BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2647494.2.1
(730 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ446926.1|BJ446926 BJ446926 K. Sato unpublished cDNA li... 547 e-154
gb|BJ452393.1|BJ452393 BJ452393 K. Sato unpublished cDNA li... 547 e-154
gb|BQ764384.1|BQ764384 EBan01_SQ005_O14_R anther, yellow st... 547 e-154
gb|BU970263.1|BU970263 HB14C03r BC Hordeum vulgare subsp. v... 535 e-151
gb|BE195300.3|BE195300 HVSMEh0088N14f Hordeum vulgare 5-45 ... 527 e-148
gb|BJ459941.1|BJ459941 BJ459941 K. Sato unpublished cDNA li... 502 e-141
gb|BU974832.1|BU974832 HB29E01r BC Hordeum vulgare subsp. v... 470 e-131
gb|BE420881.1|BE420881 HWM003.E06 ITEC HWM Barley Leaf Libr... 452 e-126
gb|BU971214.1|BU971214 HB16P06r BC Hordeum vulgare subsp. v... 452 e-126
gb|BI946826.1|BI946826 HVSMEl0002G22f Hordeum vulgare spike... 436 e-121
gb|BG343325.2|BG343325 HVSMEg0005G18f Hordeum vulgare pre-a... 436 e-121
gb|AV914939.1|AV914939 AV914939 K. Sato unpublished cDNA li... 436 e-121
gb|AV933250.1|AV933250 AV933250 K. Sato unpublished cDNA li... 436 e-121
gb|AV933811.1|AV933811 AV933811 K. Sato unpublished cDNA li... 436 e-121
gb|BJ469177.1|BJ469177 BJ469177 K. Sato unpublished cDNA li... 436 e-121
gb|BJ469427.1|BJ469427 BJ469427 K. Sato unpublished cDNA li... 436 e-121
gb|BJ471269.1|BJ471269 BJ471269 K. Sato unpublished cDNA li... 436 e-121
gb|BJ471396.1|BJ471396 BJ471396 K. Sato unpublished cDNA li... 436 e-121
gb|BU988115.1|BU988115 HF16L08r HF Hordeum vulgare subsp. v... 436 e-121
gb|CA028173.1|CA028173 HZ61D09r HZ Hordeum vulgare subsp. v... 436 e-121
gb|CV054850.1|CV054850 BNEL114a3 Barley EST endosperm libra... 436 e-121
gb|CV057066.1|CV057066 BNEL23f5 Barley EST endosperm librar... 436 e-121
gb|CV058991.1|CV058991 BNEL43b9 Barley EST endosperm librar... 436 e-121
gb|CV062985.1|CV062985 BNEL85c9 Barley EST endosperm librar... 436 e-121
gb|CV063901.1|CV063901 BNEL94d7 Barley EST endosperm librar... 436 e-121
gb|CV059929.1|CV059929 BNEL52e12 Barley EST endosperm libra... 430 e-119
gb|CV055377.1|CV055377 BNEL119h7 Barley EST endosperm libra... 428 e-118
gb|CV064310.1|CV064310 BNEL9E12 Barley EST endosperm librar... 428 e-118
gb|CV057906.1|CV057906 BNEL32b7 Barley EST endosperm librar... 426 e-118
gb|AL508760.1|AL508760 AL508760 Hordeum vulgare Barke devel... 424 e-117
gb|AV915127.1|AV915127 AV915127 K. Sato unpublished cDNA li... 422 e-117
gb|BU973650.1|BU973650 HB25J10r BC Hordeum vulgare subsp. v... 422 e-117
gb|BE454423.1|BE454423 HVSMEh0094G14f Hordeum vulgare 5-45 ... 420 e-116
gb|CV054411.1|CV054411 BNEL10C11 Barley EST endosperm libra... 416 e-115
gb|BJ474003.1|BJ474003 BJ474003 K. Sato unpublished cDNA li... 408 e-112
gb|BQ470907.1|BQ470907 HX04G11r HX Hordeum vulgare subsp. v... 406 e-112
gb|CV063002.1|CV063002 BNEL85e3 Barley EST endosperm librar... 396 e-109
gb|AV920058.1|AV920058 AV920058 K. Sato unpublished cDNA li... 394 e-108
gb|BU990501.1|BU990501 HF25D20r HF Hordeum vulgare subsp. v... 392 e-108
gb|AV920164.1|AV920164 AV920164 K. Sato unpublished cDNA li... 389 e-107
gb|BU999885.1|BU999885 HS17C05u HS Hordeum vulgare subsp. v... 389 e-107
gb|AL511263.1|AL511263 AL511263 Hordeum vulgare Barke devel... 387 e-106
gb|CA001551.1|CA001551 HS17G11u HS Hordeum vulgare subsp. v... 387 e-106
gb|BQ765353.1|BQ765353 EBro03_SQ006_N19_R root, 3 week, wat... 383 e-105
gb|AL508009.1|AL508009 AL508009 Hordeum vulgare Barke devel... 375 e-102
gb|BJ474724.1|BJ474724 BJ474724 K. Sato unpublished cDNA li... 369 e-101
gb|BJ471447.1|BJ471447 BJ471447 K. Sato unpublished cDNA li... 347 3e-094
gb|CA026296.1|CA026296 HZ55I02r HZ Hordeum vulgare subsp. v... 339 8e-092
gb|BJ453527.1|BJ453527 BJ453527 K. Sato unpublished cDNA li... 333 5e-090
gb|BJ474040.1|BJ474040 BJ474040 K. Sato unpublished cDNA li... 329 7e-089
gb|AV935689.1|AV935689 AV935689 K. Sato unpublished cDNA li... 321 2e-086
gb|AV920259.1|AV920259 AV920259 K. Sato unpublished cDNA li... 319 7e-086
gb|BU982333.1|BU982333 HA26D10r HA Hordeum vulgare subsp. v... 317 3e-085
gb|CA028029.1|CA028029 HZ60M14r HZ Hordeum vulgare subsp. v... 317 3e-085
gb|BJ448691.1|BJ448691 BJ448691 K. Sato unpublished cDNA li... 307 3e-082
gb|BJ456415.1|BJ456415 BJ456415 K. Sato unpublished cDNA li... 307 3e-082
gb|BQ470013.1|BQ470013 HX01I07T HX Hordeum vulgare subsp. v... 303 4e-081
gb|AL503840.1|AL503840 AL503840 Hordeum vulgare Barke roots... 299 7e-080
gb|BF621409.2|BF621409 HVSMEa0006N07f Hordeum vulgare seedl... 299 7e-080
gb|BJ451497.1|BJ451497 BJ451497 K. Sato unpublished cDNA li... 299 7e-080
gb|BM375802.2|BM375802 EBem06_SQ004_H08_R embryo, 21 DPA, n... 299 7e-080
gb|BI780033.2|BI780033 EBma08_SQ001_D13_R maternal, 28 DPA,... 299 7e-080
gb|BQ763974.1|BQ763974 EBro03_SQ005_M24_R root, 3 week, wat... 299 7e-080
gb|BF628196.3|BF628196 HVSMEb0003G07f Hordeum vulgare seedl... 291 2e-077
gb|BQ762997.1|BQ762997 EBro02_SQ006_G19_R root, 3 week, hyd... 291 2e-077
gb|CA019359.1|CA019359 HV11L22r HV Hordeum vulgare subsp. v... 291 2e-077
gb|CA020734.1|CA020734 HZ37H02r HZ Hordeum vulgare subsp. v... 291 2e-077
gb|CA023718.1|CA023718 HZ47D02r HZ Hordeum vulgare subsp. v... 291 2e-077
gb|BJ454926.1|BJ454926 BJ454926 K. Sato unpublished cDNA li... 287 3e-076
gb|BF259564.2|BF259564 HVSMEf0019K17f Hordeum vulgare seedl... 280 6e-074
gb|BJ458993.1|BJ458993 BJ458993 K. Sato unpublished cDNA li... 280 6e-074
gb|BG365474.1|BG365474 HVSMEi0002N11f Hordeum vulgare 20 DA... 270 6e-071
gb|BU984086.1|BU984086 HA31P04r HA Hordeum vulgare subsp. v... 260 6e-068
gb|BM096730.2|BM096730 EBma07_SQ001_I06_R maternal, 21 DPA,... 256 9e-067
gb|BJ473889.1|BJ473889 BJ473889 K. Sato unpublished cDNA li... 248 2e-064
gb|BI953798.1|BI953798 HVSMEm0014I09f Hordeum vulgare green... 232 1e-059
gb|CA017463.1|CA017463 HV05E12r HV Hordeum vulgare subsp. v... 232 1e-059
gb|AJ431794.1|AJ431794 AJ431794 S00002 Hordeum vulgare subs... 222 1e-056
gb|CD662904.1|CD662904 UCRHV18_03cc12_b1 Drought-stressed D... 218 2e-055
gb|CV059740.1|CV059740 BNEL50d9 Barley EST endosperm librar... 208 2e-052
gb|BI954045.1|BI954045 HVSMEm0015P15f Hordeum vulgare green... 200 5e-050
gb|BU988488.1|BU988488 HF17M17r HF Hordeum vulgare subsp. v... 192 1e-047
gb|AL511916.1|AL511916 AL511916 Hordeum vulgare Barke devel... 188 2e-046
gb|CA016993.1|CA016993 HV05E12u HV Hordeum vulgare subsp. v... 186 7e-046
gb|BU982375.1|BU982375 HA26F16r HA Hordeum vulgare subsp. v... 174 3e-042
gb|BQ662367.1|BQ662367 HS02A19u HS Hordeum vulgare subsp. v... 161 4e-038
gb|BJ476089.1|BJ476089 BJ476089 K. Sato unpublished cDNA li... 159 2e-037
gb|CK124256.1|CK124256 BES1824108b24 BES1824 Hordeum vulgar... 159 2e-037
gb|BM376330.2|BM376330 EBma01_SQ003_D14_R maternal, 4 DPA, ... 155 2e-036
gb|CD662850.1|CD662850 UCRHV18_03bd11_b1 Drought-stressed D... 155 2e-036
gb|BI777996.2|BI777996 EBro07_SQ001_M03_R root, 3 week, red... 151 4e-035
gb|BE603075.2|BE603075 HVSMEh0101N08f Hordeum vulgare 5-45 ... 143 9e-033
gb|BI954478.1|BI954478 HVSMEm0018C12f Hordeum vulgare green... 135 2e-030
gb|AV927891.1|AV927891 AV927891 K. Sato unpublished cDNA li... 133 9e-030
gb|CA015861.1|CA015861 HV11L22u HV Hordeum vulgare subsp. v... 133 9e-030
gb|AL501256.1|AL501256 AL501256 Hordeum vulgare Barke roots... 113 8e-024
gb|CX662340.1|CX662340 EST 119 Expressed sequences from Bar... 111 3e-023
gb|BF631206.2|BF631206 HVSMEb0015E09f Hordeum vulgare seedl... 107 5e-022
gb|BQ758193.1|BQ758193 EBma01_SQ003_M17_R maternal, 4 DPA, ... 92 3e-017
gb|BQ762061.1|BQ762061 EBpi01_SQ005_O15_R pistil, 1 DPA, no... 82 3e-014
gb|BU982537.1|BU982537 HA26N12r HA Hordeum vulgare subsp. v... 64 7e-009
gb|CV063895.1|CV063895 BNEL94d11 Barley EST endosperm libra... 58 4e-007
gb|BE437581.1|BE437581 SFR005.C10F990701 ITEC SFR Barley Le... 46 0.002
gb|BE437640.1|BE437640 SFR005.H10F990715 ITEC SFR Barley Le... 46 0.002
gb|BE437781.1|BE437781 SFR007.D11F990621 ITEC SFR Barley Le... 46 0.002
gb|BE437837.1|BE437837 SFR008.A08F990625 ITEC SFR Barley Le... 46 0.002
gb|BE438041.1|BE438041 SFR010.B12F990603 ITEC SFR Barley Le... 46 0.002
gb|AL501237.1|AL501237 AL501237 Hordeum vulgare Barke roots... 46 0.002
gb|AL503819.1|AL503819 AL503819 Hordeum vulgare Barke roots... 46 0.002
gb|AL503980.1|AL503980 AL503980 Hordeum vulgare Barke roots... 46 0.002
gb|AL504973.1|AL504973 AL504973 Hordeum vulgare Barke roots... 46 0.002
gb|AL507347.1|AL507347 AL507347 Hordeum vulgare Barke devel... 46 0.002
gb|AW982445.2|AW982445 HVSMEg0003F04f Hordeum vulgare pre-a... 46 0.002
gb|BG343973.1|BG343973 HVSMEg0007E09f Hordeum vulgare pre-a... 46 0.002
gb|BI948778.1|BI948778 HVSMEl0010M15f Hordeum vulgare spike... 46 0.002
gb|BI953721.1|BI953721 HVSMEm0014A16f Hordeum vulgare green... 46 0.002
gb|BI954104.1|BI954104 HVSMEm0016D11f Hordeum vulgare green... 46 0.002
gb|BF626910.3|BF626910 HVSMEb0001K18f Hordeum vulgare seedl... 46 0.002
gb|BG300691.2|BG300691 HVSMEb0018A08f Hordeum vulgare seedl... 46 0.002
gb|AW982188.3|AW982188 HVSMEg0002C17f Hordeum vulgare pre-a... 46 0.002
gb|BG343432.2|BG343432 HVSMEg0005L22f Hordeum vulgare pre-a... 46 0.002
gb|BE196636.3|BE196636 HVSMEh0092N14f Hordeum vulgare 5-45 ... 46 0.002
gb|BF266011.3|BF266011 HV_CEa0013O18f Hordeum vulgare seedl... 46 0.002
gb|BF065276.3|BF065276 HV_CEb0024O17f Hordeum vulgare seedl... 46 0.002
gb|AV910166.1|AV910166 AV910166 K. Sato unpublished cDNA li... 46 0.002
gb|AV912344.1|AV912344 AV912344 K. Sato unpublished cDNA li... 46 0.002
gb|AV914911.1|AV914911 AV914911 K. Sato unpublished cDNA li... 46 0.002
gb|AV920029.1|AV920029 AV920029 K. Sato unpublished cDNA li... 46 0.002
gb|AV925118.1|AV925118 AV925118 K. Sato unpublished cDNA li... 46 0.002
gb|AV925974.1|AV925974 AV925974 K. Sato unpublished cDNA li... 46 0.002
gb|AV928758.1|AV928758 AV928758 K. Sato unpublished cDNA li... 46 0.002
gb|AV933987.1|AV933987 AV933987 K. Sato unpublished cDNA li... 46 0.002
gb|AV936233.1|AV936233 AV936233 K. Sato unpublished cDNA li... 46 0.002
gb|AJ460906.1|AJ460906 AJ460906 S00002 Hordeum vulgare subs... 46 0.002
gb|BJ447609.1|BJ447609 BJ447609 K. Sato unpublished cDNA li... 46 0.002
gb|BJ453561.1|BJ453561 BJ453561 K. Sato unpublished cDNA li... 46 0.002
gb|BJ453841.1|BJ453841 BJ453841 K. Sato unpublished cDNA li... 46 0.002
gb|BJ453865.1|BJ453865 BJ453865 K. Sato unpublished cDNA li... 46 0.002
gb|BJ454565.1|BJ454565 BJ454565 K. Sato unpublished cDNA li... 46 0.002
gb|BJ461104.1|BJ461104 BJ461104 K. Sato unpublished cDNA li... 46 0.002
gb|BJ461375.1|BJ461375 BJ461375 K. Sato unpublished cDNA li... 46 0.002
gb|BJ461400.1|BJ461400 BJ461400 K. Sato unpublished cDNA li... 46 0.002
