BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2647391.2.1
(1118 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedl... 355 2e-096
gb|BF267688.2|BF267688 HV_CEa0018J20f Hordeum vulgare seedl... 311 3e-083
gb|BF263502.3|BF263502 HV_CEa0006O15f Hordeum vulgare seedl... 297 4e-079
gb|BF624576.2|BF624576 HVSMEa0017C18f Hordeum vulgare seedl... 262 2e-068
gb|BF623533.3|BF623533 HVSMEa0002J15f Hordeum vulgare seedl... 262 2e-068
gb|BF628237.2|BF628237 HVSMEb0003H24f Hordeum vulgare seedl... 262 2e-068
gb|BI946932.1|BI946932 HVSMEl0002N24f Hordeum vulgare spike... 262 2e-068
gb|BE214034.1|BE214034 HV_CEb0001P12f Hordeum vulgare seedl... 262 2e-068
gb|BE215069.1|BE215069 HV_CEb0005L08f Hordeum vulgare seedl... 262 2e-068
gb|BE215347.2|BE215347 HV_CEb0006I19f Hordeum vulgare seedl... 262 2e-068
gb|BF630948.3|BF630948 HVSMEb0014I05f Hordeum vulgare seedl... 262 2e-068
gb|BQ740072.1|BQ740072 HC04F04 HC Hordeum vulgare subsp. vu... 262 2e-068
gb|BI947729.1|BI947729 HVSMEl0006K08f Hordeum vulgare spike... 256 1e-066
gb|BE216829.1|BE216829 HV_CEb0011L16f Hordeum vulgare seedl... 254 5e-066
gb|BF625840.2|BF625840 HVSMEa0013N01f Hordeum vulgare seedl... 248 3e-064
gb|BF258960.3|BF258960 HVSMEf0017C18f Hordeum vulgare seedl... 238 3e-061
gb|BI948891.1|BI948891 HVSMEl0011E18f Hordeum vulgare spike... 232 2e-059
gb|BF267321.1|BF267321 HV_CEa0017J04f Hordeum vulgare seedl... 226 1e-057
gb|BQ766165.1|BQ766165 EBro08_SQ005_P05_R root, 3 week, dro... 226 1e-057
gb|BF253897.2|BF253897 HVSMEf0002G20f Hordeum vulgare seedl... 224 5e-057
gb|BF626467.2|BF626467 HVSMEa0018H19f Hordeum vulgare seedl... 198 3e-049
gb|BG415869.2|BG415869 HVSMEk0008G04f Hordeum vulgare testa... 194 4e-048
gb|BF254690.2|BF254690 HVSMEf0004L23f Hordeum vulgare seedl... 176 1e-042
gb|BE216795.2|BE216795 HV_CEb0011J18f Hordeum vulgare seedl... 172 2e-041
gb|BI954642.1|BI954642 HVSMEm0018P22f Hordeum vulgare green... 168 2e-040
gb|BF254086.3|BF254086 HVSMEf0002P20f Hordeum vulgare seedl... 157 1e-036
gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare s... 92 5e-017
gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. v... 92 5e-017
gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. v... 90 2e-016
gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedl... 76 3e-012
gb|BQ765875.1|BQ765875 EBro03_SQ008_M07_R root, 3 week, wat... 76 3e-012
gb|AV834409.1|AV834409 AV834409 K. Sato unpublished cDNA li... 74 1e-011
gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedl... 74 1e-011
gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedl... 74 1e-011
gb|CA004877.1|CA004877 HS18P04r HS Hordeum vulgare subsp. v... 74 1e-011
gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots... 72 4e-011
gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots... 72 4e-011
gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedl... 72 4e-011
gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedl... 72 4e-011
gb|BE214462.2|BE214462 HV_CEb0003I11f Hordeum vulgare seedl... 72 4e-011
gb|AV833639.1|AV833639 AV833639 K. Sato unpublished cDNA li... 70 2e-010
gb|BE558770.2|BE558770 HV_CEb0020E13f Hordeum vulgare seedl... 66 3e-009
gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA li... 62 4e-008
gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. v... 62 4e-008
gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. v... 62 4e-008
gb|BF622350.1|BF622350 HVSMEa0002O12f Hordeum vulgare seedl... 60 2e-007
gb|BF264443.1|BF264443 HV_CEa0009H01f Hordeum vulgare seedl... 60 2e-007
gb|BF265689.1|BF265689 HV_CEa0013B06f Hordeum vulgare seedl... 60 2e-007
gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedl... 58 7e-007
gb|BE215757.1|BE215757 HV_CEb0008G14f Hordeum vulgare seedl... 58 7e-007
gb|BE216520.1|BE216520 HV_CEb0010L11f Hordeum vulgare seedl... 58 7e-007
gb|BF065899.1|BF065899 HV_CEb0014E21f Hordeum vulgare seedl... 58 7e-007
gb|BF065922.1|BF065922 HV_CEb0014F21f Hordeum vulgare seedl... 58 7e-007
gb|BF065944.1|BF065944 HV_CEb0014G19f Hordeum vulgare seedl... 58 7e-007
gb|BF065968.1|BF065968 HV_CEb0014H19f Hordeum vulgare seedl... 58 7e-007
gb|BF266117.2|BF266117 HV_CEa0014D16f Hordeum vulgare seedl... 58 7e-007
gb|BF267384.2|BF267384 HV_CEa0017M06f Hordeum vulgare seedl... 58 7e-007
gb|BE559055.2|BE559055 HV_CEb0022I16f Hordeum vulgare seedl... 58 7e-007
gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA li... 58 7e-007
gb|AV918927.1|AV918927 AV918927 K. Sato unpublished cDNA li... 58 7e-007
gb|AV922724.1|AV922724 AV922724 K. Sato unpublished cDNA li... 58 7e-007
gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hy... 58 7e-007
gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. v... 58 7e-007
gb|CA012122.1|CA012122 HT04I07r HT Hordeum vulgare subsp. v... 58 7e-007
gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. v... 58 7e-007
gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA li... 58 7e-007
gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA li... 58 7e-007
gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots... 56 3e-006
gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedl... 56 3e-006
gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedl... 56 3e-006
gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedl... 56 3e-006
gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedl... 56 3e-006
gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedl... 56 3e-006
gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedl... 56 3e-006
gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedl... 56 3e-006
gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedl... 56 3e-006
gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedl... 56 3e-006
gb|BF622945.3|BF622945 HVSMEa0012E03f Hordeum vulgare seedl... 56 3e-006
gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedl... 56 3e-006
gb|BF624504.3|BF624504 HVSMEa0016N24f Hordeum vulgare seedl... 56 3e-006
gb|BG299804.2|BG299804 HVSMEa0021O04f Hordeum vulgare seedl... 56 3e-006
gb|BF261927.2|BF261927 HV_CEa0002J15f Hordeum vulgare seedl... 56 3e-006
gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedl... 56 3e-006
gb|BE214864.3|BE214864 HV_CEb0004O15f Hordeum vulgare seedl... 56 3e-006
gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. v... 56 3e-006
gb|BM442945.2|BM442945 EBro02_SQ001_P16_R root, 3 week, hyd... 56 3e-006
gb|CA006848.1|CA006848 HU05N24r HU Hordeum vulgare subsp. v... 56 3e-006
gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedl... 54 1e-005
gb|BF625649.2|BF625649 HVSMEa0013B21f Hordeum vulgare seedl... 54 1e-005
gb|BF619549.2|BF619549 HVSMEc0004A15f Hordeum vulgare seedl... 54 1e-005
gb|BF619363.2|BF619363 HVSMEc0016M05f Hordeum vulgare seedl... 54 1e-005
gb|BF620788.2|BF620788 HVSMEc0020N16f Hordeum vulgare seedl... 54 1e-005
gb|BI959586.1|BI959586 HVSMEn0020E21f Hordeum vulgare rachi... 54 1e-005
gb|BI960661.1|BI960661 HVSMEn0025K13f Hordeum vulgare rachi... 54 1e-005
gb|BE196145.3|BE196145 HVSMEh0091H19f Hordeum vulgare 5-45 ... 54 1e-005
gb|BE196654.3|BE196654 HVSMEh0092O09f Hordeum vulgare 5-45 ... 54 1e-005
