BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591258.2.1
(819 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF623901.2|BF623901 HVSMEa0007J15f Hordeum vulgare seedl... 90 1e-016
gb|BF630555.2|BF630555 HVSMEb0011I21f Hordeum vulgare seedl... 90 1e-016
gb|BF259495.2|BF259495 HVSMEf0019H19f Hordeum vulgare seedl... 90 1e-016
gb|BI950057.1|BI950057 HVSMEl0018B24f Hordeum vulgare spike... 90 1e-016
gb|BI957644.1|BI957644 HVSMEn0010H17f Hordeum vulgare rachi... 90 1e-016
gb|BI958809.1|BI958809 HVSMEn0016L12f Hordeum vulgare rachi... 90 1e-016
gb|BI960118.1|BI960118 HVSMEn0023E18f Hordeum vulgare rachi... 90 1e-016
gb|BI960531.1|BI960531 HVSMEn0024O24f Hordeum vulgare rachi... 90 1e-016
gb|BI960535.1|BI960535 HVSMEn0024P05f Hordeum vulgare rachi... 90 1e-016
gb|BM371957.2|BM371957 EBma08_SQ004_I06_R maternal, 28 DPA,... 90 1e-016
gb|BQ762267.1|BQ762267 EBro01_SQ005_F11_R root, 3 week, hyd... 90 1e-016
gb|BU998750.1|BU998750 HI12A22r HI Hordeum vulgare subsp. v... 90 1e-016
gb|BU998774.1|BU998774 HI12C04r HI Hordeum vulgare subsp. v... 90 1e-016
gb|BJ549094.1|BJ549094 BJ549094 K. Sato unpublished cDNA li... 90 1e-016
gb|BI954074.1|BI954074 HVSMEm0016B12f Hordeum vulgare green... 84 8e-015
gb|BI960325.1|BI960325 HVSMEn0024D19f Hordeum vulgare rachi... 80 1e-013
gb|BQ763567.1|BQ763567 EBro02_SQ008_E22_R root, 3 week, hyd... 80 1e-013
gb|BU979082.1|BU979082 HA15B18r HA Hordeum vulgare subsp. v... 80 1e-013
gb|BU979265.1|BU979265 HA15J22r HA Hordeum vulgare subsp. v... 80 1e-013
gb|CA001451.1|CA001451 HS17P10u HS Hordeum vulgare subsp. v... 80 1e-013
gb|CA030887.1|CA030887 HX08G19r HX Hordeum vulgare subsp. v... 80 1e-013
gb|CB859935.1|CB859935 HI12A22w HI Hordeum vulgare subsp. v... 80 1e-013
gb|CB859954.1|CB859954 HI12C04w HI Hordeum vulgare subsp. v... 80 1e-013
gb|CB880406.1|CB880406 HM06H04w HM Hordeum vulgare subsp. v... 80 1e-013
gb|BU994270.1|BU994270 HM06G24r HM Hordeum vulgare subsp. v... 74 8e-012
gb|CB880402.1|CB880402 HM06G24w HM Hordeum vulgare subsp. v... 74 8e-012
gb|BJ549697.1|BJ549697 BJ549697 K. Sato unpublished cDNA li... 72 3e-011
gb|BI957613.1|BI957613 HVSMEn0010F23f Hordeum vulgare rachi... 68 5e-010
gb|BI960085.1|BI960085 HVSMEn0023C11f Hordeum vulgare rachi... 68 5e-010
gb|AL450922.1|AL450922 AL450922 Hordeum vulgare Barke etiol... 66 2e-009
gb|AL503249.1|AL503249 AL503249 Hordeum vulgare Barke roots... 66 2e-009
gb|AL504625.1|AL504625 AL504625 Hordeum vulgare Barke roots... 66 2e-009
gb|AL505702.1|AL505702 AL505702 Hordeum vulgare Barke roots... 66 2e-009
gb|BF624013.2|BF624013 HVSMEa0008J18f Hordeum vulgare seedl... 66 2e-009
gb|BF624054.2|BF624054 HVSMEa0009A08f Hordeum vulgare seedl... 66 2e-009
gb|BF625981.2|BF625981 HVSMEa0015B13f Hordeum vulgare seedl... 66 2e-009
gb|BF626523.2|BF626523 HVSMEa0018K06f Hordeum vulgare seedl... 66 2e-009
gb|BG299397.1|BG299397 HVSMEa0019M12f Hordeum vulgare seedl... 66 2e-009
gb|BF630744.2|BF630744 HVSMEb0013N02f Hordeum vulgare seedl... 66 2e-009
gb|BG300054.1|BG300054 HVSMEb0011D09f Hordeum vulgare seedl... 66 2e-009
gb|BF259949.2|BF259949 HVSMEf0020L06f Hordeum vulgare seedl... 66 2e-009
gb|BI953073.1|BI953073 HVSMEm0009M16f Hordeum vulgare green... 66 2e-009
gb|BI953755.1|BI953755 HVSMEm0014D01f Hordeum vulgare green... 66 2e-009
gb|BI954845.1|BI954845 HVSMEm0020A17f Hordeum vulgare green... 66 2e-009
gb|BI955535.1|BI955535 HVSMEm0023H22f Hordeum vulgare green... 66 2e-009
gb|BI956370.1|BI956370 HVSMEn0002O21f Hordeum vulgare rachi... 66 2e-009
gb|BI956521.1|BI956521 HVSMEn0003O13f Hordeum vulgare rachi... 66 2e-009
gb|BI956671.1|BI956671 HVSMEn0004L02f Hordeum vulgare rachi... 66 2e-009
gb|BI956791.1|BI956791 HVSMEn0005F21f Hordeum vulgare rachi... 66 2e-009
gb|BI957447.1|BI957447 HVSMEn0009J18f Hordeum vulgare rachi... 66 2e-009
gb|BI957460.1|BI957460 HVSMEn0009L10f Hordeum vulgare rachi... 66 2e-009
gb|BI957501.1|BI957501 HVSMEn0009O03f Hordeum vulgare rachi... 66 2e-009
gb|BI957710.1|BI957710 HVSMEn0010N01f Hordeum vulgare rachi... 66 2e-009
gb|BI957746.1|BI957746 HVSMEn0010P24f Hordeum vulgare rachi... 66 2e-009
gb|BI957989.1|BI957989 HVSMEn0012L03f Hordeum vulgare rachi... 66 2e-009
gb|BE215236.1|BE215236 HV_CEb0006D22f Hordeum vulgare seedl... 66 2e-009
gb|BE215821.1|BE215821 HV_CEb0008J07f Hordeum vulgare seedl... 66 2e-009
gb|BE519617.1|BE519617 HV_CEb0016H01f Hordeum vulgare seedl... 66 2e-009
gb|BE519891.1|BE519891 HV_CEb0021J17f Hordeum vulgare seedl... 66 2e-009
gb|BE559087.1|BE559087 HV_CEb0022L14f Hordeum vulgare seedl... 66 2e-009
gb|BF065160.1|BF065160 HV_CEb0023K10f Hordeum vulgare seedl... 66 2e-009
gb|BF065240.1|BF065240 HV_CEb0024I11f Hordeum vulgare seedl... 66 2e-009
gb|BF065682.1|BF065682 HV_CEb0013G02f Hordeum vulgare seedl... 66 2e-009
gb|BF264389.2|BF264389 HV_CEa0009E18f Hordeum vulgare seedl... 66 2e-009
gb|BE214450.2|BE214450 HV_CEb0003H21f Hordeum vulgare seedl... 66 2e-009
gb|BE216025.2|BE216025 HV_CEb0009C13f Hordeum vulgare seedl... 66 2e-009
gb|BE216491.2|BE216491 HV_CEb0010K05f Hordeum vulgare seedl... 66 2e-009
gb|BI959235.1|BI959235 HVSMEn0018M17f Hordeum vulgare rachi... 66 2e-009
gb|BI959367.1|BI959367 HVSMEn0019G08f Hordeum vulgare rachi... 66 2e-009
gb|BI959395.1|BI959395 HVSMEn0019I06f Hordeum vulgare rachi... 66 2e-009
gb|BI959561.1|BI959561 HVSMEn0020D05f Hordeum vulgare rachi... 66 2e-009
gb|BI959659.1|BI959659 HVSMEn0020K11f Hordeum vulgare rachi... 66 2e-009
gb|BI960119.1|BI960119 HVSMEn0023E19f Hordeum vulgare rachi... 66 2e-009
gb|BI960120.1|BI960120 HVSMEn0023E20f Hordeum vulgare rachi... 66 2e-009
gb|BI960166.1|BI960166 HVSMEn0023I06f Hordeum vulgare rachi... 66 2e-009
gb|BE215905.3|BE215905 HV_CEb0008M22f Hordeum vulgare seedl... 66 2e-009
gb|BF064997.3|BF064997 HV_CEb0022G03f Hordeum vulgare seedl... 66 2e-009
gb|BM444060.1|BM444060 EBem09_SQ004_A16_R embryo, 1 Day ger... 66 2e-009
gb|BQ460884.1|BQ460884 HE01O17r HE Hordeum vulgare subsp. v... 66 2e-009
gb|BQ467961.1|BQ467961 HR01H17r HR Hordeum vulgare subsp. v... 66 2e-009
gb|BQ468035.1|BQ468035 HR01L16r HR Hordeum vulgare subsp. v... 66 2e-009
gb|BQ468043.1|BQ468043 HR01M03r HR Hordeum vulgare subsp. v... 66 2e-009
gb|BQ471953.1|BQ471953 HV03P16r HV Hordeum vulgare subsp. v... 66 2e-009
gb|BI780485.2|BI780485 EBem08_SQ001_G14_R embryo, 40 DPA, n... 66 2e-009
