a... 468 e-130
gb|BU997685.1|BU997685 HI08L09r HI Hordeum vulgare subsp. v... 466 e-130
gb|BE455947.3|BE455947 HVSMEg0017N10f Hordeum vulgare pre-a... 464 e-129
gb|BF624089.2|BF624089 HVSMEa0009G06f Hordeum vulgare seedl... 440 e-122
gb|BQ467998.1|BQ467998 HR01J18r HR Hordeum vulgare subsp. v... 440 e-122
gb|BU997928.1|BU997928 HI09H06r HI Hordeum vulgare subsp. v... 440 e-122
gb|BQ460689.1|BQ460689 HA06D17r HA Hordeum vulgare subsp. v... 438 e-121
gb|CA007079.1|CA007079 HU06K21r HU Hordeum vulgare subsp. v... 432 e-120
gb|BI778475.2|BI778475 EBro07_SQ003_G13_R root, 3 week, red... 428 e-118
gb|BF260946.2|BF260946 HVSMEf0023F18f Hordeum vulgare seedl... 408 e-113
gb|BI957177.1|BI957177 HVSMEn0007P14f Hordeum vulgare rachi... 404 e-111
gb|BQ462594.1|BQ462594 HI01G12T HI Hordeum vulgare subsp. v... 385 e-105
gb|AL503674.1|AL503674 AL503674 Hordeum vulgare Barke roots... 373 e-102
gb|CA003718.1|CA003718 HS15F14r HS Hordeum vulgare subsp. v... 353 5e-096
gb|BQ662128.1|BQ662128 HR01K20u HR Hordeum vulgare subsp. v... 347 3e-094
gb|BQ467575.1|BQ467575 HS04D13r HS Hordeum vulgare subsp. v... 345 1e-093
gb|CA003908.1|CA003908 HS15O19r HS Hordeum vulgare subsp. v... 345 1e-093
gb|AL500460.1|AL500460 AL500460 Hordeum vulgare Barke etiol... 339 7e-092
gb|BF631278.2|BF631278 HVSMEb0015H17f Hordeum vulgare seedl... 339 7e-092
gb|BM370804.2|BM370804 EBro04_SQ002_F05_R root, 3 week, sal... 339 7e-092
gb|BQ764817.1|BQ764817 EBca01_SQ005_A06_R carpel, pre-anthe... 339 7e-092
gb|BF627738.2|BF627738 HVSMEb0005K17f Hordeum vulgare seedl... 325 1e-087
gb|CA001720.1|CA001720 HS05G04r HS Hordeum vulgare subsp. v... 325 1e-087
gb|CA023472.1|CA023472 HZ46F16r HZ Hordeum vulgare subsp. v... 325 1e-087
gb|BQ759958.1|BQ759958 EBpi05_SQ004_P23_R pistil, 8 DPA, no... 323 4e-087
gb|BF626739.2|BF626739 HVSMEb0001D16f Hordeum vulgare seedl... 319 7e-086
gb|BG300583.1|BG300583 HVSMEb0017J11f Hordeum vulgare seedl... 319 7e-086
gb|BG300865.1|BG300865 HVSMEb0018L19f Hordeum vulgare seedl... 319 7e-086
gb|BG309440.1|BG309440 HVSMEc0010E08f Hordeum vulgare seedl... 319 7e-086
gb|BG310036.1|BG310036 HVSMEc0016C04f Hordeum vulgare seedl... 319 7e-086
gb|BQ462941.1|BQ462941 HI02H24r HI Hordeum vulgare subsp. v... 313 4e-084
gb|BQ764772.1|BQ764772 EBca01_SQ004_H24_R carpel, pre-anthe... 313 4e-084
gb|AL450913.1|AL450913 AL450913 Hordeum vulgare Barke etiol... 311 2e-083
gb|BQ462553.1|BQ462553 HI01E04T HI Hordeum vulgare subsp. v... 311 2e-083
gb|BF628380.2|BF628380 HVSMEb0003O02f Hordeum vulgare seedl... 309 6e-083
emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotra... 309 6e-083
gb|AL500129.1|AL500129 AL500129 Hordeum vulgare Barke etiol... 307 3e-082
gb|AL450643.1|AL450643 AL450643 Hordeum vulgare Barke etiol... 303 4e-081
gb|BF629930.2|BF629930 HVSMEb0007F19f Hordeum vulgare seedl... 301 2e-080
gb|CA020574.1|CA020574 HZ36L09r HZ Hordeum vulgare subsp. v... 299 6e-080
gb|CA027653.1|CA027653 HZ59J16r HZ Hordeum vulgare subsp. v... 299 6e-080
gb|CA024504.1|CA024504 HZ49H21r HZ Hordeum vulgare subsp. v... 295 1e-078
gb|BF629221.2|BF629221 HVSMEb0010F24f Hordeum vulgare seedl... 293 4e-078
gb|BE195774.3|BE195774 HVSMEh0090G19f Hordeum vulgare 5-45 ... 293 4e-078
gb|BF628305.2|BF628305 HVSMEb0003K21f Hordeum vulgare seedl... 285 9e-076
gb|BF618579.2|BF618579 HVSMEc0006G01f Hordeum vulgare seedl... 285 9e-076
gb|BI959592.1|BI959592 HVSMEn0020F05f Hordeum vulgare rachi... 280 6e-074
gb|BU997613.1|BU997613 HI08H24r HI Hordeum vulgare subsp. v... 280 6e-074
gb|BI960420.1|BI960420 HVSMEn0024I16f Hordeum vulgare rachi... 270 6e-071
gb|BQ463558.1|BQ463558 HI05L07r HI Hordeum vulgare subsp. v... 264 3e-069
gb|BQ462489.1|BQ462489 HI01A16T HI Hordeum vulgare subsp. v... 260 5e-068
gb|BF627685.3|BF627685 HVSMEb0005I10f Hordeum vulgare seedl... 258 2e-067
gb|BQ461043.1|BQ461043 HE01F23r HE Hordeum vulgare subsp. v... 250 5e-065
gb|AL500052.1|AL500052 AL500052 Hordeum vulgare Barke etiol... 240 5e-062
gb|BF618456.2|BF618456 HVSMEc0005L21f Hordeum vulgare seedl... 240 5e-062
gb|BF620035.2|BF620035 HVSMEc0011F01f Hordeum vulgare seedl... 240 5e-062
gb|AW982755.3|AW982755 HVSMEg0004C03f Hordeum vulgare pre-a... 238 2e-061
gb|CA019178.1|CA019178 HV11B18r HV Hordeum vulgare subsp. v... 236 8e-061
gb|AL500119.1|AL500119 AL500119 Hordeum vulgare Barke etiol... 232 1e-059
gb|BI958106.1|BI958106 HVSMEn0013G22f Hordeum vulgare rachi... 230 5e-059
gb|BG309764.2|BG309764 HVSMEc0012H20f Hordeum vulgare seedl... 230 5e-059
gb|BF627004.2|BF627004 HVSMEb0001P03f Hordeum vulgare seedl... 228 2e-058
gb|BF267606.1|BF267606 HV_CEa0018G10f Hordeum vulgare seedl... 228 2e-058
gb|BE194552.3|BE194552 HVSMEh0085P21f Hordeum vulgare 5-45 ... 228 2e-058
gb|CA027287.1|CA027287 HZ58H04r HZ Hordeum vulgare subsp. v... 226 7e-058
gb|BF631401.2|BF631401 HVSMEb0015N09f Hordeum vulgare seedl... 214 3e-054
gb|BE216242.1|BE216242 HV_CEb0009P07f Hordeum vulgare seedl... 214 3e-054
gb|CB877507.1|CB877507 HP05D02T HP Hordeum vulgare subsp. v... 210 4e-053
gb|BI953155.1|BI953155 HVSMEm0011G01f Hordeum vulgare green... 206 7e-052
gb|CA021189.1|CA021189 HZ39G03r HZ Hordeum vulgare subsp. v... 202 1e-050
gb|BF627541.2|BF627541 HVSMEb0005C03f Hordeum vulgare seedl... 196 7e-049
gb|CB877582.1|CB877582 HP05H06T HP Hordeum vulgare subsp. v... 196 7e-049
gb|CA022401.1|CA022401 HZ43A12r HZ Hordeum vulgare subsp. v... 194 3e-048
gb|BI954358.1|BI954358 HVSMEm0017G17f Hordeum vulgare green... 190 4e-047
gb|BI956177.1|BI956177 HVSMEm0025O16f Hordeum vulgare green... 190 4e-047
gb|BF629710.1|BF629710 HVSMEb0013D21f Hordeum vulgare seedl... 188 2e-046
gb|AL450919.1|AL450919 AL450919 Hordeum vulgare Barke etiol... 168 1e-040
gb|BG309189.1|BG309189 HVSMEc0004M02f Hordeum vulgare seedl... 168 1e-040
gb|BI956709.1|BI956709 HVSMEn0004O06f Hordeum vulgare rachi... 167 6e-040
gb|BM369898.2|BM369898 EBem07_SQ004_O19_R embryo, 28 DPA, n... 165 2e-039
gb|BF618504.2|BF618504 HVSMEc0005O01f Hordeum vulgare seedl... 149 1e-034
gb|BI777946.1|BI777946 EBro07_SQ001_H07_R root, 3 week, red... 139 1e-031
gb|BQ470477.1|BQ470477 HX03B16r HX Hordeum vulgare subsp. v... 127 5e-028
gb|BQ470845.1|BQ470845 HX04D09r HX Hordeum vulgare subsp. v... 121 3e-026
gb|BF629241.2|BF629241 HVSMEb0010H14f Hordeum vulgare seedl... 119 1e-025
gb|BQ756159.1|BQ756159 EBem05_SQ001_P17_R embryo, 14 DPA, n... 119 1e-025
gb|AW982395.1|AW982395 HVSMEg0003C13f Hordeum vulgare pre-a... 107 5e-022
gb|BG368127.1|BG368127 HVSMEi0015M23f Hordeum vulgare 20 DA... 107 5e-022
gb|CA028069.1|CA028069 HZ60O07r HZ Hordeum vulgare subsp. v... 105 2e-021
gb|AL500197.1|AL500197 AL500197 Hordeum vulgare Barke etiol... 86 2e-015
gb|BQ468552.1|BQ468552 HM01J07T HM Hordeum vulgare subsp. v... 86 2e-015
gb|BE194548.2|BE194548 HVSMEh0085P11f Hordeum vulgare 5-45 ... 78 4e-013
gb|CB878261.1|CB878261 HP07O06T HP Hordeum vulgare subsp. v... 78 4e-013
gb|AL450708.1|AL450708 AL450708 Hordeum vulgare Barke etiol... 76 2e-012
gb|BQ460892.1|BQ460892 HE01O03r HE Hordeum vulgare subsp. v... 76 2e-012
gb|BQ471752.1|BQ471752 HV03F21r HV Hordeum vulgare subsp. v... 76 2e-012
gb|BI780996.2|BI780996 EBma03_SQ001_B17_R maternal, 8 DPA, ... 76 2e-012
gb|CA026923.1|CA026923 HZ57F20r HZ Hordeum vulgare subsp. v... 76 2e-012
emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan tr... 76 2e-012
gb|BF620863.2|BF620863 HVSMEa0003F12f Hordeum vulgare seedl... 70 1e-010
gb|BF622776.2|BF622776 HVSMEa0008K20f Hordeum vulgare seedl... 70 1e-010
gb|BF630403.2|BF630403 HVSMEb0009B18f Hordeum vulgare seedl... 70 1e-010
gb|BF630623.2|BF630623 HVSMEb0012E18f Hordeum vulgare seedl... 70 1e-010
gb|BF631048.2|BF631048 HVSMEb0014N08f Hordeum vulgare seedl... 70 1e-010
gb|BF631110.2|BF631110 HVSMEb0015A04f Hordeum vulgare seedl... 70 1e-010
gb|BG300161.1|BG300161 HVSMEb0010K02f Hordeum vulgare seedl... 70 1e-010
gb|BF618866.2|BF618866 HVSMEc0008D05f Hordeum vulgare seedl... 70 1e-010
gb|BF620598.2|BF620598 HVSMEc0020F14f Hordeum vulgare seedl... 70 1e-010
gb|BF263162.2|BF263162 HV_CEa0006A01f Hordeum vulgare seedl... 70 1e-010
gb|BG343644.2|BG343644 HVSMEg0006B21f Hordeum vulgare pre-a... 70 1e-010
gb|AV922899.1|AV922899 AV922899 K. Sato unpublished cDNA li... 70 1e-010
gb|AV924203.1|AV924203 AV924203 K. Sato unpublished cDNA li... 70 1e-010
gb|AV925293.1|AV925293 AV925293 K. Sato unpublished cDNA li... 70 1e-010
gb|AV927108.1|AV927108 AV927108 K. Sato unpublished cDNA li... 70 1e-010
gb|BJ463118.1|BJ463118 BJ463118 K. Sato unpublished cDNA li... 70 1e-010
gb|BQ460993.1|BQ460993 HE01I24r HE Hordeum vulgare subsp. v... 70 1e-010
gb|BI778147.2|BI778147 EBro07_SQ002_F18_R root, 3 week, red... 70 1e-010
gb|CA029613.1|CA029613 HZ65L12r HZ Hordeum vulgare subsp. v... 70 1e-010
emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotra... 70 1e-010
gb|BF617914.1|BF617914 HVSMEc0002H15f Hordeum vulgare seedl... 68 4e-010
gb|BM816264.1|BM816264 HB01H02_T3.ab1 HB Hordeum vulgare su... 68 4e-010
gb|CA023198.1|CA023198 HZ45I10r HZ Hordeum vulgare subsp. v... 68 4e-010
gb|CA030559.1|CA030559 HX07G17r HX Hordeum vulgare subsp. v... 68 4e-010
emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotr... 66 2e-009
gb|BG301313.2|BG301313 HVSMEb0020K16f Hordeum vulgare seedl... 62 3e-008
gb|AL450722.1|AL450722 AL450722 Hordeum vulgare Barke etiol... 60 1e-007
gb|BG300297.1|BG300297 HVSMEb0011P21f Hordeum vulgare seedl... 60 1e-007
gb|BI956578.1|BI956578 HVSMEn0004D19f Hordeum vulgare rachi... 60 1e-007
gb|BE454828.3|BE454828 HVSMEh0095D10f Hordeum vulgare 5-45 ... 60 1e-007
gb|BQ459051.1|BQ459051 HA02H07r HA Hordeum vulgare subsp. v... 60 1e-007
gb|BM097637.2|BM097637 EBem04_SQ002_E13_R embryo, 12 DPA, n... 60 1e-007
gb|BM377806.2|BM377806 EBem04_SQ004_D21_R embryo, 12 DPA, n... 60 1e-007
gb|BQ762342.1|BQ762342 EBro01_SQ005_F13_R root, 3 week, hyd... 60 1e-007
gb|BU998122.1|BU998122 HI10B03r HI Hordeum vulgare subsp. v... 60 1e-007
gb|CA029997.1|CA029997 HX05M19r HX Hordeum vulgare subsp. v... 60 1e-007
gb|CA031564.1|CA031564 HX10H03r HX Hordeum vulgare subsp. v... 60 1e-007
gb|CA031859.1|CA031859 HX11F08r HX Hordeum vulgare subsp. v... 60 1e-007
gb|CA031894.1|CA031894 HX11G24r HX Hordeum vulgare subsp. v... 60 1e-007
gb|CB883507.1|CB883507 HQ02H12w HQ Hordeum vulgare subsp. v... 60 1e-007
gb|BF629579.2|BF629579 HVSMEb0013G15f Hordeum vulgare seedl... 56 2e-006
gb|BF618271.2|BF618271 HVSMEc0005D16f Hordeum vulgare seedl... 56 2e-006
gb|BF620985.1|BF620985 HVSMEa0003D18f Hordeum vulgare seedl... 54 6e-006
gb|BI958667.1|BI958667 HVSMEn0016C03f Hordeum vulgare rachi... 54 6e-006
gb|BI958669.1|BI958669 HVSMEn0016C05f Hordeum vulgare rachi... 54 6e-006
gb|BI959504.1|BI959504 HVSMEn0019O24f Hordeum vulgare rachi... 54 6e-006
gb|AV916008.1|AV916008 AV916008 K. Sato unpublished cDNA li... 54 6e-006
gb|BQ767223.1|BQ767223 EBro08_SQ008_F10_R root, 3 week, dro... 54 6e-006
gb|BU971930.1|BU971930 HB20B14r BC Hordeum vulgare subsp. v... 54 6e-006
gb|BU971950.1|BU971950 HB20C15r BC Hordeum vulgare subsp. v... 54 6e-006
gb|CA008408.1|CA008408 HU10N24r HU Hordeum vulgare subsp. v... 54 6e-006
gb|BG343074.1|BG343074 HVSMEg0001P08f Hordeum vulgare pre-a... 52 2e-005
gb|BM444292.1|BM444292 EBem09_SQ004_L15_R embryo, 1 Day ger... 52 2e-005
gb|BU988965.1|BU988965 HF19F01r HF Hordeum vulgare subsp. v... 52 2e-005
gb|CA024667.1|CA024667 HZ49P10r HZ Hordeum vulgare subsp. v... 52 2e-005
gb|BF623367.2|BF623367 HVSMEa0015K08f Hordeum vulgare seedl... 50 1e-004
gb|BF256789.2|BF256789 HVSMEf0011A08f Hordeum vulgare seedl... 50 1e-004
gb|BI956580.1|BI956580 HVSMEn0004E02f Hordeum vulgare rachi... 50 1e-004
gb|BQ763335.1|BQ763335 EBro02_SQ008_B04_R root, 3 week, hyd... 50 1e-004
gb|BF622057.1|BF622057 HVSMEa0001K09f Hordeum vulgare seedl... 48 4e-004
gb|BF629934.2|BF629934 HVSMEb0007F23f Hordeum vulgare seedl... 48 4e-004
gb|AV914496.1|AV914496 AV914496 K. Sato unpublished cDNA li... 48 4e-004
gb|AV922775.1|AV922775 AV922775 K. Sato unpublished cDNA li... 48 4e-004
gb|BJ446906.1|BJ446906 BJ446906 K. Sato unpublished cDNA li... 48 4e-004
gb|BJ447562.1|BJ447562 BJ447562 K. Sato unpublished cDNA li... 48 4e-004
gb|BM816097.1|BM816097 HC111H09_T3.ab1 HC Hordeum vulgare s... 46 0.001
gb|BQ660118.1|BQ660118 HI01A16w HI Hordeum vulgare subsp. v... 46 0.001
gb|BQ767749.1|BQ767749 EBro08_SQ009_B20_R root, 3 week, dro... 46 0.001
gb|BQ760822.1|BQ760822 EBro03_SQ003_J06_R root, 3 week, wat... 44 0.006
gb|BQ763770.1|BQ763770 EBro03_SQ005_J09_R root, 3 week, wat... 44 0.006
gb|BU995418.1|BU995418 HM10D05r HM Hordeum vulgare subsp. v... 44 0.006
gb|CV058815.1|CV058815 BNEL41c2 Barley EST endosperm librar... 44 0.006
gb|CV062036.1|CV062036 BNEL75f2 Barley EST endosperm librar... 44 0.006
gb|CV062970.1|CV062970 BNEL85b5 Barley EST endosperm librar... 44 0.006
gb|BG300536.1|BG300536 HVSMEb0017G11f Hordeum vulgare seedl... 42 0.023
gb|BF267800.2|BF267800 HV_CEa0018O20f Hordeum vulgare seedl... 42 0.023
gb|BF256171.2|BF256171 HVSMEf0008P16f Hordeum vulgare seedl... 42 0.023
gb|BF259456.3|BF259456 HVSMEf0019C15f Hordeum vulgare seedl... 42 0.023
gb|BQ465021.1|BQ465021 HU02G22r HU Hordeum vulgare subsp. v... 42 0.023
gb|BM100605.2|BM100605 EBma01_SQ005_L10_R maternal, 4 DPA, ... 42 0.023
gb|CA023772.1|CA023772 HZ47F20r HZ Hordeum vulgare subsp. v... 42 0.023
gb|BE422291.1|BE422291 HWM022cE.11r ITEC HWM Barley Leaf Li... 40 0.092
gb|BI956297.1|BI956297 HVSMEn0002B20f Hordeum vulgare rachi... 40 0.092
gb|AV921125.1|AV921125 AV921125 K. Sato unpublished cDNA li... 40 0.092
gb|AV928124.1|AV928124 AV928124 K. Sato unpublished cDNA li... 40 0.092
gb|BJ468727.1|BJ468727 BJ468727 K. Sato unpublished cDNA li... 40 0.092
gb|CK122280.1|CK122280 BES1824102l14 BES1824 Hordeum vulgar... 40 0.092
gb|BF254306.2|BF254306 HVSMEf0003J15f Hordeum vulgare seedl... 38 0.36
gb|BG365090.1|BG365090 HVSMEi0001D21f Hordeum vulgare 20 DA... 38 0.36
gb|BI958113.1|BI958113 HVSMEn0013H08f Hordeum vulgare rachi... 38 0.36
gb|BM816111.1|BM816111 HC113E12_SK.ab1 HC Hordeum vulgare s... 38 0.36
gb|CA018175.1|CA018175 HV07M23r HV Hordeum vulgare subsp. v... 38 0.36
gb|AU252335.1|AU252335 AU252335 salt-stressed barley root c... 38 0.36
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
(XEB)
Length = 1226
Score = 507 bits (256), Expect = e-142
Identities = 438/496 (88%), Gaps = 2/496 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 169 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 228
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 229 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 288
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 289 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 348
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 349 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 407
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 408 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 467
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 468 aggggcaggggcagcgggagcagcagttccgcctctggttcgaccccaccaaggccttcc 527
Query: 543 acacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcaccccgg 602
|||||||||||||| | ||||||||||||||||| || ||||||||||||||||| ||
Sbjct: 528 acacctactccatcatctggaacccgcagcacgtcatattcgcggtggacggcacggcga 587
Query: 603 tgcgggacttcaagaaccacgaggcgcgcggggtggcgttcccgaggatgcagcccatga 662
| ||||||||||||||||||||||||| || ||| ||||||| | || ||||| |||
Sbjct: 588 tcagggacttcaagaaccacgaggcgcggggcgtgtcgttccccaagagccagccgatgc 647
Query: 663 ggctgtacgccagcct 678
|||||||||| |||||
Sbjct: 648 ggctgtacgcgagcct 663
>gb|BQ467526.1|BQ467526 HS04B01r HS Hordeum vulgare subsp. vulgare cDNA clone HS04B01
5-PRIME, mRNA sequence
Length = 665
Score = 502 bits (253), Expect = e-141
Identities = 437/496 (88%), Gaps = 2/496 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 164 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 223
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 224 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 283
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 284 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 343
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 344 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 402
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 403 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 462
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 463 aggggcaggggcagcgggagcagcagttccgcctctggttcgaccccaccaaggccttcc 522
Query: 543 acacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcaccccgg 602
|||||||||||||| | ||||||||||||||||| || ||||||||||||||||| ||
Sbjct: 523 acacctactccatcatctggaacccgcagcacgtcatattcgcggtggacggcacggcga 582
Query: 603 tgcgggacttcaagaaccacgaggcgcgcggggtggcgttcccgaggatgcagcccatga 662
| ||||||||||||||||||||||||| | ||| ||||||| | || ||||| |||
Sbjct: 583 tcagggacttcaagaaccacgaggcgcggngcgtgtcgttccccaagagccagccgatgc 642
Query: 663 ggctgtacgccagcct 678
|||||||||| |||||
Sbjct: 643 ggctgtacgcgagcct 658
>gb|BF260656.2|BF260656 HVSMEf0022J12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022J12f, mRNA sequence
Length = 729
Score = 500 bits (252), Expect = e-140
Identities = 437/496 (88%), Gaps = 2/496 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || |||||||| ||||| || ||
Sbjct: 165 cggcaacttcttccaggactcggagatgtcctggggggacggccgcgggaaggtcgtcga 224
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 225 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 284
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 285 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 344