gb|BJ462366.1|BJ462366 BJ462366 K. Sato unpublished cDNA li... 46 0.002
gb|BJ463937.1|BJ463937 BJ463937 K. Sato unpublished cDNA li... 46 0.002
gb|BJ466203.1|BJ466203 BJ466203 K. Sato unpublished cDNA li... 46 0.002
gb|BJ469358.1|BJ469358 BJ469358 K. Sato unpublished cDNA li... 46 0.002
gb|BJ474662.1|BJ474662 BJ474662 K. Sato unpublished cDNA li... 46 0.002
gb|BQ468719.1|BQ468719 HM02B23r HM Hordeum vulgare subsp. v... 46 0.002
gb|BQ470367.1|BQ470367 HX02L17r HX Hordeum vulgare subsp. v... 46 0.002
gb|BQ665246.1|BQ665246 HX02L17u HX Hordeum vulgare subsp. v... 46 0.002
gb|BM373261.2|BM373261 EBma04_SQ003_M04_R maternal, 10 DPA,... 46 0.002
gb|BM369955.2|BM369955 EBro08_SQ002_H11_R root, 3 week, dro... 46 0.002
gb|BQ754213.1|BQ754213 EBca01_SQ003_D10_R carpel, pre-anthe... 46 0.002
gb|BQ758413.1|BQ758413 EBma05_SQ003_B22_R maternal, 12 DPA,... 46 0.002
gb|BQ768882.1|BQ768882 EBro08_SQ012_N20_R root, 3 week, dro... 46 0.002
gb|BU970714.1|BU970714 HB15H09r BC Hordeum vulgare subsp. v... 46 0.002
gb|BU977128.1|BU977128 HA10O05r HA Hordeum vulgare subsp. v... 46 0.002
gb|BU978615.1|BU978615 HA13M01r HA Hordeum vulgare subsp. v... 46 0.002
gb|BU981329.1|BU981329 HA23F09r HA Hordeum vulgare subsp. v... 46 0.002
gb|BU985201.1|BU985201 HF06G23r HF Hordeum vulgare subsp. v... 46 0.002
gb|BU985436.1|BU985436 HF07D05r HF Hordeum vulgare subsp. v... 46 0.002
gb|BU988146.1|BU988146 HF16M17r HF Hordeum vulgare subsp. v... 46 0.002
gb|BU990314.1|BU990314 HF24K17r HF Hordeum vulgare subsp. v... 46 0.002
gb|BU990376.1|BU990376 HF24N13r HF Hordeum vulgare subsp. v... 46 0.002
gb|BU993968.1|BU993968 HM05C23r HM Hordeum vulgare subsp. v... 46 0.002
gb|BU994643.1|BU994643 HM07L14r HM Hordeum vulgare subsp. v... 46 0.002
gb|BU995686.1|BU995686 HM11A14r HM Hordeum vulgare subsp. v... 46 0.002
gb|BU997344.1|BU997344 HI07L09r HI Hordeum vulgare subsp. v... 46 0.002
gb|CA007273.1|CA007273 HU07G08r HU Hordeum vulgare subsp. v... 46 0.002
gb|CA007342.1|CA007342 HU07K05r HU Hordeum vulgare subsp. v... 46 0.002
gb|CA009276.1|CA009276 HU13K21r HU Hordeum vulgare subsp. v... 46 0.002
gb|CA020395.1|CA020395 HZ36C17r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA022152.1|CA022152 HZ42E24r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA022992.1|CA022992 HZ44O24r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA023423.1|CA023423 HZ46D06r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA023636.1|CA023636 HZ46O12r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA023678.1|CA023678 HZ47A17r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA024432.1|CA024432 HZ49E19r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA025850.1|CA025850 HZ53F05r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA026384.1|CA026384 HZ55M06r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA026487.1|CA026487 HZ56A23r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA026493.1|CA026493 HZ56B07r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA027376.1|CA027376 HZ58L15r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA027511.1|CA027511 HZ59C16r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA030318.1|CA030318 HX06L09r HX Hordeum vulgare subsp. v... 46 0.002
gb|CB858616.1|CB858616 HI07L09w HI Hordeum vulgare subsp. v... 46 0.002
gb|CB877191.1|CB877191 HP03O08T HP Hordeum vulgare subsp. v... 46 0.002
gb|CB878143.1|CB878143 HP07H19T HP Hordeum vulgare subsp. v... 46 0.002
gb|CB879838.1|CB879838 HP03O08w HP Hordeum vulgare subsp. v... 46 0.002
gb|CB880174.1|CB880174 HM05L14w HM Hordeum vulgare subsp. v... 46 0.002
gb|CB880628.1|CB880628 HM07C23w HM Hordeum vulgare subsp. v... 46 0.002
gb|CV061017.1|CV061017 BNEL64a2 Barley EST endosperm librar... 46 0.002
gb|CV061123.1|CV061123 BNEL65b9 Barley EST endosperm librar... 46 0.002
gb|CK124960.1|CK124960 BES1824111A2d04 BES1824 Hordeum vulg... 46 0.002
gb|AJ463340.1|AJ463340 AJ463340 S00002 Hordeum vulgare subs... 42 0.025
gb|BE420755.1|BE420755 HWM002.B12 ITEC HWM Barley Leaf Libr... 40 0.099
gb|BE437464.1|BE437464 SFR004.A06F990621 ITEC SFR Barley Le... 40 0.099
gb|AL502256.1|AL502256 AL502256 Hordeum vulgare Barke roots... 40 0.099
gb|AL505072.1|AL505072 AL505072 Hordeum vulgare Barke roots... 40 0.099
gb|AL507811.1|AL507811 AL507811 Hordeum vulgare Barke devel... 40 0.099
gb|BE602809.1|BE602809 HVSMEh0101M21f Hordeum vulgare 5-45 ... 40 0.099
gb|BI947712.1|BI947712 HVSMEl0006J03f Hordeum vulgare spike... 40 0.099
gb|BI948013.1|BI948013 HVSMEl0007N11f Hordeum vulgare spike... 40 0.099
gb|BI952469.1|BI952469 HVSMEm0006J03f Hordeum vulgare green... 40 0.099
gb|BI952775.1|BI952775 HVSMEm0007L11f Hordeum vulgare green... 40 0.099
gb|BI952813.1|BI952813 HVSMEm0007N11f Hordeum vulgare green... 40 0.099
gb|BF261364.2|BF261364 HV_CEa0001B11f Hordeum vulgare seedl... 40 0.099
gb|BF264530.2|BF264530 HV_CEa0009K19f Hordeum vulgare seedl... 40 0.099
gb|BG418338.1|BG418338 HVSMEk0022F21f Hordeum vulgare testa... 40 0.099
gb|AW982254.3|AW982254 HVSMEg0002I11f Hordeum vulgare pre-a... 40 0.099
gb|BG366882.2|BG366882 HVSMEi0008N01f Hordeum vulgare 20 DA... 40 0.099
gb|BG418127.2|BG418127 HVSMEk0021H19f Hordeum vulgare testa... 40 0.099
gb|BM369081.2|BM369081 EBem07_SQ002_I04_R embryo, 28 DPA, n... 40 0.099
gb|BM373201.2|BM373201 EBma04_SQ003_H24_R maternal, 10 DPA,... 40 0.099
gb|BM373286.2|BM373286 EBma04_SQ003_N11_R maternal, 10 DPA,... 40 0.099
gb|BQ767374.1|BQ767374 EBro08_SQ008_A21_R root, 3 week, dro... 40 0.099
gb|BQ768796.1|BQ768796 EBro08_SQ012_O16 _R root, 3 week, dr... 40 0.099
gb|BU972433.1|BU972433 HB21K02r BC Hordeum vulgare subsp. v... 40 0.099
gb|BU987820.1|BU987820 HF15N17r HF Hordeum vulgare subsp. v... 40 0.099
gb|BU989442.1|BU989442 HF21L24r HF Hordeum vulgare subsp. v... 40 0.099
gb|CA000743.1|CA000743 HS07A18u HS Hordeum vulgare subsp. v... 40 0.099
gb|CA002285.1|CA002285 HS07A18r HS Hordeum vulgare subsp. v... 40 0.099
gb|CA030280.1|CA030280 HX06J16r HX Hordeum vulgare subsp. v... 40 0.099
gb|CA030710.1|CA030710 HX07O08r HX Hordeum vulgare subsp. v... 40 0.099
gb|CB874881.1|CB874881 HX06J16w HX Hordeum vulgare subsp. v... 40 0.099
gb|CB875302.1|CB875302 HX07O08w HX Hordeum vulgare subsp. v... 40 0.099
gb|CB883098.1|CB883098 HQ01D04w HQ Hordeum vulgare subsp. v... 40 0.099
gb|AV933870.1|AV933870 AV933870 K. Sato unpublished cDNA li... 38 0.39
gb|BJ471502.1|BJ471502 BJ471502 K. Sato unpublished cDNA li... 38 0.39
gb|BU977129.1|BU977129 HA10O05u HA Hordeum vulgare subsp. v... 38 0.39
gb|BU981074.1|BU981074 HA22J02r HA Hordeum vulgare subsp. v... 38 0.39
>gb|BJ446926.1|BJ446926 BJ446926 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak15g01 5', mRNA sequence
Length = 623
Score = 547 bits (276), Expect = e-154
Identities = 420/468 (89%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 499 tgtcatgcaccactggcgtacatacgagtccattccttcgctgtctcaacagcttcagct 440
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| ||||||||||||||||| || | || |||||||||||||||||||||||||| |||
Sbjct: 439 tcattggatttccagtgttttgcgacattctctgagagaggatcatctgggtttggagcg 380
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 379 ctcagcagtgcctgaatgctcaaaagaacagtgcgtatctgaagagctggactccacttg 320
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| || |||||||||||||| ||||||||||||||||| || || ||||| ||||||
Sbjct: 319 tccttcaggatgtcgaggcatattctaccaagcttgtcaatgttggggtggtatattttt 260
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| |||||||| || |||||||| ||||||||||| || ||||| |||||||||
Sbjct: 259 gtcagaaacctaactttaggagcagccatcggatattcctcgggtaagaaaagttcaagc 200
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
||||| ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 199 ttgaagactccaccttcgtagggcgactgcgcggggccaaggaccatgacattgaagtag 140
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| |||||||| |||||||| ||||| |||||||| ||||| |||||||| ||||||
Sbjct: 139 cgcatgttctcctcggacggcgaggcgctgatccccggcgctggctcgctgagcagccgc 80
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccatggaa 690
||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 79 tgcgtctccttgatgatccggcgcgggaggttgctgttggccatggaa 32
>gb|BJ452393.1|BJ452393 BJ452393 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38n17 5', mRNA sequence
Length = 694
Score = 547 bits (276), Expect = e-154
Identities = 420/468 (89%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 488 tgtcatgcaccactggcgtacatacgagtccattccttcgctgtctcaacagcttcagct 429
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| ||||||||||||||||| || | || |||||||||||||||||||||||||| |||
Sbjct: 428 tcattggatttccagtgttttgcgacattctctgagagaggatcatctgggtttggagcg 369
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 368 ctcagcagtgcctgaatgctcaaaagaacagtgcgtatctgaagagctggactccacttg 309
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| || |||||||||||||| ||||||||||||||||| || || ||||| ||||||
Sbjct: 308 tccttcaggatgtcgaggcatattctaccaagcttgtcaatgttggggtggtatattttt 249
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| |||||||| || |||||||| ||||||||||| || ||||| |||||||||
Sbjct: 248 gtcagaaacctaactttaggagcagccatcggatattcctcgggtaagaaaagttcaagc 189
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
||||| ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 188 ttgaagactccaccttcgtagggcgactgcgcggggccaaggaccatgacattgaagtag 129
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| |||||||| |||||||| ||||| |||||||| ||||| |||||||| ||||||
Sbjct: 128 cgcatgttctcctcggacggcgaggcgctgatccccggcgctggctcgctgagcagccgc 69
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccatggaa 690
||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 68 tgcgtctccttgatgatccggcgcgggaggttgctgttggccatggaa 21
>gb|BQ764384.1|BQ764384 EBan01_SQ005_O14_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_O14 5', mRNA sequence
Length = 620
Score = 547 bits (276), Expect = e-154
Identities = 420/468 (89%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 499 tgtcatgcaccactggcgtacatacgagtccattccttcgctgtctcaacagcttcagct 440
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| ||||||||||||||||| || | || |||||||||||||||||||||||||| |||
Sbjct: 439 tcattggatttccagtgttttgcgacattctctgagagaggatcatctgggtttggagcg 380
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 379 ctcagcagtgcctgaatgctcaaaagaacagtgcgtatctgaagagctggactccacttg 320
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| || |||||||||||||| ||||||||||||||||| || || ||||| ||||||
Sbjct: 319 tccttcaggatgtcgaggcatattctaccaagcttgtcaatgttggggtggtatattttt 260
