BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619325.2.1
(1403 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM817184.1|BM817184 HC109E09_T3.ab1 HC Hordeum vulgare s... 416 e-115
gb|BQ763481.1|BQ763481 EBro02_SQ008_C18_R root, 3 week, hyd... 398 e-109
gb|BM370411.2|BM370411 EBro08_SQ004_C11_R root, 3 week, dro... 369 e-100
gb|BQ763726.1|BQ763726 EBro03_SQ005_B10_R root, 3 week, wat... 301 3e-080
gb|BF267768.2|BF267768 HV_CEa0018N11f Hordeum vulgare seedl... 281 3e-074
gb|BF267814.2|BF267814 HV_CEa0018P11f Hordeum vulgare seedl... 258 4e-067
gb|BQ763953.1|BQ763953 EBro03_SQ005_J19_R root, 3 week, wat... 232 3e-059
gb|BM442793.2|BM442793 EBro02_SQ001_E08_R root, 3 week, hyd... 228 4e-058
gb|BQ662082.1|BQ662082 HR01H14u HR Hordeum vulgare subsp. v... 194 5e-048
gb|BF258927.2|BF258927 HVSMEf0017B11f Hordeum vulgare seedl... 186 1e-045
gb|BQ767861.1|BQ767861 EBro08_SQ010_E03_R root, 3 week, dro... 184 5e-045
gb|BF258593.2|BF258593 HVSMEf0016C14f Hordeum vulgare seedl... 178 3e-043
gb|BQ766290.1|BQ766290 EBro08_SQ005_F15_R root, 3 week, dro... 172 2e-041
gb|BQ467960.1|BQ467960 HR01H14r HR Hordeum vulgare subsp. v... 155 5e-036
gb|BF260581.1|BF260581 HVSMEf0022G06f Hordeum vulgare seedl... 153 2e-035
gb|BM443139.2|BM443139 EBro02_SQ002_N01_R root, 3 week, hyd... 151 7e-035
gb|BI778693.2|BI778693 EBro01_SQ001_B17_R root, 3 week, hyd... 133 2e-029
gb|BI777629.2|BI777629 EBro08_SQ001_B05_R root, 3 week, dro... 121 7e-026
gb|AL504245.1|AL504245 AL504245 Hordeum vulgare Barke roots... 103 2e-020
gb|BQ465202.1|BQ465202 HU02O23r HU Hordeum vulgare subsp. v... 96 4e-018
gb|BQ465796.1|BQ465796 HU04L10r HU Hordeum vulgare subsp. v... 96 4e-018
gb|BM443130.2|BM443130 EBro02_SQ002_L06_R root, 3 week, hyd... 92 6e-017
gb|BQ461135.1|BQ461135 HE01C07r HE Hordeum vulgare subsp. v... 90 2e-016
gb|BI951776.1|BI951776 HVSMEm0002L16f Hordeum vulgare green... 76 4e-012
gb|BI952845.1|BI952845 HVSMEm0007P04f Hordeum vulgare green... 76 4e-012
gb|BI954451.1|BI954451 HVSMEm0017P19f Hordeum vulgare green... 76 4e-012
gb|BI954673.1|BI954673 HVSMEm0019C12f Hordeum vulgare green... 76 4e-012
gb|BI956180.1|BI956180 HVSMEm0025O19f Hordeum vulgare green... 76 4e-012
gb|BE216352.1|BE216352 HV_CEb0010E08f Hordeum vulgare seedl... 76 4e-012
gb|BE215675.2|BE215675 HV_CEb0007N22f Hordeum vulgare seedl... 76 4e-012
gb|BE519974.2|BE519974 HV_CEb0021O16f Hordeum vulgare seedl... 76 4e-012
gb|BF626685.3|BF626685 HVSMEb0001B05f Hordeum vulgare seedl... 76 4e-012
gb|BF627973.3|BF627973 HVSMEb0002D13f Hordeum vulgare seedl... 76 4e-012
gb|BF620751.2|BF620751 HVSMEc0020M03f Hordeum vulgare seedl... 74 1e-011
gb|BF259360.2|BF259360 HVSMEf0019G04f Hordeum vulgare seedl... 74 1e-011
gb|BI960099.1|BI960099 HVSMEn0023D18f Hordeum vulgare rachi... 74 1e-011
gb|CA017900.1|CA017900 HV06L11r HV Hordeum vulgare subsp. v... 74 1e-011
gb|CA019914.1|CA019914 HV13L06r HV Hordeum vulgare subsp. v... 74 1e-011
gb|AL450807.1|AL450807 AL450807 Hordeum vulgare Barke etiol... 70 2e-010
gb|AL504878.1|AL504878 AL504878 Hordeum vulgare Barke roots... 70 2e-010
gb|AV916939.1|AV916939 AV916939 K. Sato unpublished cDNA li... 70 2e-010
gb|CB878214.1|CB878214 HP07L18T HP Hordeum vulgare subsp. v... 70 2e-010
gb|CB878922.1|CB878922 HP10E23T HP Hordeum vulgare subsp. v... 70 2e-010
gb|AL503918.1|AL503918 AL503918 Hordeum vulgare Barke roots... 68 9e-010
gb|BF628685.2|BF628685 HVSMEb0007A23f Hordeum vulgare seedl... 68 9e-010
gb|BG300276.1|BG300276 HVSMEb0011O12f Hordeum vulgare seedl... 68 9e-010
gb|BG300359.1|BG300359 HVSMEb0016B04f Hordeum vulgare seedl... 68 9e-010
gb|BG366591.1|BG366591 HVSMEi0007J01f Hordeum vulgare 20 DA... 68 9e-010
gb|BF263244.2|BF263244 HV_CEa0006D18f Hordeum vulgare seedl... 68 9e-010
gb|BF264659.2|BF264659 HV_CEa0010A08f Hordeum vulgare seedl... 68 9e-010
gb|BF265587.2|BF265587 HV_CEa0012L15f Hordeum vulgare seedl... 68 9e-010
gb|BF265694.2|BF265694 HV_CEa0013B11f Hordeum vulgare seedl... 68 9e-010
gb|AL503614.1|AL503614 AL503614 Hordeum vulgare Barke roots... 66 3e-009
gb|AL505521.1|AL505521 AL505521 Hordeum vulgare Barke roots... 66 3e-009
gb|BF258178.2|BF258178 HVSMEf0015A09f Hordeum vulgare seedl... 66 3e-009
gb|BI959710.1|BI959710 HVSMEn0020O14f Hordeum vulgare rachi... 66 3e-009
gb|BF257125.3|BF257125 HVSMEf0011P02f Hordeum vulgare seedl... 66 3e-009
gb|BF260878.3|BF260878 HVSMEf0023C22f Hordeum vulgare seedl... 66 3e-009
gb|BM377980.2|BM377980 EBem04_SQ004_M14_R embryo, 12 DPA, n... 66 3e-009
gb|BI778762.2|BI778762 EBro01_SQ001_G05_R root, 3 week, hyd... 66 3e-009
gb|BI777125.2|BI777125 EBro03_SQ002_A24_R root, 3 week, wat... 66 3e-009
gb|BQ768438.1|BQ768438 EBro08_SQ011_P16_R root, 3 week, dro... 66 3e-009
gb|BQ460486.1|BQ460486 HA09G22r HA Hordeum vulgare subsp. v... 64 1e-008
gb|BQ663505.1|BQ663505 HU02O23u HU Hordeum vulgare subsp. v... 64 1e-008
gb|BQ663944.1|BQ663944 HU04L10u HU Hordeum vulgare subsp. v... 64 1e-008
gb|BQ768141.1|BQ768141 EBro08_SQ010_F20_R root, 3 week, dro... 64 1e-008
gb|AL501077.1|AL501077 AL501077 Hordeum vulgare Barke roots... 62 5e-008
gb|BG301055.1|BG301055 HVSMEb0019H01f Hordeum vulgare seedl... 62 5e-008
gb|BF619877.2|BF619877 HVSMEc0009I18f Hordeum vulgare seedl... 62 5e-008
gb|BF255916.3|BF255916 HVSMEf0008D04f Hordeum vulgare seedl... 62 5e-008
gb|BI777167.2|BI777167 EBro03_SQ002_D20_R root, 3 week, wat... 62 5e-008
gb|BU979090.1|BU979090 HA15C02r HA Hordeum vulgare subsp. v... 62 5e-008
gb|AL504319.1|AL504319 AL504319 Hordeum vulgare Barke roots... 60 2e-007
gb|AL505762.1|AL505762 AL505762 Hordeum vulgare Barke roots... 60 2e-007
gb|BF254185.2|BF254185 HVSMEf0003E03f Hordeum vulgare seedl... 60 2e-007
gb|BG301221.2|BG301221 HVSMEb0019P19f Hordeum vulgare seedl... 60 2e-007
gb|BF263571.3|BF263571 HV_CEa0007B13f Hordeum vulgare seedl... 60 2e-007
gb|BU985389.1|BU985389 HF06P23r HF Hordeum vulgare subsp. v... 60 2e-007
gb|AL503474.1|AL503474 AL503474 Hordeum vulgare Barke roots... 58 8e-007
gb|BF625705.2|BF625705 HVSMEa0013F06f Hordeum vulgare seedl... 58 8e-007
gb|BF627148.2|BF627148 HVSMEb0004B06f Hordeum vulgare seedl... 58 8e-007
gb|BF253465.2|BF253465 HVSMEf0001H23f Hordeum vulgare seedl... 58 8e-007
gb|BF256219.3|BF256219 HVSMEf0009C16f Hordeum vulgare seedl... 58 8e-007
gb|BE602254.3|BE602254 HVSMEh0098D17f Hordeum vulgare 5-45 ... 58 8e-007
gb|BG365659.2|BG365659 HVSMEi0003K04f Hordeum vulgare 20 DA... 58 8e-007
gb|BG369910.2|BG369910 HVSMEi0026I06f Hordeum vulgare 20 DA... 58 8e-007
gb|BI781117.2|BI781117 EBma03_SQ001_H19_R maternal, 8 DPA, ... 58 8e-007
gb|BM370877.2|BM370877 EBro04_SQ002_K07_R root, 3 week, sal... 58 8e-007
gb|BM097476.2|BM097476 EBro05_SQ003_K09_R root, 3 week, red... 58 8e-007
gb|BI777969.2|BI777969 EBro07_SQ001_J07_R root, 3 week, red... 58 8e-007
gb|BQ758522.1|BQ758522 EBma07_SQ002_C01_R maternal, 21 DPA,... 58 8e-007
gb|BQ763624.1|BQ763624 EBro02_SQ008_P23_R root, 3 week, hyd... 58 8e-007
gb|BQ766361.1|BQ766361 EBro08_SQ005_C23_R root, 3 week, dro... 58 8e-007
gb|BU973922.1|BU973922 HB26G16r BC Hordeum vulgare subsp. v... 58 8e-007
gb|BU994792.1|BU994792 HM08D11r HM Hordeum vulgare subsp. v... 58 8e-007
gb|CB877775.1|CB877775 HP06B24T HP Hordeum vulgare subsp. v... 58 8e-007
gb|CV060511.1|CV060511 BNEL58h9 Barley EST endosperm librar... 58 8e-007
gb|CV060719.1|CV060719 BNEL60d4 Barley EST endosperm librar... 58 8e-007
gb|BI959702.1|BI959702 HVSMEn0020N23f Hordeum vulgare rachi... 56 3e-006
gb|BQ768821.1|BQ768821 EBro08_SQ012_C24_R root, 3 week, dro... 56 3e-006
gb|BU982434.1|BU982434 HA26I17r HA Hordeum vulgare subsp. v... 56 3e-006
gb|BU983159.1|BU983159 HA28L21r HA Hordeum vulgare subsp. v... 56 3e-006
gb|CA020040.1|CA020040 HV14C15r HV Hordeum vulgare subsp. v... 56 3e-006
gb|CA032297.1|CA032297 HX12J19r HX Hordeum vulgare subsp. v... 56 3e-006
gb|CK124503.1|CK124503 BES1824109g06 BES1824 Hordeum vulgar... 56 3e-006
gb|AL503655.1|AL503655 AL503655 Hordeum vulgare Barke roots... 54 1e-005
gb|AL503882.1|AL503882 AL503882 Hordeum vulgare Barke roots... 54 1e-005
gb|BF258381.2|BF258381 HVSMEf0015J04f Hordeum vulgare seedl... 54 1e-005
gb|BI954294.1|BI954294 HVSMEm0017A16f Hordeum vulgare green... 54 1e-005
gb|BI954572.1|BI954572 HVSMEm0018K24f Hordeum vulgare green... 54 1e-005
gb|BE215115.1|BE215115 HV_CEb0005N17f Hordeum vulgare seedl... 54 1e-005
gb|BF065823.1|BF065823 HV_CEb0014B12f Hordeum vulgare seedl... 54 1e-005
gb|BG416384.1|BG416384 HVSMEk0011O17f Hordeum vulgare testa... 54 1e-005
gb|BI959850.1|BI959850 HVSMEn0022A22f Hordeum vulgare rachi... 54 1e-005
gb|AV915449.1|AV915449 AV915449 K. Sato unpublished cDNA li... 54 1e-005
gb|BM369932.2|BM369932 EBro08_SQ002_G03_R root, 3 week, dro... 54 1e-005
gb|BQ766880.1|BQ766880 EBro08_SQ007_J12_R root, 3 week, dro... 54 1e-005
gb|BQ767215.1|BQ767215 EBro08_SQ008_E08_R root, 3 week, dro... 54 1e-005
gb|BQ768515.1|BQ768515 EBro08_SQ011_N19_R root, 3 week, dro... 54 1e-005
gb|AL503641.1|AL503641 AL503641 Hordeum vulgare Barke roots... 52 5e-005
gb|BG367841.1|BG367841 HVSMEi0013O18f Hordeum vulgare 20 DA... 52 5e-005
gb|BI950074.1|BI950074 HVSMEl0018F18f Hordeum vulgare spike... 52 5e-005
gb|BG366283.2|BG366283 HVSMEi0006J06f Hordeum vulgare 20 DA... 52 5e-005
gb|BG417113.2|BG417113 HVSMEk0016F06f Hordeum vulgare testa... 52 5e-005
gb|BM370497.2|BM370497 EBro08_SQ004_G12_R root, 3 week, dro... 52 5e-005