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 345 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 403
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||| ||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 404 tcgagttcctgggtaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 463
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||
Sbjct: 464 aggggcaggggcagcgggagcaacagttccgcctctggttcgaccccaccaaggccttcc 523
Query: 543 acacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcaccccgg 602
|||||||||||||| | ||||||||||||||||| || ||||||||||||||||| ||
Sbjct: 524 acacctactccatcatctggaacccgcagcacgtcatattcgcggtggacggcacggcga 583
Query: 603 tgcgggacttcaagaaccacgaggcgcgcggggtggcgttcccgaggatgcagcccatga 662
| ||||||||||||||||||||||||| || ||| ||||||| | || ||||| |||
Sbjct: 584 tcagggacttcaagaaccacgaggcgcggggcgtgtcgttccccaagagccagccgatgc 643
Query: 663 ggctgtacgccagcct 678
|||||||||| |||||
Sbjct: 644 ggctgtacgcgagcct 659
>gb|BI960618.1|BI960618 HVSMEn0025G09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025G09f, mRNA sequence
Length = 690
Score = 476 bits (240), Expect = e-133
Identities = 397/447 (88%), Gaps = 2/447 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || |||||||| ||||| || ||
Sbjct: 181 cggcaacttcttccaggactcggagatgtcctggggggacggccgcgggaaggtcgtcga 240
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 241 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 300
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 301 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 360
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 361 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 419
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||| ||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 420 tcgagttcctgggtaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 479
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| ||||||||||||||||||||||||||||||||||| |||| ||||| |
Sbjct: 480 atgggcaggggcagcgggagcagcagttccgcctctggttcgaccccaccaaggccttnc 539
Query: 543 acacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcaccccgg 602
|||||||||||||| | ||||||||||||||||| || ||||| ||||||||||| ||
Sbjct: 540 acacctactccatcatctggaacccgcagcacgtcatattcgccgtggacggcacggcga 599
Query: 603 tgcgggacttcaagaaccacgaggcgc 629
| ||||||||||||||||||||||||
Sbjct: 600 tcagggacttcaagaaccacgaggcgc 626
>gb|BE060552.2|BE060552 HVSMEg0012J20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0012J20f, mRNA sequence
Length = 621
Score = 468 bits (236), Expect = e-130
Identities = 397/448 (88%), Gaps = 2/448 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || |||||||| ||||| || ||
Sbjct: 169 cggcaacttcttccaggactcggagatgtcctggggggacggccgcgggaaggtcgtcga 228
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 229 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 288
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 289 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 348
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 349 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 407
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||| ||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 408 tcgagttcctgggtaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 467
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 468 aggggcaggggcagcgggagcagcagttccgcctctggttcgaccccaccaaggccttcc 527
Query: 543 acacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcaccccgg 602
|||||||||||||| | ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 528 acacctactccatcatctggaacccgcagcacgtcatattcgcggtggacggcacgggga 587
Query: 603 tgcgggacttcaagaaccacgaggcgcg 630
| ||||||||||||||| ||| |||||
Sbjct: 588 tcagggacttcaagaaccccgaagcgcg 615
>gb|BU997685.1|BU997685 HI08L09r HI Hordeum vulgare subsp. vulgare cDNA clone HI08L09
5-PRIME, mRNA sequence
Length = 583
Score = 466 bits (235), Expect = e-130
Identities = 372/415 (89%), Gaps = 2/415 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 154 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 213
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 214 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 273
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 274 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 333
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 334 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 392
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 393 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 452
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 453 aggggcaggggcagcgggagcagcagttccgcctctggttcgaccccaccaaggccttcc 512
Query: 543 acacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcac 597
|||||||||||||| | ||||||||||||||||| || |||||||||||||||||
Sbjct: 513 acacctactccatcatctggaacccgcagcacgtcatattcgcggtggacggcac 567
>gb|BE455947.3|BE455947 HVSMEg0017N10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017N10f, mRNA sequence
Length = 801
Score = 464 bits (234), Expect = e-129
Identities = 432/496 (87%), Gaps = 2/496 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || |||||||| ||||| || ||
Sbjct: 164 cggcaacttcttccaggactcggagatgtcctggggggacggccgcgggaaggtcgtcga 223
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| || ||||||||
Sbjct: 224 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggctttcagtccaa 283
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 284 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 343
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 344 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 402
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||| ||||| | | | |||||||||||||||||||||||||||||| |||
Sbjct: 403 tcgagttcctgggtaacgtcacccgcgagccctacacgctgcacaccaacgtgttcgcgc 462
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 463 aggggcaggggcagcgggagcagcagttccgcctctggttcgaccccaccaaggccttcc 522
Query: 543 acacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcaccccgg 602
|||||| |||| | ||||||||||||||||| || ||||||||||||||||| ||
Sbjct: 523 acacctnactcatcatctggaacccgcagcacgtcatattcgcggtggacggcacggcga 582
Query: 603 tgcgggacttcaagaaccacgaggcgcgcggggtggcgttcccgaggatgcagcccatga 662
| ||||||||||||||||||||||||| || ||| ||||||| | || ||||| |||
Sbjct: 583 tcagggacttcaagaaccacgaggcgcgnggcgtgtcgttccccaagagccagccgatgc 642
Query: 663 ggctgtacgccagcct 678
|||||||||| |||||
Sbjct: 643 ggctgtacgcgagcct 658
>gb|BF624089.2|BF624089 HVSMEa0009G06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0009G06f, mRNA sequence
Length = 798
Score = 440 bits (222), Expect = e-122
Identities = 353/394 (89%), Gaps = 2/394 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || |||||||| ||||| || ||
Sbjct: 176 cggcaacttcttccaggactcggagatgtcctggggggacggccgcgggaaggtcgtcga 235
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 236 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 295
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 296 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 355
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 356 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 414
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||| ||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 415 tcgagttcctgggtaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 474
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 475 aggggcaggggcagcgggagcagcagttccgcctctggttcgaccccaccaaggccttcc 534
Query: 543 acacctactccatcctgtggaacccgcagcacgt 576
|||||||||||||| | |||||||||||||||||
Sbjct: 535 acacctactccatcatctggaacccgcagcacgt 568
>gb|BQ467998.1|BQ467998 HR01J18r HR Hordeum vulgare subsp. vulgare cDNA clone HR01J18
5-PRIME, mRNA sequence
Length = 575
Score = 440 bits (222), Expect = e-122
Identities = 353/394 (89%), Gaps = 2/394 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 177 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 236
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 237 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 296
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 297 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 356
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 357 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 415
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 416 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 475
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 476 aggggcaggggcagcgggagcagcagttccgcctctggttcgaccccaccaaggccttcc 535
Query: 543 acacctactccatcctgtggaacccgcagcacgt 576
|||||||||||||| | |||||||||||||||||
Sbjct: 536 acacctactccatcatctggaacccgcagcacgt 569
>gb|BU997928.1|BU997928 HI09H06r HI Hordeum vulgare subsp. vulgare cDNA clone HI09H06