gb|AV932609.1|AV932609 AV932609 K. Sato unpublished cDNA li... 54 1e-005
gb|BJ471554.1|BJ471554 BJ471554 K. Sato unpublished cDNA li... 54 1e-005
gb|BQ460114.1|BQ460114 HA07C20r HA Hordeum vulgare subsp. v... 54 1e-005
gb|BQ467510.1|BQ467510 HS04A05r HS Hordeum vulgare subsp. v... 54 1e-005
gb|BQ467646.1|BQ467646 HS04G23r HS Hordeum vulgare subsp. v... 54 1e-005
gb|BM369749.2|BM369749 EBem07_SQ004_H24_R embryo, 28 DPA, n... 54 1e-005
gb|BI776549.2|BI776549 EBpi05_SQ001_N14_R pistil, 8 DPA, no... 54 1e-005
gb|BQ765092.1|BQ765092 EBca01_SQ005_D19_R carpel, pre-anthe... 54 1e-005
gb|BU998635.1|BU998635 HI11L03r HI Hordeum vulgare subsp. v... 54 1e-005
gb|CA001613.1|CA001613 HS05B06r HS Hordeum vulgare subsp. v... 54 1e-005
gb|CA001781.1|CA001781 HS05J03r HS Hordeum vulgare subsp. v... 54 1e-005
gb|CA012182.1|CA012182 HT04L19r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA023217.1|CA023217 HZ45J07r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CA024893.1|CA024893 HZ50K02r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CA025920.1|CA025920 HZ53I14r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CA027026.1|CA027026 HZ57K21r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CA027925.1|CA027925 HZ60H09r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CA028145.1|CA028145 HZ61C04r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CA028873.1|CA028873 HZ63H22r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CA029001.1|CA029001 HZ63O10r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CA029484.1|CA029484 HZ65F17r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CK122333.1|CK122333 BES1824102o06 BES1824 Hordeum vulgar... 54 1e-005
gb|AF109194.1|AF109194 Hordeum vulgare glutathione-S-transf... 54 1e-005
gb|BF623987.2|BF623987 HVSMEa0008F14f Hordeum vulgare seedl... 52 4e-005
gb|BF623248.2|BF623248 HVSMEa0016A09f Hordeum vulgare seedl... 52 4e-005
gb|BF255868.2|BF255868 HVSMEf0008A20f Hordeum vulgare seedl... 52 4e-005
gb|BI953615.1|BI953615 HVSMEm0013J07f Hordeum vulgare green... 52 4e-005
gb|BI954235.1|BI954235 HVSMEm0016M03f Hordeum vulgare green... 52 4e-005
gb|BI954877.1|BI954877 HVSMEm0020D03f Hordeum vulgare green... 52 4e-005
gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedl... 52 4e-005
gb|BF267015.2|BF267015 HV_CEa0016L05f Hordeum vulgare seedl... 52 4e-005
gb|BF268066.2|BF268066 HV_CEa0019M05f Hordeum vulgare seedl... 52 4e-005
gb|BG299767.1|BG299767 HVSMEa0021L16f Hordeum vulgare seedl... 50 2e-004
gb|BF065573.1|BF065573 HV_CEb0012M23f Hordeum vulgare seedl... 50 2e-004
gb|CA003236.1|CA003236 HS09N04r HS Hordeum vulgare subsp. v... 50 2e-004
gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots... 48 6e-004
gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots... 48 6e-004
gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedl... 48 6e-004
gb|BF622486.2|BF622486 HVSMEa0004I15f Hordeum vulgare seedl... 48 6e-004
gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedl... 48 6e-004
gb|BF624808.3|BF624808 HVSMEa0017M20f Hordeum vulgare seedl... 48 6e-004
gb|BF257083.2|BF257083 HVSMEf0011M23f Hordeum vulgare seedl... 48 6e-004
gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedl... 48 6e-004
gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedl... 48 6e-004
gb|BI947723.1|BI947723 HVSMEl0006J20f Hordeum vulgare spike... 48 6e-004
gb|BI949438.1|BI949438 HVSMEl0013O11f Hordeum vulgare spike... 48 6e-004
gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 ... 48 6e-004
gb|BQ471258.1|BQ471258 HV01N17T HV Hordeum vulgare subsp. v... 48 6e-004
gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, n... 48 6e-004
gb|CA000134.1|CA000134 HS09N04u HS Hordeum vulgare subsp. v... 48 6e-004
gb|CA003018.1|CA003018 HS09C19r HS Hordeum vulgare subsp. v... 48 6e-004
gb|BF625851.2|BF625851 HVSMEa0013N14f Hordeum vulgare seedl... 46 0.002
gb|BF258539.2|BF258539 HVSMEf0016A04f Hordeum vulgare seedl... 46 0.002
gb|BF065184.1|BF065184 HV_CEb0023O18f Hordeum vulgare seedl... 46 0.002
gb|BQ135331.1|BQ135331 LP10043 Lemma/palea-enriched cDNA li... 46 0.002
gb|BM442923.2|BM442923 EBro02_SQ001_N17_R root, 3 week, hyd... 46 0.002
gb|BF622044.2|BF622044 HVSMEa0001J20f Hordeum vulgare seedl... 44 0.010
gb|BF623386.2|BF623386 HVSMEa0016I09f Hordeum vulgare seedl... 44 0.010
gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedl... 44 0.010
gb|BG299996.1|BG299996 HVSMEa0022O20f Hordeum vulgare seedl... 44 0.010
gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedl... 44 0.010
gb|BF254945.2|BF254945 HVSMEf0005H21f Hordeum vulgare seedl... 44 0.010
gb|BF256380.2|BF256380 HVSMEf0009H03f Hordeum vulgare seedl... 44 0.010
gb|BF257698.2|BF257698 HVSMEf0013K02f Hordeum vulgare seedl... 44 0.010
gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedl... 44 0.010
gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DA... 44 0.010
gb|BI950533.1|BI950533 HVSMEl0021D14f Hordeum vulgare spike... 44 0.010
gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedl... 44 0.010
gb|AV924070.1|AV924070 AV924070 K. Sato unpublished cDNA li... 44 0.010
gb|BM816911.1|BM816911 HB106C10_SK.ab1 HB Hordeum vulgare s... 44 0.010
gb|BQ466028.1|BQ466028 HT01F24T HT Hordeum vulgare subsp. v... 44 0.010
gb|BQ466201.1|BQ466201 HT01N24T HT Hordeum vulgare subsp. v... 44 0.010
gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, n... 44 0.010
gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. v... 44 0.010
gb|CA025935.1|CA025935 HZ53J07r HZ Hordeum vulgare subsp. v... 44 0.010
gb|BF255189.1|BF255189 HVSMEf0006D04f Hordeum vulgare seedl... 42 0.039
gb|BF065604.1|BF065604 HV_CEb0012O15f Hordeum vulgare seedl... 42 0.039
gb|BQ465287.1|BQ465287 HU03D01r HU Hordeum vulgare subsp. v... 42 0.039
gb|BQ664112.1|BQ664112 HV01N17w HV Hordeum vulgare subsp. v... 42 0.039
gb|CA004703.1|CA004703 HS18G22r HS Hordeum vulgare subsp. v... 42 0.039
gb|CA007742.1|CA007742 HU08O02r HU Hordeum vulgare subsp. v... 42 0.039
gb|CA011833.1|CA011833 HT03K21r HT Hordeum vulgare subsp. v... 42 0.039
gb|CA012539.1|CA012539 HT05L11r HT Hordeum vulgare subsp. v... 42 0.039
gb|CA017465.1|CA017465 HV05E15r HV Hordeum vulgare subsp. v... 42 0.039
gb|CA017476.1|CA017476 HV05F04r HV Hordeum vulgare subsp. v... 42 0.039
gb|CA019652.1|CA019652 HV12K19r HV Hordeum vulgare subsp. v... 42 0.039
gb|CA022879.1|CA022879 HZ44J21r HZ Hordeum vulgare subsp. v... 42 0.039
gb|CA025903.1|CA025903 HZ53H14r HZ Hordeum vulgare subsp. v... 42 0.039
gb|CK125646.1|CK125646 BES1824109j16 BES1824 Hordeum vulgar... 42 0.039
gb|BF622292.2|BF622292 HVSMEa0002I21f Hordeum vulgare seedl... 40 0.15
gb|BF623684.2|BF623684 HVSMEa0003M02f Hordeum vulgare seedl... 40 0.15
gb|BF625356.2|BF625356 HVSMEa0008J19f Hordeum vulgare seedl... 40 0.15
gb|BI948106.1|BI948106 HVSMEl0008D16f Hordeum vulgare spike... 40 0.15
gb|BI948705.1|BI948705 HVSMEl0010J03f Hordeum vulgare spike... 40 0.15
gb|BI949974.1|BI949974 HVSMEl0017G12f Hordeum vulgare spike... 40 0.15
gb|BF256426.3|BF256426 HVSMEf0009J14f Hordeum vulgare seedl... 40 0.15
gb|BF064967.3|BF064967 HV_CEb0022D11f Hordeum vulgare seedl... 40 0.15
