BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2643556.2.1
(1354 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke devel... 355 2e-096
gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. v... 351 4e-095
gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke devel... 349 2e-094
gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa... 349 2e-094
gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthe... 349 2e-094
gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 347 6e-094
gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. v... 341 4e-092
gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DA... 337 6e-091
gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke devel... 335 2e-090
gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. v... 333 9e-090
gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 ... 325 2e-087
gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. v... 315 2e-084
gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. v... 315 2e-084
gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. v... 315 2e-084
gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. v... 315 2e-084
gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke devel... 311 3e-083
gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. v... 309 1e-082
gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke devel... 307 5e-082
gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-a... 307 5e-082
gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 ... 307 5e-082
gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. v... 307 5e-082
gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. v... 307 5e-082
gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. v... 305 2e-081
gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke devel... 301 3e-080
gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. v... 301 3e-080
gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. v... 301 3e-080
gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. v... 301 3e-080
gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. v... 301 3e-080
gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. v... 297 5e-079
gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 285 2e-075
gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow st... 281 3e-074
gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike... 278 5e-073
gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. v... 272 3e-071
gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike... 270 1e-070
gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa... 246 2e-063
gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, n... 244 6e-063
gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. v... 240 1e-061
gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgar... 208 4e-052
gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6... 208 4e-052
gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. v... 204 6e-051
gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. v... 192 2e-047
gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. v... 192 2e-047
gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. v... 192 2e-047
gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. v... 192 2e-047
gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. v... 184 5e-045
gb|BG414778.2|BG414778 HVSMEk0003L01f Hordeum vulgare testa... 180 8e-044
gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa... 176 1e-042
gb|BU978508.1|BU978508 HA13H01r HA Hordeum vulgare subsp. v... 165 5e-039
gb|BU979387.1|BU979387 HA15P22r HA Hordeum vulgare subsp. v... 165 5e-039
gb|BU997161.1|BU997161 HI07B21r HI Hordeum vulgare subsp. v... 165 5e-039
gb|CA022702.1|CA022702 HZ44B21r HZ Hordeum vulgare subsp. v... 165 5e-039
gb|CA023382.1|CA023382 HZ46B02r HZ Hordeum vulgare subsp. v... 165 5e-039
gb|CA024068.1|CA024068 HZ48E09r HZ Hordeum vulgare subsp. v... 165 5e-039
gb|CA024560.1|CA024560 HZ49K11r HZ Hordeum vulgare subsp. v... 165 5e-039
gb|CA027865.1|CA027865 HZ60E08r HZ Hordeum vulgare subsp. v... 165 5e-039
gb|BU981579.1|BU981579 HA24A15r HA Hordeum vulgare subsp. v... 163 2e-038
gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 ... 161 7e-038
gb|AL508733.1|AL508733 AL508733 Hordeum vulgare Barke devel... 153 2e-035
gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa... 153 2e-035
gb|BM096825.2|BM096825 EBma07_SQ001_M14_R maternal, 21 DPA,... 153 2e-035
gb|BM097091.2|BM097091 EBpi07_SQ002_F23_R pistil, 12 DPA, n... 153 2e-035
gb|BU975559.1|BU975559 HB31I14r BC Hordeum vulgare subsp. v... 153 2e-035
gb|BU981382.1|BU981382 HA23H05r HA Hordeum vulgare subsp. v... 153 2e-035
gb|BU994511.1|BU994511 HM07E21r HM Hordeum vulgare subsp. v... 153 2e-035
gb|BU996042.1|BU996042 HM12D17r HM Hordeum vulgare subsp. v... 153 2e-035
gb|BU997970.1|BU997970 HI09J04r HI Hordeum vulgare subsp. v... 153 2e-035
gb|BU999207.1|BU999207 HI13L03r HI Hordeum vulgare subsp. v... 153 2e-035
gb|CA021239.1|CA021239 HZ39I09r HZ Hordeum vulgare subsp. v... 153 2e-035
gb|CA022102.1|CA022102 HZ42C18r HZ Hordeum vulgare subsp. v... 153 2e-035
gb|CA022365.1|CA022365 HZ42O13r HZ Hordeum vulgare subsp. v... 153 2e-035
gb|CA024361.1|CA024361 HZ49B13r HZ Hordeum vulgare subsp. v... 153 2e-035
gb|CA025884.1|CA025884 HZ53G19r HZ Hordeum vulgare subsp. v... 153 2e-035
gb|CK123208.1|CK123208 BES1824102i20 BES1824 Hordeum vulgar... 153 2e-035
gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9... 153 2e-035
emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box ... 153 2e-035
gb|BQ758398.1|BQ758398 EBma05_SQ001_L12_R maternal, 12 DPA,... 149 3e-034
gb|BE193714.2|BE193714 HVSMEh0082E10f Hordeum vulgare 5-45 ... 147 1e-033
gb|BE195618.2|BE195618 HVSMEh0089O24f Hordeum vulgare 5-45 ... 147 1e-033
gb|BG414969.2|BG414969 HVSMEk0004I01f Hordeum vulgare testa... 145 4e-033
gb|CA026363.1|CA026363 HZ55L07r HZ Hordeum vulgare subsp. v... 143 2e-032
gb|BG414398.1|BG414398 HVSMEk0002B05f Hordeum vulgare testa... 141 7e-032
gb|BU995060.1|BU995060 HM09B05r HM Hordeum vulgare subsp. v... 139 3e-031
gb|CA024291.1|CA024291 HZ48O08r HZ Hordeum vulgare subsp. v... 139 3e-031
gb|BF266152.2|BF266152 HV_CEa0014F03f Hordeum vulgare seedl... 137 1e-030
gb|BE194007.3|BE194007 HVSMEh0083F13f Hordeum vulgare 5-45 ... 137 1e-030
gb|BQ660301.1|BQ660301 HI01N16w HI Hordeum vulgare subsp. v... 137 1e-030
gb|BI776503.2|BI776503 EBpi05_SQ001_K07_R pistil, 8 DPA, no... 137 1e-030
gb|CA027204.1|CA027204 HZ58D04r HZ Hordeum vulgare subsp. v... 137 1e-030
gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-a... 135 4e-030
gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. v... 135 4e-030
gb|CA023514.1|CA023514 HZ46H17r HZ Hordeum vulgare subsp. v... 135 4e-030
gb|CA023749.1|CA023749 HZ47E18r HZ Hordeum vulgare subsp. v... 135 4e-030
emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box ... 135 4e-030
gb|BI957577.1|BI957577 HVSMEn0010D09f Hordeum vulgare rachi... 131 7e-029
gb|AV932969.1|AV932969 AV932969 K. Sato unpublished cDNA li... 131 7e-029
gb|BM442073.2|BM442073 EBan01_SQ002_B20_R anther, yellow st... 131 7e-029
gb|BJ547238.1|BJ547238 BJ547238 K. Sato unpublished cDNA li... 131 7e-029
gb|BJ547546.1|BJ547546 BJ547546 K. Sato unpublished cDNA li... 131 7e-029
gb|AV922660.2|AV922660 AV922660 K. Sato unpublished cDNA li... 131 7e-029
emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box ... 131 7e-029
gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 ... 127 1e-027
gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa... 127 1e-027
gb|BI776993.2|BI776993 EBpi03_SQ001_J15_R pistil, 4 DPA, no... 127 1e-027
gb|CA026975.1|CA026975 HZ57I06r HZ Hordeum vulgare subsp. v... 127 1e-027
gb|BJ547237.1|BJ547237 BJ547237 K. Sato unpublished cDNA li... 125 4e-027
gb|BU979939.1|BU979939 HA17O10r HA Hordeum vulgare subsp. v... 123 2e-026
gb|CA031703.1|CA031703 HX10O06r HX Hordeum vulgare subsp. v... 123 2e-026
gb|BF624256.3|BF624256 HVSMEa0013C13f Hordeum vulgare seedl... 119 3e-025
gb|BI958544.1|BI958544 HVSMEn0015I07f Hordeum vulgare rachi... 119 3e-025
gb|BE231150.2|BE231150 HVSMEg0017C04f Hordeum vulgare pre-a... 119 3e-025
gb|BG343946.2|BG343946 HVSMEg0007D05f Hordeum vulgare pre-a... 119 3e-025
gb|BG418254.2|BG418254 HVSMEk0022B16f Hordeum vulgare testa... 119 3e-025
gb|BM374839.1|BM374839 EBma05_SQ003_C14_R maternal, 12 DPA,... 119 3e-025
gb|AV932867.1|AV932867 AV932867 K. Sato unpublished cDNA li... 119 3e-025
gb|AV933011.1|AV933011 AV933011 K. Sato unpublished cDNA li... 119 3e-025
gb|AV934186.1|AV934186 AV934186 K. Sato unpublished cDNA li... 119 3e-025
gb|BQ462520.1|BQ462520 HI01C12T HI Hordeum vulgare subsp. v... 119 3e-025
gb|BQ463844.1|BQ463844 HG01J20r HG Hordeum vulgare subsp. v... 119 3e-025
gb|BM376225.2|BM376225 EBma01_SQ002_L14_R maternal, 4 DPA, ... 119 3e-025
gb|BU994410.1|BU994410 HM06P17r HM Hordeum vulgare subsp. v... 119 3e-025