5-PRIME, mRNA sequence
Length = 551
Score = 440 bits (222), Expect = e-122
Identities = 353/394 (89%), Gaps = 2/394 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 154 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 213
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 214 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 273
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 274 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 333
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 334 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 392
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 393 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 452
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 453 aggggcaggggcagcgggagcagcagttccgcctctggttcgaccccaccaaggccttcc 512
Query: 543 acacctactccatcctgtggaacccgcagcacgt 576
|||||||||||||| | |||||||||||||||||
Sbjct: 513 acacctactccatcatctggaacccgcagcacgt 546
>gb|BQ460689.1|BQ460689 HA06D17r HA Hordeum vulgare subsp. vulgare cDNA clone HA06D17
5-PRIME, mRNA sequence
Length = 569
Score = 438 bits (221), Expect = e-121
Identities = 352/393 (89%), Gaps = 2/393 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 178 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 237
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 238 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 297
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 298 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 357
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 358 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 416
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 417 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 476
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 477 aggggcaggggcagcgggagcagcagttccgcctctggttcgaccccaccaaggccttcc 536
Query: 543 acacctactccatcctgtggaacccgcagcacg 575
|||||||||||||| | ||||||||||||||||
Sbjct: 537 acacctactccatcatctggaacccgcagcacg 569
>gb|CA007079.1|CA007079 HU06K21r HU Hordeum vulgare subsp. vulgare cDNA clone HU06K21
5-PRIME, mRNA sequence
Length = 574
Score = 432 bits (218), Expect = e-120
Identities = 351/393 (89%), Gaps = 2/393 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 183 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 242
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 243 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 302
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 303 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 362
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 363 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 421
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 422 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 481
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| ||||| |||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 482 aggggcaggggcagcgggagcagcagttccgcctctggttcgaccncaccaaggccttcc 541
Query: 543 acacctactccatcctgtggaacccgcagcacg 575
|||||||||||||| | ||||||||||||||||
Sbjct: 542 acacctactccatcatctggaacccgcagcacg 574
>gb|BI778475.2|BI778475 EBro07_SQ003_G13_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_G13 5', mRNA sequence
Length = 525
Score = 428 bits (216), Expect = e-118
Identities = 341/380 (89%), Gaps = 2/380 (0%)
Strand = Plus / Plus
Query: 300 ccaagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaact 359
|||||||||||||||| ||||||||||||||||||||||||||||| || || |||||||
Sbjct: 1 ccaagagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaact 60
Query: 360 ccgctggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatc 418
|||| ||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||
Sbjct: 61 ccgccggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatc 119
Query: 419 gacttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttc 478
||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 120 gacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttc 179
Query: 479 acgcgcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgcc 538
||| || ||||| ||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 180 gcgcaggggcaggggcagcgggagcagcagttccgcctctggttcgaccccaccaaggcc 239
Query: 539 ttccacacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcacc 598
|||||||||||||||||| | ||||||||||||||||| || |||||||||||||||||
Sbjct: 240 ttccacacctactccatcatctggaacccgcagcacgtcatattcgcggtggacggcacg 299
Query: 599 ccggtgcgggacttcaagaaccacgaggcgcgcggggtggcgttcccgaggatgcagccc 658
|| | ||||||||||||||||||||||||| || ||| ||||||| | || |||||
Sbjct: 300 gcgatcagggacttcaagaaccacgaggcgcggggcgtgtcgttccccaagagccagccg 359
Query: 659 atgaggctgtacgccagcct 678
||| |||||||||| |||||
Sbjct: 360 atgcggctgtacgcgagcct 379
>gb|BF260946.2|BF260946 HVSMEf0023F18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023F18f, mRNA sequence
Length = 798
Score = 408 bits (206), Expect = e-113
Identities = 349/394 (88%), Gaps = 2/394 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || |||||||| ||||| || |
Sbjct: 178 cggcaacttcttccaggactcggagatgtcctggggggacggccgcgggaaggtcgtcaa 237
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| || ||||||||
Sbjct: 238 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggctttcagtccaa 297
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 298 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 357
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 358 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 416
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||| ||||| | ||| ||||||||||||||||||||||||||||| |||
Sbjct: 417 tcgagttcctgggtaacgtcaccggcgagccctacacgctgcacaccaacgtgtttccgc 476
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| || || ||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 477 aggggcaagggcagcgggagcagcagttccgcctctggttcgaccccaccaaggccttcc 536
Query: 543 acacctactccatcctgtggaacccgcagcacgt 576
|||||||||||||| | |||||||||||||||||
Sbjct: 537 acacctactccatcatctggaacccgcagcacgt 570
>gb|BI957177.1|BI957177 HVSMEn0007P14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007P14f, mRNA sequence
Length = 908
Score = 404 bits (204), Expect = e-111
Identities = 389/448 (86%), Gaps = 2/448 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || |||||||| ||||| || |
Sbjct: 157 cggcaacttcttccaggactcggagatgtcctggggggacggccgcgggaaggtcgtcca 216
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
| |||| |||||||||||||| ||||| ||| || ||||||||||| ||||||||||
Sbjct: 217 ctgcggccgcgggctggacctcacgctcgacaagacctccggctccggcttccagtccat 276
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||| ||||||||||||| || || |||||||||||
Sbjct: 277 gagcgagtacctcttcggcaagatcgacgtgcagatcaagctcgtccccggcaactccgc 336
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgacg-cgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 337 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 395
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||| |||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 396 tcgagttcctgggtgacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 455
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttcc 542
|| || || |||||||||||||||||||| |||||||||||||| |||| |||||||
Sbjct: 456 aggggcaagggcagcgggagcagcagttccggctctggttcgaccccaccaaggccttcc 515
Query: 543 acacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcaccccgg 602
||||||||| |||| | |||||||||||||||||||| ||| |||||||||| || |
Sbjct: 516 acacctactgcatcatctggaacccgcagcacgtgatattcccggtggacgggactggga 575
Query: 603 tgcgggacttcaagaaccacgaggcgcg 630
| ||||||||| ||||||||||||||
Sbjct: 576 atcaggacttcaacaaccacgaggcgcg 603
>gb|BQ462594.1|BQ462594 HI01G12T HI Hordeum vulgare subsp. vulgare cDNA clone HI01G12
5-PRIME, mRNA sequence
Length = 486
Score = 385 bits (194), Expect = e-105
Identities = 310/346 (89%), Gaps = 2/346 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 138 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 197
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 198 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 257
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 258 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 317
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 318 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 376
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 377 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 436
Query: 483 gcggacagggccagcgggagcagcagttccgcctctggttcgaccc 528
|| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 aggggcaggggcagcgggagcagcagttccgcctctggttcgaccc 482
>gb|AL503674.1|AL503674 AL503674 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03A15T 5', mRNA sequence
Length = 520