gb|BM816595.1|BM816595 HB107A12_SK.ab1 HB Hordeum vulgare s... 40 0.15
gb|BQ459661.1|BQ459661 HA08G22r HA Hordeum vulgare subsp. v... 40 0.15
gb|BQ460149.1|BQ460149 HA07B13r HA Hordeum vulgare subsp. v... 40 0.15
gb|BQ464763.1|BQ464763 HU01G03T HU Hordeum vulgare subsp. v... 40 0.15
gb|BQ466342.1|BQ466342 HT02E05r HT Hordeum vulgare subsp. v... 40 0.15
gb|BQ466475.1|BQ466475 HT02K07r HT Hordeum vulgare subsp. v... 40 0.15
gb|BQ466550.1|BQ466550 HT02N19r HT Hordeum vulgare subsp. v... 40 0.15
gb|BQ663209.1|BQ663209 HU01G03w HU Hordeum vulgare subsp. v... 40 0.15
gb|BQ665881.1|BQ665881 HZ01H04u HZ Hordeum vulgare subsp. v... 40 0.15
gb|BM440902.2|BM440902 EBca01_SQ001_M14_R carpel, pre-anthe... 40 0.15
gb|BQ763941.1|BQ763941 EBro03_SQ005_H19_R root, 3 week, wat... 40 0.15
gb|BQ767689.1|BQ767689 EBro08_SQ009_H13_R root, 3 week, dro... 40 0.15
gb|CA004080.1|CA004080 HS16H17r HS Hordeum vulgare subsp. v... 40 0.15
gb|CA004785.1|CA004785 HS18K23r HS Hordeum vulgare subsp. v... 40 0.15
gb|CA013624.1|CA013624 HT09A14r HT Hordeum vulgare subsp. v... 40 0.15
gb|CA014093.1|CA014093 HT10F20r HT Hordeum vulgare subsp. v... 40 0.15
gb|CA014188.1|CA014188 HT10K07r HT Hordeum vulgare subsp. v... 40 0.15
gb|CA014271.1|CA014271 HT10O05r HT Hordeum vulgare subsp. v... 40 0.15
gb|CA014392.1|CA014392 HT11D14r HT Hordeum vulgare subsp. v... 40 0.15
gb|CA015258.1|CA015258 HT13M04r HT Hordeum vulgare subsp. v... 40 0.15
gb|CA015289.1|CA015289 HT13N17r HT Hordeum vulgare subsp. v... 40 0.15
gb|CA015381.1|CA015381 HT14C07r HT Hordeum vulgare subsp. v... 40 0.15
gb|CA015590.1|CA015590 HT14M12r HT Hordeum vulgare subsp. v... 40 0.15
gb|CA018052.1|CA018052 HV07E12r HV Hordeum vulgare subsp. v... 40 0.15
gb|CA018171.1|CA018171 HV07M12r HV Hordeum vulgare subsp. v... 40 0.15
gb|CA022043.1|CA022043 HZ41P24r HZ Hordeum vulgare subsp. v... 40 0.15
gb|CA027668.1|CA027668 HZ59K12r HZ Hordeum vulgare subsp. v... 40 0.15
gb|CV054570.1|CV054570 BNEL110h7 Barley EST endosperm libra... 40 0.15
gb|CV054644.1|CV054644 BNEL111g12 Barley EST endosperm libr... 40 0.15
gb|CV056861.1|CV056861 BNEL21d3 Barley EST endosperm librar... 40 0.15
gb|CV058068.1|CV058068 BNEL34a12 Barley EST endosperm libra... 40 0.15
gb|CV058333.1|CV058333 BNEL36h8 Barley EST endosperm librar... 40 0.15
gb|CV061630.1|CV061630 BNEL70b2 Barley EST endosperm librar... 40 0.15
>gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003F04f, mRNA sequence
Length = 575
Score = 355 bits (179), Expect = 2e-096
Identities = 369/433 (85%)
Strand = Plus / Minus
Query: 180 cgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctcctggggtccaacc 239
|||||||||||||||||||| |||| ||| |||||||||||||||| |||| |||||||
Sbjct: 447 cgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctcttgggctccaacc 388
Query: 240 cggtgcacaagagcgtgccggtgctcctccacgccggccgcgccataaacgagtcccagg 299
|||||||| ||||||||||||| |||||||||| ||||||| || | |||||||||||||
Sbjct: 387 cggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtgaacgagtcccagg 328
Query: 300 tcatcctgcagtacatcgacgaggtgtgggcggggacggggccggacgtgctgccggccg 359
||||| ||||||||||||||||||| ||||||||| || ||| ||||| |||||||
Sbjct: 327 tcatcgtgcagtacatcgacgaggtctgggcgggggtcggcccgtcggtgctcccggccg 268
Query: 360 acccctacgagcgcgcggtggcgcggttctggggcgcgtacatcgacgacaaggtggagt 419
|||||||||||||||| |||||||| ||||||| |||||| ||||||||||||| | ||
Sbjct: 267 acccctacgagcgcgccgtggcgcgcttctgggcggcgtacgtcgacgacaaggtcgggt 208
Query: 420 cggcgtggctggggatgctgttcaggtgcgcgaacgaggaggagagggcggcggcggtgg 479
|||||||| ||||||||| ||| |||| || ||||||||||||||| | | |||
Sbjct: 207 cggcgtggacggggatgctcttctcgtgcaagacgnaggaggagagggcggagnccgtgt 148
Query: 480 cgcgcgcccgcgaggcgctcgacgcgctggagggcgcgttccgggactgctccaggggga 539
| |||||| | |||||| || | |||||||||||| || ||| |||||| ||||||
Sbjct: 147 cccgcgccgtggcggcgctggagaccctggagggcgcgctcgcggagtgctccgggggga 88
Query: 540 ggccattcttcggcggcgacgacatcgggttcgtggacgccgtgctcggcgggtacctcg 599
||| |||||||||||||||| |||||||||||| |||| |||||||||||| |||||||
Sbjct: 87 agccgttcttcggcggcgacgccatcgggttcgtcgacgtcgtgctcggcggctacctcg 28
Query: 600 gctggttcggggc 612
| |||||||||||
Sbjct: 27 ggtggttcggggc 15
>gb|BF267688.2|BF267688 HV_CEa0018J20f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018J20f, mRNA sequence
Length = 799
Score = 311 bits (157), Expect = 3e-083
Identities = 337/397 (84%)
Strand = Plus / Plus
Query: 347 gtgctgccggccgacccctacgagcgcgcggtggcgcggttctggggcgcgtacatcgac 406
||||| ||||||||||||||||||||||| |||||||| ||||||| |||||| |||||
Sbjct: 4 gtgctcccggccgacccctacgagcgcgccgtggcgcgcttctgggcggcgtacgtcgac 63
Query: 407 gacaaggtggagtcggcgtggctggggatgctgttcaggtgcgcgaacgaggaggagagg 466
|||||||| | |||||||||| ||||||||| ||| |||| || ||||||||||||
Sbjct: 64 gacaaggtcgggtcggcgtggacggggatgctcttctcgtgcaagacggaggaggagagg 123
Query: 467 gcggcggcggtggcgcgcgcccgcgaggcgctcgacgcgctggagggcgcgttccgggac 526
|||| ||| ||| | |||||| | |||||| || | |||||||||||| || |||
Sbjct: 124 gcggaggccgtgtcccgcgccgtggcggcgctggagaccctggagggcgcgctcgcggag 183
Query: 527 tgctccagggggaggccattcttcggcggcgacgacatcgggttcgtggacgccgtgctc 586
|||||| |||||| ||| |||||||||||||||| |||||||||||| |||| |||||||
Sbjct: 184 tgctccggggggaagccgttcttcggcggcgacgccatcgggttcgtcgacgtcgtgctc 243
Query: 587 ggcgggtacctcggctggttcggggccgtcggcaggatcatcgggagcaggctcatcgac 646
||||| |||||||| ||||||||||| ||| || |||||||||| || ||| ||||||
Sbjct: 244 ggcggctacctcgggtggttcggggcgatcgacaagatcatcgggcgccagctgatcgac 303
Query: 647 ccggcccggacgccgctgctggccgcgtgggaggaccggttccgcgccgccgacgtggcc 706
||||| ||||||||||||||||| ||||||||| ||||||||||| || |||| ||||
Sbjct: 304 ccggcgaggacgccgctgctggccaggtgggaggagcggttccgcgcggcggacgcggcc 363
Query: 707 aagggcgtcgtgcccgacgacctcgacaagatgctcg 743
|||||||||||||| |||||| ||||||||||||||
Sbjct: 364 aagggcgtcgtgccggacgacgccgacaagatgctcg 400
>gb|BF263502.3|BF263502 HV_CEa0006O15f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006O15f, mRNA sequence
Length = 593
Score = 297 bits (150), Expect = 4e-079
Identities = 252/286 (88%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 96 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 155
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 156 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 215
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 216 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 275
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcggggacggggccggac 346
|||||||||||||||||| ||||||||||||||||||| ||||||||| || |||
Sbjct: 276 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggggtcggcccgtcg 335
Query: 347 gtgctgccggccgacccctacgagcgcgcggtggcgcggttctggg 392
||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 336 gtgctcccggccgacccctacgagcgcgccgtggcgcgcttctggg 381
>gb|BF624576.2|BF624576 HVSMEa0017C18f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0017C18f, mRNA sequence
Length = 843
Score = 262 bits (132), Expect = 2e-068
Identities = 204/228 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 77 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 136
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 137 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 196