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| |||||||| || |||||||| ||||||||||| || ||||| |||||||||
Sbjct: 259 gtcagaaacctaactttaggagcagccatcggatattcctcgggtaagaaaagttcaagc 200
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
||||| ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 199 ttgaagactccaccttcgtagggcgactgcgcggggccaaggaccatgacattgaagtag 140
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| |||||||| |||||||| ||||| |||||||| ||||| |||||||| ||||||
Sbjct: 139 cgcatgttctcctcggacggcgaggcgctgatccccggcgctggctcgctgagcagccgc 80
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccatggaa 690
||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 79 tgcgtctccttgatgatccggcgcgggaggttgctgttggccatggaa 32
>gb|BU970263.1|BU970263 HB14C03r BC Hordeum vulgare subsp. vulgare cDNA clone HB14C03
5-PRIME, mRNA sequence
Length = 621
Score = 535 bits (270), Expect = e-151
Identities = 414/462 (89%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 495 tgtcatgcaccactggcgtacatacgagtccattccttcgctgtctcaacagcttcagct 436
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| ||||||||||||||||| || | || |||||||||||||||||||||||||| |||
Sbjct: 435 tcattggatttccagtgttttgcgacattctctgagagaggatcatctgggtttggagcg 376
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 375 ctcagcagtgcctgaatgctcaaaagaacagtgcgtatctgaagagctggactccacttg 316
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| || |||||||||||||| ||||||||||||||||| || || ||||| ||||||
Sbjct: 315 tccttcaggatgtcgaggcatattctaccaagcttgtcaatgttggggtggtatattttt 256
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| |||||||| || |||||||| ||||||||||| || ||||| |||||||||
Sbjct: 255 gtcagaaacctaactttaggagcagccatcggatattcctcgggtaagaaaagttcaagc 196
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
||||| ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 195 ttgaagactccaccttcgtagggcgactgcgcggggccaaggaccatgacattgaagtag 136
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| |||||||| |||||||| ||||| |||||||| ||||| |||||||| ||||||
Sbjct: 135 cgcatgttctcctcggacggcgaggcgctgatccccggcgctggctcgctgagcagccgc 76
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggcc 684
||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 75 tgcgtctccttgatgatccggcgcgggaggttgctgttggcc 34
>gb|BE195300.3|BE195300 HVSMEh0088N14f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088N14f, mRNA sequence
Length = 624
Score = 527 bits (266), Expect = e-148
Identities = 417/468 (89%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | ||||| |||||||| ||||||||||||||| ||||||||||
Sbjct: 502 tgtcatgcaccactggcgtacatacgagtccattccttcgctgtctcacnagcttcagct 443
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||||| || | || |||||||||||||||||||||||||| |||
Sbjct: 442 tcattggatttccagtgttntgcgacattctctgagagaggatcatctgggtttggagcg 383
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 382 ctcagcagtgcctgaatgctcaaaagaacagtgcgtatctgaagagctggactccacttg 323
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| || |||||||||||||| ||||||||||||||||| || || ||||| ||||||
Sbjct: 322 tccttcaggatgtcgaggcatattctaccaagcttgtcaatgttggggtggtatattttt 263
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| |||||||| || |||||||| ||||||||||| || ||||| |||||||||
Sbjct: 262 gtcagaaacctaactttaggagcagccatcggatattcctcgggtaagaaaagttcaagc 203
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
||||| ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 202 ttgaagactccaccttcgtagggcgactgcgcggggccaaggaccatgacattgaagtag 143
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| |||||||| |||||||| ||||| |||||||| ||||| |||||||| ||||||
Sbjct: 142 cgcatgttctcctcggacggcgaggcgctgatccccggcgctggctcgctgagcagccgc 83
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccatggaa 690
||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 82 tgcgtctccttgatgatccggcgcgggaggttgctgttggccatggaa 35
>gb|BJ459941.1|BJ459941 BJ459941 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38n17 3', mRNA sequence
Length = 677
Score = 502 bits (253), Expect = e-141
Identities = 391/437 (89%)
Strand = Plus / Plus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 240 tgtcatgcaccactggcgtacatacgagtccattccttcgctgtctcaacagcttcagct 299
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| ||||||||||||||||| || | || |||||||||||||||||||||||||| |||
Sbjct: 300 tcattggatttccagtgttttgcgacattctctgagagaggatcatctgggtttggagcg 359
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 360 ctcagcagtgcctgaatgctcaaaagaacagtgcgtatctgaagagctggactccacttg 419
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| || |||||||||||||| ||||||||||||||||| || || ||||| ||||||
Sbjct: 420 tccttcaggatgtcgaggcatattctaccaagcttgtcaatgttggggtggtatattttt 479
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| |||||||| || |||||||| ||||||||||| || ||||| |||||||||
Sbjct: 480 gtcagaaacctaactttaggagcagccatcggatattcctcgggtaagaaaagttcaagc 539
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
||||| ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 540 ttgaagactccaccttcgtagggcgactgcgcggggccaaggaccatgacattgaagtag 599
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| |||||||| |||||||| ||||| |||||||| ||||| |||||||| ||||||
Sbjct: 600 cgcatgttctcctcggacggcgaggcgctgatccccggcgctggctcgctgagcagccgc 659
Query: 643 tgcgtctccttgatgat 659
|||||||||||||||||
Sbjct: 660 tgcgtctccttgatgat 676
>gb|BU974832.1|BU974832 HB29E01r BC Hordeum vulgare subsp. vulgare cDNA clone HB29E01
5-PRIME, mRNA sequence
Length = 425
Score = 470 bits (237), Expect = e-131
Identities = 363/405 (89%)
Strand = Plus / Minus
Query: 275 cttcagcttcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggt 334
|||||||||| ||||||||||||||||| || | || ||||||||||||||||||||||
Sbjct: 425 cttcagcttcattggatttccagtgttttgcgacattctctgagagaggatcatctgggt 366
Query: 335 ttggggcgctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggac 394
|||| |||||||| |||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 365 ttggagcgctcagcagtgcctgaatgctcaaaagaacagtgcgtatctgaagagctggac 306
Query: 395 tccatttgtccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggt 454
|||| |||||||| || |||||||||||||| ||||||||||||||||| || || ||||
Sbjct: 305 tccacttgtccttcaggatgtcgaggcatattctaccaagcttgtcaatgttggggtggt 246
Query: 455 aaatttttgtgagaaatctaacttttggggcagccattggatattcctcaggcaagaata 514
| |||||||| ||||| |||||||| || |||||||| ||||||||||| || ||||| |
Sbjct: 245 atatttttgtcagaaacctaactttaggagcagccatcggatattcctcgggtaagaaaa 186
Query: 515 gttcaagcttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacat 574
||||||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||
Sbjct: 185 gttcaagcttgaagactccaccttcgtagggcgactgcgcggggccaaggaccatgacat 126
Query: 575 tgaagtaccgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctga 634
||||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| |||||||
Sbjct: 125 tgaagtagcgcatgttctcctcggacggcgaggcgctgatccccggcgctggctcgctga 66
Query: 635 gaagccgctgcgtctccttgatgattcggcgcgggagattgctgt 679
| ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 65 gcagccgctgcgtctccttgatgatccggcgcgggaggttgctgt 21
>gb|BE420881.1|BE420881 HWM003.E06 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM003.E06, mRNA sequence
Length = 935
Score = 452 bits (228), Expect = e-126
Identities = 381/432 (88%)
Strand = Plus / Minus
Query: 259 ttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatgttgtctgag 318
|||| |||||||||||||| |||||| ||||||| |||||||| | || ||||||
Sbjct: 505 ttcggtgtctcaacagcttaagcttcattggattcccagtgttatcagacattctctgag 446
Query: 319 agaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtagaactgtacgt 378
|||||||||||||||||||| ||||||| |||||||||||||||| ||| | || |||
Sbjct: 445 agaggatcatctgggtttggagcgctcaccagtgcctgaatgctcaaaagaccagtgcgt 386
Query: 379 atctgaagagctggactccatttgtccttaagaatgtcgaggcatatcctaccaagcttg 438
|||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||
Sbjct: 385 atctgaagagctggactccacttgtccttcaggatgtcgaggcatattctaccaagcttg 326
Query: 439 tcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagccattggatat 498
||||| || || ||||| |||||||| ||||| |||||||| || |||||||| ||||||
Sbjct: 325 tcaatgttggggtggtatatttttgtcagaaacctaactttaggagcagccatcggatat 266
Query: 499 tcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgactgcgcgggg 558
||||| || ||||| |||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 265 tcctcgggtaagaaaagttcaagcttgaagactccaccttcgtagggcgactgcgcgggg 206
Query: 559 ccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcgctaatcccc 618
||||||| ||||||||||||||| ||||| |||||||| |||||||| ||||| ||||||
Sbjct: 205 ccaaggaccatgacattgaagtagcgcatgttctcctcggacggcgaggcgctgatcccc 146
Query: 619 ggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcgggagattgctg 678
|| ||||| ||||| || ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 145 ggcgctggctcgctcagcagccgctgcgtctccttgatgatccggcgcgggaggttgctg 86
Query: 679 ttggccatggaa 690
||||||||||||
Sbjct: 85 ttggccatggaa 74
>gb|BU971214.1|BU971214 HB16P06r BC Hordeum vulgare subsp. vulgare cDNA clone HB16P06
5-PRIME, mRNA sequence
Length = 412
Score = 452 bits (228), Expect = e-126
Identities = 336/372 (90%)
Strand = Plus / Minus
Query: 313 tctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtagaact 372
|||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||
Sbjct: 405 tctgagagaggatcatctgggtttggagcgctcagcagtgcctgaatgctcaaaagaaca 346
Query: 373 gtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatcctacca 432
|| ||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||
Sbjct: 345 gtgcgtatctgaagagctggactccacttgtccttcaggatgtcgaggcatattctacca 286
Query: 433 agcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagccatt 492
||||||||||| || || ||||| |||||||| ||||| |||||||| || ||||||||
Sbjct: 285 agcttgtcaatgttggggtggtatatttttgtcagaaacctaactttaggagcagccatc 226
Query: 493 ggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgactgc 552
||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 225 ggatattcctcgggtaagaaaagttcaagcttgaagactccaccttcgtagggcgactgc 166
Query: 553 gcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcgcta 612
||||||||||||| ||||||||||||||| ||||| |||||||| |||||||| |||||
Sbjct: 165 gcggggccaaggaccatgacattgaagtagcgcatgttctcctcggacggcgaggcgctg 106
Query: 613 atccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcgggaga 672
|||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 105 atccccggcgctggctcgctgagcagccgctgcgtctccttgatgatccggcgcgggagg 46
Query: 673 ttgctgttggcc 684
||||||||||||
Sbjct: 45 ttgctgttggcc 34
>gb|BI946826.1|BI946826 HVSMEl0002G22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002G22f, mRNA sequence
Length = 829
