BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542159.2.1
(1231 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV054680.1|CV054680 BNEL112b2 Barley EST endosperm libra... 559 e-158
gb|CK122833.1|CK122833 BES1824106b12 BES1824 Hordeum vulgar... 557 e-157
gb|CV058623.1|CV058623 BNEL3A6 Barley EST endosperm library... 531 e-149
gb|CA025997.1|CA025997 HZ53M10r HZ Hordeum vulgare subsp. v... 515 e-144
gb|BJ453194.1|BJ453194 BJ453194 K. Sato unpublished cDNA li... 498 e-139
gb|BU999664.1|BU999664 HI15E06r HI Hordeum vulgare subsp. v... 498 e-139
gb|BF628899.2|BF628899 HVSMEb0009C03f Hordeum vulgare seedl... 482 e-134
gb|AL506182.1|AL506182 AL506182 Hordeum vulgare Barke devel... 476 e-133
gb|BG344957.1|BG344957 HVSMEg0018A19f Hordeum vulgare pre-a... 462 e-128
gb|BF064660.2|BF064660 HV_CEb0016M11f Hordeum vulgare seedl... 458 e-127
gb|BU981309.1|BU981309 HA23D21r HA Hordeum vulgare subsp. v... 454 e-126
gb|BQ460776.1|BQ460776 HA05P11r HA Hordeum vulgare subsp. v... 444 e-123
gb|BF255517.3|BF255517 HVSMEf0007B04f Hordeum vulgare seedl... 418 e-115
gb|CK123091.1|CK123091 BES1824102b07 BES1824 Hordeum vulgar... 412 e-113
gb|CK125072.1|CK125072 BES1824106i12 BES1824 Hordeum vulgar... 398 e-109
gb|CA008510.1|CA008510 HU11D01r HU Hordeum vulgare subsp. v... 391 e-107
gb|BJ460743.1|BJ460743 BJ460743 K. Sato unpublished cDNA li... 389 e-106
gb|BM099190.2|BM099190 EBes01_SQ002_H21_R embryo sac, 4-6 D... 379 e-103
gb|BM369508.2|BM369508 EBem07_SQ003_M17_R embryo, 28 DPA, n... 363 9e-099
gb|AL505462.1|AL505462 AL505462 Hordeum vulgare Barke roots... 355 2e-096
gb|BQ471183.1|BQ471183 HV01H06T HV Hordeum vulgare subsp. v... 355 2e-096
gb|BU981802.1|BU981802 HA24K23r HA Hordeum vulgare subsp. v... 355 2e-096
gb|CA015435.1|CA015435 HT14E23r HT Hordeum vulgare subsp. v... 355 2e-096
gb|CK123056.1|CK123056 BES1824101p18 BES1824 Hordeum vulgar... 355 2e-096
gb|BQ465083.1|BQ465083 HU02J14r HU Hordeum vulgare subsp. v... 351 3e-095
gb|BF621259.1|BF621259 HVSMEa0006D21f Hordeum vulgare seedl... 347 5e-094
gb|BJ549410.1|BJ549410 BJ549410 K. Sato unpublished cDNA li... 347 5e-094
gb|AL503495.1|AL503495 AL503495 Hordeum vulgare Barke roots... 343 8e-093
gb|CK123982.1|CK123982 BES1824106f18 BES1824 Hordeum vulgar... 341 3e-092
gb|CA025362.1|CA025362 HZ51P06r HZ Hordeum vulgare subsp. v... 337 5e-091
gb|BG343229.2|BG343229 HVSMEg0005C16f Hordeum vulgare pre-a... 331 3e-089
gb|AV915094.1|AV915094 AV915094 K. Sato unpublished cDNA li... 331 3e-089
gb|AV915117.1|AV915117 AV915117 K. Sato unpublished cDNA li... 331 3e-089
gb|BU983729.1|BU983729 HA30N16r HA Hordeum vulgare subsp. v... 331 3e-089
gb|BU986184.1|BU986184 HF09O20r HF Hordeum vulgare subsp. v... 331 3e-089
gb|BG344397.1|BG344397 HVSMEg0009C10f Hordeum vulgare pre-a... 329 1e-088
gb|BG416499.1|BG416499 HVSMEk0012J14f Hordeum vulgare testa... 325 2e-087
gb|BE060748.3|BE060748 HVSMEg0013D16f Hordeum vulgare pre-a... 325 2e-087
gb|BU976147.1|BU976147 HA03D15r HA Hordeum vulgare subsp. v... 317 5e-085
gb|BU987698.1|BU987698 HF15I04r HF Hordeum vulgare subsp. v... 317 5e-085
gb|BQ460449.1|BQ460449 HA09J24r HA Hordeum vulgare subsp. v... 305 2e-081
gb|BU980268.1|BU980268 HA20C21r HA Hordeum vulgare subsp. v... 305 2e-081
gb|CA032624.1|CA032624 HX13L05r HX Hordeum vulgare subsp. v... 305 2e-081
gb|CB882493.1|CB882493 HL02A08w HL Hordeum vulgare subsp. v... 305 2e-081
gb|BE193863.2|BE193863 HVSMEh0082L19f Hordeum vulgare 5-45 ... 303 7e-081
gb|BE060252.3|BE060252 HVSMEg0011L20f Hordeum vulgare pre-a... 303 7e-081
gb|BQ465827.1|BQ465827 HU04M21r HU Hordeum vulgare subsp. v... 289 1e-076
gb|CA025118.1|CA025118 HZ51E05r HZ Hordeum vulgare subsp. v... 289 1e-076
gb|CA025207.1|CA025207 HZ51I05r HZ Hordeum vulgare subsp. v... 289 1e-076
gb|CA029545.1|CA029545 HZ65I11r HZ Hordeum vulgare subsp. v... 289 1e-076
gb|CA029693.1|CA029693 HZ65O24r HZ Hordeum vulgare subsp. v... 289 1e-076
gb|BI780955.2|BI780955 EBma05_SQ001_K18_R maternal, 12 DPA,... 285 2e-075
gb|BM096569.2|BM096569 EBma05_SQ001_M03_R maternal, 12 DPA,... 285 2e-075
gb|CA025053.1|CA025053 HZ51B09r HZ Hordeum vulgare subsp. v... 285 2e-075
gb|BM100789.2|BM100789 EBpi01_SQ002_A02_R pistil, 1 DPA, no... 278 4e-073
gb|BG365123.1|BG365123 HVSMEi0001G06f Hordeum vulgare 20 DA... 272 3e-071
gb|BQ472055.1|BQ472055 HV04E13r HV Hordeum vulgare subsp. v... 272 3e-071
gb|BJ549142.1|BJ549142 BJ549142 K. Sato unpublished cDNA li... 270 1e-070
gb|CA022625.1|CA022625 HZ43O03r HZ Hordeum vulgare subsp. v... 268 4e-070
gb|CA027157.1|CA027157 HZ58B02r HZ Hordeum vulgare subsp. v... 268 4e-070
gb|BQ757832.1|BQ757832 EBem10_SQ005_F23_R embryo, 2 Day ger... 258 4e-067
gb|CA028967.1|CA028967 HZ63M09r HZ Hordeum vulgare subsp. v... 258 4e-067
gb|BJ549849.1|BJ549849 BJ549849 K. Sato unpublished cDNA li... 256 2e-066
gb|BE411215.1|BE411215 ISC003.C05F990525 ITEC ISC Barley Le... 254 6e-066
gb|BI953063.1|BI953063 HVSMEm0009K24f Hordeum vulgare green... 252 2e-065
gb|CA027607.1|CA027607 HZ59H09r HZ Hordeum vulgare subsp. v... 252 2e-065
gb|BE411202.1|BE411202 ISC003.B04F990525 ITEC ISC Barley Le... 250 9e-065
gb|BG369037.2|BG369037 HVSMEi0022I07f Hordeum vulgare 20 DA... 250 9e-065
gb|BG344285.1|BG344285 HVSMEg0008J07f Hordeum vulgare pre-a... 242 2e-062
gb|BI955579.1|BI955579 HVSMEm0023K08f Hordeum vulgare green... 240 9e-062
gb|BI779267.2|BI779267 EBro01_SQ003_I02_R root, 3 week, hyd... 240 9e-062
gb|BU979830.1|BU979830 HA17G20r HA Hordeum vulgare subsp. v... 234 6e-060
gb|BE216450.2|BE216450 HV_CEb0010I11f Hordeum vulgare seedl... 226 1e-057
gb|AV920228.1|AV920228 AV920228 K. Sato unpublished cDNA li... 212 2e-053
gb|AV920250.1|AV920250 AV920250 K. Sato unpublished cDNA li... 212 2e-053
gb|BF065589.2|BF065589 HV_CEb0012N18f Hordeum vulgare seedl... 196 1e-048
gb|AV917497.1|AV917497 AV917497 K. Sato unpublished cDNA li... 184 5e-045
gb|AL500907.1|AL500907 AL500907 Hordeum vulgare Barke roots... 172 2e-041
gb|BI777080.2|BI777080 EBpi03_SQ001_N10_R pistil, 4 DPA, no... 168 3e-040
gb|AJ434631.1|AJ434631 AJ434631 S00002 Hordeum vulgare subs... 167 1e-039
gb|BJ549610.1|BJ549610 BJ549610 K. Sato unpublished cDNA li... 167 1e-039
gb|BJ465487.1|BJ465487 BJ465487 K. Sato unpublished cDNA li... 165 4e-039
gb|BE411848.1|BE411848 ISC009.H07F990902 ITEC ISC Barley Le... 161 7e-038
gb|BF255589.3|BF255589 HVSMEf0007E08f Hordeum vulgare seedl... 161 7e-038
gb|BM098158.2|BM098158 EBpi03_SQ002_L10_R pistil, 4 DPA, no... 161 7e-038
gb|BU995651.1|BU995651 HM10O19r HM Hordeum vulgare subsp. v... 161 7e-038
gb|CB881803.1|CB881803 HM10O19w HM Hordeum vulgare subsp. v... 161 7e-038
gb|AL450920.1|AL450920 AL450920 Hordeum vulgare Barke etiol... 151 6e-035
gb|BF267097.2|BF267097 HV_CEa0016P01f Hordeum vulgare seedl... 151 6e-035
gb|BQ664053.1|BQ664053 HV01H06w HV Hordeum vulgare subsp. v... 151 6e-035
gb|AL509600.1|AL509600 AL509600 Hordeum vulgare Barke devel... 149 3e-034
gb|AL500133.1|AL500133 AL500133 Hordeum vulgare Barke etiol... 145 4e-033
gb|CV062611.1|CV062611 BNEL81a1 Barley EST endosperm librar... 139 2e-031
gb|BJ467628.1|BJ467628 BJ467628 K. Sato unpublished cDNA li... 131 6e-029
gb|AJ463546.1|AJ463546 AJ463546 S00002 Hordeum vulgare subs... 129 2e-028
gb|CA015415.1|CA015415 HT14D20r HT Hordeum vulgare subsp. v... 129 2e-028
gb|CA005290.1|CA005290 HU11D01u HU Hordeum vulgare subsp. v... 127 9e-028
gb|AL502727.1|AL502727 AL502727 Hordeum vulgare Barke roots... 123 1e-026
gb|BM376084.2|BM376084 EBma01_SQ002_E21_R maternal, 4 DPA, ... 123 1e-026
gb|AJ435114.1|AJ435114 AJ435114 S00002 Hordeum vulgare subs... 117 9e-025
gb|BQ663963.1|BQ663963 HU04M21u HU Hordeum vulgare subsp. v... 117 9e-025
gb|BU989147.1|BU989147 HF19P01r HF Hordeum vulgare subsp. v... 111 6e-023
gb|BQ657113.1|BQ657113 HA09J24u HA Hordeum vulgare subsp. v... 109 2e-022
gb|BQ664645.1|BQ664645 HV04E13u HV Hordeum vulgare subsp. v... 96 3e-018
gb|BF255601.2|BF255601 HVSMEf0007E20f Hordeum vulgare seedl... 94 1e-017
gb|BU969980.1|BU969980 HB13D16r BC Hordeum vulgare subsp. v... 94 1e-017
gb|BQ663426.1|BQ663426 HU02J14u HU Hordeum vulgare subsp. v... 92 5e-017
gb|AJ436435.1|AJ436435 AJ436435 S00002 Hordeum vulgare subs... 80 2e-013
gb|BI960687.1|BI960687 HVSMEn0025N13f Hordeum vulgare rachi... 60 2e-007
gb|BF629933.2|BF629933 HVSMEb0007F22f Hordeum vulgare seedl... 54 1e-005
gb|BI778853.1|BI778853 EBro01_SQ001_M06_R root, 3 week, hyd... 52 4e-005
gb|AL508889.1|AL508889 AL508889 Hordeum vulgare Barke devel... 50 2e-004
gb|CA027973.1|CA027973 HZ60J18r HZ Hordeum vulgare subsp. v... 50 2e-004
gb|CK122971.1|CK122971 BES1824101i13 BES1824 Hordeum vulgar... 50 2e-004
gb|BM372383.2|BM372383 EBro03_SQ004_M21_R root, 3 week, wat... 46 0.003
gb|CA012275.1|CA012275 HT04P09r HT Hordeum vulgare subsp. v... 44 0.011
gb|CB879321.1|CB879321 HP11L22T HP Hordeum vulgare subsp. v... 44 0.011
gb|AL509132.1|AL509132 AL509132 Hordeum vulgare Barke devel... 42 0.043
gb|BF618727.1|BF618727 HVSMEc0007I09f Hordeum vulgare seedl... 42 0.043
gb|BG366686.1|BG366686 HVSMEi0007N21f Hordeum vulgare 20 DA... 42 0.043
gb|BE519644.1|BE519644 HV_CEb0016P16f Hordeum vulgare seedl... 42 0.043
gb|AV913322.1|AV913322 AV913322 K. Sato unpublished cDNA li... 42 0.043
gb|AV934101.1|AV934101 AV934101 K. Sato unpublished cDNA li... 42 0.043
gb|AV934387.1|AV934387 AV934387 K. Sato unpublished cDNA li... 42 0.043
gb|BJ464172.1|BJ464172 BJ464172 K. Sato unpublished cDNA li... 42 0.043
gb|BJ472664.1|BJ472664 BJ472664 K. Sato unpublished cDNA li... 42 0.043
gb|BJ473182.1|BJ473182 BJ473182 K. Sato unpublished cDNA li... 42 0.043
gb|BJ473318.1|BJ473318 BJ473318 K. Sato unpublished cDNA li... 42 0.043
gb|BU974524.1|BU974524 HB28D05r BC Hordeum vulgare subsp. v... 42 0.043
gb|BU976965.1|BU976965 HA10J22r HA Hordeum vulgare subsp. v... 42 0.043
gb|BU982170.1|BU982170 HA25L14r HA Hordeum vulgare subsp. v... 42 0.043
gb|BU984851.1|BU984851 HF05D21r HF Hordeum vulgare subsp. v... 42 0.043
gb|CA007896.1|CA007896 HU09F03r HU Hordeum vulgare subsp. v... 42 0.043
gb|CA008169.1|CA008169 HU10B18r HU Hordeum vulgare subsp. v... 42 0.043
gb|CA013437.1|CA013437 HT08H06r HT Hordeum vulgare subsp. v... 42 0.043
gb|CK123897.1|CK123897 BES1824105p07 BES1824 Hordeum vulgar... 42 0.043
gb|BF256385.2|BF256385 HVSMEf0009H08f Hordeum vulgare seedl... 40 0.17
gb|BF256831.2|BF256831 HVSMEf0011C04f Hordeum vulgare seedl... 40 0.17