gb|BU997618.1|BU997618 HI08I05r HI Hordeum vulgare subsp. v... 119 3e-025
gb|BU999147.1|BU999147 HI13G17r HI Hordeum vulgare subsp. v... 119 3e-025
gb|BU999601.1|BU999601 HI15A03r HI Hordeum vulgare subsp. v... 119 3e-025
gb|CA021403.1|CA021403 HZ39P24r HZ Hordeum vulgare subsp. v... 119 3e-025
gb|CA023726.1|CA023726 HZ47D14r HZ Hordeum vulgare subsp. v... 119 3e-025
gb|CA025109.1|CA025109 HZ51D19r HZ Hordeum vulgare subsp. v... 119 3e-025
gb|CA025481.1|CA025481 HZ52E16r HZ Hordeum vulgare subsp. v... 119 3e-025
gb|CA032046.1|CA032046 HX11N16r HX Hordeum vulgare subsp. v... 119 3e-025
gb|BJ547239.1|BJ547239 BJ547239 K. Sato unpublished cDNA li... 119 3e-025
gb|BJ547327.1|BJ547327 BJ547327 K. Sato unpublished cDNA li... 119 3e-025
gb|BJ547335.1|BJ547335 BJ547335 K. Sato unpublished cDNA li... 119 3e-025
gb|BJ547364.1|BJ547364 BJ547364 K. Sato unpublished cDNA li... 119 3e-025
gb|BJ547385.1|BJ547385 BJ547385 K. Sato unpublished cDNA li... 119 3e-025
gb|BJ547578.1|BJ547578 BJ547578 K. Sato unpublished cDNA li... 119 3e-025
gb|BJ547620.1|BJ547620 BJ547620 K. Sato unpublished cDNA li... 119 3e-025
gb|BJ547783.1|BJ547783 BJ547783 K. Sato unpublished cDNA li... 119 3e-025
gb|BJ547898.1|BJ547898 BJ547898 K. Sato unpublished cDNA li... 119 3e-025
gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar More... 119 3e-025
gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri... 119 3e-025
gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triu... 119 3e-025
gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar More... 119 3e-025
gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar More... 119 3e-025
gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar More... 119 3e-025
gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 119 3e-025
gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dick... 119 3e-025
gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harr... 119 3e-025
gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Stri... 119 3e-025
gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Trem... 119 3e-025
gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri... 119 3e-025
gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure... 119 3e-025
gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Komp... 119 3e-025
gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triu... 119 3e-025
gb|BQ470743.1|BQ470743 HX03O10r HX Hordeum vulgare subsp. v... 117 1e-024
gb|BF629182.3|BF629182 HVSMEb0010D12f Hordeum vulgare seedl... 115 4e-024
gb|BE194950.3|BE194950 HVSMEh0087M04f Hordeum vulgare 5-45 ... 115 4e-024
gb|BF264447.3|BF264447 HV_CEa0009H05f Hordeum vulgare seedl... 115 4e-024
gb|BQ459169.1|BQ459169 HA02B21r HA Hordeum vulgare subsp. v... 115 4e-024
gb|BM442365.2|BM442365 EBan01_SQ002_P21_R anther, yellow st... 115 4e-024
gb|BU973061.1|BU973061 HB23K04r BC Hordeum vulgare subsp. v... 115 4e-024
gb|CA009054.1|CA009054 HU13A17r HU Hordeum vulgare subsp. v... 115 4e-024
gb|CA009157.1|CA009157 HU13F11r HU Hordeum vulgare subsp. v... 115 4e-024
gb|BF622888.3|BF622888 HVSMEa0009O05f Hordeum vulgare seedl... 111 6e-023
gb|CA021814.1|CA021814 HZ41D07r HZ Hordeum vulgare subsp. v... 111 6e-023
emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box ... 111 6e-023
gb|BF627401.2|BF627401 HVSMEb0004M05f Hordeum vulgare seedl... 107 1e-021
gb|BI956235.1|BI956235 HVSMEn0001F21f Hordeum vulgare rachi... 107 1e-021
gb|BE194699.3|BE194699 HVSMEh0086I20f Hordeum vulgare 5-45 ... 107 1e-021
gb|BE196209.3|BE196209 HVSMEh0091K15f Hordeum vulgare 5-45 ... 107 1e-021
emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box ... 107 1e-021
gb|BI960528.1|BI960528 HVSMEn0024O19f Hordeum vulgare rachi... 105 4e-021
gb|BM373901.1|BM373901 EBma03_SQ003_B04_R maternal, 8 DPA, ... 105 4e-021
gb|BU996011.1|BU996011 HM12B18r HM Hordeum vulgare subsp. v... 105 4e-021
gb|BG417111.1|BG417111 HVSMEk0016F04f Hordeum vulgare testa... 103 1e-020
gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachi... 100 2e-019
gb|CV056304.1|CV056304 BNEL16C1 Barley EST endosperm librar... 100 2e-019
gb|BI776462.2|BI776462 EBpi05_SQ001_H07_R pistil, 8 DPA, no... 98 9e-019
gb|BI948719.1|BI948719 HVSMEl0010J18f Hordeum vulgare spike... 90 2e-016
gb|BU967322.1|BU967322 HB03O23r BC Hordeum vulgare subsp. v... 88 9e-016
emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box ... 88 9e-016
emb|AJ249142.1|HVU249142 Hordeum vulgare mRNA for MADS-box ... 88 9e-016
gb|BF627446.2|BF627446 HVSMEb0004O03f Hordeum vulgare seedl... 86 4e-015
gb|BG367455.1|BG367455 HVSMEi0012F04f Hordeum vulgare 20 DA... 86 4e-015
gb|BJ543924.1|BJ543924 BJ543924 K. Sato unpublished cDNA li... 82 5e-014
gb|BG301340.1|BG301340 HVSMEb0020P03f Hordeum vulgare seedl... 80 2e-013
gb|BQ764751.1|BQ764751 EBca01_SQ004_E21_R carpel, pre-anthe... 80 2e-013
gb|BU979626.1|BU979626 HA16M02r HA Hordeum vulgare subsp. v... 80 2e-013
gb|BU981513.1|BU981513 HA23N18r HA Hordeum vulgare subsp. v... 80 2e-013
gb|CV060720.1|CV060720 BNEL60d5 Barley EST endosperm librar... 80 2e-013
gb|BQ462769.1|BQ462769 HI01P04T HI Hordeum vulgare subsp. v... 78 9e-013
gb|BU967729.1|BU967729 HB05D14r BC Hordeum vulgare subsp. v... 78 9e-013
gb|BU968939.1|BU968939 HB10A19r BC Hordeum vulgare subsp. v... 78 9e-013
gb|BU975017.1|BU975017 HB29N11r BC Hordeum vulgare subsp. v... 78 9e-013
gb|BU975058.1|BU975058 HB29P11r BC Hordeum vulgare subsp. v... 78 9e-013
gb|CV054127.1|CV054127 BNEL107a5 Barley EST endosperm libra... 78 9e-013
gb|AL510315.1|AL510315 AL510315 Hordeum vulgare Barke devel... 76 3e-012
gb|AL511037.1|AL511037 AL511037 Hordeum vulgare Barke devel... 76 3e-012
gb|BI958127.1|BI958127 HVSMEn0013H24f Hordeum vulgare rachi... 76 3e-012
gb|BQ469990.1|BQ469990 HX01H06T HX Hordeum vulgare subsp. v... 76 3e-012
gb|CV057167.1|CV057167 BNEL24g3 Barley EST endosperm librar... 76 3e-012
gb|CV060514.1|CV060514 BNEL59a11 Barley EST endosperm libra... 76 3e-012
gb|BU996044.1|BU996044 HM12D19r HM Hordeum vulgare subsp. v... 72 5e-011
gb|CV058687.1|CV058687 BNEL3G11 Barley EST endosperm librar... 70 2e-010
gb|AL509916.1|AL509916 AL509916 Hordeum vulgare Barke devel... 68 8e-010
gb|AL510122.1|AL510122 AL510122 Hordeum vulgare Barke devel... 68 8e-010
gb|AL511273.1|AL511273 AL511273 Hordeum vulgare Barke devel... 68 8e-010
gb|BJ452447.1|BJ452447 BJ452447 K. Sato unpublished cDNA li... 68 8e-010
gb|BM096974.2|BM096974 EBpi07_SQ001_P17_R pistil, 12 DPA, n... 68 8e-010
gb|BM097187.2|BM097187 EBpi07_SQ002_K24_R pistil, 12 DPA, n... 68 8e-010
gb|CA028563.1|CA028563 HZ62G22r HZ Hordeum vulgare subsp. v... 68 8e-010
gb|CV061087.1|CV061087 BNEL64g7 Barley EST endosperm librar... 68 8e-010
gb|BU981281.1|BU981281 HA23C12r HA Hordeum vulgare subsp. v... 66 3e-009
gb|BU994760.1|BU994760 HM08C02r HM Hordeum vulgare subsp. v... 66 3e-009
gb|AY541065.1| Hordeum vulgare subsp. vulgare APETALA3-like... 66 3e-009
gb|BG365779.1|BG365779 HVSMEi0004C18f Hordeum vulgare 20 DA... 64 1e-008
gb|BG365393.2|BG365393 HVSMEi0002I08f Hordeum vulgare 20 DA... 64 1e-008
gb|BQ464802.1|BQ464802 HU01I23T HU Hordeum vulgare subsp. v... 64 1e-008
gb|AL512153.1|AL512153 AL512153 Hordeum vulgare Barke devel... 60 2e-007
gb|CA004880.1|CA004880 HS18P07r HS Hordeum vulgare subsp. v... 58 8e-007
gb|CA008106.1|CA008106 HU09O17r HU Hordeum vulgare subsp. v... 58 8e-007
gb|BG415626.2|BG415626 HVSMEk0007D15f Hordeum vulgare testa... 56 3e-006
gb|AY785815.1| Hordeum vulgare subsp. vulgare cultivar More... 54 1e-005
gb|AY785816.1| Hordeum vulgare subsp. vulgare cultivar Harr... 54 1e-005
gb|AY785817.1| Hordeum vulgare subsp. vulgare cultivar Dick... 54 1e-005
gb|AY785818.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 54 1e-005
gb|AY785819.1| Hordeum vulgare subsp. vulgare cultivar Trem... 54 1e-005
gb|AY785821.1| Hordeum vulgare subsp. vulgare cultivar Nure... 54 1e-005
gb|AY785822.1| Hordeum vulgare subsp. vulgare cultivar Igri... 54 1e-005
gb|AY785823.1| Hordeum vulgare subsp. vulgare cultivar Stri... 54 1e-005
gb|AY785824.1| Hordeum vulgare subsp. vulgare cultivar Komp... 54 1e-005
gb|AY866485.1| Hordeum vulgare subsp. vulgare cultivar Triu... 54 1e-005
gb|BG310152.1|BG310152 HVSMEc0016P20f Hordeum vulgare seedl... 50 2e-004
gb|BE455888.2|BE455888 HVSMEg0017B20f Hordeum vulgare pre-a... 50 2e-004
gb|BQ462617.1|BQ462617 HI01H19T HI Hordeum vulgare subsp. v... 50 2e-004
gb|BU998520.1|BU998520 HI11F04r HI Hordeum vulgare subsp. v... 50 2e-004
gb|CA022292.1|CA022292 HZ42L06r HZ Hordeum vulgare subsp. v... 50 2e-004
gb|CA025681.1|CA025681 HZ52N13r HZ Hordeum vulgare subsp. v... 50 2e-004
gb|CA032371.1|CA032371 HX12N03r HX Hordeum vulgare subsp. v... 50 2e-004
gb|CK125530.1|CK125530 BES1824108p02 BES1824 Hordeum vulgar... 50 2e-004
gb|AY541066.1| Hordeum vulgare subsp. vulgare PISTILLATA-li... 50 2e-004
gb|BG343071.2|BG343071 HVSMEg0001P05f Hordeum vulgare pre-a... 46 0.003
gb|BQ758192.1|BQ758192 EBma01_SQ003_M16_R maternal, 4 DPA, ... 46 0.003