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 543 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 484
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 483 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 424
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 423 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 364
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 363 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 304
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 303 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 244
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 243 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 184
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 183 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 124
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 123 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 80
>gb|BG343325.2|BG343325 HVSMEg0005G18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005G18f, mRNA sequence
Length = 973
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 537 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 478
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 477 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 418
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 417 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 358
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 357 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 298
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 297 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 238
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 237 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 178
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 177 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 118
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 117 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 74
>gb|AV914939.1|AV914939 AV914939 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9b20 5', mRNA sequence
Length = 612
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 593 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 534
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 533 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 474
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 473 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 414
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 413 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 354
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 353 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 294
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 293 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 234
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 233 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 174
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 173 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 130
>gb|AV933250.1|AV933250 AV933250 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5p21 5', mRNA sequence
Length = 593
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 537 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 478
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 477 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 418
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 417 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 358
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 357 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 298
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 297 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 238
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 237 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 178
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 177 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 118
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 117 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 74
>gb|AV933811.1|AV933811 AV933811 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal9g04 5', mRNA sequence
Length = 605
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 536 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 477
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 476 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 417
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 416 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 357
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 356 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 297
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 296 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 237
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 236 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 177
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 176 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 117
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 116 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 73
>gb|BJ469177.1|BJ469177 BJ469177 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13i18 5', mRNA sequence
Length = 605
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 546 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 487
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 486 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 427
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 426 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 367
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 366 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 307
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 306 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 247
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 246 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 187
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 186 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 127
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 126 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 83
>gb|BJ469427.1|BJ469427 BJ469427 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20p06 5', mRNA sequence
Length = 695
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 536 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 477
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 476 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 417
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 416 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 357
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 356 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 297
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 296 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 237
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 236 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 177
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 176 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 117
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 116 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 73
>gb|BJ471269.1|BJ471269 BJ471269 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17i23 5', mRNA sequence
Length = 636
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 536 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 477
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 476 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 417
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 416 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 357
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 356 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 297
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 296 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 237
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 236 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 177
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 176 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 117
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 116 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 73
>gb|BJ471396.1|BJ471396 BJ471396 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18c24 5', mRNA sequence
Length = 673
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 540 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 481
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 480 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 421
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 420 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 361
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 360 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 301
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 300 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 241
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 240 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 181
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 180 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 121
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 120 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 77
>gb|BU988115.1|BU988115 HF16L08r HF Hordeum vulgare subsp. vulgare cDNA clone HF16L08
5-PRIME, mRNA sequence
Length = 623
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 570 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 511
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 510 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 451
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 450 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 391
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 390 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 331
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 330 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 271
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 270 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 211
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 210 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 151
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 150 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 107
>gb|CA028173.1|CA028173 HZ61D09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61D09
5-PRIME, mRNA sequence
Length = 650