gb|AL503885.1|AL503885 AL503885 Hordeum vulgare Barke roots... 50 2e-004
gb|BF625544.2|BF625544 HVSMEa0011C20f Hordeum vulgare seedl... 50 2e-004
gb|BF627946.2|BF627946 HVSMEb0006O05f Hordeum vulgare seedl... 50 2e-004
gb|BF618606.2|BF618606 HVSMEc0006K07f Hordeum vulgare seedl... 50 2e-004
gb|BF616802.2|BF616802 HVSMEc0012M16f Hordeum vulgare seedl... 50 2e-004
gb|BF617039.2|BF617039 HVSMEc0014G04f Hordeum vulgare seedl... 50 2e-004
gb|BF620372.2|BF620372 HVSMEc0019K08f Hordeum vulgare seedl... 50 2e-004
gb|BF620798.2|BF620798 HVSMEc0020O05f Hordeum vulgare seedl... 50 2e-004
gb|BF256182.2|BF256182 HVSMEf0009A08f Hordeum vulgare seedl... 50 2e-004
gb|BF261063.2|BF261063 HVSMEf0023K15f Hordeum vulgare seedl... 50 2e-004
gb|BI957601.1|BI957601 HVSMEn0010F08f Hordeum vulgare rachi... 50 2e-004
gb|BI958538.1|BI958538 HVSMEn0015H22f Hordeum vulgare rachi... 50 2e-004
gb|BI959295.1|BI959295 HVSMEn0019C06f Hordeum vulgare rachi... 50 2e-004
gb|BG417623.2|BG417623 HVSMEk0018K24f Hordeum vulgare testa... 50 2e-004
gb|BM374908.1|BM374908 EBma05_SQ003_I04_R maternal, 12 DPA,... 50 2e-004
gb|BQ468840.1|BQ468840 HM02H24r HM Hordeum vulgare subsp. v... 50 2e-004
gb|BQ664493.1|BQ664493 HV03J07u HV Hordeum vulgare subsp. v... 50 2e-004
gb|BU998458.1|BU998458 HI11C02r HI Hordeum vulgare subsp. v... 50 2e-004
gb|BU998705.1|BU998705 HI11O16r HI Hordeum vulgare subsp. v... 50 2e-004
gb|CA019377.1|CA019377 HV11M17r HV Hordeum vulgare subsp. v... 50 2e-004
gb|CA029763.1|CA029763 HX05C10r HX Hordeum vulgare subsp. v... 50 2e-004
gb|CK125378.1|CK125378 BES1824107n11 BES1824 Hordeum vulgar... 50 2e-004
gb|AL450521.1|AL450521 AL450521 Hordeum vulgare Barke etiol... 48 8e-004
gb|AL504291.1|AL504291 AL504291 Hordeum vulgare Barke roots... 48 8e-004
gb|BF622053.1|BF622053 HVSMEa0001K05f Hordeum vulgare seedl... 48 8e-004
gb|BF626296.2|BF626296 HVSMEa0018E11f Hordeum vulgare seedl... 48 8e-004
gb|BF620038.2|BF620038 HVSMEc0011F07f Hordeum vulgare seedl... 48 8e-004
gb|BF254535.2|BF254535 HVSMEf0004E20f Hordeum vulgare seedl... 48 8e-004
gb|BF257704.2|BF257704 HVSMEf0013K08f Hordeum vulgare seedl... 48 8e-004
gb|BF259404.2|BF259404 HVSMEf0019A08f Hordeum vulgare seedl... 48 8e-004
gb|BF259792.2|BF259792 HVSMEf0020E11f Hordeum vulgare seedl... 48 8e-004
gb|BF259871.2|BF259871 HVSMEf0020H22f Hordeum vulgare seedl... 48 8e-004
gb|BE454540.2|BE454540 HVSMEh0094C20f Hordeum vulgare 5-45 ... 48 8e-004
gb|BE454557.2|BE454557 HVSMEh0094E01f Hordeum vulgare 5-45 ... 48 8e-004
gb|BG365612.1|BG365612 HVSMEi0003G08f Hordeum vulgare 20 DA... 48 8e-004
gb|BF628118.3|BF628118 HVSMEb0003C22f Hordeum vulgare seedl... 48 8e-004
gb|BF257410.3|BF257410 HVSMEf0012N08f Hordeum vulgare seedl... 48 8e-004
gb|BM816712.1|BM816712 HB01H08_T3.ab1 HB Hordeum vulgare su... 48 8e-004
gb|BQ468054.1|BQ468054 HR01M21r HR Hordeum vulgare subsp. v... 48 8e-004
gb|BQ471176.1|BQ471176 HV01F23T HV Hordeum vulgare subsp. v... 48 8e-004
gb|BM374414.2|BM374414 EBpi03_SQ003_I23_R pistil, 4 DPA, no... 48 8e-004
gb|BM370739.2|BM370739 EBro04_SQ002_A21_R root, 3 week, sal... 48 8e-004
gb|BM370611.2|BM370611 EBro08_SQ004_L20_R root, 3 week, dro... 48 8e-004
gb|BQ760315.1|BQ760315 EBpi07_SQ003_L20_R pistil, 12 DPA, n... 48 8e-004
gb|BQ760790.1|BQ760790 EBro03_SQ003_H17_R root, 3 week, wat... 48 8e-004
gb|BQ763086.1|BQ763086 EBro02_SQ007_K06_R root, 3 week, hyd... 48 8e-004
gb|BU998025.1|BU998025 HI09M06r HI Hordeum vulgare subsp. v... 48 8e-004
gb|CA029975.1|CA029975 HX05L21r HX Hordeum vulgare subsp. v... 48 8e-004
gb|CA032893.1|CA032893 HX14H24r HX Hordeum vulgare subsp. v... 48 8e-004
gb|AL501063.1|AL501063 AL501063 Hordeum vulgare Barke roots... 46 0.003
gb|AL501648.1|AL501648 AL501648 Hordeum vulgare Barke roots... 46 0.003
gb|AL503679.1|AL503679 AL503679 Hordeum vulgare Barke roots... 46 0.003
gb|BF261118.2|BF261118 HVSMEf0023M22f Hordeum vulgare seedl... 46 0.003
gb|BF629416.3|BF629416 HVSMEb0012D22f Hordeum vulgare seedl... 46 0.003
gb|BF255610.2|BF255610 HVSMEf0007F05f Hordeum vulgare seedl... 46 0.003
gb|BF263705.3|BF263705 HV_CEa0007H04f Hordeum vulgare seedl... 46 0.003
gb|BQ469578.1|BQ469578 HZ01D14r HZ Hordeum vulgare subsp. v... 46 0.003
gb|BQ470900.1|BQ470900 HX04G04r HX Hordeum vulgare subsp. v... 46 0.003
gb|BM377976.2|BM377976 EBem04_SQ004_M10_R embryo, 12 DPA, n... 46 0.003
gb|BI779196.2|BI779196 EBro01_SQ003_E18_R root, 3 week, hyd... 46 0.003
gb|BI777401.2|BI777401 EBro04_SQ001_B20_R root, 3 week, sal... 46 0.003
gb|BQ766340.1|BQ766340 EBro08_SQ005_N18_R root, 3 week, dro... 46 0.003
gb|CA007768.1|CA007768 HU08P09r HU Hordeum vulgare subsp. v... 46 0.003
gb|CA020951.1|CA020951 HZ38I21r HZ Hordeum vulgare subsp. v... 46 0.003
gb|CA024388.1|CA024388 HZ49C19r HZ Hordeum vulgare subsp. v... 46 0.003
gb|AL503342.1|AL503342 AL503342 Hordeum vulgare Barke roots... 44 0.012
gb|AL508098.1|AL508098 AL508098 Hordeum vulgare Barke devel... 44 0.012
gb|AL509011.1|AL509011 AL509011 Hordeum vulgare Barke devel... 44 0.012
gb|BG299330.2|BG299330 HVSMEa0019G22f Hordeum vulgare seedl... 44 0.012
gb|BF260334.1|BF260334 HVSMEf0021L14f Hordeum vulgare seedl... 44 0.012
gb|BF254984.2|BF254984 HVSMEf0005J21f Hordeum vulgare seedl... 44 0.012
gb|BF255149.2|BF255149 HVSMEf0006B11f Hordeum vulgare seedl... 44 0.012
gb|BF260130.2|BF260130 HVSMEf0021D01f Hordeum vulgare seedl... 44 0.012
gb|BF260557.2|BF260557 HVSMEf0022F06f Hordeum vulgare seedl... 44 0.012
gb|BG368743.1|BG368743 HVSMEi0020H06f Hordeum vulgare 20 DA... 44 0.012
gb|BI951493.1|BI951493 HVSMEm0001B21f Hordeum vulgare green... 44 0.012
gb|BI951997.1|BI951997 HVSMEm0004C12f Hordeum vulgare green... 44 0.012
gb|BI952379.1|BI952379 HVSMEm0006C12f Hordeum vulgare green... 44 0.012
gb|BI952385.1|BI952385 HVSMEm0006C18f Hordeum vulgare green... 44 0.012
gb|BI954554.1|BI954554 HVSMEm0018J11f Hordeum vulgare green... 44 0.012
gb|BI955152.1|BI955152 HVSMEm0021K08f Hordeum vulgare green... 44 0.012
gb|BI955203.1|BI955203 HVSMEm0021N22f Hordeum vulgare green... 44 0.012
gb|BI955646.1|BI955646 HVSMEm0023O09f Hordeum vulgare green... 44 0.012
gb|BI955736.1|BI955736 HVSMEm0024E14f Hordeum vulgare green... 44 0.012
gb|BI957348.1|BI957348 HVSMEn0009B12f Hordeum vulgare rachi... 44 0.012
gb|BE214065.1|BE214065 HV_CEb0002B16f Hordeum vulgare seedl... 44 0.012
gb|BE215997.1|BE215997 HV_CEb0009A21f Hordeum vulgare seedl... 44 0.012
gb|BE216803.1|BE216803 HV_CEb0011K04f Hordeum vulgare seedl... 44 0.012
gb|BE519980.1|BE519980 HV_CEb0021P01f Hordeum vulgare seedl... 44 0.012
gb|BF262341.2|BF262341 HV_CEa0003L10f Hordeum vulgare seedl... 44 0.012
gb|BF264384.2|BF264384 HV_CEa0009E13f Hordeum vulgare seedl... 44 0.012
gb|BF265004.2|BF265004 HV_CEa0010P24f Hordeum vulgare seedl... 44 0.012
gb|BF266620.2|BF266620 HV_CEa0015J22f Hordeum vulgare seedl... 44 0.012
gb|BF267576.2|BF267576 HV_CEa0018F04f Hordeum vulgare seedl... 44 0.012
gb|BF267708.2|BF267708 HV_CEa0018K17f Hordeum vulgare seedl... 44 0.012
gb|BF267910.2|BF267910 HV_CEa0019E05f Hordeum vulgare seedl... 44 0.012
gb|BE215250.2|BE215250 HV_CEb0006E13f Hordeum vulgare seedl... 44 0.012
gb|BE216546.2|BE216546 HV_CEb0010M13f Hordeum vulgare seedl... 44 0.012
gb|BF065930.2|BF065930 HV_CEb0014G05f Hordeum vulgare seedl... 44 0.012
gb|BF065954.2|BF065954 HV_CEb0014H05f Hordeum vulgare seedl... 44 0.012
gb|BE558232.2|BE558232 HV_CEb0015J02f Hordeum vulgare seedl... 44 0.012
gb|BE558514.2|BE558514 HV_CEb0018B07f Hordeum vulgare seedl... 44 0.012
gb|BF065109.2|BF065109 HV_CEb0023A20f Hordeum vulgare seedl... 44 0.012
gb|BI958706.1|BI958706 HVSMEn0016E19f Hordeum vulgare rachi... 44 0.012
gb|BI959359.1|BI959359 HVSMEn0019F21f Hordeum vulgare rachi... 44 0.012
gb|BI960469.1|BI960469 HVSMEn0024L08f Hordeum vulgare rachi... 44 0.012
gb|BI960514.1|BI960514 HVSMEn0024N24f Hordeum vulgare rachi... 44 0.012
gb|BF631373.3|BF631373 HVSMEb0015L24f Hordeum vulgare seedl... 44 0.012
gb|BF260922.3|BF260922 HVSMEf0023E18f Hordeum vulgare seedl... 44 0.012
gb|AW982167.3|AW982167 HVSMEg0002A07f Hordeum vulgare pre-a... 44 0.012
gb|AW983084.3|AW983084 HVSMEg0008A19f Hordeum vulgare pre-a... 44 0.012
gb|BG366603.2|BG366603 HVSMEi0007J14f Hordeum vulgare 20 DA... 44 0.012
gb|BF263468.3|BF263468 HV_CEa0006N05f Hordeum vulgare seedl... 44 0.012
gb|BF267330.3|BF267330 HV_CEa0017J15f Hordeum vulgare seedl... 44 0.012
gb|BF267871.3|BF267871 HV_CEa0019C10f Hordeum vulgare seedl... 44 0.012
gb|BE214775.3|BE214775 HV_CEb0004I22f Hordeum vulgare seedl... 44 0.012
gb|AV923316.1|AV923316 AV923316 K. Sato unpublished cDNA li... 44 0.012
gb|AV925367.1|AV925367 AV925367 K. Sato unpublished cDNA li... 44 0.012
gb|AV925450.1|AV925450 AV925450 K. Sato unpublished cDNA li... 44 0.012
gb|AV926038.1|AV926038 AV926038 K. Sato unpublished cDNA li... 44 0.012
gb|BQ459303.1|BQ459303 HA01J08r HA Hordeum vulgare subsp. v... 44 0.012
gb|BQ461125.1|BQ461125 HE01C14r HE Hordeum vulgare subsp. v... 44 0.012
gb|BQ461183.1|BQ461183 HE01P17r HE Hordeum vulgare subsp. v... 44 0.012
gb|BQ463524.1|BQ463524 HI05J11r HI Hordeum vulgare subsp. v... 44 0.012
gb|BQ467946.1|BQ467946 HR01G22r HR Hordeum vulgare subsp. v... 44 0.012
gb|BQ468245.1|BQ468245 HP01I20T HP Hordeum vulgare subsp. v... 44 0.012
gb|BI780646.2|BI780646 EBes01_SQ001_J21_R embryo sac, 4-6 D... 44 0.012