gb|BU971194.1|BU971194 HB16O07r BC Hordeum vulgare subsp. v... 46 0.003
gb|BU971499.1|BU971499 HB17M21r BC Hordeum vulgare subsp. v... 46 0.003
gb|CA002368.1|CA002368 HS07E14r HS Hordeum vulgare subsp. v... 44 0.012
gb|BE060404.2|BE060404 HVSMEg0012D12f Hordeum vulgare pre-a... 42 0.047
gb|CA030209.1|CA030209 HX06G11r HX Hordeum vulgare subsp. v... 42 0.047
>gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10J07V 5',
mRNA sequence
Length = 700
Score = 355 bits (179), Expect = 2e-096
Identities = 409/485 (84%), Gaps = 3/485 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 155 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 214
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 215 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 274
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 275 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 334
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 335 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 391
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 392 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 451
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 452 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 511
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtg 683
|| ||||| ||| | ||||||| || |||||||||||||||| |||||| || |
Sbjct: 512 cagctggagggaaggctggacaaaggcctaggaaagattagagcaagaaagaatgaatta 571
Query: 684 ctgtgttctgaagtcgagtacatgcagagaagggaaatggagttgcagaatgacaacttg 743
|| | ||||| | ||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 572 ctaagcgctgaaattgagtacatgcagagaagggaaatggagctgcagaataacaacttc 631
Query: 744 tactt 748
|||||
Sbjct: 632 tactt 636
>gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. vulgare cDNA clone HM13B01
5-PRIME, mRNA sequence
Length = 637
Score = 351 bits (177), Expect = 4e-095
Identities = 404/479 (84%), Gaps = 3/479 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 158 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 217
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 218 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 277
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 278 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 337
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 338 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 394
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 395 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 454
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 455 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 514
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtg 683
|| ||||| ||| | ||||||| || |||||||||||||||| |||||| || |
Sbjct: 515 cagctggagggaaggctggacaaaggcctaggaaagattagagcaagaaagaatgaatta 574
Query: 684 ctgtgttctgaagtcgagtacatgcagagaagggaaatggagttgcagaatgacaactt 742
|| | ||||| | ||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 575 ctaagcgctgaaattgagtacatgcagagaagggaaatggagctgcagaataacaactt 633
>gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04I23T 5',
mRNA sequence
Length = 700
Score = 349 bits (176), Expect = 2e-094
Identities = 410/486 (84%), Gaps = 4/486 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 206 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 265
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 266 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 325
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 326 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 385
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 386 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 442
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 443 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 502
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 503 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 562
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaa-aaaagaacgatgt 682
|| ||||| ||| | ||||||| || |||||||||||||||| ||||||| || |
Sbjct: 563 cagctggagggaaggctggacaaaggcctaggaaagattagagcaagaaaagaatgaatt 622
Query: 683 gctgtgttctgaagtcgagtacatgcagagaagggaaatggagttgcagaatgacaactt 742
|| | ||||| | ||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 623 actaagcgctgaaattgagtacatgcagagaagggaaatggagctgcagaataacaactt 682
Query: 743 gtactt 748
|||||
Sbjct: 683 ctactt 688
>gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002P16f, mRNA sequence
Length = 804
Score = 349 bits (176), Expect = 2e-094
Identities = 408/485 (84%), Gaps = 3/485 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 150 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 209
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 210 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 269
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 270 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 329
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 330 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 386
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 387 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 446
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 447 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 506
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtg 683
||| ||||| ||| | ||||||| || ||||||||||||||| |||||| || |
Sbjct: 507 cacctggagggaaggctggacaaaggcctangaaagattagagcaagaaagaatgaatta 566
Query: 684 ctgtgttctgaagtcgagtacatgcagagaagggaaatggagttgcagaatgacaacttg 743
|| | ||||| | |||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 567 ctaagcgctgaaattgagtacatgcagagaaaggaaatggagctgcagaataacaacttc 626
Query: 744 tactt 748
|||||
Sbjct: 627 tactt 631
>gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_L21 5', mRNA sequence
Length = 719
Score = 349 bits (176), Expect = 2e-094
Identities = 408/485 (84%), Gaps = 3/485 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 132 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 191
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 192 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 251
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 252 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 311
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 312 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 368
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 369 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 428
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 429 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 488
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtg 683
|| ||||| ||| | ||||||| || |||||||||| ||||| |||||| || |
Sbjct: 489 cagctggagggaaggctggacaaaggcctaggaaagattanagcaagaaagaatgaatta 548
Query: 684 ctgtgttctgaagtcgagtacatgcagagaagggaaatggagttgcagaatgacaacttg 743
|| | ||||| | ||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 549 ctaagcgctgaaattgagtacatgcagagaagggaaatggagctgcagaataacaacttc 608
Query: 744 tactt 748
|||||
Sbjct: 609 tactt 613
>gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 2 HvAG2 (AG2)
mRNA, complete cds
Length = 1068
Score = 347 bits (175), Expect = 6e-094
Identities = 408/485 (84%), Gaps = 3/485 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 108 gagatcaagcgcatcgagaacacgacgaaccggcagctcaccttctgcaagcgccgcaac 167
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 168 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 227
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 228 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 287
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 288 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 344
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 345 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 404
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 405 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 464
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtg 683
|| ||||| ||| | ||||||| || |||||||||||||||| |||||| || |
Sbjct: 465 cagctggagggaaggctggacaaaggcctaggaaagattagagcaagaaagaatgaatta 524
Query: 684 ctgtgttctgaagtcgagtacatgcagagaagggaaatggagttgcagaatgacaacttg 743
|| | ||||| | ||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 525 ctaagcgctgaaattgagtacatgcagagaagggaaatggagctgcagaataacaacttc 584
Query: 744 tactt 748
|||||
Sbjct: 585 tactt 589
Score = 67.9 bits (34), Expect = 8e-010
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 863 cttcctgcagttcaacatcgtgcagcagcctcagttctattctcagcaggagga 916
||||||||||||||||||| ||||||||||||||| ||| | |||||||||||
Sbjct: 704 cttcctgcagttcaacatcatgcagcagcctcagtactacacccagcaggagga 757
>gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. vulgare cDNA clone HB31F02
5-PRIME, mRNA sequence
Length = 501
Score = 341 bits (172), Expect = 4e-092
Identities = 402/478 (84%), Gaps = 3/478 (0%)
Strand = Plus / Plus