gb|BG343530.1|BG343530 HVSMEg0006E21f Hordeum vulgare pre-a... 40 0.17
gb|BI954196.1|BI954196 HVSMEm0016J08f Hordeum vulgare green... 40 0.17
gb|BF257865.3|BF257865 HVSMEf0014B07f Hordeum vulgare seedl... 40 0.17
gb|BG345125.2|BG345125 HVSMEg0018M17f Hordeum vulgare pre-a... 40 0.17
gb|AJ462606.1|AJ462606 AJ462606 S00002 Hordeum vulgare subs... 40 0.17
gb|AJ462731.1|AJ462731 AJ462731 S00002 Hordeum vulgare subs... 40 0.17
gb|BQ466478.1|BQ466478 HT02K10r HT Hordeum vulgare subsp. v... 40 0.17
gb|BQ662704.1|BQ662704 HS03N07u HS Hordeum vulgare subsp. v... 40 0.17
gb|BM371938.2|BM371938 EBma08_SQ004_H09_R maternal, 28 DPA,... 40 0.17
gb|BI777150.2|BI777150 EBro03_SQ002_C17_R root, 3 week, wat... 40 0.17
gb|BM372417.2|BM372417 EBro03_SQ004_O09_R root, 3 week, wat... 40 0.17
gb|BM370155.2|BM370155 EBro08_SQ003_C15_R root, 3 week, dro... 40 0.17
gb|BQ753900.1|BQ753900 EBca01_SQ002_D10_R carpel, pre-anthe... 40 0.17
gb|BQ760808.1|BQ760808 EBro03_SQ003_I14_R root, 3 week, wat... 40 0.17
gb|BQ762487.1|BQ762487 EBro02_SQ004_C04_R root, 3 week, hyd... 40 0.17
gb|BU978635.1|BU978635 HA13N01r HA Hordeum vulgare subsp. v... 40 0.17
gb|BU979428.1|BU979428 HA16C04r HA Hordeum vulgare subsp. v... 40 0.17
gb|BU983490.1|BU983490 HA29O16r HA Hordeum vulgare subsp. v... 40 0.17
gb|BU994014.1|BU994014 HM05G08r HM Hordeum vulgare subsp. v... 40 0.17
gb|BU996894.1|BU996894 HI06D17r HI Hordeum vulgare subsp. v... 40 0.17
gb|CA023555.1|CA023555 HZ46K04r HZ Hordeum vulgare subsp. v... 40 0.17
gb|CB880132.1|CB880132 HM05J13w HM Hordeum vulgare subsp. v... 40 0.17
gb|CB881537.1|CB881537 HM10B21w HM Hordeum vulgare subsp. v... 40 0.17
>gb|CV054680.1|CV054680 BNEL112b2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL112b2 5' similar to putative
ras-like small GTP binding ptotein, mRNA sequence
Length = 707
Score = 559 bits (282), Expect = e-158
Identities = 513/586 (87%), Gaps = 3/586 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 78 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 137
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 138 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 197
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 198 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 257
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 258 gcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgag 317
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 318 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 377
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
||||||| ||||| ||||| |||||||||||||| | |||||| ||||||||||||| |
Sbjct: 378 aggaacggtttgcagagtctaagaaggagctcgacggccttctttcagatgactccctgg 437
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacat-cccatacgcggcttcagag 565
| || || ||||||||| ||||||| |||||||||||||| ||||| ||| || || |||
Sbjct: 438 cgaatgtgcctttcctcgtactgggtaacaagattgacatacccat-cgcagcatctgag 496
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|||||||| | |||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 497 gaggagctccgctactaccttgggctgagcaacttcaccactgggaagggcaacgtgaac 556
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
||| | || || || || |||||||| ||| | ||||||||||| | || |||||||||
Sbjct: 557 ttgtcggattcaaacgtgcggccccttgaggtgttcatgtgcagcatcgtccgcaagatg 616
Query: 686 ggctatggcgaaggcttcaaatggatgtctcagtacatcaagtgag 731
|||||||| | ||| |||||||||||||| ||||||||||||||||
Sbjct: 617 ggctatggag-aggtttcaaatggatgtcccagtacatcaagtgag 661
>gb|CK122833.1|CK122833 BES1824106b12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B126 5-PRIME, mRNA sequence
Length = 745
Score = 557 bits (281), Expect = e-157
Identities = 515/588 (87%), Gaps = 4/588 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 112 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 171
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 172 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 231
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 232 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 291
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 292 gcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgag 351
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 352 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 411
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
||||||| ||||| ||||| |||||||||||||| | |||||| ||||||||||||| |
Sbjct: 412 aggaacggtttgcagagtctaagaaggagctcgacggccttctttcagatgactccctgg 471
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacat-cccatacgcggcttcagag 565
| || || ||||||||| ||||||| |||||||||||||| ||||| ||| || || |||
Sbjct: 472 cgaatgtgcctttcctcgtactgggtaacaagattgacatacccat-cgcagcatctgag 530
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|||||||| | |||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 531 gaggagctccgctactaccttgggctgagcaacttcaccactgggaagggcaacgtgaac 590
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
||| | || || || || |||||||||||| | ||||||||||| | || |||||||||
Sbjct: 591 ttgtcggattcaaacgtgcggcccctggaggtgttcatgtgcagcatcgtccgcaagatg 650
Query: 686 ggc-tatggc-gaaggcttcaaatggatgtctcagtacatcaagtgag 731
||| ||||| ||||| |||||||||||||| ||||||||||||||||
Sbjct: 651 ggcttatggnagaaggtttcaaatggatgtcccagtacatcaagtgag 698
>gb|CV058623.1|CV058623 BNEL3A6 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL3A6 5' similar to putative ras-like small
GTP binding ptotein, mRNA sequence
Length = 634
Score = 531 bits (268), Expect = e-149
Identities = 480/548 (87%), Gaps = 2/548 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 78 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 137
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 138 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 197
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 198 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 257
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 258 gcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgag 317
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 318 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 377
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
||||||| ||||| ||||| |||||||||||||| | |||||| ||||||||||||| |
Sbjct: 378 aggaacggtttgcagagtctaagaaggagctcgacggccttctttcagatgactccctgg 437
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacat-cccatacgcggcttcagag 565
| || || ||||||||| ||||||| |||||||||||||| ||||| ||| || || |||
Sbjct: 438 cgaatgtgcctttcctcgtactgggtaacaagattgacatacccat-cgcagcatctgag 496
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|||||||| | |||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 497 gaggagctccgctactaccttgggctgagcaacttcaccactgggaagggcaacgtgaac 556
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
||| | || || || || |||||||||||| | ||||||||||| | || |||||||||
Sbjct: 557 ttgtcggattcaaacgtgcggcccctggaggtgttcatgtgcagcatcgtccgcaagatg 616
Query: 686 ggctatgg 693
||||||||
Sbjct: 617 ggctatgg 624
>gb|CA025997.1|CA025997 HZ53M10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53M10
5-PRIME, mRNA sequence
Length = 622
Score = 515 bits (260), Expect = e-144
Identities = 460/524 (87%), Gaps = 2/524 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 84 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 143
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 144 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 203
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 204 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 263
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 264 gcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgag 323
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 324 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 383
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
||||||| ||||| ||||| |||||||||||||| | |||||| ||||||||||||| |
Sbjct: 384 aggaacggtttgcagagtctaagaaggagctcgacggccttctttcagatgactccctgg 443
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacat-cccatacgcggcttcagag 565
| || || ||||||||| ||||||| |||||||||||||| ||||| ||| || || |||
Sbjct: 444 cgaatgtgcctttcctcgtactgggtaacaagattgacatacccat-cgcagcatctgag 502
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|||||||| | |||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 503 gaggagctccgctactaccttgggctgagcaacttcaccactgggaagggcaacgtgaac 562
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcag 669
||| | || || || || |||||||||||| | |||||||||||
Sbjct: 563 ttgtcggattcaaacgtgcggcccctggaggtgttcatgtgcag 606
>gb|BJ453194.1|BJ453194 BJ453194 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42a17 5', mRNA sequence
Length = 674
Score = 498 bits (251), Expect = e-139
Identities = 427/483 (88%), Gaps = 2/483 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 172 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 231
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 232 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 291
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 292 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 351
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 352 gcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgag 411
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 412 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 471
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
||||||| ||||| ||||| |||||||||||||| | |||||| ||||||||||||| |
Sbjct: 472 aggaacggtttgcagagtctaagaaggagctcgacggccttctttcagatgactccctgg 531
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacat-cccatacgcggcttcagag 565
| || || ||||||||| ||||||| |||||||||||||| ||||| ||| || || |||
Sbjct: 532 cgaatgtgcctttcctcgtactgggtaacaagattgacatacccat-cgcagcatctgag 590
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|||||||| | |||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 591 gaggagctccgctactaccttgggctgagcaacttcaccactgggaagggcaacgtgaac 650
Query: 626 ttg 628
|||
Sbjct: 651 ttg 653
>gb|BU999664.1|BU999664 HI15E06r HI Hordeum vulgare subsp. vulgare cDNA clone HI15E06
5-PRIME, mRNA sequence
Length = 634
Score = 498 bits (251), Expect = e-139
Identities = 427/483 (88%), Gaps = 2/483 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 139 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 198
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 199 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 258