gb|BM443904.2|BM443904 EBem09_SQ001_P18_R embryo, 1 Day ger... 66 2e-009
gb|BM100502.2|BM100502 EBma01_SQ005_G14_R maternal, 4 DPA, ... 66 2e-009
gb|BI779395.2|BI779395 EBro01_SQ003_O04_R root, 3 week, hyd... 66 2e-009
gb|BM370604.2|BM370604 EBro08_SQ004_L13_R root, 3 week, dro... 66 2e-009
gb|BQ765794.1|BQ765794 EBro03_SQ008_N04_R root, 3 week, wat... 66 2e-009
gb|BU977235.1|BU977235 HA11B05r HA Hordeum vulgare subsp. v... 66 2e-009
gb|CA006913.1|CA006913 HU06B07r HU Hordeum vulgare subsp. v... 66 2e-009
gb|CA017659.1|CA017659 HV05N12r HV Hordeum vulgare subsp. v... 66 2e-009
gb|CA017891.1|CA017891 HV06L01r HV Hordeum vulgare subsp. v... 66 2e-009
gb|CA018264.1|CA018264 HV08B21r HV Hordeum vulgare subsp. v... 66 2e-009
gb|CA018785.1|CA018785 HV09K09r HV Hordeum vulgare subsp. v... 66 2e-009
gb|CA019093.1|CA019093 HV10M04r HV Hordeum vulgare subsp. v... 66 2e-009
gb|CA020280.1|CA020280 HV14N14r HV Hordeum vulgare subsp. v... 66 2e-009
gb|CA020338.1|CA020338 HZ36A04r HZ Hordeum vulgare subsp. v... 66 2e-009
gb|CA020824.1|CA020824 HZ37P01r HZ Hordeum vulgare subsp. v... 66 2e-009
gb|CA021273.1|CA021273 HZ39J21r HZ Hordeum vulgare subsp. v... 66 2e-009
gb|CA022538.1|CA022538 HZ43I18r HZ Hordeum vulgare subsp. v... 66 2e-009
gb|CA023184.1|CA023184 HZ45H18r HZ Hordeum vulgare subsp. v... 66 2e-009
gb|CA029054.1|CA029054 HZ64B04r HZ Hordeum vulgare subsp. v... 66 2e-009
gb|BF627066.2|BF627066 HVSMEb0002G16f Hordeum vulgare seedl... 64 8e-009
gb|BF256079.2|BF256079 HVSMEf0008K20f Hordeum vulgare seedl... 64 8e-009
gb|BF260414.3|BF260414 HVSMEf0021O22f Hordeum vulgare seedl... 64 8e-009
gb|BG415448.2|BG415448 HVSMEk0006I14f Hordeum vulgare testa... 64 8e-009
gb|AV924692.1|AV924692 AV924692 K. Sato unpublished cDNA li... 64 8e-009
gb|BJ466490.1|BJ466490 BJ466490 K. Sato unpublished cDNA li... 64 8e-009
gb|BQ660910.1|BQ660910 HM01A23w HM Hordeum vulgare subsp. v... 64 8e-009
gb|BQ661501.1|BQ661501 HM03L08u HM Hordeum vulgare subsp. v... 64 8e-009
gb|BU977318.1|BU977318 HA11D12u HA Hordeum vulgare subsp. v... 64 8e-009
gb|CA017209.1|CA017209 HV14G11u HV Hordeum vulgare subsp. v... 64 8e-009
gb|BF257218.2|BF257218 HVSMEf0012D15f Hordeum vulgare seedl... 60 1e-007
gb|BE558675.1|BE558675 HV_CEb0020A16f Hordeum vulgare seedl... 60 1e-007
gb|BI958437.1|BI958437 HVSMEn0014P16f Hordeum vulgare rachi... 60 1e-007
gb|BI958752.1|BI958752 HVSMEn0016H12f Hordeum vulgare rachi... 60 1e-007
gb|BI960399.1|BI960399 HVSMEn0024H14f Hordeum vulgare rachi... 60 1e-007
gb|BJ464618.1|BJ464618 BJ464618 K. Sato unpublished cDNA li... 60 1e-007
gb|BJ464739.1|BJ464739 BJ464739 K. Sato unpublished cDNA li... 60 1e-007
gb|BJ467041.1|BJ467041 BJ467041 K. Sato unpublished cDNA li... 60 1e-007
gb|BJ468176.1|BJ468176 BJ468176 K. Sato unpublished cDNA li... 60 1e-007
gb|BI779178.2|BI779178 EBro01_SQ003_D18_R root, 3 week, hyd... 60 1e-007
gb|CB878369.1|CB878369 HP08E22T HP Hordeum vulgare subsp. v... 60 1e-007
gb|CB878414.1|CB878414 HP08H09T HP Hordeum vulgare subsp. v... 60 1e-007
gb|BI952091.1|BI952091 HVSMEm0004J09f Hordeum vulgare green... 58 5e-007
gb|BI956599.1|BI956599 HVSMEn0004F14f Hordeum vulgare rachi... 58 5e-007
gb|BF266762.2|BF266762 HV_CEa0015P21f Hordeum vulgare seedl... 58 5e-007
gb|BF260683.3|BF260683 HVSMEf0022K16f Hordeum vulgare seedl... 58 5e-007
gb|AV929789.1|AV929789 AV929789 K. Sato unpublished cDNA li... 58 5e-007
gb|BF261040.2|BF261040 HVSMEf0023J16f Hordeum vulgare seedl... 56 2e-006
gb|BI958431.1|BI958431 HVSMEn0014O22f Hordeum vulgare rachi... 56 2e-006
gb|BJ463542.1|BJ463542 BJ463542 K. Sato unpublished cDNA li... 56 2e-006
gb|BQ468365.1|BQ468365 HM01A23T HM Hordeum vulgare subsp. v... 56 2e-006
gb|BU977317.1|BU977317 HA11D12r HA Hordeum vulgare subsp. v... 56 2e-006
gb|BU994274.1|BU994274 HM06H04r HM Hordeum vulgare subsp. v... 56 2e-006
gb|CA007423.1|CA007423 HU07O17r HU Hordeum vulgare subsp. v... 56 2e-006
gb|CA020122.1|CA020122 HV14G11r HV Hordeum vulgare subsp. v... 56 2e-006
gb|CA025276.1|CA025276 HZ51K20r HZ Hordeum vulgare subsp. v... 56 2e-006
gb|AL500139.1|AL500139 AL500139 Hordeum vulgare Barke etiol... 52 3e-005
gb|BF254858.3|BF254858 HVSMEf0005D24f Hordeum vulgare seedl... 52 3e-005
gb|BE213939.2|BE213939 HV_CEb0001L07f Hordeum vulgare seedl... 52 3e-005
gb|CA016838.1|CA016838 HV05N12u HV Hordeum vulgare subsp. v... 52 3e-005
gb|AL504534.1|AL504534 AL504534 Hordeum vulgare Barke roots... 50 1e-004
gb|BI956207.1|BI956207 HVSMEn0001C02f Hordeum vulgare rachi... 50 1e-004
gb|BF254803.3|BF254803 HVSMEf0005B13f Hordeum vulgare seedl... 50 1e-004
gb|AL509899.1|AL509899 AL509899 Hordeum vulgare Barke devel... 48 5e-004
gb|BF619963.2|BF619963 HVSMEc0009N12f Hordeum vulgare seedl... 48 5e-004
gb|BI959396.1|BI959396 HVSMEn0019I08f Hordeum vulgare rachi... 48 5e-004
gb|BI960058.1|BI960058 HVSMEn0023A12f Hordeum vulgare rachi... 48 5e-004
gb|AW982228.3|AW982228 HVSMEg0002G09f Hordeum vulgare pre-a... 48 5e-004
gb|BM097007.2|BM097007 EBpi07_SQ002_B16_R pistil, 12 DPA, n... 48 5e-004
gb|AL500625.1|AL500625 AL500625 Hordeum vulgare Barke roots... 44 0.007
gb|AL500661.1|AL500661 AL500661 Hordeum vulgare Barke roots... 44 0.007
gb|AL501842.1|AL501842 AL501842 Hordeum vulgare Barke roots... 44 0.007
gb|AL501924.1|AL501924 AL501924 Hordeum vulgare Barke roots... 44 0.007
gb|AL503230.1|AL503230 AL503230 Hordeum vulgare Barke roots... 44 0.007
gb|BG370011.2|BG370011 HVSMEi0026P07f Hordeum vulgare 20 DA... 44 0.007
gb|AJ431813.1|AJ431813 AJ431813 S00002 Hordeum vulgare subs... 44 0.007
gb|BQ661977.1|BQ661977 HR01B07u HR Hordeum vulgare subsp. v... 44 0.007
gb|BQ662110.1|BQ662110 HR01J19u HR Hordeum vulgare subsp. v... 44 0.007
gb|BQ662142.1|BQ662142 HR01L16u HR Hordeum vulgare subsp. v... 44 0.007
gb|CA016634.1|CA016634 HV08B21u HV Hordeum vulgare subsp. v... 44 0.007
gb|CA016710.1|CA016710 HV06L01u HV Hordeum vulgare subsp. v... 44 0.007
gb|CA016746.1|CA016746 HV06J09u HV Hordeum vulgare subsp. v... 44 0.007
gb|CA017111.1|CA017111 HV14N14u HV Hordeum vulgare subsp. v... 44 0.007
gb|CD663835.1|CD663835 UCRHV18_06dc01_b1 Drought-stressed D... 44 0.007
gb|BF256995.2|BF256995 HVSMEf0011J05f Hordeum vulgare seedl... 42 0.028
gb|BI960633.1|BI960633 HVSMEn0025H07f Hordeum vulgare rachi... 42 0.028
gb|CA025050.1|CA025050 HZ51B06r HZ Hordeum vulgare subsp. v... 42 0.028