Score = 373 bits (188), Expect = e-102
Identities = 314/352 (89%), Gaps = 3/352 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 155 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 214
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 215 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 274
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 275 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 334
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 335 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 393
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 394 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 453
Query: 483 gcggacagggccagcgggagc-agcagttccgcctctggttcgaccctacca 533
|| ||||| |||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 454 aggggcaggggcagcgggagcaagcagttccgcctctggttcgaccccacca 505
>gb|CA003718.1|CA003718 HS15F14r HS Hordeum vulgare subsp. vulgare cDNA clone HS15F14
5-PRIME, mRNA sequence
Length = 513
Score = 353 bits (178), Expect = 5e-096
Identities = 294/330 (89%), Gaps = 2/330 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 185 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 244
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 245 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 304
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 305 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 364
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 365 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 423
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 424 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 483
Query: 483 gcggacagggccagcgggagcagcagttcc 512
|| ||||| |||||||||||||||||||
Sbjct: 484 aggggcaggggcagcgggagcagcagttcc 513
>gb|BQ662128.1|BQ662128 HR01K20u HR Hordeum vulgare subsp. vulgare cDNA clone HR01K20
3-PRIME, mRNA sequence
Length = 494
Score = 347 bits (175), Expect = 3e-094
Identities = 291/327 (88%), Gaps = 2/327 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 169 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 228
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 229 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 288
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 289 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 348
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 349 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 407
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 408 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 467
Query: 483 gcggacagggccagcgggagcagcagt 509
|| ||||| ||||||||||||||||
Sbjct: 468 aggggcaggggcagcgggagcagcagt 494
>gb|BQ467575.1|BQ467575 HS04D13r HS Hordeum vulgare subsp. vulgare cDNA clone HS04D13
5-PRIME, mRNA sequence
Length = 488
Score = 345 bits (174), Expect = 1e-093
Identities = 290/326 (88%), Gaps = 2/326 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 164 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 223
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 224 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 283
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 284 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 343
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 344 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 402
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 403 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 462
Query: 483 gcggacagggccagcgggagcagcag 508
|| ||||| |||||||||||||||
Sbjct: 463 aggggcaggggcagcgggagcagcag 488
>gb|CA003908.1|CA003908 HS15O19r HS Hordeum vulgare subsp. vulgare cDNA clone HS15O19
5-PRIME, mRNA sequence
Length = 494
Score = 345 bits (174), Expect = 1e-093
Identities = 290/326 (88%), Gaps = 2/326 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 170 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 229
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 230 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 289
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 290 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 349
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 350 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 408
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 409 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 468
Query: 483 gcggacagggccagcgggagcagcag 508
|| ||||| |||||||||||||||
Sbjct: 469 aggggcaggggcagcgggagcagcag 494
>gb|AL500460.1|AL500460 AL500460 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK06L16r 3', mRNA sequence
Length = 700
Score = 339 bits (171), Expect = 7e-092
Identities = 270/303 (89%)
Strand = Plus / Minus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||
Sbjct: 571 tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagctc 512
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || ||||||||||| ||||| |||||| | | ||||||||||| |||||
Sbjct: 511 aagctcgtccccggcaactccgccggcaccgtcaccgcatattacctgtcgtcgcagggt 452
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||
Sbjct: 451 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccatacacg 392
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 391 ctgcacaccaacgtgttcacgcaggggcagggccagcgggagcagcagttccgcctctgg 332
Query: 521 ttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgatc 580
||||| ||||||| | ||||||||||||||||||||| ||||||||| ||||| | |||
Sbjct: 331 ttcgatcctaccaacgacttccacacctactccatcctctggaacccgaagcacatcatc 272
Query: 581 ttc 583
|||
Sbjct: 271 ttc 269
>gb|BF631278.2|BF631278 HVSMEb0015H17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015H17f, mRNA sequence
Length = 768
Score = 339 bits (171), Expect = 7e-092
Identities = 270/303 (89%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||
Sbjct: 124 tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagctc 183
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || ||||||||||| ||||| |||||| | | ||||||||||| |||||
Sbjct: 184 aagctcgtccccggcaactccgccggcaccgtcaccgcatattacctgtcgtcgcagggt 243
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||
Sbjct: 244 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccatacacg 303
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 304 ctgcacaccaacgtgttcacgcaggggcagggccagcgggagcagcagttccgcctctgg 363
Query: 521 ttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgatc 580
||||| ||||||| | ||||||||||||||||||||| ||||||||| ||||| | |||
Sbjct: 364 ttcgatcctaccaacgacttccacacctactccatcctctggaacccgaagcacatcatc 423
Query: 581 ttc 583
|||
Sbjct: 424 ttc 426
>gb|BM370804.2|BM370804 EBro04_SQ002_F05_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_F05 5', mRNA sequence
Length = 601
Score = 339 bits (171), Expect = 7e-092
Identities = 270/303 (89%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||
Sbjct: 178 tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagctc 237
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || ||||||||||| ||||| |||||| | | ||||||||||| |||||
Sbjct: 238 aagctcgtccccggcaactccgccggcaccgtcaccgcatattacctgtcgtcgcagggt 297
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||
Sbjct: 298 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccatacacg 357
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 358 ctgcacaccaacgtgttcacgcaggggcagggccagcgggagcagcagttccgcctctgg 417
Query: 521 ttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgatc 580
||||| ||||||| | ||||||||||||||||||||| ||||||||| ||||| | |||
Sbjct: 418 ttcgatcctaccaacgacttccacacctactccatcctctggaacccgaagcacatcatc 477
Query: 581 ttc 583
|||
Sbjct: 478 ttc 480
>gb|BQ764817.1|BQ764817 EBca01_SQ005_A06_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_A06 5', mRNA sequence
Length = 634
Score = 339 bits (171), Expect = 7e-092
Identities = 270/303 (89%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||
Sbjct: 256 tccggctccgggttccagtccaagcgcgagtacctcttcggcaagatcgacatgcagctc 315
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || ||||||||||| ||||| |||||| | | ||||||||||| |||||
Sbjct: 316 aagctcgtccccggcaactccgccggcaccgtcaccgcatattacctgtcgtcgcagggt 375
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||
Sbjct: 376 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccatacacg 435
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 436 ctgcacaccaacgtgttcacgcaggggcagggccagcgggagcagcagttccgcctctgg 495
Query: 521 ttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgatc 580
||||| ||||||| | ||||||||||||||||||||| ||||||||| ||||| | |||
Sbjct: 496 ttcgatcctaccaacgacttccacacctactccatcctctggaacccgaagcacatcatc 555
Query: 581 ttc 583
|||
Sbjct: 556 ttc 558
>gb|BF627738.2|BF627738 HVSMEb0005K17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005K17f, mRNA sequence
Length = 831
Score = 325 bits (164), Expect = 1e-087