Query: 271 agcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctcc 330
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 11 agcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaacggactcc 70
Query: 331 tcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttct 390
| |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| |
Sbjct: 71 tgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtcgtctttt 130
Query: 391 ccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccattgagaggt 450
|||||||||| |||||||| |||||| ||||||||||||| |||| ||||||||||| |
Sbjct: 131 ccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccattgagagat 190
Query: 451 acaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtcaccattc 510
||||||||||||| ||||||| ||||||| |||||||| | |||||| ||| |
Sbjct: 191 acaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatcaatgccc 247
Query: 511 agcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcagaactcca 570
|||| ||| ||||||||||||| | ||||||||| ||||| | ||||||||||||||
Sbjct: 248 agcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcagaactcca 307
Query: 571 acagggccctgataggtgattctatcacaaccatgagccacaaggaacttaagcacttgg 630
||||| | || ||||| ||| | || | ||||||||||||| || || ||||| |||
Sbjct: 308 acaggactctaataggcgataccatggctaccatgagccacagagacctaaagcagctgg 367
Query: 631 agactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtgctgtgtt 690
|| ||| | ||||||| || |||||||||||||||| |||||| || | || |
Sbjct: 368 agggaaggctggacaaaggcctaggaaagattagagcaagaaagaatgaattactaagcg 427
Query: 691 ctgaagtcgagtacatgcagagaagggaaatggagttgcagaatgacaacttgtactt 748
||||| | ||||||||||||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 428 ctgaaattgagtacatgcagagaagggaaatggagctgcagaataacaacttctactt 485
>gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011P20f, mRNA sequence
Length = 512
Score = 337 bits (170), Expect = 6e-091
Identities = 396/471 (84%), Gaps = 3/471 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 41 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 100
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 101 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 160
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 161 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 220
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 221 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 277
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 278 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 337
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 338 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 397
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtg 683
|| ||||| ||| | ||||||| || ||||||||||||||| |||||| || |
Sbjct: 398 cagctggagggaaggctggacaaaggcctangaaagattagagcaagaaagaatgaatta 457
Query: 684 ctgtgttctgaagtcgagtacatgcagagaagggaaatggagttgcagaat 734
|| | ||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 458 ctaagcgctgaaattgagtacatgcagagaagggaaatggagctgcagaat 508
>gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E14T 5',
mRNA sequence
Length = 700
Score = 335 bits (169), Expect = 2e-090
Identities = 410/487 (84%), Gaps = 5/487 (1%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 127 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 186
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 187 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 246
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 247 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 306
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 307 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 363
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 364 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 423
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 424 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 483
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtg 683
|| ||||| ||| | ||||||| || |||||||||||||||| |||||| || |
Sbjct: 484 cagctggagggaaggctggacaaaggcctaggaaagattagagcaagaaagaatgaatta 543
Query: 684 ctgtgttctgaagtcgagtacatgcagagaa-gggaaatggag-ttgcagaatgacaact 741
|| | ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct: 544 ctaagcgctgaaattgagtacatgcagagaaggggaaatggagcttgcagaataacaact 603
Query: 742 tgtactt 748
| |||||
Sbjct: 604 tctactt 610
>gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N15
5-PRIME, mRNA sequence
Length = 633
Score = 333 bits (168), Expect = 9e-090
Identities = 389/462 (84%), Gaps = 3/462 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 172 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 231
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 232 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 291
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 292 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 351
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 352 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 408
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 409 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 468
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 469 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 528
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtg 683
|| ||||| ||| | ||||||| || |||||||||||||||| |||||| || |
Sbjct: 529 cagctggagggaaggctggacaaaggcctaggaaagattagagcaagaaagaatgaatta 588
Query: 684 ctgtgttctgaagtcgagtacatgcagagaagggaaatggag 725
|| | ||||| | |||||||||||||||||||||||||||
Sbjct: 589 ctaagcgctgaaattgagtacatgcagagaagggaaatggag 630
>gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095C18f, mRNA sequence
Length = 880
Score = 325 bits (164), Expect = 2e-087
Identities = 388/462 (83%), Gaps = 3/462 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 150 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 209
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 210 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 269
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 270 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 329
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 330 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 386
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 387 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 446
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 447 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 506
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtg 683
|| ||||| ||| | ||||||| || |||||||||||||||| |||||| || |
Sbjct: 507 cagctggagggaaggctggacaaaggcctaggaaagattagagcaagaaagaatgaatta 566
Query: 684 ctgtgttctgaagtcgagtacatgcagagaagggaaatggag 725
|| | ||||| | ||||||||||||| |||||||||||||
Sbjct: 567 ctaagcgctgaaattgagtacatgcagaaaagggaaatggag 608
>gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. vulgare cDNA clone HB26A20
5-PRIME, mRNA sequence
Length = 554
Score = 315 bits (159), Expect = 2e-084
Identities = 350/413 (84%), Gaps = 3/413 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 143 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 202
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 203 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 262
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 263 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 322
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 323 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 379
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 380 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 439
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 440 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 499
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaa 676
|| ||||| ||| | ||||||| || |||||||||||||||| ||||||
Sbjct: 500 cagctggagggaaggctggacaaaggcctaggaaagattagagcaagaaagaa 552
>gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52B05
5-PRIME, mRNA sequence
Length = 553
Score = 315 bits (159), Expect = 2e-084
Identities = 350/413 (84%), Gaps = 3/413 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 122 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 181
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 182 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 241
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 242 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 301
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 302 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 358
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 359 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 418
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 419 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 478
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaa 676
|| ||||| ||| | ||||||| || |||||||||||||||| ||||||
Sbjct: 479 cagctggagggaaggctggacaaaggcctaggaaagattagagcaagaaagaa 531
>gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52G24
5-PRIME, mRNA sequence
Length = 542
Score = 315 bits (159), Expect = 2e-084
Identities = 350/413 (84%), Gaps = 3/413 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 110 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 169
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 170 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 229
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 230 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 289
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 290 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 346
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 347 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 406
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 407 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 466
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaa 676
|| ||||| ||| | ||||||| || |||||||||||||||| ||||||
Sbjct: 467 cagctggagggaaggctggacaaaggcctaggaaagattagagcaagaaagaa 519
>gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52J05
5-PRIME, mRNA sequence
Length = 574
Score = 315 bits (159), Expect = 2e-084
Identities = 350/413 (84%), Gaps = 3/413 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 142 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 201
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 202 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 261
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 262 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 321
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 322 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 378
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 379 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 438
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 439 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 498
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaaaaagaa 676
|| ||||| ||| | ||||||| || |||||||||||||||| ||||||
Sbjct: 499 cagctggagggaaggctggacaaaggcctaggaaagattagagcaagaaagaa 551
>gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07I15V 5',
mRNA sequence
Length = 700
Score = 311 bits (157), Expect = 3e-083
Identities = 345/407 (84%), Gaps = 3/407 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 154 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 213
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 214 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 273
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 274 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 333
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 334 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 390
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 391 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 450
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaag 623
|||||||||||| | || ||||| ||| | || | ||||||||||||| || || |||
Sbjct: 451 aactccaacaggactctaataggcgataccatggctaccatgagccacagagacctaaag 510
Query: 624 cacttggagactaggttagacaaagctctcggaaagattagagcaaa 670
|| ||||| ||| | ||||||| || |||||||||||||||||
Sbjct: 511 cagctggagggaaggctggacaaaggcctaggaaagattagagcaaa 557
Score = 52.0 bits (26), Expect = 5e-005
Identities = 43/46 (93%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 699 gagtacatgc-agagaagggaaatggag-ttgcagaatgacaactt 742
|||||||||| ||||||||||||||||| ||||||||| |||||||
Sbjct: 588 gagtacatgccagagaagggaaatggagcttgcagaataacaactt 633
>gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55C06
5-PRIME, mRNA sequence
Length = 505
Score = 309 bits (156), Expect = 1e-082
Identities = 380/454 (83%), Gaps = 3/454 (0%)
Strand = Plus / Plus
Query: 295 ggcaggtcaccttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctccg 354
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 17 ggcaggtcaccttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcgg 76
Query: 355 tgctctgcgacgccgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagt 414
||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||| ||||
Sbjct: 77 tgctctgcgacgctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagt 136
Query: 415 acgccaacaacagcgtgaagggcaccattgagaggtacaagaaggcaaccagtgacaact 474
|| ||||||||||||| |||| ||||||||||| |||||||||||||| ||||||| ||
Sbjct: 137 actccaacaacagcgtcaaggcaaccattgagagatacaagaaggcaactagtgacacct 196
Query: 475 ccagcgcagctggtacgattgcagaggtcaccattcagcattacaagcaggaatctgcta 534
||||| |||||||| | |||||| ||| ||||| ||| ||||||||||||| |
Sbjct: 197 ccagc---gctggtacagtcgcagagatcaatgcccagcactaccagcaggaatctgcaa 253
Query: 535 ggctgaggcagcagatcgttaacttgcagaactccaacagggccctgataggtgattcta 594
||||||||| ||||| | ||||||||||||||||||| | || ||||| ||| | |
Sbjct: 254 agctgaggcaacagataaccaccttgcagaactccaacaggactctaataggcgatacca 313
Query: 595 tcacaaccatgagccacaaggaacttaagcacttggagactaggttagacaaagctctcg 654
| | ||||||||||||| || || ||||| ||||| ||| | ||||||| || |
Sbjct: 314 tggctaccatgagccacagagacctaaagcagctggagggaaggctggacaaaggcctag 373
Query: 655 gaaagattagagcaaaaaagaacgatgtgctgtgttctgaagtcgagtacatgcagagaa 714
||||||||||||||| |||||| || | || | ||||| | ||||||||||||||||
Sbjct: 374 gaaagattagagcaagaaagaatgaattactaagcgctgaaattgagtacatgcagagaa 433
Query: 715 gggaaatggagttgcagaatgacaacttgtactt 748
||||||||||| |||||||| ||||||| |||||
Sbjct: 434 gggaaatggagctgcagaataacaacttctactt 467
>gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06M13V 5',
mRNA sequence
Length = 700
Score = 307 bits (155), Expect = 5e-082
Identities = 301/349 (86%), Gaps = 3/349 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 226 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 285
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 286 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 345
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 346 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 405
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 406 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 462
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 463 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 522
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccaca 612
|||||||||||| | || ||||| ||| | || | |||||||||||||
Sbjct: 523 aactccaacaggactctaataggcgataccatggctaccatgagccaca 571
Score = 40.1 bits (20), Expect = 0.19
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Plus
Query: 699 gagtacatgcagagaa-gggaaatggag 725
|||||||||||||||| |||||||||||
Sbjct: 660 gagtacatgcagagaaggggaaatggag 687
>gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007K02f, mRNA sequence
Length = 832
Score = 307 bits (155), Expect = 5e-082
Identities = 301/349 (86%), Gaps = 3/349 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 6 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 65
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 66 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 125
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 126 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 185
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 186 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 242
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 243 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 302
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccaca 612
|||||||||||| | || ||||| ||| | || | |||||||||||||
Sbjct: 303 aactccaacaggactctaataggcgataccatggctaccatgagccaca 351
Score = 60.0 bits (30), Expect = 2e-007
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 699 gagtacatgcagagaagggaaatggagttgcagaatgacaacttgtactt 748
||||||||||||||| ||||||||||| |||||||| ||||||| |||||
Sbjct: 437 gagtacatgcagaga-gggaaatggagctgcagaataacaacttctactt 485
>gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094C05f, mRNA sequence
Length = 916
Score = 307 bits (155), Expect = 5e-082
Identities = 301/349 (86%), Gaps = 3/349 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 109 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 168
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 169 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 228
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 229 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 288
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 289 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 345
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 346 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 405
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccaca 612
|||||||||||| | || ||||| ||| | || | |||||||||||||
Sbjct: 406 aactccaacaggactctaataggcgataccatggctaccatgagccaca 454
Score = 42.1 bits (21), Expect = 0.047
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 699 gagtacatgcagagaa-gggaaatggagttgca 730
|||||||||||||||| ||||||||||| ||||
Sbjct: 541 gagtacatgcagagaangggaaatggagctgca 573
>gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. vulgare cDNA clone HI01N16
5-PRIME, mRNA sequence
Length = 547
Score = 307 bits (155), Expect = 5e-082
Identities = 301/349 (86%), Gaps = 3/349 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 163 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 222
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 223 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 282
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 283 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 342
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 343 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 399
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 400 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 459
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccaca 612
|||||||||||| | || ||||| ||| | || | |||||||||||||
Sbjct: 460 aactccaacaggactctaataggcgataccatggctaccatgagccaca 508
>gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62N08
5-PRIME, mRNA sequence
Length = 546
Score = 307 bits (155), Expect = 5e-082
Identities = 301/349 (86%), Gaps = 3/349 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 163 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 222
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 223 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 282
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 283 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 342
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 343 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 399
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 400 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 459
Query: 564 aactccaacagggccctgataggtgattctatcacaaccatgagccaca 612
|||||||||||| | || ||||| ||| | || | |||||||||||||
Sbjct: 460 aactccaacaggactctaataggcgataccatggctaccatgagccaca 508
>gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60L09
5-PRIME, mRNA sequence
Length = 479
Score = 305 bits (154), Expect = 2e-081
Identities = 273/312 (87%), Gaps = 3/312 (0%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 151 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 210
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 211 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 270
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 271 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 330
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtc 503
||||| |||||||||||||| ||||||| ||||||| |||||||| | |||||| ||
Sbjct: 331 gagagatacaagaaggcaactagtgacacctccagc---gctggtacagtcgcagagatc 387
Query: 504 accattcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcag 563
| ||||| ||| ||||||||||||| | ||||||||| ||||| | |||||||
Sbjct: 388 aatgcccagcactaccagcaggaatctgcaaagctgaggcaacagataaccaccttgcag 447
Query: 564 aactccaacagg 575
||||||||||||
Sbjct: 448 aactccaacagg 459
>gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E09T 5',
mRNA sequence
Length = 673
Score = 301 bits (152), Expect = 3e-080
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 214 gagatcaagcgcatcgagaacaccaccaaccggcaggtcaccttctgcaagcgccgcaac 273
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| ||
Sbjct: 274 ggcctcctcaagaaggcgtacgagctctcggtgctctgtgacgccgaggtcgccctcgtc 333
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||||||||||||||||||||||||||||||| | |||||||| ||||| | |||||||
Sbjct: 334 gtcttctccagccgcggccgcctctacgagtactcaaacaacagtgtgaaagccaccatt 393
Query: 444 gagaggtacaagaaggcaaccagtgaca 471
||||||||||| ||||| | ||||||||
Sbjct: 394 gagaggtacaaaaaggccaacagtgaca 421
>gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09P23
5-PRIME, mRNA sequence
Length = 628
Score = 301 bits (152), Expect = 3e-080
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 163 gagatcaagcgcatcgagaacaccaccaaccggcaggtcaccttctgcaagcgccgcaac 222
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| ||
Sbjct: 223 ggcctcctcaagaaggcgtacgagctctcggtgctctgtgacgccgaggtcgccctcgtc 282
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||||||||||||||||||||||||||||||| | |||||||| ||||| | |||||||
Sbjct: 283 gtcttctccagccgcggccgcctctacgagtactcaaacaacagtgtgaaagccaccatt 342
Query: 444 gagaggtacaagaaggcaaccagtgaca 471
||||||||||| ||||| | ||||||||
Sbjct: 343 gagaggtacaaaaaggccaacagtgaca 370
>gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D17
5-PRIME, mRNA sequence
Length = 624
Score = 301 bits (152), Expect = 3e-080
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 227 gagatcaagcgcatcgagaacaccaccaaccggcaggtcaccttctgcaagcgccgcaac 286
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| ||
Sbjct: 287 ggcctcctcaagaaggcgtacgagctctcggtgctctgtgacgccgaggtcgccctcgtc 346
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||||||||||||||||||||||||||||||| | |||||||| ||||| | |||||||
Sbjct: 347 gtcttctccagccgcggccgcctctacgagtactcaaacaacagtgtgaaagccaccatt 406
Query: 444 gagaggtacaagaaggcaaccagtgaca 471
||||||||||| ||||| | ||||||||
Sbjct: 407 gagaggtacaaaaaggccaacagtgaca 434
>gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. vulgare cDNA clone HM11K13
5-PRIME, mRNA sequence
Length = 568
Score = 301 bits (152), Expect = 3e-080
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 227 gagatcaagcgcatcgagaacaccaccaaccggcaggtcaccttctgcaagcgccgcaac 286
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| ||
Sbjct: 287 ggcctcctcaagaaggcgtacgagctctcggtgctctgtgacgccgaggtcgccctcgtc 346
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||||||||||||||||||||||||||||||| | |||||||| ||||| | |||||||
Sbjct: 347 gtcttctccagccgcggccgcctctacgagtactcaaacaacagtgtgaaagccaccatt 406
Query: 444 gagaggtacaagaaggcaaccagtgaca 471
||||||||||| ||||| | ||||||||
Sbjct: 407 gagaggtacaaaaaggccaacagtgaca 434
>gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. vulgare cDNA clone HI11F23
5-PRIME, mRNA sequence
Length = 580
Score = 301 bits (152), Expect = 3e-080
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 227 gagatcaagcgcatcgagaacaccaccaaccggcaggtcaccttctgcaagcgccgcaac 286
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| ||
Sbjct: 287 ggcctcctcaagaaggcgtacgagctctcggtgctctgtgacgccgaggtcgccctcgtc 346
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||||||||||||||||||||||||||||||| | |||||||| ||||| | |||||||
Sbjct: 347 gtcttctccagccgcggccgcctctacgagtactcaaacaacagtgtgaaagccaccatt 406
Query: 444 gagaggtacaagaaggcaaccagtgaca 471
||||||||||| ||||| | ||||||||
Sbjct: 407 gagaggtacaaaaaggccaacagtgaca 434
>gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. vulgare cDNA clone HB11E16
5-PRIME, mRNA sequence
Length = 463
Score = 297 bits (150), Expect = 5e-079
Identities = 201/218 (92%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 169 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 228
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 229 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 288
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 289 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 348
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgc 481
||||| |||||||||||||| ||||||| |||||||||
Sbjct: 349 gagagatacaagaaggcaactagtgacacctccagcgc 386
>gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 1 HvAG1 (AG1)
mRNA, complete cds
Length = 1163
Score = 285 bits (144), Expect = 2e-075
Identities = 192/208 (92%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 157 gagatcaagcgcatcgagaacaccaccaaccggcaggtcaccttctgcaagcgccgcaac 216
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| ||
Sbjct: 217 ggcctcctcaagaaggcgtacgagctctcggtgctctgtgacgccgaggtcgccctcgtc 276
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||||||||||||||| ||||||||||| ||| | |||||||| ||||| | |||||||
Sbjct: 277 gtcttctccagccgcgggcgcctctacgaatactcaaacaacagtgtgaaagccaccatt 336
Query: 444 gagaggtacaagaaggcaaccagtgaca 471
||||||||||| ||||| | ||||||||
Sbjct: 337 gagaggtacaaaaaggccaacagtgaca 364
>gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_A06 5', mRNA sequence
Length = 372
Score = 281 bits (142), Expect = 3e-074
Identities = 199/218 (91%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 131 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 190
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 191 ggactcctgaagaaagcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 250
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 251 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 310
Query: 444 gagaggtacaagaaggcaaccagtgacaactccagcgc 481
||||| |||||||||||||| ||||||| || ||||||
Sbjct: 311 gagagatacaagaaggcaactagtgacaccttcagcgc 348
>gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010L12f, mRNA sequence
Length = 854
Score = 278 bits (140), Expect = 5e-073
Identities = 286/334 (85%), Gaps = 3/334 (0%)
Strand = Plus / Plus
Query: 279 gagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctcctcaagaag 338