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 583 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 524
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 523 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 464
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 463 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 404
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 403 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 344
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 343 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 284
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 283 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 224
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 223 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 164
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 163 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 120
>gb|CV054850.1|CV054850 BNEL114a3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL114a3 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 712
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 544 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 485
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 484 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 425
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 424 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 365
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 364 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 305
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 304 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 245
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| ||||| || ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 244 ttaaaaacccccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 185
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| |
Sbjct: 184 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagcctc 125
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 124 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 81
>gb|CV057066.1|CV057066 BNEL23f5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL23f5 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 613
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 537 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 478
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 477 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 418
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 417 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 358
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 357 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 298
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 297 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 238
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| ||||| || ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 237 ttaaaaacccccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 178
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| |
Sbjct: 177 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagcctc 118
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 117 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 74
>gb|CV058991.1|CV058991 BNEL43b9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL43b9 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 604
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 544 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 485
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 484 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 425
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 424 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 365
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 364 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 305
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 304 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 245
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| ||||| || ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 244 ttaaaaacccccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 185
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| |
Sbjct: 184 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagcctc 125
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 124 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 81
>gb|CV062985.1|CV062985 BNEL85c9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL85c9 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 715
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 544 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 485
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 484 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 425
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 424 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 365
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 364 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 305
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 304 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 245
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| ||||| || ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 244 ttaaaaacccccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 185
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| |
Sbjct: 184 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagcctc 125
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 124 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 81
>gb|CV063901.1|CV063901 BNEL94d7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94d7 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 658
Score = 436 bits (220), Expect = e-121
Identities = 403/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 544 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 485
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 484 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 425
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 424 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 365
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 364 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 305
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 304 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 245
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| ||||| || ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 244 ttaaaaacccccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 185
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| |
Sbjct: 184 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagcctc 125
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 124 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 81
>gb|CV059929.1|CV059929 BNEL52e12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL52e12 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 633
Score = 430 bits (217), Expect = e-119
Identities = 402/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 537 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 478
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 477 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 418
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || ||| |||||||| || ||||||||||| |||||||||||
Sbjct: 417 cttaagagtgcctggatactcnaaagaactgttcgaatctgaagagccggactccattta 358
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 357 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 298
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 297 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 238
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| ||||| || ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 237 ttaaaaacccccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 178
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| |
Sbjct: 177 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagcctc 118
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 117 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 74
>gb|CV055377.1|CV055377 BNEL119h7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL119h7 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 683
Score = 428 bits (216), Expect = e-118
Identities = 403/464 (86%), Gaps = 1/464 (0%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
||||||||||| || | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 536 tgtcatgcccc-ctggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 478
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 477 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 418
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 417 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 358
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 357 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 298
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 297 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 238
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| ||||| || ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 237 ttaaaaacccccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 178
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| |
Sbjct: 177 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagcctc 118
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 117 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 74
>gb|CV064310.1|CV064310 BNEL9E12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL9E12 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 608
Score = 428 bits (216), Expect = e-118
Identities = 402/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 536 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 477
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 476 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 417
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 416 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 357
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
|| || |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 356 tctttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 297
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 296 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 237
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| ||||| || ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 236 ttaaaaacccccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 177