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 197 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 256
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 257 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 304
>gb|BF623533.3|BF623533 HVSMEa0002J15f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002J15f, mRNA sequence
Length = 947
Score = 262 bits (132), Expect = 2e-068
Identities = 204/228 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 27 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 86
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 87 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 146
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 147 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 206
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 207 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 254
>gb|BF628237.2|BF628237 HVSMEb0003H24f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003H24f, mRNA sequence
Length = 486
Score = 262 bits (132), Expect = 2e-068
Identities = 204/228 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 92 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 151
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 152 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 211
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 212 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 271
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 272 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 319
>gb|BI946932.1|BI946932 HVSMEl0002N24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002N24f, mRNA sequence
Length = 851
Score = 262 bits (132), Expect = 2e-068
Identities = 204/228 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 100 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 159
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 160 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 219
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 220 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 279
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 280 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 327
>gb|BE214034.1|BE214034 HV_CEb0001P12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001P12f, mRNA sequence
Length = 900
Score = 262 bits (132), Expect = 2e-068
Identities = 204/228 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 107 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 166
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 167 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 226
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 227 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 286
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 287 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 334
>gb|BE215069.1|BE215069 HV_CEb0005L08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005L08f, mRNA sequence
Length = 821
Score = 262 bits (132), Expect = 2e-068
Identities = 204/228 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 85 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 144
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 145 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 204
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 205 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 264
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 265 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 312
>gb|BE215347.2|BE215347 HV_CEb0006I19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006I19f, mRNA sequence
Length = 685
Score = 262 bits (132), Expect = 2e-068
Identities = 204/228 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 94 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 153
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 154 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 213
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 214 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 273
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 274 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 321
>gb|BF630948.3|BF630948 HVSMEb0014I05f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0014I05f, mRNA sequence
Length = 748
Score = 262 bits (132), Expect = 2e-068
Identities = 204/228 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 96 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 155
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 156 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 215
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 216 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 275
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 276 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 323
>gb|BQ740072.1|BQ740072 HC04F04 HC Hordeum vulgare subsp. vulgare cDNA clone HC04F04
similar to (AF309376) putative glutathione S-transferase
OsGSTU6 [Oryza sativa subsp. japonica], mRNA sequence
Length = 319
Score = 262 bits (132), Expect = 2e-068
Identities = 204/228 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 91 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 150
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 151 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 210
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 211 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 270
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 271 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 318
>gb|BI947729.1|BI947729 HVSMEl0006K08f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0006K08f, mRNA sequence
Length = 977
Score = 256 bits (129), Expect = 1e-066
Identities = 203/228 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 94 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 153
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 154 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 213
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||| | ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 214 ctgngctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 273
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 274 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 321
>gb|BE216829.1|BE216829 HV_CEb0011L16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011L16f, mRNA sequence
Length = 926
Score = 254 bits (128), Expect = 5e-066
Identities = 203/228 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 89 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 148
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 149 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 208
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 209 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 268
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| |||||||||||||| |||| |||||||||
Sbjct: 269 aacgagtcccaggtcatcgtgcagtacatcgacaaggtctgggcgggg 316
>gb|BF625840.2|BF625840 HVSMEa0013N01f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0013N01f, mRNA sequence