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 259 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 318
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 319 gcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgag 378
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 379 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 438
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
||||||| ||||| ||||| |||||||||||||| | |||||| ||||||||||||| |
Sbjct: 439 aggaacggtttgcagagtctaagaaggagctcgacggccttctttcagatgactccctgg 498
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacat-cccatacgcggcttcagag 565
| || || ||||||||| ||||||| |||||||||||||| ||||| ||| || || |||
Sbjct: 499 cgaatgtgcctttcctcgtactgggtaacaagattgacatacccat-cgcagcatctgag 557
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|||||||| | |||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 558 gaggagctccgctactaccttgggctgagcaacttcaccactgggaagggcaacgtgaac 617
Query: 626 ttg 628
|||
Sbjct: 618 ttg 620
>gb|BF628899.2|BF628899 HVSMEb0009C03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009C03f, mRNA sequence
Length = 773
Score = 482 bits (243), Expect = e-134
Identities = 419/475 (88%), Gaps = 2/475 (0%)
Strand = Plus / Plus
Query: 155 ctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaag 214
|||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| |||
Sbjct: 151 ctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaaggaggccaag 210
Query: 215 atcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggac 274
||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 211 atcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgctcaaggac 270
Query: 275 gagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggc 334
|||||||| || ||||||||||||||||||||||| ||||| || ||| ||||||||||
Sbjct: 271 gagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctgagcatcgga 330
Query: 335 aggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaag 394
||||||||||||| | ||||| || || |||||||||||||||||||| |||||||||
Sbjct: 331 cagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgagtctggaag 390
Query: 395 gactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgt 454
||||||||||||||||| ||||| ||||| ||||||||||| || | ||||||||||||
Sbjct: 391 gactactacgccaaggtggatgcggttgtttacttggtggacgccgctgacaaggaacgg 450
Query: 455 tttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgtt 514
||||| ||||| |||||||||||||| | |||||| ||||||||||||| || || ||
Sbjct: 451 tttgcagagtctaagaaggagctcgacggccttctttcagatgactccctggcgaatgtg 510
Query: 515 cctttcctcatactgggcaacaagattgacat-cccatacgcggcttcagaggaggagct 573
||||||||| ||||||| |||||||||||||| ||||| ||| || || |||||||||||
Sbjct: 511 cctttcctcgtactgggtaacaagattgacatacccat-cgcagcatctgaggaggagct 569
Query: 574 gaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttg 628
| |||||||| || |||||||||||||| || ||||| |||||||||||||||
Sbjct: 570 ccgctactaccttgggctgagcaacttcaccactgggaaaggcaacgtgaacttg 624
>gb|AL506182.1|AL506182 AL506182 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02E24T 5',
mRNA sequence
Length = 566
Score = 476 bits (240), Expect = e-133
Identities = 422/481 (87%), Gaps = 2/481 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 87 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 146
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 147 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 206
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 207 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 266
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 267 gcatcggacagatcaagttcaagaccttcgatctcggnggccaccagatcgcccgccgag 326
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 327 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 386
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
||||||| ||||| |||| || ||||||||||| | |||||| ||||||||||||| |
Sbjct: 387 aggaacggtttgcatagtctaanaaggagctcgacggccttctttcagatgactccctgg 446
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacat-cccatacgcggcttcagag 565
| || || ||||||||| ||||||| |||||||||||||| ||||| || || || |||
Sbjct: 447 cgaatgtgcctttcctcgtactgggtaacaagattgacatacccat-ngcagcatctgag 505
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|||||||| | |||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 506 gaggagctccgctactaccttgggctgagcaacttcaccactgggaagggcaacgtgaac 565
Query: 626 t 626
|
Sbjct: 566 t 566
>gb|BG344957.1|BG344957 HVSMEg0018A19f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018A19f, mRNA sequence
Length = 634
Score = 462 bits (233), Expect = e-128
Identities = 441/508 (86%), Gaps = 2/508 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 127 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 186
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 187 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 246
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 247 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 306
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 307 gcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgag 366
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 367 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 426
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
||||||| ||||| ||||| |||||||||||||| | |||||| ||||||||||||| |
Sbjct: 427 aggaacggtttgcagagtctaagaaggagctcgacggccttctttcagatgactccctgg 486
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacat-cccatacgcggcttcagag 565
| || || ||||||||| ||||||| |||||||||||||| ||||| ||| || || |||
Sbjct: 487 cgaatgtgcctttcctcgtactgggtaacaagattgacatacccat-cgcagcatctgag 545
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|||||||| | |||||||| | ||||| ||||||| || |||||||| ||||||||
Sbjct: 546 gaggagctccgctactacctttggctgagncacttcaccactgggaaggggcacgtgaac 605
Query: 626 ttggccgactccaatgtccggcccctgg 653
||| | || || || || ||||||||||
Sbjct: 606 ttgtcggattcaaacgtgcggcccctgg 633
>gb|BF064660.2|BF064660 HV_CEb0016M11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016M11f, mRNA sequence
Length = 591
Score = 458 bits (231), Expect = e-127
Identities = 420/479 (87%), Gaps = 3/479 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 112 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 171
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 172 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 231
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 232 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 291
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 292 gcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgag 351
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 352 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 411
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
||||||| ||||| ||||| |||||||||||||| | |||||| ||||||||||||| |
Sbjct: 412 aggaacggtttgcagagtctaagaaggagctcgacggccttctttcagatgactccctgg 471
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacat-cccatacgcggcttcagag 565
| || || ||||||||| ||||||| |||||||||||||| ||||| ||| || || ||
Sbjct: 472 cgaatgtgcctttcctcgtactgggtaacaagattgacatacccat-cgcagcatctgat 530
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaa-gggcaacgtga 623
|||||||| | |||||||| | |||||||||||||| || ||||| |||||||||||
Sbjct: 531 gaggagctccgctactaccttgtgctgagcaacttcaccactgggaaggggcaacgtga 589
>gb|BU981309.1|BU981309 HA23D21r HA Hordeum vulgare subsp. vulgare cDNA clone HA23D21
5-PRIME, mRNA sequence
Length = 486
Score = 454 bits (229), Expect = e-126
Identities = 414/473 (87%), Gaps = 2/473 (0%)
Strand = Plus / Plus
Query: 198 ggcagaaggaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcc 257
||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 11 ggcagaaggaggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcc 70
Query: 258 tccacatgctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcag 317
|||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| |
Sbjct: 71 tccacatgctcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcgg 130
Query: 318 aagagttgagcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcg 377
| ||| |||||||||| ||||||||||||| | ||||| || || |||||||||||||
Sbjct: 131 aggagctgagcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcg 190
Query: 378 cccgccgcgtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatg 437
||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 191 cccgccgagtctggaaggactactacgccaaggtggatgcggttgtttacttggtggacg 250
Query: 438 ctgttgacaaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatg 497
| | |||||||||||| ||||| ||||| |||||||||||||| | |||||| ||||||
Sbjct: 251 ccgctgacaaggaacggtttgcagagtctaagaaggagctcgacggccttctttcagatg 310
Query: 498 actcccttgcaaacgttcctttcctcatactgggcaacaagattgacat-cccatacgcg 556
||||||| || || || ||||||||| ||||||| |||||||||||||| ||||| |||
Sbjct: 311 actccctggcgaatgtgcctttcctcgtactgggtaacaagattgacatacccat-cgca 369
Query: 557 gcttcagaggaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggc 616
|| || ||||||||||| | |||||||| || |||||||||||||| || |||||||||
Sbjct: 370 gcatctgaggaggagctccgctactaccttgggctgagcaacttcaccactgggaagggc 429
Query: 617 aacgtgaacttggccgactccaatgtccggcccctggagatcttcatgtgcag 669
|||||||||||| | || || || || |||||||||||| | |||||||||||
Sbjct: 430 aacgtgaacttgtcggattcaaacgtgcggcccctggaggtgttcatgtgcag 482
>gb|BQ460776.1|BQ460776 HA05P11r HA Hordeum vulgare subsp. vulgare cDNA clone HA05P11
5-PRIME, mRNA sequence
Length = 557
Score = 444 bits (224), Expect = e-123
Identities = 356/400 (89%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 114 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 173
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 174 aggccaagatcctctttcttggcctggacaacgctggcaagaccaccctcctccacatgc 233
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 234 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 293
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 294 gcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgag 353
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 354 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 413
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
||||||| ||||| ||||| |||||||||||||| | |||||| ||||||||||||| |
Sbjct: 414 aggaacggtttgcagagtctaagaaggagctcgacggccttctttcagatgactccctgg 473
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacat 546