||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 171 gagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaacggactcctgaagaag 230
Query: 339 gcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccagccgc 398
|||||||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||
Sbjct: 231 gcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtcgtcttttccagccgc 290
Query: 399 ggccgcctctacgagtacgccaacaacagcgtgaagggcaccattgagaggtacaagaag 458
|| |||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||||
Sbjct: 291 gggcgcctctatgagtactccaacaacagcgtcaaggcaaccattgagagatacaagaag 350
Query: 459 gcaaccagtgacaactccagcgcagctggtacgattgcagaggtcaccattcagcattac 518
||||| ||||||| ||||||| |||||||| | |||||| ||| ||||| |||
Sbjct: 351 gcaactagtgacacctccagc---gctggtacagtcgcagagatcaatgcccagcactac 407
Query: 519 aagcaggaatctgctaggctgaggcagcagatcgttaacttgcagaactccaacagggcc 578
||||||||||||| | ||||||||| ||||| | ||||||||||||||||||| |
Sbjct: 408 cagcaggaatctgcaaagctgaggcaacagataaccaccttgcagaactccaacaggact 467
Query: 579 ctgataggtgattctatcacaaccatgagccaca 612
|| ||||| ||| | || | |||||||||||||
Sbjct: 468 ctaataggcgataccatggctaccatgagccaca 501
Score = 60.0 bits (30), Expect = 2e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 699 gagtacatgcagagaagggaaatggagttgcagaatgacaacttgtactt 748
|||||||||||||||||||||| || | |||||||| ||||||| |||||
Sbjct: 587 gagtacatgcagagaagggaaagggggctgcagaataacaacttttactt 636
>gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64F07
5-PRIME, mRNA sequence
Length = 336
Score = 272 bits (137), Expect = 3e-071
Identities = 182/197 (92%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 140 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 199
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 200 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 259
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccatt 443
||||| ||||||||||| |||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 260 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccatt 319
Query: 444 gagaggtacaagaaggc 460
||||| |||||||||||
Sbjct: 320 gagagatacaagaaggc 336
>gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0008A23f, mRNA sequence
Length = 825
Score = 270 bits (136), Expect = 1e-070
Identities = 376/454 (82%), Gaps = 4/454 (0%)
Strand = Plus / Plus
Query: 295 ggcaggtcaccttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctccg 354
||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 162 ggcaggtcaccttctgcgagcgccgcaacggactcctgaagaaggcgtacgagctctcgg 221
Query: 355 tgctctgcgacgccgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagt 414
||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||| ||||
Sbjct: 222 tgctctgcgacgctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagt 281
Query: 415 acgccaacaacagcgtgaagggcaccattgagaggtacaagaaggcaaccagtgacaact 474
|| ||||||||||||| |||| ||||||||||| |||||||||||||| ||||||| ||
Sbjct: 282 actccaacaacagcgtcaaggcaaccattgagagatacaagaaggcaactagtgacacct 341
Query: 475 ccagcgcagctggtacgattgcagaggtcaccattcagcattacaagcaggaatctgcta 534
||||| |||||||| | |||||| ||| ||||| ||| ||||||||||||| |
Sbjct: 342 ccagc---gctggtacagtcgcagagatcaatgcccagcactaccagcaggaatctgcaa 398
Query: 535 ggctgaggcagcagatcgttaacttgcagaactccaacagggccctgataggtgattcta 594
||||||||| ||||| | ||||||||||||||||||| | || ||||| ||| | |
Sbjct: 399 agctgaggcaacagataaccaccttgcagaactccaacaggactctaataggcgatacca 458
Query: 595 tcacaaccatgagccacaaggaacttaagcacttggagactaggttagacaaagctctcg 654
| | ||||||||||||| || || ||||| ||||| ||| | ||||||| || |
Sbjct: 459 tggctaccatgagccacagagacctaaagcagctggagggaaggctggacaaaggcctag 518
Query: 655 gaaagattagagcaaaaaagaacgatgtgctgtgttctgaagtcgagtacatgcagagaa 714
||||||||||||||| |||||| || | || | ||||| | |||||||||||||| |
Sbjct: 519 gaaagattagagcaagaaagaatgaattactaagcgctgaaattgagtacatgcagag-a 577
Query: 715 gggaaatggagttgcagaatgacaacttgtactt 748
||| ||||||| |||| ||| ||||||| |||||
Sbjct: 578 ggggaatggagctgcaaaataacaacttctactt 611
>gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0016H10f, mRNA sequence
Length = 471
Score = 246 bits (124), Expect = 2e-063
Identities = 192/215 (89%)
Strand = Plus / Plus
Query: 267 atcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggc 326
||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 88 atcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaacgga 147
Query: 327 ctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtc 386
||||| |||||||||||||||||||| |||||||||||||| |||||||||||| |||||
Sbjct: 148 ctcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtcgtc 207
Query: 387 ttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccattgag 446
|| ||||||||||| |||||||| |||||| |||||||||||| | | |||||||||
Sbjct: 208 ttttccagccgcgggcgcctctatgagtactccaacaacagcggttaagcaaccattgag 267
Query: 447 aggtacaagaaggcaaccagtgacaactccagcgc 481
|| |||||||||| || ||||||| || ||||||
Sbjct: 268 agatacaagaagggcactagtgacacctncagcgc 302
>gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_L16 5', mRNA sequence
Length = 524
Score = 244 bits (123), Expect = 6e-063
Identities = 156/167 (93%)
Strand = Plus / Plus
Query: 264 gagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaac 323
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 354 gagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaac 413
Query: 324 ggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 383
|| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 414 ggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtc 473
Query: 384 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgt 430
||||| ||||||||||| |||||||| |||||| |||||||||||||
Sbjct: 474 gtcttttccagccgcgggcgcctctatgagtactccaacaacagcgt 520
>gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. vulgare cDNA clone HA17E15
5-PRIME, mRNA sequence
Length = 514
Score = 240 bits (121), Expect = 1e-061
Identities = 339/411 (82%), Gaps = 3/411 (0%)
Strand = Plus / Plus
Query: 338 ggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccagccg 397
||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||
Sbjct: 11 ggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtcgtcttttccagccg 70
Query: 398 cggccgcctctacgagtacgccaacaacagcgtgaagggcaccattgagaggtacaagaa 457
||| |||||||| |||||| ||||||||||||| |||| ||||||||||| ||||||||
Sbjct: 71 cgggcgcctctatgagtactccaacaacagcgtcaaggcaaccattgagagatacaagaa 130
Query: 458 ggcaaccagtgacaactccagcgcagctggtacgattgcagaggtcaccattcagcatta 517
|||||| ||||||| ||||||| |||||||| | |||||| ||| ||||| ||
Sbjct: 131 ggcaactagtgacacctccagc---gctggtacagtcgcagagatcaatgcccagcacta 187
Query: 518 caagcaggaatctgctaggctgaggcagcagatcgttaacttgcagaactccaacagggc 577
| ||||||||||||| | ||||||||| ||||| | ||||||||||||||||||| |
Sbjct: 188 ccagcaggaatctgcaaagctgaggcaacagataaccaccttgcagaactccaacaggac 247
Query: 578 cctgataggtgattctatcacaaccatgagccacaaggaacttaagcacttggagactag 637
|| ||||| ||| | || | ||||||||||||| || || ||||| ||||| ||
Sbjct: 248 tctaataggcgataccatggctaccatgagccacagagacctaaagcagctggagggaag 307
Query: 638 gttagacaaagctctcggaaagattagagcaaaaaagaacgatgtgctgtgttctgaagt 697
| | ||||||| || |||||||||||||||| |||||| || | || | ||||| |
Sbjct: 308 gctggacaaaggcctaggaaagattagagcaagaaagaatgaattactaagcgctgaaat 367
Query: 698 cgagtacatgcagagaagggaaatggagttgcagaatgacaacttgtactt 748
||||||||||||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 368 tgagtacatgcagagaagggaaatggagctgcagaataacaacttctactt 418
>gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O149 5-PRIME, mRNA sequence
Length = 778
Score = 208 bits (105), Expect = 4e-052
Identities = 135/145 (93%)
Strand = Plus / Plus
Query: 270 aagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctc 329
|||||||||||||||| || |||| ||||||||||||||| |||||||||||||||||||
Sbjct: 14 aagcgcatcgagaacaagatcaaccggcaggtcaccttctccaagcgccgcaacggcctc 73
Query: 330 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 389
||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 74 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtggcgctcatcatcttc 133
Query: 390 tccagccgcggccgcctctacgagt 414
|||||||||||| ||||||||||
Sbjct: 134 tccagccgcggcaagctctacgagt 158
>gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6-like protein mRNA,
complete cds
Length = 1464
Score = 208 bits (105), Expect = 4e-052
Identities = 135/145 (93%)
Strand = Plus / Plus
Query: 270 aagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctc 329
|||||||||||||||| || |||| ||||||||||||||| |||||||||||||||||||
Sbjct: 411 aagcgcatcgagaacaagatcaaccggcaggtcaccttctccaagcgccgcaacggcctc 470
Query: 330 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 389
||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 471 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtggcgctcatcatcttc 530
Query: 390 tccagccgcggccgcctctacgagt 414
|||||||||||| ||||||||||
Sbjct: 531 tccagccgcggcaagctctacgagt 555
>gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. vulgare cDNA clone HF04I23
5-PRIME, mRNA sequence
Length = 649
Score = 204 bits (103), Expect = 6e-051
Identities = 133/143 (93%)