gb|BF629072.2|BF629072 HVSMEb0009M09f Hordeum vulgare seedl... 40 0.11
emb|AJ234789.1|HVU234789 Hordeum vulgare genomic DNA fragme... 40 0.11
gb|BE420909.1|BE420909 HWM003.G10 ITEC HWM Barley Leaf Libr... 38 0.44
gb|BE420932.1|BE420932 HWM004.A09 ITEC HWM Barley Leaf Libr... 38 0.44
gb|BE421217.1|BE421217 HWM007.A06 ITEC HWM Barley Leaf Libr... 38 0.44
gb|BE421517.1|BE421517 HWM010.B06 ITEC HWM Barley Leaf Libr... 38 0.44
gb|BE421854.1|BE421854 HWM015cE.04r ITEC HWM Barley Leaf Li... 38 0.44
gb|BE421934.1|BE421934 HWM016cG.03r ITEC HWM Barley Leaf Li... 38 0.44
gb|AL501387.1|AL501387 AL501387 Hordeum vulgare Barke roots... 38 0.44
gb|AL503297.1|AL503297 AL503297 Hordeum vulgare Barke roots... 38 0.44
gb|BF627424.1|BF627424 HVSMEb0004N05f Hordeum vulgare seedl... 38 0.44
gb|BF627474.2|BF627474 HVSMEb0004P07f Hordeum vulgare seedl... 38 0.44
gb|BI956742.1|BI956742 HVSMEn0005B07f Hordeum vulgare rachi... 38 0.44
gb|BE213769.1|BE213769 HV_CEb0001D15f Hordeum vulgare seedl... 38 0.44
gb|BE214711.1|BE214711 HV_CEb0004E20f Hordeum vulgare seedl... 38 0.44
gb|BE214736.1|BE214736 HV_CEb0004G14f Hordeum vulgare seedl... 38 0.44
gb|BE215789.1|BE215789 HV_CEb0008H23f Hordeum vulgare seedl... 38 0.44
gb|BE519935.1|BE519935 HV_CEb0021M09f Hordeum vulgare seedl... 38 0.44
gb|BF064613.1|BF064613 HV_CEb0016E07f Hordeum vulgare seedl... 38 0.44
gb|BF065452.1|BF065452 HV_CEb0012H12f Hordeum vulgare seedl... 38 0.44
gb|BE215439.2|BE215439 HV_CEb0006M20f Hordeum vulgare seedl... 38 0.44
gb|BG417308.1|BG417308 HVSMEk0017H11f Hordeum vulgare testa... 38 0.44
gb|BG417314.1|BG417314 HVSMEk0017H17f Hordeum vulgare testa... 38 0.44
gb|BG366063.2|BG366063 HVSMEi0005A23f Hordeum vulgare 20 DA... 38 0.44
gb|BE214901.2|BE214901 HV_CEb0005B09f Hordeum vulgare seedl... 38 0.44
gb|BE216163.2|BE216163 HV_CEb0009K13f Hordeum vulgare seedl... 38 0.44
gb|BF064571.2|BF064571 HV_CEb0015O16f Hordeum vulgare seedl... 38 0.44
gb|BF064573.2|BF064573 HV_CEb0015O20f Hordeum vulgare seedl... 38 0.44
gb|AV934364.1|AV934364 AV934364 K. Sato unpublished cDNA li... 38 0.44
gb|BQ469203.1|BQ469203 HM03L08r HM Hordeum vulgare subsp. v... 38 0.44
gb|BQ664282.1|BQ664282 HV02K21u HV Hordeum vulgare subsp. v... 38 0.44
gb|BI780699.2|BI780699 EBes01_SQ001_N09_R embryo sac, 4-6 D... 38 0.44
gb|BI780783.2|BI780783 EBes01_SQ002_D04_R embryo sac, 4-6 D... 38 0.44
gb|BI777872.2|BI777872 EBro07_SQ001_A09_R root, 3 week, red... 38 0.44
gb|BM370212.2|BM370212 EBro08_SQ003_F12_R root, 3 week, dro... 38 0.44
gb|CA032263.1|CA032263 HX12I04r HX Hordeum vulgare subsp. v... 38 0.44
>gb|BF623901.2|BF623901 HVSMEa0007J15f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007J15f, mRNA sequence
Length = 491
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 413 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 357
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 356 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 297
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 296 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 239
>gb|BF630555.2|BF630555 HVSMEb0011I21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011I21f, mRNA sequence
Length = 736
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 549 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 493
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 492 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 433
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 432 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 375
Score = 71.9 bits (36), Expect = 3e-011
Identities = 87/104 (83%)
Strand = Plus / Minus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| ||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 713 gtgttgtcgtagccgagaaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 654
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 653 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 610
>gb|BF259495.2|BF259495 HVSMEf0019H19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019H19f, mRNA sequence
Length = 759
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 271 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 215
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 214 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 155
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 154 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 97
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 434 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 375
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 374 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 331
>gb|BI950057.1|BI950057 HVSMEl0018B24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0018B24f, mRNA sequence
Length = 880
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 654 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 598
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 597 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 538
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 537 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 480
Score = 75.8 bits (38), Expect = 2e-012
Identities = 87/104 (83%)
Strand = Plus / Minus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 817 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatnaggcgctcgtggtag 758
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|| ||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 757 ttnaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 714
>gb|BI957644.1|BI957644 HVSMEn0010H17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010H17f, mRNA sequence
Length = 652
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 546 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 490
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 489 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 430
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 429 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 372
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 402 tagttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
||||||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 652 tagttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 606