Length = 483
Score = 248 bits (125), Expect = 3e-064
Identities = 233/269 (86%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 97 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 156
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 157 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 216
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| || ||| || |
Sbjct: 217 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggaggacgccccgtg 276
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcggggacggggccggac 346
|||||||||||||||||| ||||||||||||||||||| ||||||||| || ||| |
Sbjct: 277 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggggtcggcccgtag 336
Query: 347 gtgctgccggccgacccctacgagcgcgc 375
| ||| ||||||||||| ||| |||||||
Sbjct: 337 gagctcccggccgacccttacaagcgcgc 365
>gb|BF258960.3|BF258960 HVSMEf0017C18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017C18f, mRNA sequence
Length = 819
Score = 238 bits (120), Expect = 3e-061
Identities = 198/224 (88%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||| ||||||||| |||||||| ||| | |||||||||
Sbjct: 71 ctgaagctgctgggcgtgtggacgaccccgttcgtcatccgggtgcgcgtggtgctcaac 130
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| ||||||||||| |||||||| |||| ||| ||||||||||||||||
Sbjct: 131 ctcaagtcgctgccgtacgagtacatggaggagaacctgggcagcaagagcgcgctcctc 190
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 191 ctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtg 250
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggc 330
|||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 251 aacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggc 294
>gb|BI948891.1|BI948891 HVSMEl0011E18f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0011E18f, mRNA sequence
Length = 794
Score = 232 bits (117), Expect = 2e-059
Identities = 203/229 (88%), Gaps = 2/229 (0%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 86 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 145
Query: 167 ctgaagggcctggcgta-cgagtacgtggaggaggacctcagcaacaagagcgcgctcct 225
|| ||| | ||||| |||||||||||||||| |||| ||| |||||||||||||||
Sbjct: 146 ctcaagtcgc-ggcgtggcgagtacgtggaggagaacctgggcagcaagagcgcgctcct 204
Query: 226 cctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccat 285
|||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| || |
Sbjct: 205 cctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgt 264
Query: 286 aaacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 265 gaacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 313
>gb|BF267321.1|BF267321 HV_CEa0017J04f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0017J04f, mRNA sequence
Length = 537
Score = 226 bits (114), Expect = 1e-057
Identities = 207/238 (86%)
Strand = Plus / Minus
Query: 506 ctggagggcgcgttccgggactgctccagggggaggccattcttcggcggcgacgacatc 565
|||||||||||| || ||| |||||| |||||| ||| |||||||||||||||| ||||
Sbjct: 471 ctggagggcgcgctcgcggagtgctccggggggaagccgttcttcggcggcgacgccatc 412
Query: 566 gggttcgtggacgccgtgctcggcgggtacctcggctggttcggggccgtcggcaggatc 625
|||||||| |||| |||||||||||| |||||||| ||||||||||| ||| || ||||
Sbjct: 411 gggttcgtcgacgtcgtgctcggcggctacctcgggtggttcggggcgatcgacaagatc 352
Query: 626 atcgggagcaggctcatcgacccggcccggacgccgctgctggccgcgtgggaggaccgg 685
|||||| || ||| ||||||||||| ||||||||||||||||| ||||||||| |||
Sbjct: 351 atcgggcgccagctgatcgacccggcgaggacgccgctgctggccaggtgggaggaacgg 292
Query: 686 ttccgcgccgccgacgtggccaagggcgtcgtgcccgacgacctcgacaagatgctcg 743
|||||||| || |||| |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 291 ttccgcgcggcggacgcggccaagggcgtcgtgccggacgacgccgacaagatgctcg 234
>gb|BQ766165.1|BQ766165 EBro08_SQ005_P05_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_P05 5', mRNA sequence
Length = 412
Score = 226 bits (114), Expect = 1e-057
Identities = 207/238 (86%)
Strand = Plus / Plus
Query: 506 ctggagggcgcgttccgggactgctccagggggaggccattcttcggcggcgacgacatc 565
|||||||||||| || ||| |||||| |||||| ||| |||||||||||||||| ||||
Sbjct: 5 ctggagggcgcgctcgcggagtgctccggggggaagccgttcttcggcggcgacgccatc 64
Query: 566 gggttcgtggacgccgtgctcggcgggtacctcggctggttcggggccgtcggcaggatc 625
|||||||| |||| |||||||||||| |||||||| ||||||||||| ||| || ||||
Sbjct: 65 gggttcgtcgacgtcgtgctcggcggctacctcgggtggttcggggcgatcgacaagatc 124
Query: 626 atcgggagcaggctcatcgacccggcccggacgccgctgctggccgcgtgggaggaccgg 685
|||||| || ||| ||||||||||| ||||||||||||||||| ||||||||| |||
Sbjct: 125 atcgggcgccagctgatcgacccggcgaggacgccgctgctggccaggtgggaggagcgg 184
Query: 686 ttccgcgccgccgacgtggccaagggcgtcgtgcccgacgacctcgacaagatgctcg 743
|||||||| || |||| |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 185 ttccgcgcggcggacgcggccaagggcgtcgtgccggacgacgccgacaagatgctcg 242
>gb|BF253897.2|BF253897 HVSMEf0002G20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002G20f, mRNA sequence
Length = 621
Score = 224 bits (113), Expect = 5e-057
Identities = 202/229 (88%), Gaps = 2/229 (0%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 84 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 143
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 144 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 203
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggc-cgcgccat 285
||| | ||||||||||||||| ||||||||||||| |||||||||| |||| ||| || |
Sbjct: 204 ctgagctccaacccggtgcaccagagcgtgccggtcctcctccacggcggcgcgc-ccgt 262
Query: 286 aaacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 263 gaacgagtcccaggtcatcgtgcagtacatctacgaggtctgggcgggg 311
>gb|BF626467.2|BF626467 HVSMEa0018H19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0018H19f, mRNA sequence
Length = 782
Score = 198 bits (100), Expect = 3e-049
Identities = 196/228 (85%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 88 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 147
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| || |||||||||||||||| || |||| ||| |||||||||||||||
Sbjct: 148 cttaagtcggtgccgtacgagtacgtggaagataacctgggcagcaagagcgcgctcctt 207
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||||||||||||||| ||| ||||||||| |||||||||| ||| ||| || |
Sbjct: 208 ctgggctccaacccggtgcaccagatcgtgccggtcctcctccacggcggtcgccccgtg 267
Query: 287 aacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||| ||||| |||||||| |||| |||||||||
Sbjct: 268 aacgagtcccaggtcatcgtgcaggacatcgaccaggtctgggcgggg 315
>gb|BG415869.2|BG415869 HVSMEk0008G04f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0008G04f, mRNA sequence
Length = 667
Score = 194 bits (98), Expect = 4e-048
Identities = 197/230 (85%)
Strand = Plus / Plus
Query: 105 acctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctca 164
||||||| |||| ||||||||||| | ||||||||| |||||||| ||| | |||||||
Sbjct: 89 acctgaacctgctgggcgtgtggacaaccccgttcgtcatccgggtgcgcgtggtgctca 148
Query: 165 acctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcc 224
|||| ||| ||| |||||||| ||||||||||| |||| ||| ||||||||||||||
Sbjct: 149 acctcaagtcgctgccgtacgagcacgtggaggagaacctgggcagcaagagcgcgctcc 208
Query: 225 tcctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgcca 284
||||||| ||||||| ||||||| |||||||||||| |||||||||| |||||| |