| || || ||||||||| ||||||| ||||||||||||||
Sbjct: 474 cgaatgtgcctttcctcgtactgggtaacaagattgacat 513
>gb|BF255517.3|BF255517 HVSMEf0007B04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007B04f, mRNA sequence
Length = 840
Score = 418 bits (211), Expect = e-115
Identities = 490/583 (84%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 10 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 69
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 70 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 129
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 130 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 189
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 190 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 249
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 250 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 309
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 310 aaagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 369
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
||||| || || || ||||| || ||||| ||||||||||||||||| || || || ||
Sbjct: 370 gcaaatgtcccatttctcatccttggcaataagattgacatcccatatgcagcctctgaa 429
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| |||||| | || |||| ||||| |||||||||||||| ||||||||||| |||||
Sbjct: 430 gaagagctgcgatatcacctaggccttagcaacttcacaactgggaagggcaaggtgaat 489
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| | ||||||||||||||||| || ||| | |||||||||||||| || |||||||||
Sbjct: 490 cttgttgactccaatgtccggcctcttgaggtgttcatgtgcagtgttgtccgcaagatg 549
Query: 686 ggctatggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|||||||| || || || || ||| | || |||||||||||||
Sbjct: 550 ggctatggtgatgggtttaagtgggtctcgcagtacatcaagt 592
>gb|CK123091.1|CK123091 BES1824102b07 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B072 5-PRIME, mRNA sequence
Length = 644
Score = 412 bits (208), Expect = e-113
Identities = 356/403 (88%), Gaps = 3/403 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 112 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 171
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 172 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 231
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 232 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 291
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 292 gcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgag 351
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 352 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 411
Query: 447 aggaacgttttgccgagtcgaa-gaaggagctcgatgcgcttcttgcagatgactccctt 505
||||||| ||||| ||||| || |||||||||||| | |||||| |||||||||||||
Sbjct: 412 aggaacggtttgcagagtctaaggaaggagctcgacggccttctttcagatgactccctg 471
Query: 506 gcaaacgttcc--tttcctcatactgggcaacaagattgacat 546
|| || || || ||||||| ||||||| ||||||||||||||
Sbjct: 472 gcgaatgtgcccttttcctcgtactgggtaacaagattgacat 514
>gb|CK125072.1|CK125072 BES1824106i12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I126 5-PRIME, mRNA sequence
Length = 795
Score = 398 bits (201), Expect = e-109
Identities = 463/549 (84%), Gaps = 1/549 (0%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 174 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 233
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 234 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 293
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 294 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 353
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 354 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 413
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 414 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 473
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 474 aaagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 533
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
||||| || || || ||||| || ||||| ||||||||||||||||| || || || ||
Sbjct: 534 gcaaatgtcccatttctcatccttggcaataagattgacatcccatatgcagcctctgaa 593
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccggg-aagggcaacgtgaa 624
|| |||||| | || |||| ||||| |||||||||||||| ||| |||||||| |||||
Sbjct: 594 gaagagctgcgatatcacctaggccttagcaacttcacaactgggnaagggcaaggtgaa 653
Query: 625 cttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagat 684
| | ||||||||||||||||| || ||| | |||||||||||||| || ||||||||
Sbjct: 654 tcttgttgactccaatgtccggcctcttgaggtgttcatgtgcagtgttgtccgcaagat 713
Query: 685 gggctatgg 693
|||||||||
Sbjct: 714 gggctatgg 722
>gb|CA008510.1|CA008510 HU11D01r HU Hordeum vulgare subsp. vulgare cDNA clone HU11D01
5-PRIME, mRNA sequence
Length = 496
Score = 391 bits (197), Expect = e-107
Identities = 299/333 (89%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 164 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 223
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 224 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 283
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 284 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 343
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| ||||||||||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 344 gcatcggacagatcaagttcaagaccttcgatctcggtggccaccagatcgcccgccgag 403
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||||||||||||||||||||| ||||| ||||| ||||||||||| || | |||||
Sbjct: 404 tctggaaggactactacgccaaggtggatgcggttgtttacttggtggacgccgctgaca 463
Query: 447 aggaacgttttgccgagtcgaagaaggagctcg 479
||||||| ||||| ||||| |||||||||||||
Sbjct: 464 aggaacggtttgcagagtctaagaaggagctcg 496
>gb|BJ460743.1|BJ460743 BJ460743 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42a17 3', mRNA sequence
Length = 723
Score = 389 bits (196), Expect = e-106
Identities = 385/446 (86%), Gaps = 2/446 (0%)
Strand = Plus / Minus
Query: 287 cagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaagttc 346
||||||||||||||||||||||| ||||| | || |||||||||| ||||||||||
Sbjct: 720 cagcaccagccgacgcagtacccgacgtcgnagnagctgagcatcggacagatcaagttc 661
Query: 347 aaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactacgcc 406
||| | ||||| || || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 660 aagaccttcgatctcggtggccaccagatcgcccgccgagtctggaaggactactacgcc 601
Query: 407 aaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgagtcg 466
||||| ||||| ||||| ||||||||||| || | |||||||||||| ||||| |||||
Sbjct: 600 aaggtggatgcggttgtttacttggtggacgccgctgacaaggaacggtttgcagagtct 541
Query: 467 aagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctcata 526
|||||||||||||| | |||||| ||||||||||||| || || || ||||||||| ||
Sbjct: 540 aagaaggagctcgacggccttctttcagatgactccctggcgaatgtgcctttcctcgta 481
Query: 527 ctgggcaacaagattgacat-cccatacgcggcttcagaggaggagctgaggtactacct 585
||||| |||||||||||||| ||||| ||| || || ||||||||||| | ||||||||
Sbjct: 480 ctgggtaacaagattgacatacccat-cgcagcatctgaggaggagctccgctactacct 422
Query: 586 cggcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccg 645
|| |||||||||||||| || ||||||||||||||||||||| | || || || || ||
Sbjct: 421 tgggctgagcaacttcaccactgggaagggcaacgtgaacttgtcggattcaaacgtgcg 362
Query: 646 gcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaa 705
|||||||||| | ||||||||||| | || ||||||||||||||||| ||||| |||||
Sbjct: 361 gcccctggaggtgttcatgtgcagcatcgtccgcaagatgggctatggagaaggtttcaa 302
Query: 706 atggatgtctcagtacatcaagtgag 731
||||||||| ||||||||||||||||
Sbjct: 301 atggatgtcccagtacatcaagtgag 276
>gb|BM099190.2|BM099190 EBes01_SQ002_H21_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ002_H21 5', mRNA sequence
Length = 725
Score = 379 bits (191), Expect = e-103
Identities = 484/582 (83%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || ||||||||||
Sbjct: 144 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcatgtggcagaaa 203
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 204 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 263
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 264 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 323
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 324 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 383
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 384 gtctggaaagactactacgcaagggttgatgctgtagtatacttggtagatgcatatgac 443
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 444 aaagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 503
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
| || || || || ||||| || ||||| ||||||||||||||||| || || || ||
Sbjct: 504 gncaatgtcccatttctcatccttggcaataagattgacatcccatatgcagcctctgaa 563
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| |||||| | || |||| ||||| |||||||||||||| |||||||| | |||||
Sbjct: 564 gaagagctgcgatatcacctaggccttagcaacttcacaactgggaaggggcaggtgaat 623
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| | ||||||||||||||||| || ||| | |||||||||||||| || |||||||||
Sbjct: 624 cttgttgactccaatgtccggcctcttgaggtgttcatgtgcagtgttgtccgcaagatg 683
Query: 686 ggctatggcgaaggcttcaaatggatgtctcagtacatcaag 727
|||||||| || || || || ||| | || ||||||||||||
Sbjct: 684 ggctatggtgatgggtttaagtgggtctcgcagtacatcaag 725
>gb|BM369508.2|BM369508 EBem07_SQ003_M17_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ003_M17 5', mRNA sequence
Length = 636
Score = 363 bits (183), Expect = 9e-099
Identities = 423/503 (84%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || ||||||||||
Sbjct: 129 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcatgtggcagaaa 188
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 189 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 248
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 249 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 308
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 309 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 368
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 369 gtctggaaagactactacgcaagggttgatgctgtagtatacttggtagatgcatatgac 428
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 429 aaagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 488
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
||||| || || || ||||| || ||||| ||||||||||||||||| || || || ||
Sbjct: 489 gcaaatgtcccatttctcatccttggcaataagattgacatcccatatgcagcctctgaa 548
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| |||||| | || |||| ||||| |||||||||||||| ||||||||||| |||||