>gb|BI958809.1|BI958809 HVSMEn0016L12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016L12f, mRNA sequence
Length = 649
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 543 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 487
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 486 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 427
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 426 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 369
>gb|BI960118.1|BI960118 HVSMEn0023E18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023E18f, mRNA sequence
Length = 637
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 209 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 153
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 152 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 93
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 92 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 35
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 372 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 313
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 312 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 269
>gb|BI960531.1|BI960531 HVSMEn0024O24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024O24f, mRNA sequence
Length = 631
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 534 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 478
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 477 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 418
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 417 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 360
Score = 40.1 bits (20), Expect = 0.11
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 421 tgtccgcgtccacgaacgcgaagtcgaa 448
|||||||||||||||| ||||||||||
Sbjct: 621 tgtccgcgtccacgaagacgaagtcgaa 594
>gb|BI960535.1|BI960535 HVSMEn0024P05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024P05f, mRNA sequence
Length = 655
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 539 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 483
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 482 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 423
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 422 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 365
Score = 58.0 bits (29), Expect = 5e-007
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 393 cgctcgtggtagttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||||||||||||||| |||| || |||| ||||||||||| ||||||||||
Sbjct: 654 cgctcgtggtagttgaggtagttgtccntgtcggcgtccacgaagacgaagtcgaa 599
>gb|BM371957.2|BM371957 EBma08_SQ004_I06_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_I06 5', mRNA sequence
Length = 673
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 551 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 495
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 494 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 435
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 434 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 377
Score = 63.9 bits (32), Expect = 8e-009
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 393 cgctcgtggtagttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||||||||||||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 666 cgctcgtggtagttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 611
>gb|BQ762267.1|BQ762267 EBro01_SQ005_F11_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_F11 5', mRNA sequence
Length = 664
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 216 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 160
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 159 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 100
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 99 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 42
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 379 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 320
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 319 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 276
>gb|BU998750.1|BU998750 HI12A22r HI Hordeum vulgare subsp. vulgare cDNA clone HI12A22
5-PRIME, mRNA sequence
Length = 670
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 554 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 498
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 497 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 438
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 437 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 380
Score = 63.9 bits (32), Expect = 8e-009
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 393 cgctcgtggtagttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||||||||||||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 669 cgctcgtggtagttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 614
>gb|BU998774.1|BU998774 HI12C04r HI Hordeum vulgare subsp. vulgare cDNA clone HI12C04
5-PRIME, mRNA sequence
Length = 649
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 551 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 495
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 494 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 435
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 434 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 377
Score = 38.2 bits (19), Expect = 0.44
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 418 ccttgtccgcgtccacgaacgcgaagtcgaa 448
||||||| ||||||||||| ||||||||||
Sbjct: 641 ccttgtcggcgtccacgaagacgaagtcgaa 611
>gb|BJ549094.1|BJ549094 BJ549094 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28c08 5', mRNA sequence
Length = 509
Score = 89.7 bits (45), Expect = 1e-016
Identities = 147/179 (82%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||||||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 228 cgcggaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 172
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 171 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 112
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 111 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 54
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 391 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 332