Sbjct: 209 tcctgggctccaaccgggtgcaccagagcgtgccggccctcctccacgggggccgccctg 268
Query: 285 taaacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
|||||||||||||||||||| ||| |||||||||||||| |||||||||
Sbjct: 269 taaacgagtcccaggtcatcgcgcactacatcgacgaggtctgggcgggg 318
>gb|BF254690.2|BF254690 HVSMEf0004L23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0004L23f, mRNA sequence
Length = 792
Score = 176 bits (89), Expect = 1e-042
Identities = 158/181 (87%)
Strand = Plus / Plus
Query: 563 atcgggttcgtggacgccgtgctcggcgggtacctcggctggttcggggccgtcggcagg 622
|||||||||| |||| |||||||||||| |||||||| ||||||||||| ||| || |
Sbjct: 1 atcgggttcgccgacgtcgtgctcggcggctacctcgggtggttcggggcgatcgacaag 60
Query: 623 atcatcgggagcaggctcatcgacccggcccggacgccgctgctggccgcgtgggaggac 682
||||||||| || |||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 61 atcatcgggcgccggctgatcgacccggcgaggacgccgctgctggccaggtgggaggag 120
Query: 683 cggttccgcgccgccgacgtggccaagggcgtcgtgcccgacgacctcgacaagatgctc 742
||||||||||| || |||| |||||||||||||||||| |||||| |||||||||||||
Sbjct: 121 cggttccgcgcggcggacgcggccaagggcgtcgtgccggacgacgccgacaagatgctc 180
Query: 743 g 743
|
Sbjct: 181 g 181
>gb|BE216795.2|BE216795 HV_CEb0011J18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011J18f, mRNA sequence
Length = 919
Score = 172 bits (87), Expect = 2e-041
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 77 ctgaagctgctgggcgtgtggacgagcccgttcgtcatccgggtgcgcgtggtgctcaac 136
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 137 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 196
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggt 261
||||| ||||||||||||||| |||||||||||||
Sbjct: 197 ctgggctccaacccggtgcaccagagcgtgccggt 231
>gb|BI954642.1|BI954642 HVSMEm0018P22f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0018P22f, mRNA sequence
Length = 675
Score = 168 bits (85), Expect = 2e-040
Identities = 194/229 (84%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccgggtccgcatcgtgctcaac 166
|||||| |||| |||||||||||||||||||| || |||||||| ||| | |||||||||
Sbjct: 30 ctgaagctgctgggcgtgtggacgagcccgtttgtcatccgggtgcgcgtggtgctcaac 89
Query: 167 ctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctc 226
|| ||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 90 ctcaagtcgctgccgtacgagtacgtggaggagaacctgggcagcaagagcgcgctcctc 149
Query: 227 ctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccata 286
||||| ||| |||||| || |||||||||||| |||||||||| ||||||| || |
Sbjct: 150 ctgggctcctacccggggcggcggagcgtgccggtcctcctccacggcggccgccccgtg 209
Query: 287 aac-gagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
||| | ||||| |||||| |||||||||||||| |||| |||||||||
Sbjct: 210 aacatactcccaagtcatcgtgcagtacatcgactaggtctgggcgggg 258
>gb|BF254086.3|BF254086 HVSMEf0002P20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002P20f, mRNA sequence
Length = 807
Score = 157 bits (79), Expect = 1e-036
Identities = 106/115 (92%)
Strand = Plus / Plus
Query: 220 gctcctcctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccg 279
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||
Sbjct: 1 gctcctcctgggctccaacccggtgcaccagagcgtgccggtcctcctccacggcggccg 60
Query: 280 cgccataaacgagtcccaggtcatcctgcagtacatcgacgaggtgtgggcgggg 334
| || | |||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 61 ccccgtgaacgagtcccaggtcatcgtgcagtacatcgacgaggtctgggcgggg 115
>gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B04_T3.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 897
Score = 91.7 bits (46), Expect = 5e-017
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 182 tacgagtacgtggaggaggacctcagcaacaagagcgcgctcctcctggggtccaacccg 241
||||||||||| |||||||| ||| ||||||||||| ||| |||| | |||||||||
Sbjct: 191 tacgagtacgtcgaggaggagctcgccaacaagagcgacctcttcctccgctccaacccg 250
Query: 242 gtgcacaagagcgtgccggtgctcctccacgccggccgcgccataaacgagtcccaggtc 301
|| ||||||| || || |||||| |||||| |||| |||| |||||||||||||
Sbjct: 251 gtacacaagacggttcccgtgctcatccacgacggcaagcccatctgcgagtcccaggtc 310
Query: 302 atcctgcagtacatcgacgagg 323
||||||||||||||||||||||
Sbjct: 311 atcctgcagtacatcgacgagg 332
Score = 50.1 bits (25), Expect = 2e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 356 gccgacccctacgagcgcgcggtggcgcggttctggggcgcgtacatcgacgacaag 412
||||| |||||||||||||| || ||||| ||||||| ||| ||| |||| ||||||
Sbjct: 365 gccgatccctacgagcgcgccgtcgcgcgcttctgggccgcctacgtcgaagacaag 421
>gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. vulgare cDNA clone HR01D11
5-PRIME, mRNA sequence
Length = 500
Score = 91.7 bits (46), Expect = 5e-017
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 182 tacgagtacgtggaggaggacctcagcaacaagagcgcgctcctcctggggtccaacccg 241
||||||||||| |||||||| ||| ||||||||||| ||| |||| | |||||||||
Sbjct: 168 tacgagtacgtcgaggaggagctcgccaacaagagcgacctcttcctccgctccaacccg 227
Query: 242 gtgcacaagagcgtgccggtgctcctccacgccggccgcgccataaacgagtcccaggtc 301
|| ||||||| || || |||||| |||||| |||| |||| |||||||||||||
Sbjct: 228 gtacacaagacggttcccgtgctcatccacgacggcaagcccatctgcgagtcccaggtc 287
Query: 302 atcctgcagtacatcgacgagg 323
||||||||||||||||||||||
Sbjct: 288 atcctgcagtacatcgacgagg 309
Score = 58.0 bits (29), Expect = 7e-007
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 356 gccgacccctacgagcgcgcggtggcgcggttctggggcgcgtacatcgacgacaag 412
|||||||||||||||||||| || ||||| ||||||| ||| ||| |||| ||||||
Sbjct: 342 gccgacccctacgagcgcgccgtcgcgcgcttctgggccgcctacgtcgaagacaag 398
>gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. vulgare cDNA clone HF22C07
5-PRIME, mRNA sequence
Length = 599
Score = 89.7 bits (45), Expect = 2e-016
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 155 atcgtgctcaacctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaag 214
|||| |||| |||| ||||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 201 atcgcgctccacctcaagggcctgagctacgagtacgtggagcaggacctcgacaacaag 260
Query: 215 agcgcgctcctcctggggtccaacccggtgcacaagagcgtgccggtgctcctccac 271
|||| |||||||| |||||||||||||||||||| ||||| |||||| |||||
Sbjct: 261 agcgacctcctcctcatgtccaacccggtgcacaagaaggtgcccgtgctcatccac 317
>gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016G15f, mRNA sequence
Length = 830
Score = 75.8 bits (38), Expect = 3e-012
Identities = 98/118 (83%)
Strand = Plus / Plus
Query: 160 gctcaacctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgc 219
||||| ||| |||||| | || |||||||||||||| |||||||||| | ||||||||
Sbjct: 102 gctcagcctcaagggcgtcgcctacgagtacgtggaagaggacctcaagagcaagagcga 161
Query: 220 gctcctcctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggc 277
||| ||||| |||||||||| |||| | ||| |||||||||||| |||||| ||||
Sbjct: 162 gctgctcctcaggtccaaccccgtgctccagaaggtgccggtgctcatccacgacggc 219
>gb|BQ765875.1|BQ765875 EBro03_SQ008_M07_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_M07 5', mRNA sequence
Length = 391
Score = 75.8 bits (38), Expect = 3e-012
Identities = 98/118 (83%)
Strand = Plus / Plus
Query: 160 gctcaacctgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgc 219
||||| ||| |||||| | || |||||||||||||| |||||||||| | ||||||||
Sbjct: 98 gctcagcctcaagggcgtcgcctacgagtacgtggaagaggacctcaagagcaagagcga 157
Query: 220 gctcctcctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggc 277