Sbjct: 549 gaagagctgcgatatcacctaggccttagcaacttcacaactgggaagggcaaggtgaat 608
Query: 626 ttggccgactccaatgtccggcc 648
| | |||||||||||||||||
Sbjct: 609 cttgttgactccaatgtccggcc 631
>gb|AL505462.1|AL505462 AL505462 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08I20V 5', mRNA sequence
Length = 700
Score = 355 bits (179), Expect = 2e-096
Identities = 476/575 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 108 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 167
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 168 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 227
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 228 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 287
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 288 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 347
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 348 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 407
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 408 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 467
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 468 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 527
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| ||||| | ||| || | || || ||||||||||| || || |||||||| |||| |
Sbjct: 528 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtgagc 587
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| ||| ||||||||||| ||||||||| ||||||||||||| | || |||||||||
Sbjct: 588 ctcagcgagtccaatgtccgccccctggaggtcttcatgtgcagcatcgtccgcaagatg 647
Query: 686 ggctatggcgaaggcttcaaatggatgtctcagta 720
|| ||||||||||| ||||| |||||||| |||||
Sbjct: 648 ggatatggcgaagggttcaagtggatgtcgcagta 682
>gb|BQ471183.1|BQ471183 HV01H06T HV Hordeum vulgare subsp. vulgare cDNA clone HV01H06
5-PRIME, mRNA sequence
Length = 700
Score = 355 bits (179), Expect = 2e-096
Identities = 476/575 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 114 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 173
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 174 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 233
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 234 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 293
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 294 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 353
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 354 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 413
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 414 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 473
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 474 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 533
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| ||||| | ||| || | || || ||||||||||| || || |||||||| |||| |
Sbjct: 534 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtgagc 593
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| ||| ||||||||||| ||||||||| ||||||||||||| | || |||||||||
Sbjct: 594 ctcagcgagtccaatgtccgccccctggaggtcttcatgtgcagcatcgtccgcaagatg 653
Query: 686 ggctatggcgaaggcttcaaatggatgtctcagta 720
|| ||||||||||| ||||| |||||||| |||||
Sbjct: 654 ggatatggcgaagggttcaagtggatgtcgcagta 688
>gb|BU981802.1|BU981802 HA24K23r HA Hordeum vulgare subsp. vulgare cDNA clone HA24K23
5-PRIME, mRNA sequence
Length = 620
Score = 355 bits (179), Expect = 2e-096
Identities = 398/471 (84%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 150 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 209
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 210 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 269
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 270 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 329
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 330 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 389
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 390 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 449
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 450 aaagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 509
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
||||| || || || ||||| || ||||| ||||||||||||||||| || || || ||
Sbjct: 510 gcaaatgtcccatttctcatccttggcaataagattgacatcccatatgcagcctctgaa 569
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggc 616
|| |||||| | || |||| ||||| |||||||||||||| |||||||||
Sbjct: 570 gaagagctgcgatatcacctaggccttagcaacttcacaactgggaagggc 620
>gb|CA015435.1|CA015435 HT14E23r HT Hordeum vulgare subsp. vulgare cDNA clone HT14E23
5-PRIME, mRNA sequence
Length = 650
Score = 355 bits (179), Expect = 2e-096
Identities = 476/575 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 25 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 84
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 85 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 144
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 145 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 204
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 205 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 264
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 265 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 324
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 325 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 384
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 385 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 444
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| ||||| | ||| || | || || ||||||||||| || || |||||||| |||| |
Sbjct: 445 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtgagc 504
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| ||| ||||||||||| ||||||||| ||||||||||||| | || |||||||||
Sbjct: 505 ctcagcgagtccaatgtccgccccctggaggtcttcatgtgcagcatcgtccgcaagatg 564
Query: 686 ggctatggcgaaggcttcaaatggatgtctcagta 720
|| ||||||||||| ||||| |||||||| |||||
Sbjct: 565 ggatatggcgaagggttcaagtggatgtcgcagta 599
>gb|CK123056.1|CK123056 BES1824101p18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P181 5-PRIME, mRNA sequence
Length = 783
Score = 355 bits (179), Expect = 2e-096
Identities = 476/575 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 67 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 126
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 127 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 186
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 187 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 246
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 247 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 306
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 307 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 366
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 367 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 426
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 427 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 486
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| ||||| | ||| || | || || ||||||||||| || || |||||||| |||| |
Sbjct: 487 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtgagc 546
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| ||| ||||||||||| ||||||||| ||||||||||||| | || |||||||||
Sbjct: 547 ctcagcgagtccaatgtccgccccctggaggtcttcatgtgcagcatcgtccgcaagatg 606
Query: 686 ggctatggcgaaggcttcaaatggatgtctcagta 720
|| ||||||||||| ||||| |||||||| |||||
Sbjct: 607 ggatatggcgaagggttcaagtggatgtcgcagta 641
>gb|BQ465083.1|BQ465083 HU02J14r HU Hordeum vulgare subsp. vulgare cDNA clone HU02J14
5-PRIME, mRNA sequence
Length = 651
Score = 351 bits (177), Expect = 3e-095
Identities = 471/569 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 81 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 140
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 141 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 200
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 201 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 260
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 261 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 320
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 321 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 380
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 381 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 440
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 441 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 500
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| ||||| | ||| || | || || ||||||||||| || || |||||||| |||| |
Sbjct: 501 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtgagc 560
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| ||| ||||||||||| ||||||||| ||||||||||||| | || |||||||||
Sbjct: 561 ctcagcgagtccaatgtccgccccctggaggtcttcatgtgcagcatcgtccgcaagatg 620
Query: 686 ggctatggcgaaggcttcaaatggatgtc 714
|| ||||||||||| ||||| ||||||||
Sbjct: 621 ggatatggcgaagggttcaagtggatgtc 649
>gb|BF621259.1|BF621259 HVSMEa0006D21f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0006D21f, mRNA sequence
Length = 843
Score = 347 bits (175), Expect = 5e-094
Identities = 448/540 (82%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
|||||||||| |||||||||||| ||||||||||| ||||| || ||||||||||| |
Sbjct: 178 agatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaag 237
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||| | ||| ||||| |||||||||||||||||||| |||||||||||||
Sbjct: 238 aggccaagatcctntccctcggcctngacaacgccggcaagaccactctcctccacatgc 297
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| | |
Sbjct: 298 tcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctca 357
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||||| |||||||||||| || ||||| || || || ||||||||||| || || |
Sbjct: 358 gcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacggg 417
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||||| ||||||||||| | |||||||||||| || | |||||| ||||| |||||
Sbjct: 418 tctggaaagactactacgcaagggttgatgctgtagtatccttggttgatgcatatgaca 477
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| | |
Sbjct: 478 aagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttgg 537
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
|||| || || || ||||| || || | ||||||||||||||||| || || || || |