gb|BM099366.2|BM099366 EBes01_SQ003_A19_R embryo sac, 4-6 D... 44 0.012
gb|BI776795.2|BI776795 EBpi07_SQ001_M11_R pistil, 12 DPA, n... 44 0.012
gb|BI779510.2|BI779510 EBro01_SQ004_E09_R root, 3 week, hyd... 44 0.012
gb|BQ758548.1|BQ758548 EBma07_SQ002_G06_R maternal, 21 DPA,... 44 0.012
gb|BQ761706.1|BQ761706 EBem10_SQ001_I17_R embryo, 2 Day ger... 44 0.012
gb|BQ762884.1|BQ762884 EBro02_SQ006_L12_R root, 3 week, hyd... 44 0.012
gb|BQ765591.1|BQ765591 EBro03_SQ007_J14_R root, 3 week, wat... 44 0.012
gb|BU978904.1|BU978904 HA14J15r HA Hordeum vulgare subsp. v... 44 0.012
gb|BU981968.1|BU981968 HA25C05r HA Hordeum vulgare subsp. v... 44 0.012
gb|BU983515.1|BU983515 HA29P18r HA Hordeum vulgare subsp. v... 44 0.012
gb|BU994485.1|BU994485 HM07D18r HM Hordeum vulgare subsp. v... 44 0.012
gb|BU995865.1|BU995865 HM11J22r HM Hordeum vulgare subsp. v... 44 0.012
gb|CA008155.1|CA008155 HU10A24r HU Hordeum vulgare subsp. v... 44 0.012
gb|BJ544176.1|BJ544176 BJ544176 K. Sato unpublished cDNA li... 44 0.012
gb|BJ544565.1|BJ544565 BJ544565 K. Sato unpublished cDNA li... 44 0.012
gb|CB876930.1|CB876930 HP02O15T HP Hordeum vulgare subsp. v... 44 0.012
gb|CB877848.1|CB877848 HP06G09T HP Hordeum vulgare subsp. v... 44 0.012
gb|CB882520.1|CB882520 HL02B17w HL Hordeum vulgare subsp. v... 44 0.012
gb|CK122803.1|CK122803 BES1824106a06 BES1824 Hordeum vulgar... 44 0.012
emb|AJ234441.1|HVU234441 Hordeum vulgare partial mRNA; clon... 44 0.012
gb|AJ228933.1|AJ228933 AJ228933 Barley leaf, 8 day old seed... 42 0.049
gb|BE421073.1|BE421073 HWM005.E06 ITEC HWM Barley Leaf Libr... 42 0.049
gb|AL502590.1|AL502590 AL502590 Hordeum vulgare Barke roots... 42 0.049
gb|BF621307.2|BF621307 HVSMEa0006G23f Hordeum vulgare seedl... 42 0.049
gb|BF621327.2|BF621327 HVSMEa0006I07f Hordeum vulgare seedl... 42 0.049
gb|BF626036.2|BF626036 HVSMEa0015F23f Hordeum vulgare seedl... 42 0.049
gb|BE194057.1|BE194057 HVSMEh0083L15f Hordeum vulgare 5-45 ... 42 0.049
gb|BF630279.2|BF630279 HVSMEb0008J07f Hordeum vulgare seedl... 42 0.049
gb|BG310052.1|BG310052 HVSMEc0016D09f Hordeum vulgare seedl... 42 0.049
gb|BF257606.2|BF257606 HVSMEf0013F09f Hordeum vulgare seedl... 42 0.049
gb|BF260448.2|BF260448 HVSMEf0022A08f Hordeum vulgare seedl... 42 0.049
gb|BI954952.1|BI954952 HVSMEm0020J16f Hordeum vulgare green... 42 0.049
gb|BE216610.2|BE216610 HV_CEb0010P06f Hordeum vulgare seedl... 42 0.049
gb|BI960213.1|BI960213 HVSMEn0023M03f Hordeum vulgare rachi... 42 0.049
gb|BF253710.3|BF253710 HVSMEf0001O15f Hordeum vulgare seedl... 42 0.049
gb|BG368329.2|BG368329 HVSMEi0017L14f Hordeum vulgare 20 DA... 42 0.049
gb|BG368334.2|BG368334 HVSMEi0017L20f Hordeum vulgare 20 DA... 42 0.049
gb|BG369970.2|BG369970 HVSMEi0026M01f Hordeum vulgare 20 DA... 42 0.049
gb|BF264663.3|BF264663 HV_CEa0010A12f Hordeum vulgare seedl... 42 0.049
gb|BE559114.2|BE559114 HV_CEb0022O20f Hordeum vulgare seedl... 42 0.049
gb|AV926393.1|AV926393 AV926393 K. Sato unpublished cDNA li... 42 0.049
gb|AV927896.1|AV927896 AV927896 K. Sato unpublished cDNA li... 42 0.049
gb|BQ465324.1|BQ465324 HU03E21r HU Hordeum vulgare subsp. v... 42 0.049
gb|BQ465846.1|BQ465846 HU04N17r HU Hordeum vulgare subsp. v... 42 0.049
gb|BQ466063.1|BQ466063 HT01H14T HT Hordeum vulgare subsp. v... 42 0.049
gb|BQ466539.1|BQ466539 HT02N05r HT Hordeum vulgare subsp. v... 42 0.049
gb|BQ471385.1|BQ471385 HV02E13r HV Hordeum vulgare subsp. v... 42 0.049
gb|BQ471538.1|BQ471538 HV02L18r HV Hordeum vulgare subsp. v... 42 0.049
gb|BQ472279.1|BQ472279 HV04O24r HV Hordeum vulgare subsp. v... 42 0.049
gb|BI779374.2|BI779374 EBro01_SQ003_N04_R root, 3 week, hyd... 42 0.049
gb|BI779494.2|BI779494 EBro01_SQ004_D16_R root, 3 week, hyd... 42 0.049
gb|BI777214.2|BI777214 EBro03_SQ002_H09_R root, 3 week, wat... 42 0.049
gb|BI777602.2|BI777602 EBro04_SQ001_L18_R root, 3 week, sal... 42 0.049
gb|BQ760524.1|BQ760524 EBro03_SQ001_C04_R root, 3 week, wat... 42 0.049
gb|BQ760811.1|BQ760811 EBro03_SQ003_I18_R root, 3 week, wat... 42 0.049
gb|BQ760821.1|BQ760821 EBro03_SQ003_J05_R root, 3 week, wat... 42 0.049
gb|BQ764043.1|BQ764043 EBro03_SQ006_J01_R root, 3 week, wat... 42 0.049
gb|BQ766536.1|BQ766536 EBro08_SQ006_J10_R root, 3 week, dro... 42 0.049
gb|BQ768382.1|BQ768382 EBro08_SQ011_E18_R root, 3 week, dro... 42 0.049
gb|BQ768698.1|BQ768698 EBro08_SQ012_N08_R root, 3 week, dro... 42 0.049
gb|CA004487.1|CA004487 HS17M05r HS Hordeum vulgare subsp. v... 42 0.049
gb|CA004590.1|CA004590 HS18B07r HS Hordeum vulgare subsp. v... 42 0.049
gb|CA004768.1|CA004768 HS18K04r HS Hordeum vulgare subsp. v... 42 0.049
gb|CA006566.1|CA006566 HU05A23r HU Hordeum vulgare subsp. v... 42 0.049
gb|CA006879.1|CA006879 HU05P13r HU Hordeum vulgare subsp. v... 42 0.049
gb|CA006923.1|CA006923 HU06B24r HU Hordeum vulgare subsp. v... 42 0.049
gb|CA007957.1|CA007957 HU09H22r HU Hordeum vulgare subsp. v... 42 0.049
gb|CA008771.1|CA008771 HU12A18r HU Hordeum vulgare subsp. v... 42 0.049
gb|CA011781.1|CA011781 HT03I11r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA011830.1|CA011830 HT03K18r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA012204.1|CA012204 HT04M05r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA012271.1|CA012271 HT04P05r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA012660.1|CA012660 HT06A24r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA012790.1|CA012790 HT06H04r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA013498.1|CA013498 HT08K11r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA013893.1|CA013893 HT09M17r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA013921.1|CA013921 HT09N11r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA014171.1|CA014171 HT10J10r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA014417.1|CA014417 HT11E16r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA015159.1|CA015159 HT13H11r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA015354.1|CA015354 HT14A21r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA015430.1|CA015430 HT14E17r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA015506.1|CA015506 HT14I06r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA015595.1|CA015595 HT14M20r HT Hordeum vulgare subsp. v... 42 0.049
gb|CA017296.1|CA017296 HV12P04u HV Hordeum vulgare subsp. v... 42 0.049
gb|CA017736.1|CA017736 HV06B12r HV Hordeum vulgare subsp. v... 42 0.049
gb|CA018797.1|CA018797 HV09K24r HV Hordeum vulgare subsp. v... 42 0.049
gb|CA019215.1|CA019215 HV11E04r HV Hordeum vulgare subsp. v... 42 0.049
gb|CA019604.1|CA019604 HV12I09r HV Hordeum vulgare subsp. v... 42 0.049
gb|CA019733.1|CA019733 HV12P04r HV Hordeum vulgare subsp. v... 42 0.049
gb|CA020055.1|CA020055 HV14D07r HV Hordeum vulgare subsp. v... 42 0.049
gb|CA027879.1|CA027879 HZ60F01r HZ Hordeum vulgare subsp. v... 42 0.049
gb|CB877065.1|CB877065 HP03H03T HP Hordeum vulgare subsp. v... 42 0.049
gb|CB879728.1|CB879728 HP03H03w HP Hordeum vulgare subsp. v... 42 0.049
gb|AL507901.1|AL507901 AL507901 Hordeum vulgare Barke devel... 40 0.19
gb|AL509033.1|AL509033 AL509033 Hordeum vulgare Barke devel... 40 0.19
gb|BF629879.2|BF629879 HVSMEb0007D04f Hordeum vulgare seedl... 40 0.19
gb|BF260936.2|BF260936 HVSMEf0023F08f Hordeum vulgare seedl... 40 0.19
gb|BE194557.2|BE194557 HVSMEh0086A06f Hordeum vulgare 5-45 ... 40 0.19
gb|BI947764.1|BI947764 HVSMEl0006M23f Hordeum vulgare spike... 40 0.19
gb|BI951800.1|BI951800 HVSMEm0002P02f Hordeum vulgare green... 40 0.19
gb|BI951905.1|BI951905 HVSMEm0003K14f Hordeum vulgare green... 40 0.19
gb|BI953803.1|BI953803 HVSMEm0014I19f Hordeum vulgare green... 40 0.19
gb|BE214929.1|BE214929 HV_CEb0005D11f Hordeum vulgare seedl... 40 0.19
gb|BF263948.2|BF263948 HV_CEa0008C02f Hordeum vulgare seedl... 40 0.19
gb|BF267038.2|BF267038 HV_CEa0016M07f Hordeum vulgare seedl... 40 0.19
gb|BF066011.2|BF066011 HV_CEb0014J14f Hordeum vulgare seedl... 40 0.19
gb|BG417029.1|BG417029 HVSMEk0015M03f Hordeum vulgare testa... 40 0.19
gb|BF256962.3|BF256962 HVSMEf0011H20f Hordeum vulgare seedl... 40 0.19
gb|BG344369.2|BG344369 HVSMEg0009B05f Hordeum vulgare pre-a... 40 0.19
gb|BJ466505.1|BJ466505 BJ466505 K. Sato unpublished cDNA li... 40 0.19
gb|BQ468074.1|BQ468074 HR01N23r HR Hordeum vulgare subsp. v... 40 0.19
gb|BM441989.2|BM441989 EBan01_SQ001_H04_R anther, yellow st... 40 0.19
gb|BI779458.2|BI779458 EBro01_SQ004_B16_R root, 3 week, hyd... 40 0.19
gb|BM442868.2|BM442868 EBro02_SQ001_K04_R root, 3 week, hyd... 40 0.19
gb|BM370575.2|BM370575 EBro08_SQ004_K06_R root, 3 week, dro... 40 0.19
gb|BQ763802.1|BQ763802 EBro03_SQ005_O11_R root, 3 week, wat... 40 0.19
gb|BU969487.1|BU969487 HB11K17r BC Hordeum vulgare subsp. v... 40 0.19
gb|BU990295.1|BU990295 HF24J20r HF Hordeum vulgare subsp. v... 40 0.19
gb|CA004325.1|CA004325 HS17E03r HS Hordeum vulgare subsp. v... 40 0.19
gb|CA006864.1|CA006864 HU05O18r HU Hordeum vulgare subsp. v... 40 0.19
gb|CA012370.1|CA012370 HT05D22r HT Hordeum vulgare subsp. v... 40 0.19
gb|CA013495.1|CA013495 HT08K08r HT Hordeum vulgare subsp. v... 40 0.19
gb|CA014052.1|CA014052 HT10E02r HT Hordeum vulgare subsp. v... 40 0.19
gb|CA028704.1|CA028704 HZ63A06r HZ Hordeum vulgare subsp. v... 40 0.19
gb|CV054844.1|CV054844 BNEL113h8 Barley EST endosperm libra... 40 0.19
gb|CV063982.1|CV063982 BNEL96a7 Barley EST endosperm librar... 40 0.19