||| ||||| |||||||||| |||| | ||| |||||||||||| |||||| ||||
Sbjct: 158 gctgctcctcaggtccaaccccgtgctccagaaggtgccggtgctcatccacgacggc 215
>gb|AV834409.1|AV834409 AV834409 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags1c11, mRNA sequence
Length = 386
Score = 73.8 bits (37), Expect = 1e-011
Identities = 88/105 (83%)
Strand = Plus / Minus
Query: 504 cgctggagggcgcgttccgggactgctccagggggaggccattcttcggcggcgacgaca 563
||||||| ||| ||||| || ||||||| |||| | ||| |||||||||||||||| ||
Sbjct: 328 cgctggaaggcacgttcgagggctgctccgggggcaagccgttcttcggcggcgacggca 269
Query: 564 tcgggttcgtggacgccgtgctcggcgggtacctcggctggttcg 608
|||||||||| |||| ||||||||| | ||||| || |||||||
Sbjct: 268 tcgggttcgtcgacgttgtgctcggcagctacctggggtggttcg 224
>gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014H14f, mRNA sequence
Length = 857
Score = 73.8 bits (37), Expect = 1e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 211 caagagcgcgctcctcctggggtccaacccggtgcacaagagcgtgccggtgctcctcca 270
||||||| |||||||||| | ||||||||| ||||||||||| |||||||||||| ||||
Sbjct: 116 caagagcccgctcctcctcgcgtccaaccccgtgcacaagagggtgccggtgctcatcca 175
Query: 271 c 271
|
Sbjct: 176 c 176
Score = 40.1 bits (20), Expect = 0.15
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 161 ctcaacctgaagggcctggcgtacgagtacgtggaggagg 200
|||||||| |||||||| | |||| ||||||||||||||
Sbjct: 60 ctcaacctcaagggcctcccctacgcgtacgtggaggagg 99
>gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014K12f, mRNA sequence
Length = 966
Score = 73.8 bits (37), Expect = 1e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 211 caagagcgcgctcctcctggggtccaacccggtgcacaagagcgtgccggtgctcctcca 270
||||||| |||||||||| | ||||||||| ||||||||||| |||||||||||| ||||
Sbjct: 152 caagagcccgctcctcctcgcgtccaaccccgtgcacaagagggtgccggtgctcatcca 211
Query: 271 c 271
|
Sbjct: 212 c 212
Score = 40.1 bits (20), Expect = 0.15
Identities = 71/88 (80%)
Strand = Plus / Plus
Query: 504 cgctggagggcgcgttccgggactgctccagggggaggccattcttcggcggcgacgaca 563
|||||||| | |||||| |||| ||||||| ||||| | ||||||||||| |||
Sbjct: 442 cgctggagcgggcgttcggggagtgctccaaggggaagggcttcttcggcggggacacgg 501
Query: 564 tcgggttcgtggacgccgtgctcggcgg 591
| ||| ||||||||| ||||||||||||
Sbjct: 502 tggggctcgtggacgtcgtgctcggcgg 529
Score = 40.1 bits (20), Expect = 0.15
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 161 ctcaacctgaagggcctggcgtacgagtacgtggaggagg 200
|||||||| |||||||| | |||| ||||||||||||||
Sbjct: 96 ctcaacctcaagggcctcccctacgcgtacgtggaggagg 135
>gb|CA004877.1|CA004877 HS18P04r HS Hordeum vulgare subsp. vulgare cDNA clone HS18P04
5-PRIME, mRNA sequence
Length = 313
Score = 73.8 bits (37), Expect = 1e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 211 caagagcgcgctcctcctggggtccaacccggtgcacaagagcgtgccggtgctcctcca 270
||||||| |||||||||| | ||||||||| ||||||||||| |||||||||||| ||||
Sbjct: 147 caagagcccgctcctcctcgcgtccaaccccgtgcacaagagggtgccggtgctcatcca 206
Query: 271 c 271
|
Sbjct: 207 c 207
Score = 40.1 bits (20), Expect = 0.15
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 161 ctcaacctgaagggcctggcgtacgagtacgtggaggagg 200
|||||||| |||||||| | |||| ||||||||||||||
Sbjct: 92 ctcaacctcaagggcctcccctacgcgtacgtggaggagg 131
>gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06I07V 5', mRNA sequence
Length = 394
Score = 71.9 bits (36), Expect = 4e-011
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 168 tgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctcc 227
||||||||||| |||||| ||||||||||| |||| ||||||||||| ||||||||
Sbjct: 156 tgaagggcctgagctacgaggacgtggaggagaacctgtccaacaagagcgagctcctcc 215
Query: 228 tggggtccaacccggtgcacaaga 251
| ||||||||||||||||||||
Sbjct: 216 tcaagtccaacccggtgcacaaga 239
>gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09J19V 5', mRNA sequence
Length = 500
Score = 71.9 bits (36), Expect = 4e-011
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 168 tgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctcc 227
||||||||||| |||||| ||||||||||| |||| ||||||||||| ||||||||
Sbjct: 178 tgaagggcctgagctacgaggacgtggaggagaacctgtccaacaagagcgagctcctcc 237
Query: 228 tggggtccaacccggtgcacaaga 251
| ||||||||||||||||||||
Sbjct: 238 tcaagtccaacccggtgcacaaga 261
>gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007C21f, mRNA sequence
Length = 694
Score = 71.9 bits (36), Expect = 4e-011
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 168 tgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctcc 227
||||||||||| |||||| ||||||||||| |||| ||||||||||| ||||||||
Sbjct: 163 tgaagggcctgagctacgaggacgtggaggagaacctgtccaacaagagcgagctcctcc 222
Query: 228 tggggtccaacccggtgcacaaga 251
| ||||||||||||||||||||
Sbjct: 223 tcaagtccaacccggtgcacaaga 246
>gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015B01f, mRNA sequence
Length = 720
Score = 71.9 bits (36), Expect = 4e-011
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 168 tgaagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcgcgctcctcc 227
||||||||||| |||||| ||||||||||| |||| ||||||||||| ||||||||
Sbjct: 176 tgaagggcctgagctacgaggacgtggaggagaacctgtccaacaagagcgagctcctcc 235
Query: 228 tggggtccaacccggtgcacaaga 251
| ||||||||||||||||||||
Sbjct: 236 tcaagtccaacccggtgcacaaga 259
>gb|BE214462.2|BE214462 HV_CEb0003I11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003I11f, mRNA sequence
Length = 708
Score = 71.9 bits (36), Expect = 4e-011
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 213 agagcgcgctcctcctggggtccaacccggtgcacaagagcgtgccggtgctcctccacg 272
|||||||||| ||||||| | |||||||||||| ||||||||| || |||||||||
Sbjct: 196 agagcgcgcttgtcctgggctataacccggtgcaccagagcgtgcagggcctcctccact 255
Query: 273 ccggccgcgccataaacgagtcccaggtcatcctgcagtacatc 316
|||||| || | ||||||||||| |||||| |||||||||||
Sbjct: 256 gcggccggcccgtgaacgagtcccatgtcatcttgcagtacatc 299
Score = 58.0 bits (29), Expect = 7e-007
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 107 ctgaaggtgctcggcgtgtggacgagcccgttcgtgatccg 147
|||||| |||| ||||||||||||||||||||||| |||||
Sbjct: 90 ctgaagctgctgggcgtgtggacgagcccgttcgtaatccg 130
>gb|AV833639.1|AV833639 AV833639 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags1c11, mRNA sequence
Length = 215
Score = 69.9 bits (35), Expect = 2e-010
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 182 tacgagtacgtggaggaggacctcagcaacaagagcgcgctcctcctggggtccaacccg 241
||||||||||| ||||| |||||| ||||||| ||| ||||||||||| ||||||||
Sbjct: 117 tacgagtacgtngaggaagacctccacaacaagggcgagctcctcctggcctccaacccc 176
Query: 242 gtgcacaaga 251
||||||||||
Sbjct: 177 gtgcacaaga 186
>gb|BE558770.2|BE558770 HV_CEb0020E13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020E13f, mRNA sequence
Length = 806
Score = 65.9 bits (33), Expect = 3e-009
Identities = 107/131 (81%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 169 gaagggcctggcgtacgagtacgtggaggaggacctca---gcaacaagagcgcgctcct 225
|||||||||| | ||||||||||||||||||||||||| | |||||||| | |||
Sbjct: 132 gaagggcctgccctacgagtacgtggaggaggacctcatcgccggcaagagcgaccgcct 191
Query: 226 cctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccat 285
||| | |||||||| || ||||||| | |||||||||||||||| ||||||| || |
Sbjct: 192 cctccgctccaaccccgtccacaagaagatcccggtgctcctccacgacggccgccccgt 251