Sbjct: 538 caaatgtcccatttctcatccttggncataagattgacatcccatatgcagcctctgaag 597
Query: 567 aggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaact 626
| |||||| | || |||| ||||| |||||||||||||| ||||||||||| |||||
Sbjct: 598 aagagctgcgatatcacctaggccttagcaacttcacaactgggaagggcaaagtgaatc 657
Query: 627 tggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgg 686
| | ||||||||||||||||| || ||| |||||||||||||| || ||||||||||
Sbjct: 658 ttgttgactccaatgtccggcctcttgaggctttcatgtgcagtgttgtccgcaagatgg 717
>gb|BJ549410.1|BJ549410 BJ549410 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33n23 5', mRNA sequence
Length = 608
Score = 347 bits (175), Expect = 5e-094
Identities = 475/575 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| ||| |||||||||||
Sbjct: 30 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggatgtggcagaag 89
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 90 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 149
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 150 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 209
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 210 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 269
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 270 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 329
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 330 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 389
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 390 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 449
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| ||||| | ||| || | || || ||||||||||| || || |||||||| |||| |
Sbjct: 450 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtgagc 509
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| ||| ||||||||||| ||||||||| ||||||||||||| | || |||||||||
Sbjct: 510 ctcagcgagtccaatgtccgccccctggaggtcttcatgtgcagcatcgtccgcaagatg 569
Query: 686 ggctatggcgaaggcttcaaatggatgtctcagta 720
|| ||||||||||| ||||| |||||||| |||||
Sbjct: 570 ggatatggcgaagggttcaagtggatgtcgcagta 604
>gb|AL503495.1|AL503495 AL503495 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02F13T 5', mRNA sequence
Length = 700
Score = 343 bits (173), Expect = 8e-093
Identities = 389/461 (84%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 180 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 239
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 240 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 299
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 300 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 359
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 360 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 419
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 420 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 479
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 480 aaagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 539
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
||||| || || || ||||| || ||||| ||||||||||||||||| || || || ||
Sbjct: 540 gcaaatgtcccatttctcatccttggcaataagattgacatcccatatgcagcctctgaa 599
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaac 606
|| |||||| | || |||| ||||| ||||||||||||||
Sbjct: 600 gaagagctgcgatatcacctaggccttagcaacttcacaac 640
>gb|CK123982.1|CK123982 BES1824106f18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F186 5-PRIME, mRNA sequence
Length = 787
Score = 341 bits (172), Expect = 3e-092
Identities = 463/560 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 67 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 126
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 127 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 186
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 187 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 246
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 247 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 306
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 307 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 366
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 367 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 426
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 427 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 486
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| ||||| | ||| || | || || ||||||||||| || || |||||||| |||| |
Sbjct: 487 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtgagc 546
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| ||| ||||||||||| ||||||||| ||||||||||||| | || |||||||||
Sbjct: 547 ctcagcgagtccaatgtccgccccctggaggtcttcatgtgcagcatcgtccgcaagatg 606
Query: 686 ggctatggcgaaggcttcaa 705
|| ||||||||||| |||||
Sbjct: 607 ggatatggcgaagggttcaa 626
>gb|CA025362.1|CA025362 HZ51P06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51P06
5-PRIME, mRNA sequence
Length = 659
Score = 337 bits (170), Expect = 5e-091
Identities = 458/554 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 106 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 165
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 166 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 225
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 226 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 285
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 286 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 345
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 346 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 405
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 406 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 465
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 466 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 525
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| ||||| | ||| || | || || ||||||||||| || || |||||||| |||| |
Sbjct: 526 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtgagc 585
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| ||| ||||||||||| ||||||||| ||||||||||||| | || |||||||||
Sbjct: 586 ctcagcgagtccaatgtccgccccctggaggtcttcatgtgcagcatcgtccgcaagatg 645
Query: 686 ggctatggcgaagg 699
|| |||||||||||
Sbjct: 646 ggatatggcgaagg 659
>gb|BG343229.2|BG343229 HVSMEg0005C16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005C16f, mRNA sequence
Length = 993
Score = 331 bits (167), Expect = 3e-089
Identities = 473/575 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| ||| |||||||||||
Sbjct: 71 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggatgtggcagaag 130
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 131 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 190
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 191 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 250
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 251 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 310
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 311 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 370
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 371 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 430
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 431 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 490
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| ||||| | ||| || | || || ||||||||||| || || |||||||| |||| |
Sbjct: 491 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtgagc 550
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| ||| ||||||||||| ||||||| ||||||||||||| | || |||||||||
Sbjct: 551 ctcagcgagtccaatgtccgccccctgggagtcttcatgtgcagcatcgtccgcaagatg 610
Query: 686 ggctatggcgaaggcttcaaatggatgtctcagta 720
|| ||||||||||| ||||| |||||||| |||||
Sbjct: 611 ggatatggcgaagggttcaagtggatgtcgcagta 645
>gb|AV915094.1|AV915094 AV915094 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9n10 5', mRNA sequence
Length = 597
Score = 331 bits (167), Expect = 3e-089
Identities = 347/407 (85%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 154 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 213
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 214 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 273
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 274 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 333
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 334 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 393
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 394 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 453
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 454 aaagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 513
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccata 552
||||| || || || ||||| || ||||| |||||||||||||||||
Sbjct: 514 gcaaatgtcccatttctcatccttggcaataagattgacatcccata 560
>gb|AV915117.1|AV915117 AV915117 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9p06 5', mRNA sequence
Length = 597
Score = 331 bits (167), Expect = 3e-089
Identities = 347/407 (85%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 156 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 215
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 216 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 275
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 276 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 335
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 336 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 395
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 396 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 455
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 456 aaagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 515
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccata 552
||||| || || || ||||| || ||||| |||||||||||||||||
Sbjct: 516 gcaaatgtcccatttctcatccttggcaataagattgacatcccata 562
>gb|BU983729.1|BU983729 HA30N16r HA Hordeum vulgare subsp. vulgare cDNA clone HA30N16
5-PRIME, mRNA sequence
Length = 534
Score = 331 bits (167), Expect = 3e-089
Identities = 347/407 (85%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 125 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 184
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 185 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 244