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 331 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 288
>gb|BI954074.1|BI954074 HVSMEm0016B12f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0016B12f, mRNA sequence
Length = 671
Score = 83.8 bits (42), Expect = 8e-015
Identities = 146/179 (81%), Gaps = 4/179 (2%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgatcaccggcgacccaatctggt 567
|||| ||||||||||||||||||||||||||||||||||| |||| ||| | | |
Sbjct: 615 cgcgnaagtcgatcttgtgcgccacgccggccttctcgatgcacggcagccc---cagct 559
Query: 568 cgtagctctcgcgggtaacgtcgatggccacaatcttgccgtcgtcggggagggcgaggg 627
||||| |||||||| | | ||| ||||||| || ||||||||||||||| |||||| |
Sbjct: 558 cgtagttctcgcggttgatgtccatggccaagatggtgccgtcgtcggggatggcgagcg 499
Query: 628 cggtgaacgagcagcgagtacccggtgaagacgccaacctcgatggcgttcttggcgcc 686
||||| ||||||| ||||| || ||| ||||||| | ||| |||| |||||||||||
Sbjct: 498 cggtg-gcgagcagggagtagcccgtgtagacgccgatctccatggtcttcttggcgcc 441
>gb|BI960325.1|BI960325 HVSMEn0024D19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024D19f, mRNA sequence
Length = 591
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 212 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 153
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 152 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 109
Score = 79.8 bits (40), Expect = 1e-013
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 10
>gb|BQ763567.1|BQ763567 EBro02_SQ008_E22_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_E22 5', mRNA sequence
Length = 425
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 111 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 52
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 51 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 8
>gb|BU979082.1|BU979082 HA15B18r HA Hordeum vulgare subsp. vulgare cDNA clone HA15B18
5-PRIME, mRNA sequence
Length = 593
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 222 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 163
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 162 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 119
Score = 79.8 bits (40), Expect = 1e-013
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 20
>gb|BU979265.1|BU979265 HA15J22r HA Hordeum vulgare subsp. vulgare cDNA clone HA15J22
5-PRIME, mRNA sequence
Length = 507
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 222 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 163
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 162 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 119
Score = 79.8 bits (40), Expect = 1e-013
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 20
>gb|CA001451.1|CA001451 HS17P10u HS Hordeum vulgare subsp. vulgare cDNA clone HS17P10
3-PRIME, mRNA sequence
Length = 423
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 317 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 376
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 377 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 420
>gb|CA030887.1|CA030887 HX08G19r HX Hordeum vulgare subsp. vulgare cDNA clone HX08G19
5-PRIME, mRNA sequence
Length = 577
Score = 79.8 bits (40), Expect = 1e-013
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 557
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 355 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 414
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 415 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 458
>gb|CB859935.1|CB859935 HI12A22w HI Hordeum vulgare subsp. vulgare cDNA clone HI12A22
3-PRIME, mRNA sequence
Length = 549
Score = 79.8 bits (40), Expect = 1e-013
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 539
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 337 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 396
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 397 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 440
>gb|CB859954.1|CB859954 HI12C04w HI Hordeum vulgare subsp. vulgare cDNA clone HI12C04
3-PRIME, mRNA sequence
Length = 552
Score = 79.8 bits (40), Expect = 1e-013
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 537
Score = 73.8 bits (37), Expect = 8e-012
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 335 gtgttgtcgtanccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 394
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 395 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 438
>gb|CB880406.1|CB880406 HM06H04w HM Hordeum vulgare subsp. vulgare cDNA clone HM06H04
3-PRIME, mRNA sequence
Length = 492
Score = 79.8 bits (40), Expect = 1e-013
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 377 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 436
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcgaa 448
|||||| |||| ||||||| ||||||||||| ||||||||||
Sbjct: 437 ttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaa 480
>gb|BU994270.1|BU994270 HM06G24r HM Hordeum vulgare subsp. vulgare cDNA clone HM06G24
5-PRIME, mRNA sequence
Length = 516
Score = 73.8 bits (37), Expect = 8e-012
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 323 ggccacggacccgccccacagcgtgttgtcgtaggcgatgaggcccccgaccctgagcag 382
||||||||| |||||||| ||||||||||||||||||||| ||| ||||| | | |||
Sbjct: 407 ggccacggagccgccccagagcgtgttgtcgtaggcgatggtgccgccgacgcgcaccag 348
Query: 383 ctgcagcagccgctcgtggta 403
|||||||||||||||||||
Sbjct: 347 gcgcagcagccgctcgtggta 327
Score = 65.9 bits (33), Expect = 2e-009
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 510 cggaagtcgatcttgtgcgccacgccggccttctcgatcaccggc 554
|||||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 249 cggaagtccaccttgtgcgcgacgccggccttctcgatcaccggc 205
>gb|CB880402.1|CB880402 HM06G24w HM Hordeum vulgare subsp. vulgare cDNA clone HM06G24
3-PRIME, mRNA sequence
Length = 569
Score = 73.8 bits (37), Expect = 8e-012
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 323 ggccacggacccgccccacagcgtgttgtcgtaggcgatgaggcccccgaccctgagcag 382
||||||||| |||||||| ||||||||||||||||||||| ||| ||||| | | |||
Sbjct: 330 ggccacggagccgccccagagcgtgttgtcgtaggcgatggtgccgccgacgcgcaccag 389
Query: 383 ctgcagcagccgctcgtggta 403
|||||||||||||||||||
Sbjct: 390 gcgcagcagccgctcgtggta 410