Query: 286 aaacgagtccc 296
||||||||||
Sbjct: 252 caacgagtccc 262
Score = 42.1 bits (21), Expect = 0.039
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 545 ttcttcggcggcgacgacatcgggttcgtggacgccg 581
||||||||||||||| | |||||||||| |||||||
Sbjct: 490 ttcttcggcggcgacaagttcgggttcgtcgacgccg 526
>gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l18 5', mRNA sequence
Length = 676
Score = 61.9 bits (31), Expect = 4e-008
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 184 cgagtacgtggaggaggacctcagcaacaagagcgcgctcctcctggggtccaacccggt 243
|||| |||| |||||||||||| ||||||||||| |||||||| | |||||||||||
Sbjct: 174 cgaggacgtcgaggaggacctcgccaacaagagcgaactcctcctcgagtccaacccggc 233
Query: 244 gcacaagagcgtgccggtgctcctcca 270
||| |||| ||||| |||||| ||||
Sbjct: 234 gcagaagaaggtgcccgtgctcatcca 260
Score = 58.0 bits (29), Expect = 7e-007
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 356 gccgacccctacgagcgcgcggtggcgcggttctggggcgcgtacatcgacgacaag 412
|||||||||||||||||||| || || || ||||||| ||| ||| |||||||||||
Sbjct: 346 gccgacccctacgagcgcgccgtcgctcgcttctgggccgcctacgtcgacgacaag 402
Score = 48.1 bits (24), Expect = 6e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 296 caggtcatcctgcagtacatcgacgagg 323
||||||||| ||||||||||||||||||
Sbjct: 286 caggtcatcgtgcagtacatcgacgagg 313
>gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. vulgare cDNA clone HV01D06
5-PRIME, mRNA sequence
Length = 629
Score = 61.9 bits (31), Expect = 4e-008
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 184 cgagtacgtggaggaggacctcagcaacaagagcgcgctcctcctggggtccaacccggt 243
|||| |||| |||||||||||| ||||||||||| |||||||| | |||||||||||
Sbjct: 164 cgaggacgtcgaggaggacctcgccaacaagagcgaactcctcctcgagtccaacccggc 223
Query: 244 gcacaagagcgtgccggtgctcctcca 270
||| |||| ||||| |||||| ||||
Sbjct: 224 gcagaagaaggtgcccgtgctcatcca 250
Score = 58.0 bits (29), Expect = 7e-007
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 356 gccgacccctacgagcgcgcggtggcgcggttctggggcgcgtacatcgacgacaag 412
|||||||||||||||||||| || || || ||||||| ||| ||| |||||||||||
Sbjct: 336 gccgacccctacgagcgcgccgtcgctcgcttctgggccgcctacgtcgacgacaag 392
Score = 48.1 bits (24), Expect = 6e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 296 caggtcatcctgcagtacatcgacgagg 323
||||||||| ||||||||||||||||||
Sbjct: 276 caggtcatcgtgcagtacatcgacgagg 303
>gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. vulgare cDNA clone HV04K06
5-PRIME, mRNA sequence
Length = 414
Score = 61.9 bits (31), Expect = 4e-008
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 184 cgagtacgtggaggaggacctcagcaacaagagcgcgctcctcctggggtccaacccggt 243
|||| |||| |||||||||||| ||||||||||| |||||||| | |||||||||||
Sbjct: 164 cgaggacgtcgaggaggacctcgccaacaagagcgaactcctcctcgagtccaacccggc 223
Query: 244 gcacaagagcgtgccggtgctcctcca 270
||| |||| ||||| |||||| ||||
Sbjct: 224 gcagaagaaggtgcccgtgctcatcca 250
Score = 58.0 bits (29), Expect = 7e-007
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 356 gccgacccctacgagcgcgcggtggcgcggttctggggcgcgtacatcgacgacaag 412
|||||||||||||||||||| || || || ||||||| ||| ||| |||||||||||
Sbjct: 336 gccgacccctacgagcgcgccgtcgctcgcttctgggccgcctacgtcgacgacaag 392
Score = 48.1 bits (24), Expect = 6e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 296 caggtcatcctgcagtacatcgacgagg 323
||||||||| ||||||||||||||||||
Sbjct: 276 caggtcatcgtgcagtacatcgacgagg 303
>gb|BF622350.1|BF622350 HVSMEa0002O12f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002O12f, mRNA sequence
Length = 865
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 182 tacgagtacgtggaggaggacctcagcaacaagagcgcgctcctcctggggtccaacccg 241
||||||||| || |||| |||| ||| ||||||||||||||||||||| || ||||||
Sbjct: 168 tacgagtacatgaaggaaaacctgtgcagcaagagcgcgctcctcctgggctcgaacccg 227
Query: 242 gtgcac 247
||||||
Sbjct: 228 gtgcac 233
>gb|BF264443.1|BF264443 HV_CEa0009H01f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009H01f, mRNA sequence
Length = 869
Score = 60.0 bits (30), Expect = 2e-007
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 169 gaagggcctggcgtacgagtacgtggaggaggacctca 206
|||||||||| | |||||||||||||||||||||||||
Sbjct: 560 gaagggcctgccctacgagtacgtggaggaggacctca 597
Score = 48.1 bits (24), Expect = 6e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 257 ccggtgctcctccacgccggccgcgccataaacgagtccc 296
|||||||||||||||| ||||||| || | ||||||||||
Sbjct: 650 ccggtgctcctccacgacggccgccccgtcaacgagtccc 689
>gb|BF265689.1|BF265689 HV_CEa0013B06f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013B06f, mRNA sequence
Length = 543
Score = 60.0 bits (30), Expect = 2e-007
Identities = 106/131 (80%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 169 gaagggcctggcgtacgagtacgtggaggaggacctcagcaac---aagagcgcgctcct 225
|||||||||| | ||||||||||||||||||||||||| | | ||||||| | |||
Sbjct: 133 gaagggcctgccctacgagtacgtggaggaggacctcatcgccggcaagagcgaccgcct 192
Query: 226 cctggggtccaacccggtgcacaagagcgtgccggtgctcctccacgccggccgcgccat 285
|| | |||||||| || ||||||| | |||||||||||||||| ||||||| || |
Sbjct: 193 nctccgctccaaccccgtccacaagaagatcccggtgctcctccacgacggccgccccgt 252
Query: 286 aaacgagtccc 296
||||||||||
Sbjct: 253 caacgagtccc 263
Score = 42.1 bits (21), Expect = 0.039
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 545 ttcttcggcggcgacgacatcgggttcgtggacgccg 581
||||||||||||||| | |||||||||| |||||||
Sbjct: 491 ttcttcggcggcgacaagttcgggttcgtcgacgccg 527
>gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005F03f, mRNA sequence
Length = 946
Score = 58.0 bits (29), Expect = 7e-007
Identities = 119/149 (79%)
Strand = Plus / Plus
Query: 182 tacgagtacgtggaggaggacctcagcaacaagagcgcgctcctcctggggtccaacccg 241
||||||||| ||||| ||||||| || |||| ||| ||||||||| ||||||||||
Sbjct: 99 tacgagtacatggagcaggacctgttcaccaagggcgagctcctcctcaagtccaacccg 158
Query: 242 gtgcacaagagcgtgccggtgctcctccacgccggccgcgccataaacgagtcccaggtc 301
||||||| || || ||||||||| |||||| |||| |||| |||||| | || |
Sbjct: 159 gtgcacatgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtcgctggcc 218
Query: 302 atcctgcagtacatcgacgaggtgtgggc 330
||| |||||||| |||||||||| |||||
Sbjct: 219 atcgtgcagtacgtcgacgaggtctgggc 247
>gb|BE215757.1|BE215757 HV_CEb0008G14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008G14f, mRNA sequence
Length = 507
Score = 58.0 bits (29), Expect = 7e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 170 aagggcctggcgtacgagtacgtggaggaggacctcagcaacaagagcg 218
|||||| ||| |||||||||| ||||||||||||| || ||||||||||
Sbjct: 90 aagggcgtggagtacgagtacctggaggaggacctgaggaacaagagcg 138
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 191,599
Number of Sequences: 312970
Number of extensions: 191599
Number of successful extensions: 61557
Number of sequences better than 0.5: 226
Number of HSP's better than 0.5 without gapping: 222
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 60764
Number of HSP's gapped (non-prelim): 744
length of query: 1118
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1099
effective length of database: 169,188,109
effective search space: 185937731791
effective search space used: 185937731791
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)