>gb|BM817184.1|BM817184 HC109E09_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109E09_T3.ab1 similar to Peroxidase,, mRNA sequence
Length = 864
Score = 416 bits (210), Expect = e-115
Identities = 506/604 (83%), Gaps = 2/604 (0%)
Strand = Plus / Plus
Query: 143 tgccaggccagcccttactaccctctggagctagggtactaccgttacacttgtccccag 202
|||||||||||||||| || || |||||| | |||| ||||| ||| || |||||
Sbjct: 166 tgccaggccagccctttctggccactggaggtcgggttctaccacgacaagtgcccccaa 225
Query: 203 gccgaggctatcgtcaaggccagcatggagaaggccatcgctcagaaccctggcaatggc 262
|| ||||| ||||||||||| |||||||||||||||| | |||||||| |||||||||
Sbjct: 226 gcggaggccgtcgtcaaggccgtcatggagaaggccatctcccagaaccccggcaatggc 285
Query: 263 gccgccgtcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgcttccgtg 322
|||||| | ||||||||||||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 286 gccgccatgatccgcatgctcttccacgactgtttcgttgagggttgcgatgcttccgtc 345
Query: 323 cttctcgacccgaccccgttcagcccgacgccggagaagctggccgcacccaacaacccg 382
|| || ||||||||||||||||||||||||||||||||||| | | || ||| ||||
Sbjct: 346 ctcctggacccgaccccgttcagcccgacgccggagaagctcagcccgccgaacgaccct 405
Query: 383 agcctgcgcgggttcgagctgatcgacgccatcaaggacgccctcgaggccgcgtgcccc 442
||||||||| || |||||||| |||||||||||||||||| |||||||||| |||||
Sbjct: 406 tccctgcgcggctttgagctgattgacgccatcaaggacgccgtcgaggccgcctgcccg 465
Query: 443 ggggtcgtctcctgcgccgacatcatcgccttcgcggcgcgcgacgcgtcctgcttcctg 502
||||||||||||||||| |||||| ||||||||||||| || || ||||||||| ||||
Sbjct: 466 ggggtcgtctcctgcgcagacatcgtcgccttcgcggcccgtgatgcgtcctgcatcctc 525
Query: 503 agccagggcaaggtctccttcgacatgccgtcgggccgcctcgacggcaccttctccaac 562
||| ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 526 agcaggggcaaggtaaacttcgacatgccgtccggccgccgcgacggcaccttctccaac 585
Query: 563 gcctccgagtcggtcaagttcctcgtcccgcccacgtccaacctcagcgacctcgcctcc 622
||||||||| || ||| |||||| ||||| || ||||||||| |||| |||| |
Sbjct: 586 gcctccgagccgctcaggttcctggtcccaccggattccaacctcggcgagctcgtcgat 645
Query: 623 agcttcgccgtcaagggcat-gtcgctggaggacctggtcgtcctctccggcgcgcacac 681
||||||| ||||||||| | ||| |||||||||||| |||||||||||||||||||
Sbjct: 646 agcttcgtggtcaagggcctcaacgc-cgaggacctggtcatcctctccggcgcgcacac 704
Query: 682 cgtcggccgctcccactgctcctccttcggctccgaccgcctcgacggcccctccgacat 741
| |||| ||||||||||||| || ||||| ||||||| ||| ||| || || ||||||
Sbjct: 705 catcgggcgctcccactgctnctncttcgtnnccgaccgnctcaacgcccncttcgacat 764
Query: 742 caac 745
||||
Sbjct: 765 caac 768
>gb|BQ763481.1|BQ763481 EBro02_SQ008_C18_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_C18 5', mRNA sequence
Length = 678
Score = 398 bits (201), Expect = e-109
Identities = 504/604 (83%), Gaps = 1/604 (0%)
Strand = Plus / Plus
Query: 142 gtgccaggccagcccttactaccctctggagctagggtactaccgttacacttgtcccca 201
||||||||||||||||| || || |||||| | || ||||||| ||| || |||||
Sbjct: 53 gtgccaggccagccctttctggccactggagatgggctactaccacgacaagtgccccca 112
Query: 202 ggccgaggctatcgtcaaggccagcatggagaaggccatcgctcagaaccctggcaatgg 261
||| ||||| |||||||||| | |||||||||||||||| |||||||| ||||||||
Sbjct: 113 ggcagaggccatcgtcaagggcgtcatggagaaggccatcttccagaaccccggcaatgg 172
Query: 262 cgccgccgtcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgcttccgt 321
||| ||| | ||||||||||||||||| ||||| |||||||||||||| || ||||| ||
Sbjct: 173 cgctgccatgatccgcatgctcttccacgactgtttcgtcgagggctgtgatgcttctgt 232
Query: 322 gcttctcgacccgaccccgttcagcccgacgccggagaagctggccgcacccaacaaccc 381
|| || ||||||||||||||||||||||||||||||||||| | | || ||| ||||
Sbjct: 233 cctcctggacccgaccccgttcagcccgacgccggagaagctcagcccgccgaacgaccc 292
Query: 382 gagcctgcgcgggttcgagctgatcgacgccatcaaggacgccctcgaggccgcgtgccc 441
| |||||||| ||||||||||| || || |||||||||||||||||||| || |||||
Sbjct: 293 tactctgcgcggcttcgagctgattgatgcgatcaaggacgccctcgaggcggcctgccc 352
Query: 442 cggggtcgtctcctgcgccgacatcatcgccttcgcggcgcgcgacgcgtcctgcttcct 501
|| ||||||||||| || |||||| ||||||||||||| || |||||||||| | ||||
Sbjct: 353 gggcgtcgtctcctgtgcagacatcgtcgccttcgcggcccgtgacgcgtcctccatcct 412
Query: 502 gagccagggcaaggtctccttcgacatgccgtcgggccgcctcgacggcaccttctccaa 561
||| ||||||||| ||| || |||||||| ||||||| ||||||||||||||||||
Sbjct: 413 cagcaggggcaaggtaaactttgagatgccgtccggccgccgcgacggcaccttctccaa 472
Query: 562 cgcctccgagtcggtcaagttcctcgtcccgcccacgtccaacctcagcgacctcgcctc 621
|||||||||| || |||||||||| |||||||| |||||||||||||||||||||| | |
Sbjct: 473 cgcctccgagccgctcaagttcctggtcccgccgacgtccaacctcagcgacctcgtcgc 532
Query: 622 cagcttcgccgtcaagggcatgtcgctggaggacctggtcgtcctctccggcgcgcacac 681
|||||| | | |||||||| | ||||||||||||| |||||||||| ||||||||
Sbjct: 533 cagctttgtcatcaagggcctcaacacggaggacctggtcatcctctccggtgcgcacac 592
Query: 682 c-gtcggccgctcccactgctcctccttcggctccgaccgcctcgacggcccctccgaca 740
| | || || ||||||||||| | ||| | ||| || |||||| || |||||||||||
Sbjct: 593 catttgggcgttcccactgctcgtnctttgtctctgatcgcctcaacaccccctccgaca 652
Query: 741 tcaa 744
||||
Sbjct: 653 tcaa 656
>gb|BM370411.2|BM370411 EBro08_SQ004_C11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_C11 5', mRNA sequence
Length = 598
Score = 369 bits (186), Expect = e-100
Identities = 383/449 (85%)
Strand = Plus / Plus
Query: 143 tgccaggccagcccttactaccctctggagctagggtactaccgttacacttgtccccag 202
|||||||||||||||| || || |||||| | |||| ||||| ||| || |||||
Sbjct: 116 tgccaggccagccctttctggccactggaggtcgggttctaccacgacaagtgcccccaa 175
Query: 203 gccgaggctatcgtcaaggccagcatggagaaggccatcgctcagaaccctggcaatggc 262
|| ||||| ||||||||||| |||||||||||||||| | |||||||| |||||||||
Sbjct: 176 gcggaggccgtcgtcaaggccgtcatggagaaggccatctcccagaaccccggcaatggc 235
Query: 263 gccgccgtcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgcttccgtg 322
|||||| | ||||||||||||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 236 gccgccatgatccgcatgctcttccacgactgtttcgttgagggttgcgatgcttccgtc 295
Query: 323 cttctcgacccgaccccgttcagcccgacgccggagaagctggccgcacccaacaacccg 382
|| || ||||||||||||||||||||||||||||||||||| | | || ||| ||||
Sbjct: 296 ctcctggacccgaccccgttcagcccgacgccggagaagctcagcccgccgaacgaccct 355
Query: 383 agcctgcgcgggttcgagctgatcgacgccatcaaggacgccctcgaggccgcgtgcccc 442
||||||||| || |||||||| |||||||||||||||||| |||||||||| |||||
Sbjct: 356 tccctgcgcggctttgagctgattgacgccatcaaggacgccgtcgaggccgcctgcccg 415
Query: 443 ggggtcgtctcctgcgccgacatcatcgccttcgcggcgcgcgacgcgtcctgcttcctg 502
||||||||||||||||| |||||| ||||||||||||| || || ||||||||| ||||
Sbjct: 416 ggggtcgtctcctgcgcagacatcgtcgccttcgcggcccgtgatgcgtcctgcatcctc 475
Query: 503 agccagggcaaggtctccttcgacatgccgtcgggccgcctcgacggcaccttctccaac 562
||| ||||||||| |||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 476 agcaggggcaaggtaaacttcnacatgccgtccggccgccgcgacggcaccttctccaac 535
Query: 563 gcctccgagtcggtcaagttcctcgtccc 591
||||||||| || |||||||||| |||||
Sbjct: 536 gcctccgagccgctcaagttcctggtccc 564
>gb|BQ763726.1|BQ763726 EBro03_SQ005_B10_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_B10 5', mRNA sequence
Length = 699
Score = 301 bits (152), Expect = 3e-080
Identities = 376/448 (83%), Gaps = 2/448 (0%)
Strand = Plus / Plus
Query: 299 gtcgagggctgcgacgcttccgtgcttctcgacccgaccccgttcagcccgacgccggag 358
||||||||||| |||||||| || || || || || ||||||||||||||||||||||||
Sbjct: 1 gtcgagggctgtgacgcttcggttctcctggatcctaccccgttcagcccgacgccggag 60
Query: 359 aagctggccgcacccaacaacccgagcctgcgcgggttcgagctgatcgacgccatcaag 418
||||| | | || ||||||||| |||||||| || ||||||||||||||||| ||
Sbjct: 61 aagctcagcccgccaaacaacccgtcgctgcgcggctttgagctgatcgacgccattaaa 120
Query: 419 gacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgccttcgcg 478
|| ||||| |||| || || || || ||| |||||||| ||||||||||||||||||
Sbjct: 121 gaagcccttgaggtggcctgtccgggcaccgtgtcctgcgcggacatcatcgccttcgcg 180
Query: 479 gcgcgcgacgcgtcctgcttcctgagccagggcaaggtctccttcgacatgccgtcgggc 538
|| ||||| ||||||||| |||| ||| |||||||| |||||| |||| ||||||
Sbjct: 181 gcccgcgatgcgtcctgcatcctcagcgccggcaaggtacacttcgaggtgccatcgggc 240
Query: 539 cgcctcgacggcaccttctccaacgcctccgagtcggtcaagttcctcgtcccgcccacg 598
|||| ||||||||||||||||||||||||||| | ||||||| |||| ||||||||||
Sbjct: 241 cgccgtgacggcaccttctccaacgcctccgagcccctcaagtttctcgccccgcccacg 300
Query: 599 tccaacctcagcgacctcgcctccagcttcgccgtcaagggcat-gtcgctggaggacct 657
||||||||||||||||||| | ||||||| |||||||||| | | ||| |||||||||
Sbjct: 301 tccaacctcagcgacctcgtcgatagcttcgtcgtcaagggcctggacgc-ggaggacct 359
Query: 658 ggtcgtcctctccggcgcgcacaccgtcggccgctcccactgctcctccttcggctccga 717
|||| |||||||||| ||||||||| |||| |||||||||||||||||||| | | ||
Sbjct: 360 ggtcatcctctccggagcgcacaccatcggtcgctcccactgctcctcctttgtgcctga 419
Query: 718 ccgcctcgacggcccctccgacatcaac 745
||||||| ||| ||||||||||||||||
Sbjct: 420 ccgcctcaacgccccctccgacatcaac 447
Score = 172 bits (87), Expect = 2e-041
Identities = 159/183 (86%)
Strand = Plus / Plus
Query: 803 gaccccaccgtgatgcaggacgtggtcacgcccaacgccatggacaaccagtactacaag 862
|||||||| ||||||||||||||||| || || || | | |||||| ||||||||||||
Sbjct: 508 gaccccacagtgatgcaggacgtggtgaccccgaatgacctggacaggcagtactacaag 567
Query: 863 aacgtgctctcgcacaccgtgctcttcacctccgacgccgcgctcctcacgtcgccggag 922
|||||||| |||||||| |||||||||||||||||||| |||||||| || || ||||
Sbjct: 568 aacgtgctgtcgcacacggtgctcttcacctccgacgcggcgctcctgacctccgaggag 627
Query: 923 acggccaagttggtgctggacaacgccaagatccccgggtggtgggaggacaagttcgag 982
||||| | | ||||| ||||||||||||| |||||||| ||||||||||||| |||||||
Sbjct: 628 acggcgaggatggtggtggacaacgccaacatccccggatggtgggaggacaggttcgag 687
Query: 983 aag 985
|||
Sbjct: 688 aag 690