Score = 65.9 bits (33), Expect = 2e-009
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 510 cggaagtcgatcttgtgcgccacgccggccttctcgatcaccggc 554
|||||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 488 cggaagtccaccttgtgcgcgacgccggccttctcgatcaccggc 532
Score = 48.1 bits (24), Expect = 5e-004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 179 gacgcggcggcacagcgngagcccgtcggcgatgg 213
||||||||||||||||| || |||||||||||||
Sbjct: 183 gacgcggcggcacagcgtgacgccgtcggcgatgg 217
>gb|BJ549697.1|BJ549697 BJ549697 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28c08 3', mRNA sequence
Length = 422
Score = 71.9 bits (36), Expect = 3e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 345 gtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagccgctcgtggtag 404
|||||||||||| ||| |||||| |||||| ||| |||| || || ||||||||||||
Sbjct: 331 gtgttgtcgtagccgaggaggccgccgaccttgacgagcttcatgaggcgctcgtggtag 390
Query: 405 ttgaggaagttcaccttgtccgcgtccacgaa 436
|||||| |||| ||||||| |||||||||||
Sbjct: 391 ttgaggtagttgtccttgtcggcgtccacgaa 422
>gb|BI957613.1|BI957613 HVSMEn0010F23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F23f, mRNA sequence
Length = 654
Score = 67.9 bits (34), Expect = 5e-010
Identities = 74/86 (86%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 586 cgtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgag 645
||||||||||||| ||||||||||| |||||||| || || |||||| | |||||||||
Sbjct: 177 cgtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgag 119
Query: 646 tacccggtgaagacgccaacctcgat 671
|| || ||||| ||||| ||||||||
Sbjct: 118 tagcccgtgaacacgcccacctcgat 93
Score = 60.0 bits (30), Expect = 1e-007
Identities = 93/114 (81%)
Strand = Plus / Minus
Query: 333 ccgccccacagcgtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagc 392
|||||||| ||||||||||||||| |||| ||| ||||| | | |||| ||||||||
Sbjct: 427 ccgccccagagcgtgttgtcgtagatgatggtgccgccgacgcgcaccagccgcagcagc 368
Query: 393 cgctcgtggtagttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcg 446
||||||||||| | | |||| |||||| |||||||||||||||||||||
Sbjct: 367 tgctcgtggtagcgcacgtagttgggcttgtcggcgtccacgaacgcgaagtcg 314
Score = 42.1 bits (21), Expect = 0.028
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 523 tgtgcgccacgccggccttctcgat 547
||||||||| |||||||||||||||
Sbjct: 237 tgtgcgccatgccggccttctcgat 213
>gb|BI960085.1|BI960085 HVSMEn0023C11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023C11f, mRNA sequence
Length = 716
Score = 67.9 bits (34), Expect = 5e-010
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 325 ccacggacccgccccacagcgtgttgtcgtaggcgatg 362
|||||||||||||||| |||||||||||||||||||||
Sbjct: 676 ccacggacccgccccagagcgtgttgtcgtaggcgatg 639
Score = 65.9 bits (33), Expect = 2e-009
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 510 cggaagtcgatcttgtgcgccacgccggccttctcgatcaccggc 554
|||||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 485 cggaagtccaccttgtgcgcgacgccggccttctcgatcaccggc 441
Score = 56.0 bits (28), Expect = 2e-006
Identities = 71/84 (84%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 588 tcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagta 647
||||| ||||| | ||||||| || ||||||||||||| |||| | |||||| |||||
Sbjct: 410 tcgatcgccaccaccttgccgccggcggggagggcgagagcggcggt-gagcagtgagta 352
Query: 648 cccggtgaagacgccaacctcgat 671
|||||||||||||| ||||||||
Sbjct: 351 tccggtgaagacgccgacctcgat 328
>gb|AL450922.1|AL450922 AL450922 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05A17u 5', mRNA sequence
Length = 520
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 312 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 254
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 253 agcccgtgaacacgcccacctcgat 229
Score = 44.1 bits (22), Expect = 0.007
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 510 cggaagtcgatcttgtgcgccacgccggccttct 543
|||||||| | ||||||||||| |||||||||||
Sbjct: 387 cggaagtccaccttgtgcgccatgccggccttct 354
>gb|AL503249.1|AL503249 AL503249 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01E24T 5', mRNA sequence
Length = 700
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 388 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 330
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 329 agcccgtgaacacgcccacctcgat 305
Score = 60.0 bits (30), Expect = 1e-007
Identities = 93/114 (81%)
Strand = Plus / Minus
Query: 333 ccgccccacagcgtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagc 392
|||||||| ||||||||||||||| |||| ||| ||||| | | |||| ||||||||
Sbjct: 639 ccgccccagagcgtgttgtcgtagatgatggtgccgccgacgcgcaccagccgcagcagc 580
Query: 393 cgctcgtggtagttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcg 446
||||||||||| | | |||| |||||| |||||||||||||||||||||
Sbjct: 579 tgctcgtggtagcgcacgtagttgggcttgtcggcgtccacgaacgcgaagtcg 526
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 464 cgcggaagtccaccttgtgcgccatgccggccttctcgat 425
>gb|AL504625.1|AL504625 AL504625 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05N15V 5', mRNA sequence
Length = 666
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 379 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 321
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 320 agcccgtgaacacgcccacctcgat 296
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 455 cgcggaagtccaccttgtgcgccatgccggccttctcgat 416
Score = 48.1 bits (24), Expect = 5e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 419 cttgtccgcgtccacgaacgcgaagtcg 446
|||||| |||||||||||||||||||||
Sbjct: 544 cttgtcggcgtccacgaacgcgaagtcg 517
>gb|AL505702.1|AL505702 AL505702 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09E08V 5', mRNA sequence
Length = 500
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 401 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 343
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 342 agcccgtgaacacgcccacctcgat 318
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 477 cgcggaagtccaccttgtgcgccatgccggccttctcgat 438
>gb|BF624013.2|BF624013 HVSMEa0008J18f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0008J18f, mRNA sequence
Length = 508
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 388 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 330
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 329 agcccgtgaacacgcccacctcgat 305