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 245 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 304
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 305 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 364
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 365 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 424
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 425 aaagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 484
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccata 552
||||| || || || ||||| || ||||| |||||||||||||||||
Sbjct: 485 gcaaatgtcccatttctcatccttggcaataagattgacatcccata 531
>gb|BU986184.1|BU986184 HF09O20r HF Hordeum vulgare subsp. vulgare cDNA clone HF09O20
5-PRIME, mRNA sequence
Length = 533
Score = 331 bits (167), Expect = 3e-089
Identities = 347/407 (85%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 125 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 184
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 185 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 244
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 245 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 304
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 305 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 364
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 365 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 424
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 425 aaagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 484
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccata 552
||||| || || || ||||| || ||||| |||||||||||||||||
Sbjct: 485 gcaaatgtcccatttctcatccttggcaataagattgacatcccata 531
>gb|BG344397.1|BG344397 HVSMEg0009C10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009C10f, mRNA sequence
Length = 824
Score = 329 bits (166), Expect = 1e-088
Identities = 363/429 (84%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 124 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 183
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 184 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 243
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 244 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 303
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 304 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 363
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 364 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 423
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || | | | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 424 aaagagcgctntactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 483
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
||||| || || || ||||| || ||||| ||||||||||||||||| || || || ||
Sbjct: 484 gcaaatgtcccatttctcatccttggcaataagattgacatcccatatgcagcctctgaa 543
Query: 566 gaggagctg 574
|||||||||
Sbjct: 544 gaggagctg 552
>gb|BG416499.1|BG416499 HVSMEk0012J14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0012J14f, mRNA sequence
Length = 695
Score = 325 bits (164), Expect = 2e-087
Identities = 423/508 (83%), Gaps = 1/508 (0%)
Strand = Plus / Plus
Query: 185 tcgcttgggctgtggcagaaggaggctaagatcctcttccttggcctcgacaacgccggc 244
||||| || ||||||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 3 tcgctcggcctgtggcagaaagaggccaagatcctcttcctcggcctcgacaacgccggc 62
Query: 245 aagaccaccctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacgcag 304
|||||||| |||||||||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 63 aagaccactctcctccacatgctcaaggacgagcggctggtgcagcaccagccgacgcag 122
Query: 305 taccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgaccttggg 364
|||||||||| || ||| | |||||||||| |||||||||||| || ||||| || ||
Sbjct: 123 caccccacgtcggaggagctcagcatcggcaagatcaagttcaaagccttcgatctcggc 182
Query: 365 ggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgtg 424
|| ||||||||||| || || |||||||| ||||||||||| | |||||||||||| ||
Sbjct: 183 ggtcaccagatcgctcgacgggtctggaaagactactacgcaagggttgatgctgtagta 242
Query: 425 tacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgatgcg 484
|||||||| ||||| |||||| || || ||| | || ||||| |||||||| |||||
Sbjct: 243 tacttggttgatgcatatgacaaagagcgctttactgaatcgaaaaaggagcttgatgct 302
Query: 485 cttcttgcagatgactcccttgcaaacgttcctttcctcatactgggcaacaagattgac 544
|| ||| | ||||| ||| | ||||| || || || ||||| || ||||| |||||||||
Sbjct: 303 ctcctttctgatgattccttggcaaatgtcccatttctcatccttggcaataagattgac 362
Query: 545 atcccatacgcggcttcagaggaggagctgaggtactacctcggcctgagcaacttcaca 604
|||||||| || || || || || |||||| | || |||| ||||| | ||||||||||
Sbjct: 363 atcccatatgcagcctctgaagaagagctgcgatatcacctaggccttaacaacttcaca 422
Query: 605 accgggaagggcaacgtgaacttggccgactccaatgtccggcccctggagatcttcatg 664
|| ||||||||||| ||||| | | |||| |||||||||||| | ||| | ||||||
Sbjct: 423 actgggaagggcaatgtgaatcttgttgacttcaatgtccggccttttgaggtgttcatg 482
Query: 665 tgca-gtgtggtgcgcaagatgggctat 691
|||| |||| || ||||||||| |||||
Sbjct: 483 tgcangtgttgtccgcaagatgagctat 510
>gb|BE060748.3|BE060748 HVSMEg0013D16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0013D16f, mRNA sequence
Length = 919
Score = 325 bits (164), Expect = 2e-087
Identities = 344/404 (85%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 140 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 199
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 200 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 259
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 260 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 319
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 320 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 379
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 380 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 439
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || || ||| | || ||||| |||||||| ||||| || ||| | ||||| ||| |
Sbjct: 440 aaagagcgctttactgaatcgaaaaaggagcttgatgctctcctttctgatgattccttg 499
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatccc 549
||||| || || || ||||| || ||||| ||||||||||||||
Sbjct: 500 gcaaatgtcccatttctcatgcttggcaataagattgacatccc 543
>gb|BU976147.1|BU976147 HA03D15r HA Hordeum vulgare subsp. vulgare cDNA clone HA03D15
5-PRIME, mRNA sequence
Length = 617
Score = 317 bits (160), Expect = 5e-085
Identities = 433/524 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 85 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 144
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 145 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 204
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 205 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 264
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 265 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 324
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 325 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 384
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 385 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 444
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 445 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 504
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| ||||| | ||| || | || || ||||||||||| || || |||||||| |||| |
Sbjct: 505 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtgagc 564
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcag 669
| ||| ||||||||||| ||||||||| |||||||||||||
Sbjct: 565 ctcagcgagtccaatgtccgccccctggaggtcttcatgtgcag 608
>gb|BU987698.1|BU987698 HF15I04r HF Hordeum vulgare subsp. vulgare cDNA clone HF15I04
5-PRIME, mRNA sequence
Length = 550
Score = 317 bits (160), Expect = 5e-085
Identities = 433/524 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 18 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 77
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 78 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 137
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 138 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 197
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 198 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 257
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 258 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 317
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 318 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 377
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 378 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 437
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|| ||||| | ||| || | || || ||||||||||| || || |||||||| |||| |
Sbjct: 438 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtgagc 497
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcag 669
| ||| ||||||||||| ||||||||| |||||||||||||
Sbjct: 498 ctcagcgagtccaatgtccgccccctggaggtcttcatgtgcag 541
>gb|BQ460449.1|BQ460449 HA09J24r HA Hordeum vulgare subsp. vulgare cDNA clone HA09J24
5-PRIME, mRNA sequence
Length = 537
Score = 305 bits (154), Expect = 2e-081
Identities = 292/338 (86%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 176 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 235
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 236 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 295
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 296 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 355
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 356 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 415
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 416 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 475
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgc 483
|| || || ||| | || ||||| |||||||| |||||
Sbjct: 476 aaagagcgctttactgaatcgaaaaaggagcttgatgc 513
>gb|BU980268.1|BU980268 HA20C21r HA Hordeum vulgare subsp. vulgare cDNA clone HA20C21
5-PRIME, mRNA sequence
Length = 531
Score = 305 bits (154), Expect = 2e-081
Identities = 292/338 (86%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 165 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 224
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 225 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 284
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 285 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 344