>gb|BF267768.2|BF267768 HV_CEa0018N11f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018N11f, mRNA sequence
Length = 849
Score = 281 bits (142), Expect = 3e-074
Identities = 334/398 (83%)
Strand = Plus / Plus
Query: 143 tgccaggccagcccttactaccctctggagctagggtactaccgttacacttgtccccag 202
|||||||||||||||| || || |||||| | |||| ||||| ||| || |||||
Sbjct: 125 tgccaggccagccctttctggccactggaggtcgggttctaccacgacaagtgcccccaa 184
Query: 203 gccgaggctatcgtcaaggccagcatggagaaggccatcgctcagaaccctggcaatggc 262
|| ||||| ||||||||||| |||||||||||||||| | |||||||| |||||||||
Sbjct: 185 gcggaggccgtcgtcaaggccgtcatggagaaggccatctcccagaaccccggcaatggc 244
Query: 263 gccgccgtcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgcttccgtg 322
|||||| | ||||||||||||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 245 gccgccatgatccgcatgctcttccacgactgtttcgttgagggttgcgatgcttccgtc 304
Query: 323 cttctcgacccgaccccgttcagcccgacgccggagaagctggccgcacccaacaacccg 382
|| || ||||||||||||||||||||||||||||||||||| | | || ||| ||||
Sbjct: 305 ctcctggacccgaccccgttcagcccgacgccggagaagctcagcccgccgaacgaccct 364
Query: 383 agcctgcgcgggttcgagctgatcgacgccatcaaggacgccctcgaggccgcgtgcccc 442
||||||||| || |||||||| |||||||||||||||||| |||||||||| |||||
Sbjct: 365 tccctgcgcggctttgagctgattgacgccatcaaggacgccgtcgaggccgcctgcccg 424
Query: 443 ggggtcgtctcctgcgccgacatcatcgccttcgcggcgcgcgacgcgtcctgcttcctg 502
||||||||||||||||| |||||| || |||||||||| || || ||||||||| | ||
Sbjct: 425 ggggtcgtctcctgcgcagacatcgtccccttcgcggcccgtgatgcgtcctgcatactc 484
Query: 503 agccagggcaaggtctccttcgacatgccgtcgggccg 540
||| |||||||| ||||||||||||||| |||||
Sbjct: 485 agcaggggcaagggaaacttcgacatgccgtccggccg 522
>gb|BF267814.2|BF267814 HV_CEa0018P11f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018P11f, mRNA sequence
Length = 880
Score = 258 bits (130), Expect = 4e-067
Identities = 336/402 (83%), Gaps = 2/402 (0%)
Strand = Plus / Plus
Query: 143 tgccaggccagcccttactaccctctggagctagggtactaccgttacacttgtccccag 202
|||||||||||||||| || || |||||| | |||| ||||| ||| || |||||
Sbjct: 126 tgccaggccagccctttctggccactggaggtcgggttctaccacgacaagtgcccccaa 185
Query: 203 gccgaggctatcgtcaaggccagcatggagaaggccatcgctcagaaccctggcaatggc 262
|| ||||| ||||||||||| |||||||||||||||| | |||||||| |||||||||
Sbjct: 186 gcggaggccgtcgtcaaggccgtcatggagaaggccatctcccagaaccccggcaatggc 245
Query: 263 gccgccgtcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgcttccgtg 322
|||||| | ||||||||||||||||| ||||| ||||| ||||| ||||| |||| |||
Sbjct: 246 gccgccatgatccgcatgctcttccacgactgtttcgttgagggttgcgatgcttacgtc 305
Query: 323 cttctcgacccgaccccgttcagcccgacgccggagaagctggccgcacccaacaacccg 382
|| || ||||||||||||||||||||||||||||||||||| | | || ||| ||||
Sbjct: 306 ctcctggacccgaccccgttcagcccgacgccggagaagctcagcccgccgaacgaccct 365
Query: 383 agcctgcgcgggttcgagctgatcgacgccatcaaggacgccctcgaggccgcgtgcccc 442
||||||||| || |||||||| |||||||||||||||||| |||||||||| |||||
Sbjct: 366 tccctgcgcggctttgagctgattgacgccatcaaggacgccgtcgaggccgcctgcccg 425
Query: 443 gggg-tcgtctcctgcgccgacatcatcgccttcgcggcgc-gcgacgcgtcctgcttcc 500
|||| ||||||||||||| ||||||||||||||||||| | | || ||||||||| |||
Sbjct: 426 ggggttcgtctcctgcgcaaacatcatcgccttcgcggcccagtgatgcgtcctgcatcc 485
Query: 501 tgagccagggcaaggtctccttcgacatgccgtcgggccgcc 542
| | | ||||||| || |||| |||||||||| |||||||
Sbjct: 486 tcatcaagggcaaagttaacttcaacatgccgtccggccgcc 527
>gb|BQ763953.1|BQ763953 EBro03_SQ005_J19_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_J19 5', mRNA sequence
Length = 669
Score = 232 bits (117), Expect = 3e-059
Identities = 216/249 (86%)
Strand = Plus / Plus
Query: 803 gaccccaccgtgatgcaggacgtggtcacgcccaacgccatggacaaccagtactacaag 862
|||||||| ||||||||||||||||| || || || | | |||||| ||||||||||||
Sbjct: 150 gaccccacagtgatgcaggacgtggtgaccccgaatgacctggacaggcagtactacaag 209
Query: 863 aacgtgctctcgcacaccgtgctcttcacctccgacgccgcgctcctcacgtcgccggag 922
|||||||| |||||||| |||||||||||||||||||| |||||||| || || ||||
Sbjct: 210 aacgtgctgtcgcacacggtgctcttcacctccgacgcggcgctcctgacctccgaggag 269
Query: 923 acggccaagttggtgctggacaacgccaagatccccgggtggtgggaggacaagttcgag 982
||||| | | ||||| ||||||||||||| |||||||| ||||||||||||| |||||||
Sbjct: 270 acggcgaggatggtggtggacaacgccaacatccccggatggtgggaggacaggttcgag 329
Query: 983 aaggccatggtcaagatggccagcctcgaagtcaagactgggcaccaaggacaggtcagg 1042
||||||||||| ||||||||| || |||| |||||||| || |||| |||||| |||||
Sbjct: 330 aaggccatggtgaagatggccggcatcgaggtcaagaccggtgaccagggacagatcagg 389
Query: 1043 aagaactgc 1051
|||||||||
Sbjct: 390 aagaactgc 398
Score = 71.9 bits (36), Expect = 5e-011
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 674 gcgcacaccgtcggccgctcccactgctcctccttcggctccgaccgcctcgacggcccc 733
||||||||| |||| |||||||||||||||||||| | | ||||||||| ||| ||||
Sbjct: 18 gcgcacaccatcggtcgctcccactgctcctcctttgtgcctgaccgcctcaacgccccc 77
Query: 734 tccgacatcaac 745
||||||||||||
Sbjct: 78 tccgacatcaac 89
>gb|BM442793.2|BM442793 EBro02_SQ001_E08_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_E08 5', mRNA sequence
Length = 532
Score = 228 bits (115), Expect = 4e-058
Identities = 232/271 (85%)
Strand = Plus / Plus
Query: 801 acgaccccaccgtgatgcaggacgtggtcacgcccaacgccatggacaaccagtactaca 860
||||||| || ||||||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 156 acgacccgacggtgatgcaggacgtggtgacgcccaacaagctggacaggcagtactaca 215
Query: 861 agaacgtgctctcgcacaccgtgctcttcacctccgacgccgcgctcctcacgtcgccgg 920
|||| ||||| |||||||| |||||||||||||||||||| |||||| | |||||| |||
Sbjct: 216 agaatgtgctgtcgcacacggtgctcttcacctccgacgcggcgctcatgacgtcggcgg 275
Query: 921 agacggccaagttggtgctggacaacgccaagatccccgggtggtgggaggacaagttcg 980
|||| || | ||||| |||| |||||||| |||||||||||||||||||||| |||||
Sbjct: 276 agacagcgagtatggtggtggagaacgccaaaatccccgggtggtgggaggacaggttcg 335
Query: 981 agaaggccatggtcaagatggccagcctcgaagtcaagactgggcaccaaggacaggtca 1040
||||||||||||| ||||||||| || |||| |||||||| || |||| || ||| |||
Sbjct: 336 agaaggccatggtgaagatggccggcatcgaggtcaagaccggctaccagggccagatca 395
Query: 1041 ggaagaactgcagggcgatcaatcactacta 1071
||||||||||| | || ||||| ||||||||
Sbjct: 396 ggaagaactgccgcgcaatcaaccactacta 426
Score = 79.8 bits (40), Expect = 2e-013
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 649 ggaggacctggtcgtcctctccggcgcgcacaccgtcggccgctcccactgctcctcctt 708
||||||||||||| |||||||||| ||||||||| | || || ||||||||||| |||||
Sbjct: 1 ggaggacctggtcatcctctccggtgcgcacaccattgggcgttcccactgctcgtcctt 60
Query: 709 cggctccgaccgcctcgacggcccctccgacatcaa 744
| ||| || |||||| || |||||||||||||||
Sbjct: 61 tgtctctgatcgcctcaacaccccctccgacatcaa 96
>gb|BQ662082.1|BQ662082 HR01H14u HR Hordeum vulgare subsp. vulgare cDNA clone HR01H14
3-PRIME, mRNA sequence
Length = 421
Score = 194 bits (98), Expect = 5e-048
Identities = 173/198 (87%)
Strand = Plus / Minus
Query: 854 tactacaagaacgtgctctcgcacaccgtgctcttcacctccgacgccgcgctcctcacg 913
||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 391 tactacaagaacgtgctgtcgcacacggtgctcttcacctccgacgcggcgctcctgacc 332
Query: 914 tcgccggagacggccaagttggtgctggacaacgccaagatccccgggtggtgggaggac 973
|| ||||||||| | | ||||| ||||||||||||| |||||||| ||||||||||||
Sbjct: 331 tccgaggagacggcgaggatggtggtggacaacgccaacatccccggatggtgggaggac 272
Query: 974 aagttcgagaaggccatggtcaagatggccagcctcgaagtcaagactgggcaccaagga 1033
| |||||||||||||||||| || |||||| || |||| |||||||| || |||| |||
Sbjct: 271 aggttcgagaaggccatggtgaatatggccggcatcgaggtcaagaccggtgaccaggga 212
Query: 1034 caggtcaggaagaactgc 1051
||| ||||||||||||||
Sbjct: 211 cagatcaggaagaactgc 194
>gb|BF258927.2|BF258927 HVSMEf0017B11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017B11f, mRNA sequence
Length = 805
Score = 186 bits (94), Expect = 1e-045
Identities = 268/322 (83%), Gaps = 3/322 (0%)
Strand = Plus / Plus
Query: 213 tcgtcaaggccagcatggagaaggccatcgctcagaaccctggcaatggcgccgccgtca 272
||||||||| | |||||||||||||||| |||||||| ||||||||||| ||| | |
Sbjct: 170 tcgtcaagggcgtcatggagaaggccatcttccagaaccccggcaatggcgctgccatga 229
Query: 273 tccgcatgctcttccatgactgcttcgtcgagggctgcgacgcttccgtgcttctcgacc 332
|||||||||||||||| ||||| |||||||||||||| || ||||| || || || ||||
Sbjct: 230 tccgcatgctcttccacgactgtttcgtcgagggctgtgatgcttctgtcctcctggacc 289
Query: 333 cgaccccgttcagcccgacgccggagaagctggccgcacccaacaacccgagcctgcgcg 392
||||||||||||||||||||||||||||||| | | || ||| |||| | |||||||
Sbjct: 290 cgaccccgttcagcccgacgccggagaagctcaacccgccgaacgaccctactctgcgcg 349
Query: 393 ggttcgagctgatcgacgccatcaaggacgccctcgaggccgcgtgccccggggtcgtct 452
| ||||| ||||| ||||| |||||||||| |||||| || || ||||| || |||||||
Sbjct: 350 gcttcgaactgattgacgcgatcaaggacgtcctcgaagcggcttgcccgggcgtcgtct 409
Query: 453 cctgcgccg-acatcatcgccttcgc-ggcgcgcgacgcgtcctgcttcctgagccaggg 510
|||| || | ||||| ||||||||| ||| || |||||||||||| |||| ||| |||
Sbjct: 410 cctgtgcagaacatc-gcgccttcgcgggcccgtgacgcgtcctgcatcctcagcagggg 468
Query: 511 caaggtctccttcgacatgccg 532
||||| |||||||||||||
Sbjct: 469 caaggggaacttcgacatgccg 490
Score = 73.8 bits (37), Expect = 1e-011
Identities = 106/129 (82%)
Strand = Plus / Plus
Query: 596 acgtccaacctcagcgacctcgcctccagcttcgccgtcaagggcatgtcgctggaggac 655
|||||||||||||||||||||| | ||||||| | | |||||||| | |||||||
Sbjct: 491 acgtccaacctcagcgacctcgtcgccagctttggcatcaagggcctcaacacggaggac 550
Query: 656 ctggtcgtcctctccggcgcgcacaccgtcggccgctcccactgctcctccttcggctcc 715
|||| | | || ||||| |||||||| | ||||||||||||||||| ||||||||||
Sbjct: 551 ctgggcatactttccgggccgcacaccatgggccgctcccactgctcgtccttcggcttt 610
Query: 716 gaccgcctc 724
|||||||||