Identities = 296/340 (87%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||
Sbjct: 206 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcaactc 265
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || ||||||||||| ||||| || ||| ||| |||||||||||| |||||
Sbjct: 266 aagctcgtccccggcaactccgccggcaccgtaaccgcctactacctgtcgtcgcagggt 325
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 326 cctacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 385
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 386 ctgcacaccaacgtgttcacgcaggggcagggccagcgggagcagcagttccgcctctgg 445
Query: 521 ttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgatc 580
||||| || |||| | ||||||||||||||||||||| |||||||| ||||| | |||
Sbjct: 446 ttcgatcccaccaacgacttccacacctactccatcctttggaacccaaagcacatcatc 505
Query: 581 ttcgcggtggacggcaccccggtgcgggacttcaagaacc 620
||| |||||| | || ||| | |||||||||||||||
Sbjct: 506 ttcatggtggatgacatgccgatcagggacttcaagaacc 545
>gb|CA001720.1|CA001720 HS05G04r HS Hordeum vulgare subsp. vulgare cDNA clone HS05G04
5-PRIME, mRNA sequence
Length = 484
Score = 325 bits (164), Expect = 1e-087
Identities = 265/296 (89%), Gaps = 2/296 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 182 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 241
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 242 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 301
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 302 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 361
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 362 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 420
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttc 478
||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 421 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttc 476
>gb|CA023472.1|CA023472 HZ46F16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46F16
5-PRIME, mRNA sequence
Length = 452
Score = 325 bits (164), Expect = 1e-087
Identities = 265/296 (89%), Gaps = 2/296 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 140 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 199
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 200 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 259
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 260 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 319
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 320 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 378
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttc 478
||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 379 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttc 434
>gb|BQ759958.1|BQ759958 EBpi05_SQ004_P23_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_P23 5', mRNA sequence
Length = 537
Score = 323 bits (163), Expect = 4e-087
Identities = 256/287 (89%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||
Sbjct: 212 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcaactc 271
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || ||||||||||| ||||| || ||| ||| |||||||||||| |||||
Sbjct: 272 aagctcgtccccggcaactccgccggcaccgtaaccgcctactacctgtcgtcgcagggt 331
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 332 cctacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 391
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 392 ctgcacaccaacgtgttcacgcaggggcagggccagcgggagcagcagttccgcctctgg 451
Query: 521 ttcgaccctaccactgccttccacacctactccatcctgtggaaccc 567
||||| || |||| | ||||||||||||||||||||| ||||||||
Sbjct: 452 ttcgatcccaccaacgacttccacacctactccatcctttggaaccc 498
>gb|BF626739.2|BF626739 HVSMEb0001D16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001D16f, mRNA sequence
Length = 844
Score = 319 bits (161), Expect = 7e-086
Identities = 298/341 (87%), Gaps = 2/341 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 211 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 270
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 271 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 329
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 330 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 389
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 390 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctg 449
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgat 579
|||||| || |||| | ||||||||||||||||||||| |||||||| ||||| | ||
Sbjct: 450 gttcgatcccaccaacgacttccacacctactccatcctctggaacccaaagcacatcat 509
Query: 580 cttcgcggtggacggcaccccggtgcgggacttcaagaacc 620
|||| |||||||| || ||| | |||||||||||||||
Sbjct: 510 cttcatggtggacgacatgccgatcagggacttcaagaacc 550
>gb|BG300583.1|BG300583 HVSMEb0017J11f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017J11f, mRNA sequence
Length = 876
Score = 319 bits (161), Expect = 7e-086
Identities = 298/341 (87%), Gaps = 2/341 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 199 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 258
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 259 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 317
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 318 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 377
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 378 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctg 437
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgat 579
|||||| || |||| | ||||||||||||||||||||| |||||||| ||||| | ||
Sbjct: 438 gttcgatcccaccaacgacttccacacctactccatcctctggaacccaaagcacatcat 497
Query: 580 cttcgcggtggacggcaccccggtgcgggacttcaagaacc 620
|||| |||||||| || ||| | |||||||||||||||
Sbjct: 498 cttcatggtggacgacatgccgatcagggacttcaagaacc 538
>gb|BG300865.1|BG300865 HVSMEb0018L19f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0018L19f, mRNA sequence
Length = 607
Score = 319 bits (161), Expect = 7e-086
Identities = 298/341 (87%), Gaps = 2/341 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 190 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 249
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 250 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 308
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 309 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 368
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 369 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctg 428
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgat 579
|||||| || |||| | ||||||||||||||||||||| |||||||| ||||| | ||
Sbjct: 429 gttcgatcccaccaacgacttccacacctactccatcctctggaacccaaagcacatcat 488
Query: 580 cttcgcggtggacggcaccccggtgcgggacttcaagaacc 620
|||| |||||||| || ||| | |||||||||||||||
Sbjct: 489 cttcatggtggacgacatgccgatcagggacttcaagaacc 529
>gb|BG309440.1|BG309440 HVSMEc0010E08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0010E08f, mRNA sequence
Length = 788
Score = 319 bits (161), Expect = 7e-086
Identities = 298/341 (87%), Gaps = 2/341 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 187 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 246
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 247 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 305
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 306 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 365
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 366 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctg 425
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgat 579
|||||| || |||| | ||||||||||||||||||||| |||||||| ||||| | ||
Sbjct: 426 gttcgatcccaccaacgacttccacacctactccatcctctggaacccaaagcacatcat 485
Query: 580 cttcgcggtggacggcaccccggtgcgggacttcaagaacc 620
|||| |||||||| || ||| | |||||||||||||||
Sbjct: 486 cttcatggtggacgacatgccgatcagggacttcaagaacc 526
>gb|BG310036.1|BG310036 HVSMEc0016C04f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016C04f, mRNA sequence
Length = 831
Score = 319 bits (161), Expect = 7e-086
Identities = 298/341 (87%), Gaps = 2/341 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 196 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 255
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 256 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 314
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 315 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 374
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 375 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctg 434
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgat 579
|||||| || |||| | ||||||||||||||||||||| |||||||| ||||| | ||
Sbjct: 435 gttcgatcccaccaacgacttccacacctactccatcctctggaacccaaagcacatcat 494
Query: 580 cttcgcggtggacggcaccccggtgcgggacttcaagaacc 620
|||| |||||||| || ||| | |||||||||||||||
Sbjct: 495 cttcatggtggacgacatgccgatcagggacttcaagaacc 535