Strand = Plus / Plus
Query: 272 gcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctcct 331
|||||||||||||| || |||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 10 gcgcatcgagaacaagatcaaccggcaggtcaccttctccaagcgccgcaacggcctcct 69
Query: 332 caagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctc 391
||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 70 caagaaggcctacgagctctccgtgctctgcgacgccgaggtggcgctcatcatcttctc 129
Query: 392 cagccgcggccgcctctacgagt 414
|||||||||| ||||||||||
Sbjct: 130 cagccgcggcaagctctacgagt 152
>gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. vulgare cDNA clone HA02K21
5-PRIME, mRNA sequence
Length = 606
Score = 192 bits (97), Expect = 2e-047
Identities = 148/165 (89%)
Strand = Plus / Plus
Query: 297 caggtcaccttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtg 356
||||| ||||||||||||||||| ||||| ||| | |||||||| ||||||||||||||
Sbjct: 151 caggtgaccttctgcaagcgccggaacgggctcttgaagaaggcctacgagctctccgtc 210
Query: 357 ctctgcgacgccgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtac 416
|| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 211 ctgtgcgacgccgaggtggcgctcatcgtcttttccagccgcggccgcctctatgagtac 270
Query: 417 gccaacaacagcgtgaagggcaccattgagaggtacaagaaggca 461
|||||||||| || |||| || |||||||||||||||||||||
Sbjct: 271 tccaacaacagtgtcaaggctacaattgagaggtacaagaaggca 315
>gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. vulgare cDNA clone HA14O21
5-PRIME, mRNA sequence
Length = 633
Score = 192 bits (97), Expect = 2e-047
Identities = 148/165 (89%)
Strand = Plus / Plus
Query: 297 caggtcaccttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtg 356
||||| ||||||||||||||||| ||||| ||| | |||||||| ||||||||||||||
Sbjct: 122 caggtgaccttctgcaagcgccggaacgggctcttgaagaaggcctacgagctctccgtc 181
Query: 357 ctctgcgacgccgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtac 416
|| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 182 ctgtgcgacgccgaggtggcgctcatcgtcttttccagccgcggccgcctctatgagtac 241
Query: 417 gccaacaacagcgtgaagggcaccattgagaggtacaagaaggca 461
|||||||||| || |||| || |||||||||||||||||||||
Sbjct: 242 tccaacaacagtgtcaaggctacaattgagaggtacaagaaggca 286
>gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. vulgare cDNA clone HA16F04
5-PRIME, mRNA sequence
Length = 629
Score = 192 bits (97), Expect = 2e-047
Identities = 148/165 (89%)
Strand = Plus / Plus
Query: 297 caggtcaccttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtg 356
||||| ||||||||||||||||| ||||| ||| | |||||||| ||||||||||||||
Sbjct: 174 caggtgaccttctgcaagcgccggaacgggctcttgaagaaggcctacgagctctccgtc 233
Query: 357 ctctgcgacgccgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtac 416
|| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 234 ctgtgcgacgccgaggtggcgctcatcgtcttttccagccgcggccgcctctatgagtac 293
Query: 417 gccaacaacagcgtgaagggcaccattgagaggtacaagaaggca 461
|||||||||| || |||| || |||||||||||||||||||||
Sbjct: 294 tccaacaacagtgtcaaggctacaattgagaggtacaagaaggca 338
>gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51D24
5-PRIME, mRNA sequence
Length = 490
Score = 192 bits (97), Expect = 2e-047
Identities = 148/165 (89%)
Strand = Plus / Plus
Query: 297 caggtcaccttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtg 356
||||| ||||||||||||||||| ||||| ||| | |||||||| ||||||||||||||
Sbjct: 154 caggtgaccttctgcaagcgccggaacgggctcttgaagaaggcctacgagctctccgtc 213
Query: 357 ctctgcgacgccgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtac 416
|| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 214 ctgtgcgacgccgaggtggcgctcatcgtcttttccagccgcggccgcctctatgagtac 273
Query: 417 gccaacaacagcgtgaagggcaccattgagaggtacaagaaggca 461
|||||||||| || |||| || |||||||||||||||||||||
Sbjct: 274 tccaacaacagtgtcaaggctacaattgagaggtacaagaaggca 318
>gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39J06
5-PRIME, mRNA sequence
Length = 607
Score = 184 bits (93), Expect = 5e-045
Identities = 147/165 (89%)
Strand = Plus / Plus
Query: 297 caggtcaccttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtg 356
||||| ||||||||||||||||| ||||| ||| | |||||||| |||||||||| |||
Sbjct: 119 caggtgaccttctgcaagcgccggaacgggctcttgaagaaggcctacgagctctacgtc 178
Query: 357 ctctgcgacgccgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtac 416
|| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 179 ctgtgcgacgccgaggtggcgctcatcgtcttttccagccgcggccgcctctatgagtac 238
Query: 417 gccaacaacagcgtgaagggcaccattgagaggtacaagaaggca 461
|||||||||| || |||| || |||||||||||||||||||||
Sbjct: 239 tccaacaacagtgtcaaggctacaattgagaggtacaagaaggca 283
>gb|BG414778.2|BG414778 HVSMEk0003L01f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003L01f, mRNA sequence
Length = 601
Score = 180 bits (91), Expect = 8e-044
Identities = 147/163 (90%), Gaps = 2/163 (1%)
Strand = Plus / Plus
Query: 273 cgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctcctc 332
||||||||||||||||| ||| |||| |||||||||||||||||||||||||| |||||
Sbjct: 159 cgcatcgagaacacgacgaaccggcaagtcaccttctgcaagcgccgcaacggactcctg 218
Query: 333 aagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctcc 392
|||||||||||||| ||||| |||||||||||||| |||||||||||| ||||||| |||
Sbjct: 219 aagaaggcgtacgaactctcggtgctctgcgacgctgaggtcgcgctcgtcgtctt-tcc 277
Query: 393 agccgcggccgcctctacgagtacgccaacaacagcgtgaagg 435
|||||||| ||||| || |||||| |||||||||||| ||||
Sbjct: 278 agccgcgggcgcctttatgagtac-tcaacaacagcgtcaagg 319
>gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0024K11f, mRNA sequence
Length = 885
Score = 176 bits (89), Expect = 1e-042
Identities = 116/125 (92%)
Strand = Plus / Plus
Query: 290 caacaggcaggtcaccttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagct 349
|||| ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||
Sbjct: 6 caaccggcaggtcaccttctccaagcgccgcaacggcctccttaagaaggcctacgagct 65
Query: 350 ctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccagccgcggccgcctcta 409
|||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||
Sbjct: 66 ctccgtgctctgcgacgccgaggtggcgctcatcatcttctccagccgcggcaagctcta 125
Query: 410 cgagt 414
|||||
Sbjct: 126 cgagt 130
>gb|BU978508.1|BU978508 HA13H01r HA Hordeum vulgare subsp. vulgare cDNA clone HA13H01
5-PRIME, mRNA sequence
Length = 445
Score = 165 bits (83), Expect = 5e-039
Identities = 131/147 (89%)
Strand = Plus / Plus
Query: 268 tcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcc 327
||||||| |||||||||| || |||| | |||||||||||| |||||||||||||||||
Sbjct: 249 tcaagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacggcc 308
Query: 328 tcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtct 387
| ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| |||
Sbjct: 309 tgctcaagaaggcctacgagctctccgtgctctgcgatgccgaggtcgccctcatcatct 368
Query: 388 tctccagccgcggccgcctctacgagt 414
|||||| ||||||| ||||||||||
Sbjct: 369 tctccaaccgcggcaagctctacgagt 395
>gb|BU979387.1|BU979387 HA15P22r HA Hordeum vulgare subsp. vulgare cDNA clone HA15P22
5-PRIME, mRNA sequence
Length = 528
Score = 165 bits (83), Expect = 5e-039
Identities = 131/147 (89%)
Strand = Plus / Plus
Query: 268 tcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcc 327
||||||| |||||||||| || |||| | |||||||||||| |||||||||||||||||
Sbjct: 251 tcaagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacggcc 310
Query: 328 tcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtct 387
| ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| |||
Sbjct: 311 tgctcaagaaggcctacgagctctccgtgctctgcgatgccgaggtcgccctcatcatct 370
Query: 388 tctccagccgcggccgcctctacgagt 414
|||||| ||||||| ||||||||||
Sbjct: 371 tctccaaccgcggcaagctctacgagt 397
>gb|BU997161.1|BU997161 HI07B21r HI Hordeum vulgare subsp. vulgare cDNA clone HI07B21
5-PRIME, mRNA sequence
Length = 660
Score = 165 bits (83), Expect = 5e-039
Identities = 131/147 (89%)
Strand = Plus / Plus
Query: 268 tcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcc 327
||||||| |||||||||| || |||| | |||||||||||| |||||||||||||||||
Sbjct: 254 tcaagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacggcc 313
Query: 328 tcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtct 387
| ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| |||
Sbjct: 314 tgctcaagaaggcctacgagctctccgtgctctgcgatgccgaggtcgccctcatcatct 373
Query: 388 tctccagccgcggccgcctctacgagt 414
|||||| ||||||| ||||||||||
Sbjct: 374 tctccaaccgcggcaagctctacgagt 400
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 162,168
Number of Sequences: 312970
Number of extensions: 162168
Number of successful extensions: 49860
Number of sequences better than 0.5: 246
Number of HSP's better than 0.5 without gapping: 244
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 49243
Number of HSP's gapped (non-prelim): 522
length of query: 1354
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1335
effective length of database: 169,188,109
effective search space: 225866125515
effective search space used: 225866125515
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)