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 464 cgcggaagtccaccttgtgcgccatgccggccttctcgat 425
>gb|BF624054.2|BF624054 HVSMEa0009A08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0009A08f, mRNA sequence
Length = 804
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 395 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 337
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 336 agcccgtgaacacgcccacctcgat 312
Score = 60.0 bits (30), Expect = 1e-007
Identities = 93/114 (81%)
Strand = Plus / Minus
Query: 333 ccgccccacagcgtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagc 392
|||||||| ||||||||||||||| |||| ||| ||||| | | |||| ||||||||
Sbjct: 646 ccgccccagagcgtgttgtcgtagatgatggtgccgccgacgcgcaccagccgcagcagc 587
Query: 393 cgctcgtggtagttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcg 446
||||||||||| | | |||| |||||| |||||||||||||||||||||
Sbjct: 586 tgctcgtggtagcgcacgtagttgggcttgtcggcgtccacgaacgcgaagtcg 533
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 471 cgcggaagtccaccttgtgcgccatgccggccttctcgat 432
>gb|BF625981.2|BF625981 HVSMEa0015B13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015B13f, mRNA sequence
Length = 706
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 385 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 327
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 326 agcccgtgaacacgcccacctcgat 302
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 461 cgcggaagtccaccttgtgcgccatgccggccttctcgat 422
Score = 48.1 bits (24), Expect = 5e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 419 cttgtccgcgtccacgaacgcgaagtcg 446
|||||| |||||||||||||||||||||
Sbjct: 550 cttgtcggcgtccacgaacgcgaagtcg 523
>gb|BF626523.2|BF626523 HVSMEa0018K06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0018K06f, mRNA sequence
Length = 749
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 380 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 322
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 321 agcccgtgaacacgcccacctcgat 297
Score = 60.0 bits (30), Expect = 1e-007
Identities = 93/114 (81%)
Strand = Plus / Minus
Query: 333 ccgccccacagcgtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagc 392
|||||||| ||||||||||||||| |||| ||| ||||| | | |||| ||||||||
Sbjct: 631 ccgccccagagcgtgttgtcgtagatgatggtgccgccgacgcgcaccagccgcagcagc 572
Query: 393 cgctcgtggtagttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcg 446
||||||||||| | | |||| |||||| |||||||||||||||||||||
Sbjct: 571 tgctcgtggtagcgcacgtagttgggcttgtcggcgtccacgaacgcgaagtcg 518
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 456 cgcggaagtccaccttgtgcgccatgccggccttctcgat 417
>gb|BG299397.1|BG299397 HVSMEa0019M12f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0019M12f, mRNA sequence
Length = 627
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 395 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 337
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 336 agcccgtgaacacgcccacctcgat 312
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 471 cgcggaagtccaccttgtgcgccatgccggccttctcgat 432
Score = 48.1 bits (24), Expect = 5e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 419 cttgtccgcgtccacgaacgcgaagtcg 446
|||||| |||||||||||||||||||||
Sbjct: 560 cttgtcggcgtccacgaacgcgaagtcg 533
>gb|BF630744.2|BF630744 HVSMEb0013N02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0013N02f, mRNA sequence
Length = 756
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 145 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 87
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 86 agcccgtgaacacgcccacctcgat 62
Score = 60.0 bits (30), Expect = 1e-007
Identities = 93/114 (81%)
Strand = Plus / Minus
Query: 333 ccgccccacagcgtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagc 392
|||||||| ||||||||||||||| |||| ||| ||||| | | |||| ||||||||
Sbjct: 396 ccgccccagagcgtgttgtcgtagatgatggtgccgccgacgcgcaccagccgcagcagc 337
Query: 393 cgctcgtggtagttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcg 446
||||||||||| | | |||| |||||| |||||||||||||||||||||
Sbjct: 336 tgctcgtggtagcgcacgtagttgggcttgtcggcgtccacgaacgcgaagtcg 283
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 221 cgcggaagtccaccttgtgcgccatgccggccttctcgat 182
Score = 44.1 bits (22), Expect = 0.007
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 178 cgacgcggcggcacagcgngagcccgtcggcgatggcgacctggcagac 226
||||||||||||| | | || |||||||||||||||| |||||||||
Sbjct: 551 cgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagac 503
>gb|BG300054.1|BG300054 HVSMEb0011D09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011D09f, mRNA sequence
Length = 518
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 105 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 47
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 46 agcccgtgaacacgcccacctcgat 22
Score = 60.0 bits (30), Expect = 1e-007
Identities = 93/114 (81%)
Strand = Plus / Minus
Query: 333 ccgccccacagcgtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagc 392
|||||||| ||||||||||||||| |||| ||| ||||| | | |||| ||||||||
Sbjct: 356 ccgccccagagcgtgttgtcgtagatgatggtgccgccgacgcgcaccagccgcagcagc 297
Query: 393 cgctcgtggtagttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcg 446
||||||||||| | | |||| |||||| |||||||||||||||||||||
Sbjct: 296 tgctcgtggtagcgcacgtagttgggcttgtcggcgtccacgaacgcgaagtcg 243
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 181 cgcggaagtccaccttgtgcgccatgccggccttctcgat 142
Score = 40.1 bits (20), Expect = 0.11
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 203 gtcggcgatggcgacctggcagac 226
|||||||||||||| |||||||||
Sbjct: 486 gtcggcgatggcgagctggcagac 463
>gb|BF259949.2|BF259949 HVSMEf0020L06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020L06f, mRNA sequence
Length = 807
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 380 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 322
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 321 agcccgtgaacacgcccacctcgat 297
Score = 48.1 bits (24), Expect = 5e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | |||||||||| |||||||||||||||
Sbjct: 456 cgcggaagtccactttgtgcgccatgccggccttctcgat 417
Score = 40.1 bits (20), Expect = 0.11
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 332 cccgccccacagcgtgttgtcgta 355
||||||||| ||||||||||||||