>gb|BQ462941.1|BQ462941 HI02H24r HI Hordeum vulgare subsp. vulgare cDNA clone HI02H24
5-PRIME, mRNA sequence
Length = 538
Score = 313 bits (158), Expect = 4e-084
Identities = 277/314 (88%), Gaps = 2/314 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 213 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 272
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 273 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 331
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 332 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 391
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 392 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctg 451
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgat 579
|||||| || |||| | ||||||||||||||||||||| |||||||| ||||| | ||
Sbjct: 452 gttcgatcccaccaacgacttccacacctactccatcctctggaacccaaagcacatcat 511
Query: 580 cttcgcggtggacg 593
|||| ||||||||
Sbjct: 512 cttcatggtggacg 525
>gb|BQ764772.1|BQ764772 EBca01_SQ004_H24_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_H24 5', mRNA sequence
Length = 525
Score = 313 bits (158), Expect = 4e-084
Identities = 277/314 (88%), Gaps = 2/314 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 202 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 261
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 262 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 320
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 321 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 380
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 381 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctg 440
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgat 579
|||||| || |||| | ||||||||||||||||||||| |||||||| ||||| | ||
Sbjct: 441 gttcgatcccaccaacgacttccacacctactccatcctctggaacccaaagcacatcat 500
Query: 580 cttcgcggtggacg 593
|||| ||||||||
Sbjct: 501 cttcatggtggacg 514
>gb|AL450913.1|AL450913 AL450913 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04P11u 5', mRNA sequence
Length = 638
Score = 311 bits (157), Expect = 2e-083
Identities = 297/341 (87%), Gaps = 2/341 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 212 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 271
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 272 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 330
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 331 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 390
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 391 gctgcacaccaacgtgttcacgcaggggcaaggccaacgggagcaacagttccgcctctg 450
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgat 579
|||||| || |||| | ||||||||||||||||||||| |||||||| ||||| | ||
Sbjct: 451 gttcgatcccaccaacgacttccacacctactccatcctctggaacccaaagcacatcat 510
Query: 580 cttcgcggtggacggcaccccggtgcgggacttcaagaacc 620
|||| |||||||| || ||| | |||||||||||||||
Sbjct: 511 cttcatggtggacgacatgccgatcagggacttcaagaacc 551
>gb|BQ462553.1|BQ462553 HI01E04T HI Hordeum vulgare subsp. vulgare cDNA clone HI01E04
5-PRIME, mRNA sequence
Length = 495
Score = 311 bits (157), Expect = 2e-083
Identities = 265/297 (89%), Gaps = 3/297 (1%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||||||| | |||||| ||||||| || || ||||| ||||| || ||
Sbjct: 178 cggcaacttcttccaggactcggagatgtcctggggggacggacgcgggaaggtcgtcga 237
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
|||||| |||||||| ||||| ||||| ||| || ||||||||||| |||||||||||
Sbjct: 238 cggcggccgcgggctcgacctcacgctcgacaagacctccggctccggcttccagtccaa 297
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 298 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 357
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 358 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 416
Query: 423 tcgagttcctgggcaacgtgagcggggag-ccctacacgctgcacaccaacgtgttc 478
||||||||||||||||||| | ||| ||| |||||||||||||||||||||||||||
Sbjct: 417 tcgagttcctgggcaacgtcaccggcgagcccctacacgctgcacaccaacgtgttc 473
>gb|BF628380.2|BF628380 HVSMEb0003O02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003O02f, mRNA sequence
Length = 507
Score = 309 bits (156), Expect = 6e-083
Identities = 257/288 (89%), Gaps = 2/288 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 208 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 267
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 268 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 326
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 327 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 386
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 387 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctg 446
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaaccc 567
|||||| || |||| | ||||||||||||||||||||| ||||||||
Sbjct: 447 gttcgatcccaccaacgacttccacacctactccatcctctggaaccc 494
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
(XEA)
Length = 1174
Score = 309 bits (156), Expect = 6e-083
Identities = 294/340 (86%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 205 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 264
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 265 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagggt 324
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||
Sbjct: 325 ccgacgcacgacgagatcgacttcgagttcctgggaaacgtcaccggcgagccctacacg 384
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
|||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||
Sbjct: 385 ctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctgg 444
Query: 521 ttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgatc 580
||||| || |||| | ||||||||||||||||||||| |||||||| ||||| | |||
Sbjct: 445 ttcgatcccaccaacgacttccacacctactccatcctctggaacccaaagcacatcatc 504
Query: 581 ttcgcggtggacggcaccccggtgcgggacttcaagaacc 620
||| |||||||| || ||| | |||||||||||||||
Sbjct: 505 ttcatggtggacgacatgccgatcagggacttcaagaacc 544
>gb|AL500129.1|AL500129 AL500129 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05A03r 3', mRNA sequence
Length = 439
Score = 307 bits (155), Expect = 3e-082
Identities = 296/341 (86%), Gaps = 2/341 (0%)
Strand = Plus / Minus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| ||
Sbjct: 425 tccggctccgggttccagtccaagcangagtacctcttcggcaagatngacatgcagctc 366
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 365 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 307
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 306 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 247
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 246 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctg 187
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtgat 579
|||||| || |||| | ||||||||||||||||||||| |||||||| ||||| | ||
Sbjct: 186 gttcgatcccaccaacgacttccacacctactccatcctctggaacccaaagcacatcat 127
Query: 580 cttcgcggtggacggcaccccggtgcgggacttcaagaacc 620
|||| |||||||| || ||| | |||||||||||||||
Sbjct: 126 cttcatggtggacgacatgccgatcagggacttcaagaacc 86
>gb|AL450643.1|AL450643 AL450643 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03J06u 5', mRNA sequence
Length = 529
Score = 303 bits (153), Expect = 4e-081
Identities = 256/288 (88%), Gaps = 2/288 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 206 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 265
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 266 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 324
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 325 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 384
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 385 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctg 444
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaaccc 567
|||||| | |||| | ||||||||||||||||||||| ||||||||
Sbjct: 445 gttcgatnccaccaacgacttccacacctactccatcctctggaaccc 492
>gb|BF629930.2|BF629930 HVSMEb0007F19f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007F19f, mRNA sequence
Length = 499
Score = 301 bits (152), Expect = 2e-080
Identities = 256/288 (88%), Gaps = 2/288 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 203 tccggctcccggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 262
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 263 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 321
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 322 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 381
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 382 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttccgcctctg 441
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaaccc 567
|||||| || |||| | ||||||||||||||||||||| ||||||||
Sbjct: 442 gttcgatcccaccaacgacttccacacctactccatcctctggaaccc 489