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| |
Sbjct: 176 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagcctc 117
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 116 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 73
>gb|CV057906.1|CV057906 BNEL32b7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL32b7 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 588
Score = 426 bits (215), Expect = e-118
Identities = 389/447 (87%)
Strand = Plus / Minus
Query: 240 gtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtg 299
|||||| || ||||||||||||||||| ||||||||||| || || ||||||||||||||
Sbjct: 519 gtacagacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtg 460
Query: 300 tttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaat 359
|| |||||||| || |||||||| |||||||| ||||| || || | |||||||| ||
Sbjct: 459 cttggcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggat 400
Query: 360 gctcagtagaactgtacgtatctgaagagctggactccatttgtccttaagaatgtcgag 419
|||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 399 actcaaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaag 340
Query: 420 gcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttt 479
|||||||||||||||||||||||| || ||||| || ||||| || ||||| ||||| ||
Sbjct: 339 gcatatcctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctt 280
Query: 480 tggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaactccaccttc 539
|||||||||||| ||||||||||| || || |||||||| ||||| ||||| || |||||
Sbjct: 279 tggggcagccatcggatattcctcgggtaaaaatagttccagcttaaaaacccccccttc 220
Query: 540 atagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccga 599
||||| |||||||| || |||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 219 gtagggcgactgcgccggcccaaggatcatgacgttgaaataccgcatgttctcctccga 160
Query: 600 cggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgat 659
||||| |||||||||||||| ||||| |||||||| |||| ||||||||||||||||||
Sbjct: 159 gggcgaagcgctaatccccggagctggctcgctgaggagcctctgcgtctccttgatgat 100
Query: 660 tcggcgcgggagattgctgttggccat 686
||| |||||||| ||||||||||||||
Sbjct: 99 tcgtcgcgggaggttgctgttggccat 73
>gb|AL508760.1|AL508760 AL508760 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09L15V 5',
mRNA sequence
Length = 700
Score = 424 bits (214), Expect = e-117
Identities = 401/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 525 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 466
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 465 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 406
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 405 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 346
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 345 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 286
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 285 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 226
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| | |||||| || |||||||||||||| ||||| | |
Sbjct: 225 ttaaaaactcccccttcgtagggcgnctgcgccggcccaaggatcatgacgttgaaatnc 166
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 165 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 106
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 105 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 62
>gb|AV915127.1|AV915127 AV915127 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9p23 5', mRNA sequence
Length = 582
Score = 422 bits (213), Expect = e-117
Identities = 403/465 (86%), Gaps = 1/465 (0%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactcctt-cgctgtctcaacagcttcagc 281
|||||||| ||||| | |||||| || ||||||||||| |||||| ||||||||||| ||
Sbjct: 538 tgtcatgcaccactggcgtacagacgggtccactcctttcgctgtttcaacagcttctgc 479
Query: 282 ttcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggc 341
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 478 ctcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgc 419
Query: 342 gctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccattt 401
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 418 acttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattt 359
Query: 402 gtccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttt 461
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 358 atccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatatttt 299
Query: 462 tgtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaag 521
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 298 ggtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccag 239
Query: 522 cttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagta 581
||| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| ||
Sbjct: 238 cttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaata 179
Query: 582 ccgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccg 641
|||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || |
Sbjct: 178 ccgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtct 119
Query: 642 ctgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 118 ctgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 74
>gb|BU973650.1|BU973650 HB25J10r BC Hordeum vulgare subsp. vulgare cDNA clone HB25J10
5-PRIME, mRNA sequence
Length = 539
Score = 422 bits (213), Expect = e-117
Identities = 381/437 (87%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||||||||||||||| ||||||||||| || || |||||||||||||| || ||||||
Sbjct: 533 gtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcaatg 474
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| || |||||||| |||||||| ||||| || || | |||||||| || |||| |||
Sbjct: 473 ttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactcaaaaga 414
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || ||||||||||| ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 413 actgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcatatccta 354
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|||||||||||||| || ||||| || ||||| || ||||| ||||| ||||||||||||
Sbjct: 353 ccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggggcagcc 294
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
|| ||||||||||| || || |||||||| ||||| |||||||| ||||| ||||| |||
Sbjct: 293 atcggatattcctcgggtaaaaatagttccagcttaaaaactcccccttcgtagggcgac 234
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||||| |||
Sbjct: 233 tgcgccggcccaaggatcatgacgttgaaataccgcatgttctcctccgagggcgaagcg 174
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
||||||||||| ||||| |||||||| || | ||||||||||||||||||||| ||||||
Sbjct: 173 ctaatccccggagctggctcgctgaggagtctctgcgtctccttgatgattcgtcgcggg 114
Query: 670 agattgctgttggccat 686
|| ||||||||||||||
Sbjct: 113 aggttgctgttggccat 97
>gb|BE454423.1|BE454423 HVSMEh0094G14f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094G14f, mRNA sequence
Length = 989
Score = 420 bits (212), Expect = e-116
Identities = 401/464 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||| ||| |||||||||| ||
Sbjct: 528 tgtcatgcaccactggcgtacagacgggtccactccttcgttgtttcaacagcttttgcc 469
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 468 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 409
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 408 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 349
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 348 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 289
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 288 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 229
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 228 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 169
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 168 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 109
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 108 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 65
>gb|CV054411.1|CV054411 BNEL10C11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL10C11 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 518
Score = 416 bits (210), Expect = e-115
Identities = 380/437 (86%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||||||||||||||| ||||||||||| || || |||||||||||||| || || |||
Sbjct: 510 gtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcnatg 451
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| || |||||||| |||||||| ||||| || || | |||||||| || |||| |||
Sbjct: 450 ttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactcaaaaga 391
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || ||||||||||| ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 390 actgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcatatccta 331
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|||||||||||||| || ||||| || ||||| || ||||| ||||| ||||||||||||
Sbjct: 330 ccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggggcagcc 271
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
|| ||||||||||| || || |||||||| ||||| ||||| || ||||| ||||| |||
Sbjct: 270 atcggatattcctcgggtaaaaatagttccagcttaaaaacccccccttcgtagggcgac 211
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||||| |||
Sbjct: 210 tgcgccggcccaaggatcatgacgttgaaataccgcatgttctcctccgagggcgaagcg 151
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
||||||||||| ||||| |||||||| |||| ||||||||||||||||||||| ||||||
Sbjct: 150 ctaatccccggagctggctcgctgaggagcctctgcgtctccttgatgattcgtcgcggg 91
Query: 670 agattgctgttggccat 686
|| ||||||||||||||
Sbjct: 90 aggttgctgttggccat 74
>gb|BJ474003.1|BJ474003 BJ474003 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18c24 3', mRNA sequence
Length = 713
Score = 408 bits (206), Expect = e-112
Identities = 386/446 (86%)
Strand = Plus / Plus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 268 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 327
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 328 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 387
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 388 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 447
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 448 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 507
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 508 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 567
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 568 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 627
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 628 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 687
Query: 643 tgcgtctccttgatgattcggcgcgg 668
|||||||||||||||||||| |||||
Sbjct: 688 tgcgtctccttgatgattcgtcgcgg 713