Sbjct: 611 gaccgcctc 619
>gb|BQ767861.1|BQ767861 EBro08_SQ010_E03_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_E03 5', mRNA sequence
Length = 526
Score = 184 bits (93), Expect = 5e-045
Identities = 190/221 (85%), Gaps = 1/221 (0%)
Strand = Plus / Plus
Query: 851 cagtactacaagaacgtgctctcgcacaccgtgctcttcacctccgacgccgcgctcctc 910
|||||||||||||| ||||| || ||||| |||||||||||||||||||| |||||| |
Sbjct: 8 cagtactacaagaatgtgctgtc-cacacggtgctcttcacctccgacgcggcgctcatg 66
Query: 911 acgtcgccggagacggccaagttggtgctggacaacgccaagatccccgggtggtgggag 970
|||||| ||||||| || | ||||| |||| |||||||| ||||||||||||||||||
Sbjct: 67 acgtcggcggagacagcgagtatggtggtggagaacgccaaaatccccgggtggtgggag 126
Query: 971 gacaagttcgagaaggccatggtcaagatggccagcctcgaagtcaagactgggcaccaa 1030
|||| |||||||||||||||||| ||||||||| || |||| |||||||| || ||||
Sbjct: 127 gacaggttcgagaaggccatggtgaagatggccggcatcgaggtcaagaccggctaccag 186
Query: 1031 ggacaggtcaggaagaactgcagggcgatcaatcactacta 1071
|| ||| |||||||||||||| | || ||||| ||||||||
Sbjct: 187 ggccagatcaggaagaactgccgcgcaatcaaccactacta 227
>gb|BF258593.2|BF258593 HVSMEf0016C14f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0016C14f, mRNA sequence
Length = 888
Score = 178 bits (90), Expect = 3e-043
Identities = 201/238 (84%)
Strand = Plus / Plus
Query: 270 tcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgcttccgtgcttctcg 329
||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| || |
Sbjct: 81 tcatccgcatgctcttccacgactgcttcgtggagggctgcgacgcctccgtgctgctgg 140
Query: 330 acccgaccccgttcagcccgacgccggagaagctggccgcacccaacaacccgagcctgc 389
||||||| || | |||| ||| |||||||||| || || |||||||| ||||| |
Sbjct: 141 acccgacggcggcgaacccgcagccagagaagctgggggcgcctaacaaccccagccttc 200
Query: 390 gcgggttcgagctgatcgacgccatcaaggacgccctcgaggccgcgtgccccggggtcg 449
| || |||||| |||||||||| ||||| |||| ||||| ||| ||||| || ||||
Sbjct: 201 ggggcttcgaggtgatcgacgcggccaagggcgccgtcgagcgcgcctgccctggcgtcg 260
Query: 450 tctcctgcgccgacatcatcgccttcgcggcgcgcgacgcgtcctgcttcctgagcca 507
||||||||||||||||| ||||||||||||| ||||||||||||| | ||||||||||
Sbjct: 261 tctcctgcgccgacatcgtcgccttcgcggcccgcgacgcgtcctacctcctgagcca 318
Score = 63.9 bits (32), Expect = 1e-008
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 650 gaggacctggtcgtcctctccggcgcgcacaccgtcggccgctcccactgctcctccttc 709
|||||| |||| || |||||||| |||||| || ||||||| |||||||||||||||||
Sbjct: 461 gaggacatggtggtgctctccggggcgcactccatcggccggtcccactgctcctccttt 520
Query: 710 ggctccgaccgcctcg 725
| | | ||||||||||
Sbjct: 521 gtcccggaccgcctcg 536
>gb|BQ766290.1|BQ766290 EBro08_SQ005_F15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_F15 5', mRNA sequence
Length = 476
Score = 172 bits (87), Expect = 2e-041
Identities = 165/191 (86%)
Strand = Plus / Plus
Query: 881 gtgctcttcacctccgacgccgcgctcctcacgtcgccggagacggccaagttggtgctg 940
|||||||||||||||||||| |||||| | |||||| |||||||||| | ||||| ||
Sbjct: 1 gtgctcttcacctccgacgcggcgctcatgacgtcggcggagacggcgagaatggtggtg 60
Query: 941 gacaacgccaagatccccgggtggtgggaggacaagttcgagaaggccatggtcaagatg 1000
|| |||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 61 gagaacgccaaaatccccgggtggtgggaggacaggttcgagaaggccatggtgaagatg 120
Query: 1001 gccagcctcgaagtcaagactgggcaccaaggacaggtcaggaagaactgcagggcgatc 1060
||| || |||| |||||||| || |||| || ||| |||||||||||||| | || |||
Sbjct: 121 gccggcatcgaggtcaagaccggctaccagggccagatcaggaagaactgccgcgcaatc 180
Query: 1061 aatcactacta 1071
|| ||||||||
Sbjct: 181 aaccactacta 191
>gb|BQ467960.1|BQ467960 HR01H14r HR Hordeum vulgare subsp. vulgare cDNA clone HR01H14
5-PRIME, mRNA sequence
Length = 424
Score = 155 bits (78), Expect = 5e-036
Identities = 183/218 (83%)
Strand = Plus / Plus
Query: 197 ccccaggccgaggctatcgtcaaggccagcatggagaaggccatcgctcagaaccctggc 256
|||||||| ||||| ||||||||| | |||| | |||||||| | |||||||| |||
Sbjct: 193 ccccaggcggaggccgtcgtcaagggcgtcatgatggaggccatctcccagaaccccggc 252
Query: 257 aatggcgccgccgtcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgct 316
|||||||||||| | ||||| ||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 253 aatggcgccgccatgatccgaatgctcttccacgactgtttcgtcgagggctgtgacgct 312
Query: 317 tccgtgcttctcgacccgaccccgttcagcccgacgccggagaagctggccgcacccaac 376
|| || || || || || ||||||||||||||||||||||||||||| | | || |||
Sbjct: 313 tcggttctcctggatcctaccccgttcagcccgacgccggagaagctcagcccgccaaac 372
Query: 377 aacccgagcctgcgcgggttcgagctgatcgacgccat 414
|||||| |||||||| || |||||||||||||||||
Sbjct: 373 aacccgtcgctgcgcggctttgagctgatcgacgccat 410
>gb|BF260581.1|BF260581 HVSMEf0022G06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022G06f, mRNA sequence
Length = 836
Score = 153 bits (77), Expect = 2e-035
Identities = 163/192 (84%)
Strand = Plus / Plus
Query: 801 acgaccccaccgtgatgcaggacgtggtcacgcccaacgccatggacaaccagtactaca 860
||||||| || ||||||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 214 acgacccgacggtgatgcaggacgtggtgacgcccaacaagctggacaggcagtactaca 273
Query: 861 agaacgtgctctcgcacaccgtgctcttcacctccgacgccgcgctcctcacgtcgccgg 920
|||||||| | |||||||| |||||||||||||||||||| |||||| | ||||| |||
Sbjct: 274 agaacgtgttgtcgcacacggtgctcttcacctccgacgcggcgctcatgacgtccgcgg 333
Query: 921 agacggccaagttggtgctggacaacgccaagatccccgggtggtgggaggacaagttcg 980
||||||| | ||||| |||| |||||||| |||||||||||| ||||||||| | ||
Sbjct: 334 agacggcgagaatggtggtggagaacgccaanatccccgggtggagggaggacaggatca 393
Query: 981 agaaggccatgg 992
|||| |||||||
Sbjct: 394 agaaagccatgg 405
Score = 99.6 bits (50), Expect = 2e-019
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 591 cgcccacgtccaacctcagcgacctcgcctccagcttcgccgtcaagggcatgtcgctgg 650
|||| |||||||||||||||||||||| | ||||||| | | |||||||| | ||
Sbjct: 1 cgccgacgtccaacctcagcgacctcgtcgccagctttgtcatcaagggcctcaacacgg 60
Query: 651 aggacctggtcgtcctctccggcgcgcacaccgtcggccgctcccactgctcctccttcg 710
||||||||||||||||||||||||||||||| | || || ||||||||||| ||||| |
Sbjct: 61 aggacctggtcgtcctctccggcgcgcacactattgggcgttcccactgctcgtcctttg 120
Query: 711 gctccgaccgcctcgacggcccctccgacatcaa 744
||| || |||||| || |||||||||||||||
Sbjct: 121 tctctgatcgcctcaacaccccctccgacatcaa 154
>gb|BM443139.2|BM443139 EBro02_SQ002_N01_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_N01 5', mRNA sequence
Length = 352
Score = 151 bits (76), Expect = 7e-035
Identities = 178/212 (83%)
Strand = Plus / Plus
Query: 143 tgccaggccagcccttactaccctctggagctagggtactaccgttacacttgtccccag 202
|||||||||||||||| || || |||||| | |||| ||||| ||| || |||||
Sbjct: 141 tgccaggccagccctttctggccactggaggtcgggttctaccacgacaagtgcccccaa 200
Query: 203 gccgaggctatcgtcaaggccagcatggagaaggccatcgctcagaaccctggcaatggc 262
|| ||||| || |||||||| |||||| ||||||||| | |||||||| |||||||||
Sbjct: 201 gcggaggccgtcttcaaggccgacatggataaggccatctcgcagaaccccggcaatggc 260
Query: 263 gccgccgtcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgcttccgtg 322
|||||| | ||||||||||||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 261 gccgccatgatccgcatgctcttccacgactgtttcgttgagggttgcgatgcttccgtc 320
Query: 323 cttctcgacccgaccccgttcagcccgacgcc 354
|| || ||||||||||||||||||||||||||
Sbjct: 321 ctcctggacccgaccccgttcagcccgacgcc 352
>gb|BI778693.2|BI778693 EBro01_SQ001_B17_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_B17 5', mRNA sequence
Length = 449
Score = 133 bits (67), Expect = 2e-029
Identities = 121/139 (87%)
Strand = Plus / Plus
Query: 933 tggtgctggacaacgccaagatccccgggtggtgggaggacaagttcgagaaggccatgg 992
||||| |||| |||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 21 tggtggtggagaacgccaaaatccccgggtggtgggaggacaggttcgagaaggccatgg 80
Query: 993 tcaagatggccagcctcgaagtcaagactgggcaccaaggacaggtcaggaagaactgca 1052
| ||||||||| || |||| |||||||| || |||| || ||| ||||||||||||||
Sbjct: 81 tgaagatggccggcatcgaggtcaagaccggctaccagggccagatcaggaagaactgcc 140
Query: 1053 gggcgatcaatcactacta 1071
| || ||||| ||||||||
Sbjct: 141 gcgcaatcaaccactacta 159
>gb|BI777629.2|BI777629 EBro08_SQ001_B05_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ001_B05 5', mRNA sequence
Length = 347
Score = 121 bits (61), Expect = 7e-026
Identities = 133/157 (84%)
Strand = Plus / Plus
Query: 197 ccccaggccgaggctatcgtcaaggccagcatggagaaggccatcgctcagaaccctggc 256
|||||||| ||||| ||||||||| | |||| | |||||||| | |||||||| |||
Sbjct: 191 ccccaggcggaggccgtcgtcaagggcgtcatgatggaggccatctcccagaaccccggc 250
Query: 257 aatggcgccgccgtcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgct 316
|||||||||||| | ||||| ||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 251 aatggcgccgccatgatccgaatgctcttccacgactgtttcgtcgagggctgtgacgct 310
Query: 317 tccgtgcttctcgacccgaccccgttcagcccgacgc 353
|| || || || || || |||||||||||||||||||
Sbjct: 311 tcggttctcctggatcctaccccgttcagcccgacgc 347
>gb|AL504245.1|AL504245 AL504245 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04K15V 5', mRNA sequence
Length = 700
Score = 103 bits (52), Expect = 2e-020
Identities = 169/208 (81%)
Strand = Plus / Plus
Query: 270 tcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgcttccgtgcttctcg 329
||||||||||| ||||||| ||||||||||| |||| ||||||| || || || ||||
Sbjct: 216 tcatccgcatgttcttccacgactgcttcgtgcagggatgcgacggctcagtcctcctcg 275
Query: 330 acccgaccccgttcagcccgacgccggagaagctggccgcacccaacaacccgagcctgc 389
||||||| ||| | |||| ||||||||||||| | | |||||| ||| ||||| |
Sbjct: 276 acccgacgccggctaacccgcagccggagaagctgagccctcccaacttccccagcctcc 335
Query: 390 gcgggttcgagctgatcgacgccatcaaggacgccctcgaggccgcgtgccccggggtcg 449
| || |||||| |||||||||| |||||||||| ||||| || |||||||| ||||