>gb|CA020574.1|CA020574 HZ36L09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36L09
5-PRIME, mRNA sequence
Length = 589
Score = 299 bits (151), Expect = 6e-080
Identities = 276/315 (87%), Gaps = 2/315 (0%)
Strand = Plus / Plus
Query: 280 gtccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagat 339
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
Sbjct: 265 gtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 324
Query: 340 caagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccaggg 399
|||||| || || |||||||| || ||||| |||||| | | |||||||||||| |||||
Sbjct: 325 caagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcaggg 384
Query: 400 cgacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctaca 458
| || ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||
Sbjct: 385 -gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctaca 443
Query: 459 cgctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctct 518
|||||||||||||||||||||||| || || ||||| |||||||||||||| |||||||
Sbjct: 444 cgctgcacaccaacgtgttcacgcaggggcaaggccaacgggagcagcagtttcgcctct 503
Query: 519 ggttcgaccctaccactgccttccacacctactccatcctgtggaacccgcagcacgtga 578
||||||| || |||| | |||||||||||||||||||| |||||||| ||||| | |
Sbjct: 504 ggttcgatcccaccaacgatttccacacctactccatcctctggaacccaaagcacatca 563
Query: 579 tcttcgcggtggacg 593
||||| ||||||||
Sbjct: 564 tcttcatggtggacg 578
>gb|CA027653.1|CA027653 HZ59J16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59J16
5-PRIME, mRNA sequence
Length = 329
Score = 299 bits (151), Expect = 6e-080
Identities = 250/283 (88%)
Strand = Plus / Plus
Query: 301 caagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactc 360
|||| |||||||||| ||||||||||||||||||||| ||||||| || || ||||||||
Sbjct: 11 caagcgcgagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactc 70
Query: 361 cgctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcga 420
||| ||||| |||||| | | ||||||||||| ||||| ||||||||||||||||
Sbjct: 71 cgccggcaccgtcaccgcatattacctgtcgtcgcagggtccgacgcacgacgagatcga 130
Query: 421 cttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcac 480
||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||||||||
Sbjct: 131 cttcgagttcctgggcaacgtcaccggcgagccatacacgctgcacaccaacgtgttcac 190
Query: 481 gcgcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgcctt 540
|| || |||||||||||||||||||||||||||||||||||||| ||||||| | |||
Sbjct: 191 gcaggggcagggccagcgggagcagcagttccgcctctggttcgatcctaccaacgactt 250
Query: 541 ccacacctactccatcctgtggaacccgcagcacgtgatcttc 583
|||||||||||||||||| ||||||||| ||||| | ||||||
Sbjct: 251 ccacacctactccatcctctggaacccgaagcacatcatcttc 293
>gb|CA024504.1|CA024504 HZ49H21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49H21
5-PRIME, mRNA sequence
Length = 562
Score = 295 bits (149), Expect = 1e-078
Identities = 256/289 (88%), Gaps = 2/289 (0%)
Strand = Plus / Plus
Query: 280 gtccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagat 339
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
Sbjct: 268 gtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 327
Query: 340 caagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccaggg 399
|||||| || || |||||||| || ||||| |||||| | | |||||||||||| |||||
Sbjct: 328 caagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcaggg 387
Query: 400 cgacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctaca 458
| || ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||
Sbjct: 388 -gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctaca 446
Query: 459 cgctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctct 518
|||||||||||||||||||||||| || || ||||| |||||||||||||| |||||||
Sbjct: 447 cgctgcacaccaacgtgttcacgcaggggcaaggccaacgggagcagcagtttcgcctct 506
Query: 519 ggttcgaccctaccactgccttccacacctactccatcctgtggaaccc 567
||||||| || |||| | |||||||||||||||||||| ||||||||
Sbjct: 507 ggttcgatcccaccaacgatttccacacctactccatcctctggaaccc 555
>gb|BF629221.2|BF629221 HVSMEb0010F24f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010F24f, mRNA sequence
Length = 737
Score = 293 bits (148), Expect = 4e-078
Identities = 255/288 (88%), Gaps = 2/288 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 195 tccggctccgggttccaatccaagcacgagtacctgttcggcaagatcgacatgcagctc 254
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 255 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 313
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 314 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 373
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||| ||||||||
Sbjct: 374 gctgcacaccaacgtgttcacgcaggggcagggccaacgggagcaacagttgcgcctctg 433
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaaccc 567
|||||| || |||| | |||||||||||||||||| || ||||||||
Sbjct: 434 gttcgatcccaccaacgacttccacacctactccattctttggaaccc 481
>gb|BE195774.3|BE195774 HVSMEh0090G19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090G19f, mRNA sequence
Length = 921
Score = 293 bits (148), Expect = 4e-078
Identities = 240/271 (88%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||
Sbjct: 210 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcaactc 269
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || ||||||||||| ||||| || ||| ||| |||||||||||| |||||
Sbjct: 270 aagctcgtccccggcaactccgccggcaccgtaaccgcctactacctgtcgtcgcagggt 329
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 330 cctacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 389
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 390 ctgcacaccaacgtgttcacgcangggcagggccagcgggagcagcagttccgcctctgg 449
Query: 521 ttcgaccctaccactgccttccacacctact 551
||||| || |||| | ||| ||||||||||
Sbjct: 450 ttcgatcccaccaacgactttcacacctact 480
>gb|BF628305.2|BF628305 HVSMEb0003K21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003K21f, mRNA sequence
Length = 497
Score = 285 bits (144), Expect = 9e-076
Identities = 278/320 (86%), Gaps = 2/320 (0%)
Strand = Plus / Plus
Query: 184 cggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtgga 243
||||||||||| ||| ||| | |||||| ||||||| || |||||||| ||||| || ||
Sbjct: 178 cggcaacttcttccatgactcggagatgtcctggggggacggccgcgggaaggtcgtcga 237
Query: 244 cggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtccaa 303
| || | |||||||| |||| ||||| ||| || | ||||||||| |||||||||||
Sbjct: 238 cagcagccgcgggctcaacctcacgctcgacaagacctgcggctccggcttccagtccaa 297
Query: 304 gagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgc 363
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 298 gagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgc 357
Query: 364 tggcacggtcaccaccttctacctgtcgtcccagggcgac-gcgcacgacgagatcgact 422
||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 358 cggcaccgtcaccaccttctacctgtcgtcgcaggg-gacggcgcacgacgagatcgact 416
Query: 423 tcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgc 482
||||||||||| | ||||| | ||| |||||||||||||||||||||||||||||| |||
Sbjct: 417 tcgagttcctgtgtaacgtcaccggcgagccctacacgctgcacaccaacgtgttcgcgc 476
Query: 483 gcggacagggccagcgggag 502
|| ||||| |||||||||
Sbjct: 477 aggggcaggggcagcgggag 496
>gb|BF618579.2|BF618579 HVSMEc0006G01f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0006G01f, mRNA sequence
Length = 557
Score = 285 bits (144), Expect = 9e-076
Identities = 254/288 (88%), Gaps = 2/288 (0%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct: 207 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 266
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||| || || |||||||| || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 267 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 325
Query: 401 gacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacac 459
| || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 326 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 385
Query: 460 gctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctg 519
||||||||||||||||||||||| || |||||||| |||||||| ||||| ||||||||
Sbjct: 386 gctgcacaccaacgtgttcacgcatgggcagggccaacgggagcaacagtttcgcctctg 445
Query: 520 gttcgaccctaccactgccttccacacctactccatcctgtggaaccc 567
|||||| | |||| | |||||||||||||||||| || ||||||||
Sbjct: 446 gttcgaatccaccaacgacttccacacctactccattctttggaaccc 493
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 79,022
Number of Sequences: 312970
Number of extensions: 79022
Number of successful extensions: 23389
Number of sequences better than 0.5: 196
Number of HSP's better than 0.5 without gapping: 195
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 22869
Number of HSP's gapped (non-prelim): 390
length of query: 678
length of database: 175,134,539
effective HSP length: 19
effective length of query: 659
effective length of database: 169,188,109
effective search space: 111494963831
effective search space used: 111494963831
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)