Sbjct: 632 cccgccccagagcgtgttgtcgta 609
Score = 40.1 bits (20), Expect = 0.11
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 419 cttgtccgcgtccacgaacgcgaagtcg 446
|||||| ||||| |||||||||||||||
Sbjct: 545 cttgtcggcgtcaacgaacgcgaagtcg 518
>gb|BI953073.1|BI953073 HVSMEm0009M16f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0009M16f, mRNA sequence
Length = 442
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 391 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 333
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 332 agcccgtgaacacgcccacctcgat 308
>gb|BI953755.1|BI953755 HVSMEm0014D01f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0014D01f, mRNA sequence
Length = 625
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 361 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 303
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 302 agcccgtgaacacgcccacctcgat 278
>gb|BI954845.1|BI954845 HVSMEm0020A17f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0020A17f, mRNA sequence
Length = 662
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 385 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 327
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 326 agcccgtgaacacgcccacctcgat 302
Score = 44.1 bits (22), Expect = 0.007
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 511 ggaagtcgatcttgtgcgccacgccggccttctc 544
||||||| | |||||||||||||||||| |||||
Sbjct: 458 ggaagtccaccttgtgcgccacgccggctttctc 425
>gb|BI955535.1|BI955535 HVSMEm0023H22f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0023H22f, mRNA sequence
Length = 597
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 383 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 325
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 324 agcccgtgaacacgcccacctcgat 300
Score = 44.1 bits (22), Expect = 0.007
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 511 ggaagtcgatcttgtgcgccacgccggccttctcgat 547
||||||| | ||||||||||| ||||||||||| |||
Sbjct: 456 ggaagtccaccttgtgcgccatgccggccttctngat 420
>gb|BI956370.1|BI956370 HVSMEn0002O21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0002O21f, mRNA sequence
Length = 455
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 376 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 318
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 317 agcccgtgaacacgcccacctcgat 293
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 452 cgcggaagtccaccttgtgcgccatgccggccttctcgat 413
>gb|BI956521.1|BI956521 HVSMEn0003O13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003O13f, mRNA sequence
Length = 453
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 388 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 330
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 329 agcccgtgaacacgcccacctcgat 305
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 521 cttgtgcgccacgccggccttctcgat 547
||||||||||| |||||||||||||||
Sbjct: 451 cttgtgcgccatgccggccttctcgat 425
>gb|BI956671.1|BI956671 HVSMEn0004L02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004L02f, mRNA sequence
Length = 803
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 388 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 330
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 329 agcccgtgaacacgcccacctcgat 305
Score = 40.1 bits (20), Expect = 0.11
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||| ||||| | ||||||||||| ||||||||| |||||
Sbjct: 464 cgcgtaagtccaccttgtgcgccatgccggccttttcgat 425
>gb|BI956791.1|BI956791 HVSMEn0005F21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005F21f, mRNA sequence
Length = 930
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 388 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 330
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 329 agcccgtgaacacgcccacctcgat 305
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 464 cgcggaagtccaccttgtgcgccatgccggccttctcgat 425
Score = 48.1 bits (24), Expect = 5e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 419 cttgtccgcgtccacgaacgcgaagtcg 446
|||||| |||||||||||||||||||||
Sbjct: 553 cttgtcggcgtccacgaacgcgaagtcg 526
>gb|BI957447.1|BI957447 HVSMEn0009J18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009J18f, mRNA sequence
Length = 667
Score = 65.9 bits (33), Expect = 2e-009
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 587 gtcgatggccacaatcttgccgtcgtcggggagggcgagggcggtgaacgagcagcgagt 646
|||||||||||| ||||||||||| |||||||| || || |||||| | ||||||||||
Sbjct: 138 gtcgatggccacgatcttgccgtcctcggggagcgccagcgcggtg-gccagcagcgagt 80
Query: 647 acccggtgaagacgccaacctcgat 671
| || ||||| ||||| ||||||||
Sbjct: 79 agcccgtgaacacgcccacctcgat 55
Score = 60.0 bits (30), Expect = 1e-007
Identities = 93/114 (81%)
Strand = Plus / Minus
Query: 333 ccgccccacagcgtgttgtcgtaggcgatgaggcccccgaccctgagcagctgcagcagc 392
|||||||| ||||||||||||||| |||| ||| ||||| | | |||| ||||||||
Sbjct: 389 ccgccccagagcgtgttgtcgtagatgatggtgccgccgacgcgcaccagccgcagcagc 330
Query: 393 cgctcgtggtagttgaggaagttcaccttgtccgcgtccacgaacgcgaagtcg 446
||||||||||| | | |||| |||||| |||||||||||||||||||||
Sbjct: 329 tgctcgtggtagcgcacgtagttgggcttgtcggcgtccacgaacgcgaagtcg 276
Score = 56.0 bits (28), Expect = 2e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 508 cgcggaagtcgatcttgtgcgccacgccggccttctcgat 547
|||||||||| | ||||||||||| |||||||||||||||
Sbjct: 214 cgcggaagtccaccttgtgcgccatgccggccttctcgat 175
Score = 44.1 bits (22), Expect = 0.007
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 178 cgacgcggcggcacagcgngagcccgtcggcgatggcgacctggcagac 226
||||||||||||| | | || |||||||||||||||| |||||||||
Sbjct: 544 cgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagac 496
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 126,586
Number of Sequences: 312970
Number of extensions: 126586
Number of successful extensions: 50132
Number of sequences better than 0.5: 207
Number of HSP's better than 0.5 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49337
Number of HSP's gapped (non-prelim): 651
length of query: 819
length of database: 175,134,539
effective HSP length: 19
effective length of query: 800
effective length of database: 169,188,109
effective search space: 135350487200
effective search space used: 135350487200
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)