Sbjct: 336 ggggcttcgaggtgatcgacgcggccaaggacgccgtcgagaaggcatgccccggcgtcg 395
Query: 450 tctcctgcgccgacatcatcgccttcgc 477
|||||||||| |||||| ||||||||||
Sbjct: 396 tctcctgcgcggacatcgtcgccttcgc 423
Score = 60.0 bits (30), Expect = 2e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 692 tcccactgctcctccttcggctccgaccgcctcgacggcccctccgacatcaac 745
||||| ||||| ||||||| |||||| || ||||||| ||||||||||||||||
Sbjct: 638 tcccattgctcatccttcgtctccgatcgtctcgacgtcccctccgacatcaac 691
Score = 42.1 bits (21), Expect = 0.049
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 525 acatgccgtcgggccgcctcgacgg 549
|||||||| ||||||||||||||||
Sbjct: 471 acatgccggcgggccgcctcgacgg 495
>gb|BQ465202.1|BQ465202 HU02O23r HU Hordeum vulgare subsp. vulgare cDNA clone HU02O23
5-PRIME, mRNA sequence
Length = 615
Score = 95.6 bits (48), Expect = 4e-018
Identities = 183/228 (80%)
Strand = Plus / Plus
Query: 260 ggcgccgccgtcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgcttcc 319
||||||| | ||||||||||| |||||| |||||||||||| ||||||| ||||| ||
Sbjct: 247 ggcgccggcatcatccgcatggccttccacgactgcttcgtccagggctgtgacgcgtcg 306
Query: 320 gtgcttctcgacccgaccccgttcagcccgacgccggagaagctggccgcacccaacaac 379
||||| || |||||||| ||| | |||| |||||||||||| | | | |||||| |
Sbjct: 307 gtgctgctggacccgacgccggcgaacccgcggccggagaagctcggcccgcccaacttc 366
Query: 380 ccgagcctgcgcgggttcgagctgatcgacgccatcaaggacgccctcgaggccgcgtgc 439
|| ||||||||||| |||||| |||||||||| ||||| | ||||||| |||
Sbjct: 367 cccagcctgcgcggcttcgaggtgatcgacgcggccaaggcggtcctcgagaggttctgc 426
Query: 440 cccggggtcgtctcctgcgccgacatcatcgccttcgcggcgcgcgac 487
|| || |||||||||||||| ||| ||||||||||||| || ||||||
Sbjct: 427 cctggagtcgtctcctgcgcggacgtcatcgccttcgccgcacgcgac 474
>gb|BQ465796.1|BQ465796 HU04L10r HU Hordeum vulgare subsp. vulgare cDNA clone HU04L10
5-PRIME, mRNA sequence
Length = 567
Score = 95.6 bits (48), Expect = 4e-018
Identities = 183/228 (80%)
Strand = Plus / Plus
Query: 260 ggcgccgccgtcatccgcatgctcttccatgactgcttcgtcgagggctgcgacgcttcc 319
||||||| | ||||||||||| |||||| |||||||||||| ||||||| ||||| ||
Sbjct: 19 ggcgccggcatcatccgcatggccttccacgactgcttcgtccagggctgtgacgcgtcg 78
Query: 320 gtgcttctcgacccgaccccgttcagcccgacgccggagaagctggccgcacccaacaac 379
||||| || |||||||| ||| | |||| |||||||||||| | | | |||||| |
Sbjct: 79 gtgctgctggacccgacgccggcgaacccgcggccggagaagctcggcccgcccaacttc 138
Query: 380 ccgagcctgcgcgggttcgagctgatcgacgccatcaaggacgccctcgaggccgcgtgc 439
|| ||||||||||| |||||| |||||||||| ||||| | ||||||| |||
Sbjct: 139 cccagcctgcgcggcttcgaggtgatcgacgcggccaaggcggtcctcgagaggttctgc 198
Query: 440 cccggggtcgtctcctgcgccgacatcatcgccttcgcggcgcgcgac 487
|| || |||||||||||||| ||| ||||||||||||| || ||||||
Sbjct: 199 cctggagtcgtctcctgcgcggacgtcatcgccttcgccgcacgcgac 246
Score = 50.1 bits (25), Expect = 2e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 665 ctctccggcgcgcacaccgtcggccgctcccactgctcctccttc 709
|||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 424 ctctccggcgcgcacaccatcggcgtgtcacactgctcctccttc 468
>gb|BM443130.2|BM443130 EBro02_SQ002_L06_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_L06 5', mRNA sequence
Length = 282
Score = 91.7 bits (46), Expect = 6e-017
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 143 tgccaggccagcccttactaccctctggagctagggtactaccgttacacttgtccccag 202
|||||||||||||||| || || |||||| | |||| ||||| ||| || |||||
Sbjct: 141 tgccaggccagccctttctggccactggaggtcgggttctaccacgacaagtgcccccaa 200
Query: 203 gccgaggctatcgtcaaggccagcatggagaaggccatcgctcagaaccctggcaatggc 262
|| ||||| ||||||||||| |||||||||||||||| | |||||||| |||||||||
Sbjct: 201 gcggaggccgtcgtcaaggccgtcatggagaaggccatctcccagaaccccggcaatggc 260
Query: 263 gccgccgtcatccgcatgctct 284
|||||| | |||||||||||||
Sbjct: 261 gccgccatgatccgcatgctct 282
>gb|BQ461135.1|BQ461135 HE01C07r HE Hordeum vulgare subsp. vulgare cDNA clone HE01C07
5-PRIME, mRNA sequence
Length = 426
Score = 89.7 bits (45), Expect = 2e-016
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 437 tgccccggggtcgtctcctgcgccgacatcatcgccttcgcggcgcgcgacgcgtcc 493
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 185 tgcccgggggtcgtctcctgcgccgacatcgtcgccttcgcggcccgcgacgcgtcc 241
Score = 52.0 bits (26), Expect = 5e-005
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 520 cttcgacatgccgtcgggccgcctcgacggcaccttctccaacgcctccgagtcggtc 577
||||| |||||| || ||||||||||||||| | ||||||||||| ||||| |||||
Sbjct: 262 cttcgccatgccctccggccgcctcgacggccgcgtctccaacgccaccgaggcggtc 319
Score = 46.1 bits (23), Expect = 0.003
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 282 tcttccatgactgcttcgtcgagggctgcgacgcttccgtgct 324
||||||| |||||||||||| |||||||||||| || |||||
Sbjct: 21 tcttccacgactgcttcgtcaggggctgcgacgcgtcggtgct 63
>gb|BI951776.1|BI951776 HVSMEm0002L16f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0002L16f, mRNA sequence
Length = 815
Score = 75.8 bits (38), Expect = 4e-012
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 338 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgacatcctcgcc 395
>gb|BI952845.1|BI952845 HVSMEm0007P04f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0007P04f, mRNA sequence
Length = 848
Score = 75.8 bits (38), Expect = 4e-012
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 411 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgacatcctcgcc 468
>gb|BI954451.1|BI954451 HVSMEm0017P19f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0017P19f, mRNA sequence
Length = 691
Score = 75.8 bits (38), Expect = 4e-012
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 339 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgacatcctcgcc 396
>gb|BI954673.1|BI954673 HVSMEm0019C12f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0019C12f, mRNA sequence
Length = 675
Score = 75.8 bits (38), Expect = 4e-012
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 177 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgacatcctcgcc 234
>gb|BI956180.1|BI956180 HVSMEm0025O19f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0025O19f, mRNA sequence
Length = 662
Score = 75.8 bits (38), Expect = 4e-012
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 225 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgacatcctcgcc 282
>gb|BE216352.1|BE216352 HV_CEb0010E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010E08f, mRNA sequence
Length = 727
Score = 75.8 bits (38), Expect = 4e-012
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 192 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgacatcctcgcc 249
>gb|BE215675.2|BE215675 HV_CEb0007N22f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0007N22f, mRNA sequence
Length = 522
Score = 75.8 bits (38), Expect = 4e-012
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 339 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgacatcctcgcc 396
>gb|BE519974.2|BE519974 HV_CEb0021O16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021O16f, mRNA sequence
Length = 709
Score = 75.8 bits (38), Expect = 4e-012
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 119 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgacatcctcgcc 176
>gb|BF626685.3|BF626685 HVSMEb0001B05f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001B05f, mRNA sequence
Length = 766
Score = 75.8 bits (38), Expect = 4e-012
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 207 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgacatcctcgcc 264
>gb|BF627973.3|BF627973 HVSMEb0002D13f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0002D13f, mRNA sequence
Length = 661
Score = 75.8 bits (38), Expect = 4e-012
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||||||| |||||
Sbjct: 339 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgacatcctcgcc 396
>gb|BF620751.2|BF620751 HVSMEc0020M03f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0020M03f, mRNA sequence
Length = 836
Score = 73.8 bits (37), Expect = 1e-011
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgc 471
||||| ||||||||||| ||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 332 caaggccgccctcgaggacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 388
Score = 42.1 bits (21), Expect = 0.049
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 270 tcatccgcatgctcttccatgactgcttcgtcgagggctgcgacg 314
|||||||| | | |||||| ||||||||||| ||||||||||||
Sbjct: 190 tcatccgcctccacttccacgactgcttcgtgcagggctgcgacg 234
>gb|BF259360.2|BF259360 HVSMEf0019G04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019G04f, mRNA sequence
Length = 525
Score = 73.8 bits (37), Expect = 1e-011
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgc 471
||||| ||||||||||| ||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 139 caaggccgccctcgaggacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 195
Score = 40.1 bits (20), Expect = 0.19
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 283 cttccatgactgcttcgtcgagggctgcgacg 314
|||||| ||||||||||| ||||||||||||
Sbjct: 10 cttccacgactgcttcgtgcagggctgcgacg 41
>gb|BI960099.1|BI960099 HVSMEn0023D18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023D18f, mRNA sequence
Length = 662
Score = 73.8 bits (37), Expect = 1e-011
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgc 471
||||| ||||||||||| ||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 164 caaggccgccctcgaggacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 220