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 345 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 404
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 405 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 464
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgc 483
|| || || ||| | || ||||| |||||||| |||||
Sbjct: 465 aaagagcgctttactgaatcgaaaaaggagcttgatgc 502
>gb|CA032624.1|CA032624 HX13L05r HX Hordeum vulgare subsp. vulgare cDNA clone HX13L05
5-PRIME, mRNA sequence
Length = 557
Score = 305 bits (154), Expect = 2e-081
Identities = 292/338 (86%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 180 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 239
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 240 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 299
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 300 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 359
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 360 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 419
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 420 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 479
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgc 483
|| || || ||| | || ||||| |||||||| |||||
Sbjct: 480 aaagagcgctttactgaatcgaaaaaggagcttgatgc 517
>gb|CB882493.1|CB882493 HL02A08w HL Hordeum vulgare subsp. vulgare cDNA clone HL02A08
3-PRIME, mRNA sequence
Length = 558
Score = 305 bits (154), Expect = 2e-081
Identities = 292/338 (86%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 181 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 240
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 241 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 300
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 301 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 360
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 361 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 420
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|||||||| ||||||||||| | |||||||||||| || |||||||| ||||| ||||
Sbjct: 421 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgcatatgac 480
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgc 483
|| || || ||| | || ||||| |||||||| |||||
Sbjct: 481 aaagagcgctttactgaatcgaaaaaggagcttgatgc 518
>gb|BE193863.2|BE193863 HVSMEh0082L19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082L19f, mRNA sequence
Length = 629
Score = 303 bits (153), Expect = 7e-081
Identities = 290/333 (87%), Gaps = 2/333 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 160 agatgtttctggtggattggttctacggggtgctggcgtcgctggggctgtggcagaagg 219
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 220 aggccaagatcctcttcctcggcctggacaacgctggcaagaccaccctcctccacatgc 279
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 280 tcaaggacgagcggctggtgcagcaccagccgacgcagtacccgacgtcggaggagctga 339
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||| | ||||||||| || | ||||| || || |||||||||||||||||||| |
Sbjct: 340 gcatctgacagatcaagtttcagaccttcgatctcggtggccaccagatcgcccgccgag 399
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
||||| |||||||||||||| |||| ||||| |||| || ||| ||||| || |||||||
Sbjct: 400 tctgggaggactactacgcccaggtggatgcggttg-gttctttgtggacgccgttgaca 458
Query: 447 aggaacgttttgccgagtcgaagaaggagctcg 479
|| | || |||| |||||| ||||| |||||||
Sbjct: 459 agaaccggtttg-cgagtctaagaaagagctcg 490
>gb|BE060252.3|BE060252 HVSMEg0011L20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011L20f, mRNA sequence
Length = 540
Score = 303 bits (153), Expect = 7e-081
Identities = 258/293 (88%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 172 aagatgttcctttgggactggttctacggggtgctggcctcgctcggcctgtggcagaaa 231
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 232 gaggccaagatcctcttcctcggcctcgacaacgccggcaagaccactctcctccacatg 291
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| |||||||||||||| || |||||||||||||||||| |||||||||| || ||| |
Sbjct: 292 ctcaaggacgagcggctggtgcagcaccagccgacgcagcaccccacgtcggaggagctc 351
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| |||||||||||| || ||||| || || || ||||||||||| || ||
Sbjct: 352 agcatcggcaagatcaagttcaaagccttcgatctcggcggtcaccagatcgctcgacgg 411
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgc 438
|||||||| ||||||||||| | |||||||||||| || |||||||| |||||
Sbjct: 412 gtctggaaagactactacgcaagggttgatgctgtagtatacttggttgatgc 464
>gb|BQ465827.1|BQ465827 HU04M21r HU Hordeum vulgare subsp. vulgare cDNA clone HU04M21
5-PRIME, mRNA sequence
Length = 558
Score = 289 bits (146), Expect = 1e-076
Identities = 395/478 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 77 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 136
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 137 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 196
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 197 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 256
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 257 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 316
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 317 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 376
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 377 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 436
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 437 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 496
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtga 623
|| ||||| | ||| || | || || ||||||||||| || || |||||||| ||||
Sbjct: 497 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtga 554
>gb|CA025118.1|CA025118 HZ51E05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51E05
5-PRIME, mRNA sequence
Length = 601
Score = 289 bits (146), Expect = 1e-076
Identities = 395/478 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 106 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 165
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 166 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 225
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 226 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 285
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 286 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 345
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 346 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 405
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 406 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 465
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 466 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 525
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtga 623
|| ||||| | ||| || | || || ||||||||||| || || |||||||| ||||
Sbjct: 526 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtga 583
>gb|CA025207.1|CA025207 HZ51I05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51I05
5-PRIME, mRNA sequence
Length = 595
Score = 289 bits (146), Expect = 1e-076
Identities = 395/478 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 106 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 165
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 166 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 225
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 226 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 285
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 286 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 345
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 346 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 405
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 406 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 465
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 466 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 525
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtga 623
|| ||||| | ||| || | || || ||||||||||| || || |||||||| ||||
Sbjct: 526 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtga 583
>gb|CA029545.1|CA029545 HZ65I11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65I11
5-PRIME, mRNA sequence
Length = 594
Score = 289 bits (146), Expect = 1e-076
Identities = 395/478 (82%)
Strand = Plus / Plus
Query: 146 aagatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaag 205
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 106 aagatgttccttgtggactggttctacggggtgctcgcgtcgctcgggctgtggcagaag 165
Query: 206 gaggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatg 265
||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 166 gaggccaagatccttttcctcggcctcgacaacgccggcaagaccacgctcctccacatg 225
Query: 266 ctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttg 325
|| ||||||||| || | || ||||| ||||| || |||||||| || || || ||| ||
Sbjct: 226 ctcaaggacgagaggttggttcagcatcagcctacacagtacccaacttctgaggagctg 285
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||| | ||||||||||||||| || || | || ||||| ||||| ||||||||
Sbjct: 286 agcatcgggaagatcaagttcaaggcatttgatttaggaggccatcagattgcccgccgt 345
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
|| |||||||| ||||| |||||||||||||| || |||||| | ||||| || ||||
Sbjct: 346 gtgtggaaggattactatgccaaggttgatgcagtggtgtacctcgtggacgcctatgac 405
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
|| || | |||||||| || |||||||||||||| || || || |||| || || ||
Sbjct: 406 aaagagaggtttgccgaatccaagaaggagctcgacgccctcctctcagacgattcgctg 465
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| | ||| || ||||| || |||||||||||||| |||||||| || || || ||||||
Sbjct: 466 gccaccgtccccttcctgatcctgggcaacaagatcgacatcccctatgctgcctcagag 525
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtga 623
|| ||||| | ||| || | || || ||||||||||| || || |||||||| ||||
Sbjct: 526 gaagagctccgctaccacttgggtcttagcaacttcacgactggcaagggcaaggtga 583
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 149,565
Number of Sequences: 312970
Number of extensions: 149565
Number of successful extensions: 45078
Number of sequences better than 0.5: 162
Number of HSP's better than 0.5 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44584
Number of HSP's gapped (non-prelim): 270
length of query: 1231
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1212
effective length of database: 169,188,109
effective search space: 205055988108
effective search space used: 205055988108
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)