>gb|BQ470907.1|BQ470907 HX04G11r HX Hordeum vulgare subsp. vulgare cDNA clone HX04G11
5-PRIME, mRNA sequence
Length = 636
Score = 406 bits (205), Expect = e-112
Identities = 403/469 (85%), Gaps = 5/469 (1%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 508 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 449
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 448 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 389
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 388 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 329
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 328 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 269
Query: 463 gtgagaaatctaactt-----ttggggcagccattggatattcctcaggcaagaatagtt 517
|| ||||| ||||| | ||||||||||||| ||||||||||| || || |||||||
Sbjct: 268 gtcagaaacctaacctgcgctttggggcagccatcggatattcctcgggtaaaaatagtt 209
Query: 518 caagcttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattga 577
| ||||| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||
Sbjct: 208 ccagcttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttga 149
Query: 578 agtaccgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaa 637
| |||||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |
Sbjct: 148 aataccgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgagga 89
Query: 638 gccgctgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
| | ||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 88 gtctctgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 40
>gb|CV063002.1|CV063002 BNEL85e3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL85e3 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 723
Score = 396 bits (200), Expect = e-109
Identities = 398/464 (85%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || |||||||| |||||||| ||||||||||| ||
Sbjct: 538 tgtcatgcaccactggcgtacagacgggtccactcgttcgctgtttcaacagcttctgcc 479
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 478 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 419
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || ||| |||||||| || ||||||||||| |||||||||||
Sbjct: 418 cttaagagtgcctggatactcgaaagaactgttcgaatctgaagagccggactccattta 359
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| ||||||||| |||| ||||||||||| || ||||| || |||||
Sbjct: 358 tccttgagaatgtcaaggcatatcgtacctagcttgtcaatgttgggatgatatattttg 299
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || ||||||| |||
Sbjct: 298 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaagatagttccagc 239
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| ||||| || ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 238 ttaaaaacccccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 179
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| |
Sbjct: 178 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagcctc 119
Query: 643 tgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 118 tgcgtctccttgatgattcgtcgcgggaggttgctgttggccat 75
>gb|AV920058.1|AV920058 AV920058 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9b20 3', mRNA sequence
Length = 712
Score = 394 bits (199), Expect = e-108
Identities = 376/435 (86%)
Strand = Plus / Plus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 278 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 337
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 338 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 397
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 398 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 457
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 458 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 517
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 518 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 577
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 578 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 637
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 638 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 697
Query: 643 tgcgtctccttgatg 657
|||||||||||||||
Sbjct: 698 tgcgtctccttgatg 712
>gb|BU990501.1|BU990501 HF25D20r HF Hordeum vulgare subsp. vulgare cDNA clone HF25D20
5-PRIME, mRNA sequence
Length = 544
Score = 392 bits (198), Expect = e-108
Identities = 369/426 (86%)
Strand = Plus / Minus
Query: 261 cgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatgttgtctgagag 320
|||||| ||||||||||| || || |||||||||||||| || |||||||| || |||||
Sbjct: 544 cgctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagag 485
Query: 321 aggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtagaactgtacgtat 380
||| |||||||| ||||| || || | |||||||| || |||| |||||||| || ||
Sbjct: 484 agggtcatctggatttggtgcacttaagagtgcctggatactcaaaagaactgttcgaat 425
Query: 381 ctgaagagctggactccatttgtccttaagaatgtcgaggcatatcctaccaagcttgtc 440
||||||||| || |||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 424 ctgaagagccggcctccatttatccttgagaatgtcaaggcatatcctaccaagcttgtc 365
Query: 441 aatattaggatggtaaatttttgtgagaaatctaacttttggggcagccattggatattc 500
||| || ||||| || ||||| || ||||| ||||| |||||||||||||| ||||||||
Sbjct: 364 aatgttgggatgatatattttggtcagaaacctaacctttggggcagccatcggatattc 305
Query: 501 ctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgactgcgcggggcc 560
||| || || |||||||| ||||| |||||||| ||||| ||||| |||||||| || ||
Sbjct: 304 ctcgggtaaaaatagttccagcttaaaaactcccccttcgtagggcgactgcgccggccc 245
Query: 561 aaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcgctaatccccgg 620
|||||||||||| ||||| |||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 244 aaggatcatgacgttgaaataccgcatgttctcctccgagggcgaagcgctaatccccgg 185
Query: 621 tgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcgggagattgctgtt 680
||||| |||||||| || | ||||||||||||||||||||| |||||||| ||||||||
Sbjct: 184 agctggctcgctgaggagtctctgcgtctccttgatgattcgtcgcgggaggttgctgtt 125
Query: 681 ggccat 686
||||||
Sbjct: 124 ggccat 119
>gb|AV920164.1|AV920164 AV920164 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9i14 3', mRNA sequence
Length = 686
Score = 389 bits (196), Expect = e-107
Identities = 373/432 (86%)
Strand = Plus / Plus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 255 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 314
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 315 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 374
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 375 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 434
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 435 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 494
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 495 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 554
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 555 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 614
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgc 642
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |
Sbjct: 615 cgcatgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctc 674
Query: 643 tgcgtctccttg 654
||||||||||||
Sbjct: 675 tgcgtctccttg 686
>gb|BU999885.1|BU999885 HS17C05u HS Hordeum vulgare subsp. vulgare cDNA clone HS17C05
3-PRIME, mRNA sequence
Length = 574
Score = 389 bits (196), Expect = e-107
Identities = 320/360 (88%), Gaps = 1/360 (0%)
Strand = Plus / Plus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 213 tgtcatgcaccactggcgtacatacgagtccattccttcgctgtctcaacagcttcagct 272
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| ||||||||||||||||| || | || |||||||||||||||||||||||||| |||
Sbjct: 273 tcattggatttccagtgttttgcgacattctctgagagaggatcatctgggtttggagcg 332
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 333 ctcagcagtgcctgaatgctcaaaagaacagtgcgtatctgaagagctggactccacttg 392
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatgg-taaatttt 461
||||| || |||||||||||||| ||||||||||||||||| || || ||| || |||||
Sbjct: 393 tccttcaggatgtcgaggcatattctaccaagcttgtcaatgttggggtggntatatttt 452
Query: 462 tgtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaag 521
||| ||||| |||||||| || |||||||| ||||||||||| || ||||| ||||||||
Sbjct: 453 tgtcagaaacctaactttaggagcagccatcggatattcctcgggtaagaaaagttcaag 512
Query: 522 cttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagta 581
|||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||| |||||
Sbjct: 513 cttgaagactccaccttcgtagggcgactgcgcggggccaaggaccatgacattaaagta 572
>gb|AL511263.1|AL511263 AL511263 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07I02u 3',
mRNA sequence
Length = 529
Score = 387 bits (195), Expect = e-106
Identities = 380/439 (86%), Gaps = 2/439 (0%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||||||||||||||| |||||||||| || || |||||||||||||| || ||||||
Sbjct: 475 gtccactccttcgctgtttcaacagcttttgcctcattggatttccagtgcttggcaatg 416
Query: 310 ttgtctgagagaggatcatctggg-tttggggcgctcagaagtgcct-gaatgctcagta 367
|| || |||||||| |||||| || ||||| || || | ||||||| | || |||| |
Sbjct: 415 ttttcagagagagggtcatcttggatttggtgcacttaagagtgccttggatactcaaaa 356
Query: 368 gaactgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatcc 427
||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||||||||||
Sbjct: 355 gaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcatatcc 296
Query: 428 taccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcag 487
|||||||||||||||| || ||||| || ||||| || ||||| ||||| ||||||||||
Sbjct: 295 taccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggggcag 236
Query: 488 ccattggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtg 547
|||| ||||||||||| || || |||||||| ||||| |||||||| ||||| ||||| |
Sbjct: 235 ccatcggatattcctcgggtaaaaatagttccagcttaaaaactcccccttcgtagggcg 176
Query: 548 actgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacg 607
||||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||||| |
Sbjct: 175 actgcgccggcccaaggatcatgacgttgaaataccgcatgttctcctccgagggcgaag 116
Query: 608 cgctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcg 667
||||||||||||| ||||| |||||||| || | ||||||||||||||||||||| ||||
Sbjct: 115 cgctaatccccggagctggctcgctgaggagtctctgcgtctccttgatgattcgtcgcg 56
Query: 668 ggagattgctgttggccat 686
|||| ||||||||||||||
Sbjct: 55 ggaggttgctgttggccat 37
>gb|CA001551.1|CA001551 HS17G11u HS Hordeum vulgare subsp. vulgare cDNA clone HS17G11
3-PRIME, mRNA sequence
Length = 571
Score = 387 bits (195), Expect = e-106
Identities = 319/359 (88%), Gaps = 1/359 (0%)
Strand = Plus / Plus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 213 tgtcatgcaccactggcgtacatacgagtccattccttcgctgtctcaacagcttcagct 272