Score = 40.1 bits (20), Expect = 0.19
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 283 cttccatgactgcttcgtcgagggctgcgacg 314
|||||| ||||||||||| ||||||||||||
Sbjct: 35 cttccacgactgcttcgtgcagggctgcgacg 66
>gb|CA017900.1|CA017900 HV06L11r HV Hordeum vulgare subsp. vulgare cDNA clone HV06L11
5-PRIME, mRNA sequence
Length = 500
Score = 73.8 bits (37), Expect = 1e-011
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgc 471
||||| ||||||||||| ||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 376 caaggccgccctcgaggacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 432
Score = 42.1 bits (21), Expect = 0.049
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 270 tcatccgcatgctcttccatgactgcttcgtcgagggctgcgacg 314
|||||||| | | |||||| ||||||||||| ||||||||||||
Sbjct: 234 tcatccgcctccacttccacgactgcttcgtgcagggctgcgacg 278
>gb|CA019914.1|CA019914 HV13L06r HV Hordeum vulgare subsp. vulgare cDNA clone HV13L06
5-PRIME, mRNA sequence
Length = 487
Score = 73.8 bits (37), Expect = 1e-011
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgc 471
||||| ||||||||||| ||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 379 caaggccgccctcgaggacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 435
Score = 42.1 bits (21), Expect = 0.049
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 270 tcatccgcatgctcttccatgactgcttcgtcgagggctgcgacg 314
|||||||| | | |||||| ||||||||||| ||||||||||||
Sbjct: 237 tcatccgcctccacttccacgactgcttcgtgcagggctgcgacg 281
>gb|AL450807.1|AL450807 AL450807 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04F12u 5', mRNA sequence
Length = 570
Score = 69.9 bits (35), Expect = 2e-010
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcctt 474
||||| ||||||||||||||| ||||| || ||||||||||||||||| ||| ||||| |
Sbjct: 343 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgatatcctcgccat 402
Query: 475 cgc 477
|||
Sbjct: 403 cgc 405
Score = 42.1 bits (21), Expect = 0.049
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 283 cttccatgactgcttcgtcgagggctgcgacgc 315
|||||| ||||||||||| |||||||||||||
Sbjct: 214 cttccacgactgcttcgtgcagggctgcgacgc 246
>gb|AL504878.1|AL504878 AL504878 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06K19V 5', mRNA sequence
Length = 412
Score = 69.9 bits (35), Expect = 2e-010
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 407 gacgccatcaaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatc 466
|||||| |||||| || |||||||| ||| |||||||| |||| ||||||||||||||||
Sbjct: 306 gacgccgtcaaggccgncctcgaggacgcctgccccggcgtcgnctcctgcgccgacatc 365
Query: 467 atcgc 471
||||
Sbjct: 366 ctcgc 370
Score = 42.1 bits (21), Expect = 0.049
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 270 tcatccgcatgctcttccatgactgcttcgtcgagggctgcgacg 314
|||||||| | | |||||| ||||||||||| ||||||||||||
Sbjct: 172 tcatccgcctccacttccacgactgcttcgtgcagggctgcgacg 216
>gb|AV916939.1|AV916939 AV916939 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c18 5', mRNA sequence
Length = 513
Score = 69.9 bits (35), Expect = 2e-010
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 383 agcctgcgcgggttcgagctgatcgacgccatcaaggacgccctcgaggccgcgtgcccc 442
||||| || ||||||||| |||||||||| ||||| || |||||||||| |||||
Sbjct: 42 agcctccgagggttcgaggtgatcgacgcggccaaggcggcgatcgaggccgcctgccca 101
Query: 443 ggggtcgtctcctgcgccgacatcatcgccttcgcggcgcgcgacgcgtcctgcttcct 501
|| ||||| ||||||||||| |||||||||| |||||||||||||||| ||||||
Sbjct: 102 ggcacagtctcatgcgccgacattgtcgccttcgctgcgcgcgacgcgtcctacttcct 160
>gb|CB878214.1|CB878214 HP07L18T HP Hordeum vulgare subsp. vulgare cDNA clone HP07L18
5-PRIME, mRNA sequence
Length = 616
Score = 69.9 bits (35), Expect = 2e-010
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcctt 474
||||| ||||||||||||||| ||||| || ||||||||||||||||| ||| ||||| |
Sbjct: 352 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgatatcctcgccat 411
Query: 475 cgc 477
|||
Sbjct: 412 cgc 414
Score = 42.1 bits (21), Expect = 0.049
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 283 cttccatgactgcttcgtcgagggctgcgacgc 315
|||||| ||||||||||| |||||||||||||
Sbjct: 223 cttccacgactgcttcgtgcagggctgcgacgc 255
>gb|CB878922.1|CB878922 HP10E23T HP Hordeum vulgare subsp. vulgare cDNA clone HP10E23
5-PRIME, mRNA sequence
Length = 512
Score = 69.9 bits (35), Expect = 2e-010
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcctt 474
||||| ||||||||||||||| ||||| || ||||||||||||||||| ||| ||||| |
Sbjct: 359 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgatatcctcgccat 418
Query: 475 cgc 477
|||
Sbjct: 419 cgc 421
Score = 42.1 bits (21), Expect = 0.049
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 283 cttccatgactgcttcgtcgagggctgcgacgc 315
|||||| ||||||||||| |||||||||||||
Sbjct: 230 cttccacgactgcttcgtgcagggctgcgacgc 262
>gb|AL503918.1|AL503918 AL503918 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03N16T 5', mRNA sequence
Length = 691
Score = 67.9 bits (34), Expect = 9e-010
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgc 471
||||| || |||||||| ||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 372 caaggccgncctcgaggacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 428
Score = 42.1 bits (21), Expect = 0.049
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 270 tcatccgcatgctcttccatgactgcttcgtcgagggctgcgacg 314
|||||||| | | |||||| ||||||||||| ||||||||||||
Sbjct: 230 tcatccgcctccacttccacgactgcttcgtgcagggctgcgacg 274
>gb|BF628685.2|BF628685 HVSMEb0007A23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007A23f, mRNA sequence
Length = 701
Score = 67.9 bits (34), Expect = 9e-010
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 657 tggtcgtcctctccggcgcgcacaccgtcggccgctcccactgctcctccttcg 710
||||| ||||||||||||| |||||||||||||||||| |||| |||||||||
Sbjct: 574 tggtcctcctctccggcgcccacaccgtcggccgctccttctgcgcctccttcg 627
Score = 56.0 bits (28), Expect = 3e-006
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 448 cgtctcctgcgccgacatcatcgccttcgcggcgcgcgac 487
||||||||||||||||||| | |||||||| |||||||||
Sbjct: 371 cgtctcctgcgccgacatcctggccttcgccgcgcgcgac 410
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 284 ttccatgactgcttcgtcgagggctgcgacgcttccgtgct 324
||||| |||||||||||| |||||||||||| ||||||||
Sbjct: 265 ttccacgactgcttcgtccggggctgcgacgcctccgtgct 305
>gb|BG300276.1|BG300276 HVSMEb0011O12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011O12f, mRNA sequence
Length = 516
Score = 67.9 bits (34), Expect = 9e-010
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 436 gtgccccggggtcgtctcctgcgccgacatcatcgccttcgcggcgcgcgacgc 489
||||||||||||||||||||||||||||||| |||| |||| || ||||||||
Sbjct: 393 gtgccccggggtcgtctcctgcgccgacatcgtcgctctcgccgcacgcgacgc 446
>gb|BG300359.1|BG300359 HVSMEb0016B04f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016B04f, mRNA sequence
Length = 622
Score = 67.9 bits (34), Expect = 9e-010
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 657 tggtcgtcctctccggcgcgcacaccgtcggccgctcccactgctcctccttcg 710
||||| ||||||||||||| |||||||||||||||||| |||| |||||||||
Sbjct: 46 tggtcctcctctccggcgcccacaccgtcggccgctccttctgcgcctccttcg 99
>gb|BG366591.1|BG366591 HVSMEi0007J01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0007J01f, mRNA sequence
Length = 486
Score = 67.9 bits (34), Expect = 9e-010
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 426 tcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgccttcgcggcgcgcg 485
|||||||||| |||||||| ||||||||||||||||||| ||||| |||| |||||||
Sbjct: 76 tcgaggccgcctgccccggcaccgtctcctgcgccgacatcctcgccctcgccgcgcgcg 135
Query: 486 ac 487
||
Sbjct: 136 ac 137
>gb|BF263244.2|BF263244 HV_CEa0006D18f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006D18f, mRNA sequence
Length = 932
Score = 67.9 bits (34), Expect = 9e-010
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||| ||| |||||
Sbjct: 357 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgatatcctcgcc 414
Score = 42.1 bits (21), Expect = 0.049
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 283 cttccatgactgcttcgtcgagggctgcgacgc 315
|||||| ||||||||||| |||||||||||||
Sbjct: 228 cttccacgactgcttcgtgcagggctgcgacgc 260
>gb|BF264659.2|BF264659 HV_CEa0010A08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0010A08f, mRNA sequence
Length = 842
Score = 67.9 bits (34), Expect = 9e-010
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 415 caaggacgccctcgaggccgcgtgccccggggtcgtctcctgcgccgacatcatcgcc 472
||||| ||||||||||||||| ||||| || ||||||||||||||||| ||| |||||
Sbjct: 162 caaggccgccctcgaggccgcctgccctggcgtcgtctcctgcgccgatatcctcgcc 219
Score = 42.1 bits (21), Expect = 0.049
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 283 cttccatgactgcttcgtcgagggctgcgacgc 315
|||||| ||||||||||| |||||||||||||
Sbjct: 33 cttccacgactgcttcgtgcagggctgcgacgc 65
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 219,790
Number of Sequences: 312970
Number of extensions: 219790
Number of successful extensions: 62417
Number of sequences better than 0.5: 380
Number of HSP's better than 0.5 without gapping: 373
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 61454
Number of HSP's gapped (non-prelim): 940
length of query: 1403
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1384
effective length of database: 169,188,109
effective search space: 234156342856
effective search space used: 234156342856
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)