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| ||||||||||||||||| || | || |||||||||||||||||||||||||| |||
Sbjct: 273 tcattggatttccagtgttttgcgacattctctgagagaggatcatctgggtttggagcg 332
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 333 ctcagcagtgcctgaatgctcaaaagaacagtgcgtatctgaagagctggactccacttg 392
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatgg-taaatttt 461
||||| || |||||||||||||| ||||||||||||||||| || || ||| || |||||
Sbjct: 393 tccttcaggatgtcgaggcatattctaccaagcttgtcaatgttggggtggntatatttt 452
Query: 462 tgtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaag 521
||| ||||| |||||||| || |||||||| ||||||||||| || ||||| ||||||||
Sbjct: 453 tgtcagaaacctaactttaggagcagccatcggatattcctcgggtaagaaaagttcaag 512
Query: 522 cttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagt 580
|||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||
Sbjct: 513 cttgaagactccaccttcgtagggcgactgcgcggggccaaggaccatgacattaaagt 571
>gb|BQ765353.1|BQ765353 EBro03_SQ006_N19_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_N19 5', mRNA sequence
Length = 478
Score = 383 bits (193), Expect = e-105
Identities = 349/401 (87%)
Strand = Plus / Minus
Query: 286 ttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctc 345
|||||||||||||| || |||||||| || |||||||| |||||||| ||||| || ||
Sbjct: 476 ttggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcactt 417
Query: 346 agaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtcc 405
| |||||||| || |||| |||||||| || ||||||||||| ||||||||||| |||
Sbjct: 416 aagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccatttatcc 357
Query: 406 ttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtg 465
|| |||||||| |||||||||||||||||||||||||| || ||||| || ||||| ||
Sbjct: 356 ttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttggtc 297
Query: 466 agaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttg 525
||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||||
Sbjct: 296 agaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagctta 237
Query: 526 aaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgc 585
|||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| ||||||
Sbjct: 236 aaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaataccgc 177
Query: 586 atattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgc 645
|| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || | ||||
Sbjct: 176 atgttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctctgc 117
Query: 646 gtctccttgatgattcggcgcgggagattgctgttggccat 686
||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 116 gtctccttgatgattcgtcgcgggaggttgctgttggccat 76
>gb|AL508009.1|AL508009 AL508009 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07I02V 5',
mRNA sequence
Length = 700
Score = 375 bits (189), Expect = e-102
Identities = 356/412 (86%)
Strand = Plus / Plus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 284 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 343
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 344 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 403
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 404 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 463
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 464 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 523
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 524 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 583
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 584 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 643
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctga 634
||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||
Sbjct: 644 cgcatgttctcctccganggcgaagcgctaatccccggagctggctcgctga 695
>gb|BJ474724.1|BJ474724 BJ474724 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20p06 3', mRNA sequence
Length = 713
Score = 369 bits (186), Expect = e-101
Identities = 356/413 (86%)
Strand = Plus / Plus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 299 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 358
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 359 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 418
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 419 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 478
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 479 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 538
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 539 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 598
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 599 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 658
Query: 583 cgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgag 635
||||| ||||||| ||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 659 cgcatgttctcctncgagggcgaagcgctaatccccggagctggctcgctgag 711
>gb|BJ471447.1|BJ471447 BJ471447 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18h12 5', mRNA sequence
Length = 426
Score = 347 bits (175), Expect = 3e-094
Identities = 297/338 (87%)
Strand = Plus / Minus
Query: 349 agtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtcctta 408
|||||||| || |||| |||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 403 agtgcctggatactcaaaagaactgttcgaatctgaagagccggactccatttatccttn 344
Query: 409 agaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgaga 468
|||||||| |||||||||||||||||||||||||| || ||||| || ||||| || |||
Sbjct: 343 agaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttggtcaga 284
Query: 469 aatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaa 528
|| ||||| |||||||||||||| ||||||||||| || || |||||||| ||||| |||
Sbjct: 283 aacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagcttaaaa 224
Query: 529 actccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcata 588
||||| ||||| ||||| |||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 223 actcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaataccgcatg 164
Query: 589 ttctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtc 648
||||||||||| ||||| |||||||||||||| ||||| |||||||| || | |||||||
Sbjct: 163 ttctcctccgagggcgaagcgctaatccccggagctggctcgctgaggagtctctgcgtc 104
Query: 649 tccttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||||| |||||||| ||||||||||||||
Sbjct: 103 tccttgatgattcgtcgcgggaggttgctgttggccat 66
>gb|CA026296.1|CA026296 HZ55I02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55I02
5-PRIME, mRNA sequence
Length = 424
Score = 339 bits (171), Expect = 8e-092
Identities = 252/279 (90%)
Strand = Plus / Minus
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|||||||||||||| ||||||||||||||||| || || ||||| |||||||| |||||
Sbjct: 422 atgtcgaggcatattctaccaagcttgtcaatgttggggtggtatatttttgtcagaaac 363
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
|||||||| || |||||||| ||||||||||| || ||||| |||||||||||||| |||
Sbjct: 362 ctaactttaggagcagccatcggatattcctcgggtaagaaaagttcaagcttgaagact 303
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|||||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||| |||
Sbjct: 302 ccaccttcgtagggcgactgcgcggggccaaggaccatgacattgaagtagcgcatgttc 243
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| |||||||| ||||| |||||||| ||||| |||||||| |||||||||||||||
Sbjct: 242 tcctcggacggcgaggcgctgatccccggcgctggctcgctgagcagccgctgcgtctcc 183
Query: 652 ttgatgattcggcgcgggagattgctgttggccatggaa 690
|||||||| ||||||||||| ||||||||||||||||||
Sbjct: 182 ttgatgatccggcgcgggaggttgctgttggccatggaa 144
>gb|BJ453527.1|BJ453527 BJ453527 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak43g19 5', mRNA sequence
Length = 533
Score = 333 bits (168), Expect = 5e-090
Identities = 324/376 (86%)
Strand = Plus / Minus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 377 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 318
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 317 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 258
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 257 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 198
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 197 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 138
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 137 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 78
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 77 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 18
Query: 583 cgcatattctcctccg 598
||||| ||||||||||
Sbjct: 17 cgcatgttctcctccg 2
>gb|BJ474040.1|BJ474040 BJ474040 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18h12 3', mRNA sequence
Length = 652
Score = 329 bits (166), Expect = 7e-089
Identities = 322/374 (86%)
Strand = Plus / Plus
Query: 223 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 282
|||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 279 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 338
Query: 283 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 342
|| |||||||||||||| || |||||||| || |||||||| |||||||| ||||| ||
Sbjct: 339 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 398
Query: 343 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 402
|| | |||||||| || |||| |||||||| || ||||||||||| |||||||||||
Sbjct: 399 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 458
Query: 403 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 462
||||| |||||||| |||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 459 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 518
Query: 463 gtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaagc 522
|| ||||| ||||| |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 519 gtcagaaacctaacctttggggcagccatcggatattcctcgggtaaaaatagttccagc 578
Query: 523 ttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtac 582
|| |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| |||
Sbjct: 579 ttaaaaactcccccttcgtagggcgactgcgccggcccaaggatcatgacgttgaaatac 638
Query: 583 cgcatattctcctc 596
||||| ||||||||
Sbjct: 639 cgcatgttctcctc 652
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 64,903
Number of Sequences: 312970
Number of extensions: 64903
Number of successful extensions: 21241
Number of sequences better than 0.5: 231
Number of HSP's better than 0.5 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20974
Number of HSP's gapped (non-prelim): 257
length of query: 730
length of database: 175,134,539
effective HSP length: 19
effective length of query: 711
effective length of database: 169,188,109
effective search space: 120292745499
effective search space used: 120292745499
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)