BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441599.2.2
(767 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG344088.2|BG344088 HVSMEg0007J23f Hordeum vulgare pre-a... 301 2e-080
gb|AV916291.1|AV916291 AV916291 K. Sato unpublished cDNA li... 301 2e-080
gb|AV916977.1|AV916977 AV916977 K. Sato unpublished cDNA li... 301 2e-080
gb|AV923559.1|AV923559 AV923559 K. Sato unpublished cDNA li... 301 2e-080
gb|AV931655.1|AV931655 AV931655 K. Sato unpublished cDNA li... 301 2e-080
gb|BQ460900.1|BQ460900 HE01M16r HE Hordeum vulgare subsp. v... 301 2e-080
gb|BQ466625.1|BQ466625 HS01B09T HS Hordeum vulgare subsp. v... 301 2e-080
gb|BQ469765.1|BQ469765 HZ01M24r HZ Hordeum vulgare subsp. v... 301 2e-080
gb|BM440853.2|BM440853 EBca01_SQ001_G18_R carpel, pre-anthe... 301 2e-080
gb|BM368188.2|BM368188 EBed01_SQ002_G17_R endosperm, 6 DPA,... 301 2e-080
gb|BM097606.2|BM097606 EBem04_SQ002_C24_R embryo, 12 DPA, n... 301 2e-080
gb|BM377927.2|BM377927 EBem04_SQ004_J22_R embryo, 12 DPA, n... 301 2e-080
gb|BM371480.2|BM371480 EBma08_SQ002_O06_R maternal, 28 DPA,... 301 2e-080
gb|BQ763856.1|BQ763856 EBro03_SQ005_H17_R root, 3 week, wat... 301 2e-080
gb|BU976730.1|BU976730 HA10D07r HA Hordeum vulgare subsp. v... 301 2e-080
gb|BU977881.1|BU977881 HA12D08r HA Hordeum vulgare subsp. v... 301 2e-080
gb|BU978542.1|BU978542 HA13I17r HA Hordeum vulgare subsp. v... 301 2e-080
gb|BU983417.1|BU983417 HA29K18r HA Hordeum vulgare subsp. v... 301 2e-080
gb|BU984022.1|BU984022 HA31M02r HA Hordeum vulgare subsp. v... 301 2e-080
gb|BU997399.1|BU997399 HI07N23r HI Hordeum vulgare subsp. v... 301 2e-080
gb|BU998875.1|BU998875 HI12G19r HI Hordeum vulgare subsp. v... 301 2e-080
gb|BU999832.1|BU999832 HI15P15r HI Hordeum vulgare subsp. v... 301 2e-080
gb|CA013173.1|CA013173 HT07J22r HT Hordeum vulgare subsp. v... 301 2e-080
gb|CA013628.1|CA013628 HT09A18r HT Hordeum vulgare subsp. v... 301 2e-080
gb|CA021210.1|CA021210 HZ39H02r HZ Hordeum vulgare subsp. v... 301 2e-080
gb|CA023173.1|CA023173 HZ45H05r HZ Hordeum vulgare subsp. v... 301 2e-080
gb|CA024625.1|CA024625 HZ49N10r HZ Hordeum vulgare subsp. v... 301 2e-080
gb|CA025039.1|CA025039 HZ51A19r HZ Hordeum vulgare subsp. v... 301 2e-080
gb|CA025246.1|CA025246 HZ51J13r HZ Hordeum vulgare subsp. v... 301 2e-080
gb|CA029397.1|CA029397 HZ65B13r HZ Hordeum vulgare subsp. v... 301 2e-080
gb|BJ549122.1|BJ549122 BJ549122 K. Sato unpublished cDNA li... 301 2e-080
gb|CB860038.1|CB860038 HI12G19w HI Hordeum vulgare subsp. v... 301 2e-080
gb|CV056266.1|CV056266 BNEL15G6 Barley EST endosperm librar... 301 2e-080
gb|CV056531.1|CV056531 BNEL18H1 Barley EST endosperm librar... 301 2e-080
gb|CV057063.1|CV057063 BNEL23f12 Barley EST endosperm libra... 301 2e-080
gb|CV058783.1|CV058783 BNEL40h1 Barley EST endosperm librar... 301 2e-080
gb|CV058787.1|CV058787 BNEL40h2 Barley EST endosperm librar... 301 2e-080
gb|CV061757.1|CV061757 BNEL71f1 Barley EST endosperm librar... 301 2e-080
gb|CK122329.1|CK122329 BES1824102o02 BES1824 Hordeum vulgar... 301 2e-080
gb|CK123815.1|CK123815 BES1824105g24 BES1824 Hordeum vulgar... 301 2e-080
gb|AV921719.1|AV921719 AV921719 K. Sato unpublished cDNA li... 299 7e-080
gb|BE455966.3|BE455966 HVSMEg0019B01f Hordeum vulgare pre-a... 295 1e-078
gb|CV060449.1|CV060449 BNEL58c2 Barley EST endosperm librar... 295 1e-078
gb|BQ659548.1|BQ659548 HE01M16u HE Hordeum vulgare subsp. v... 293 4e-078
gb|BF259294.3|BF259294 HVSMEf0018M24f Hordeum vulgare seedl... 287 3e-076
gb|BF260888.3|BF260888 HVSMEf0023D08f Hordeum vulgare seedl... 285 1e-075
gb|BU978165.1|BU978165 HA12L01r HA Hordeum vulgare subsp. v... 285 1e-075
gb|CA027739.1|CA027739 HZ59O02r HZ Hordeum vulgare subsp. v... 285 1e-075
gb|CV063968.1|CV063968 BNEL95g10 Barley EST endosperm libra... 285 1e-075
gb|CK123436.1|CK123436 BES1824104a20 BES1824 Hordeum vulgar... 283 4e-075
gb|BE193362.2|BE193362 HVSMEh0080L17f Hordeum vulgare 5-45 ... 280 6e-074
gb|BI779400.2|BI779400 EBro01_SQ003_O11_R root, 3 week, hyd... 270 6e-071
gb|BU979983.1|BU979983 HA18C03r HA Hordeum vulgare subsp. v... 270 6e-071
gb|CA002011.1|CA002011 HS06E03r HS Hordeum vulgare subsp. v... 270 6e-071
gb|CA028012.1|CA028012 HZ60L17r HZ Hordeum vulgare subsp. v... 270 6e-071
gb|BM101388.2|BM101388 EBpi01_SQ003_L07_R pistil, 1 DPA, no... 264 4e-069
gb|AV918231.1|AV918231 AV918231 K. Sato unpublished cDNA li... 260 6e-068
gb|CA025687.1|CA025687 HZ52N19r HZ Hordeum vulgare subsp. v... 254 4e-066
gb|BM100140.2|BM100140 EBma01_SQ001_F01_R maternal, 4 DPA, ... 234 3e-060
gb|CV057323.1|CV057323 BNEL26e3 Barley EST endosperm librar... 234 3e-060
gb|BM371270.2|BM371270 EBma08_SQ002_B09_R maternal, 28 DPA,... 216 8e-055
gb|BU969591.1|BU969591 HB11P12r BC Hordeum vulgare subsp. v... 214 3e-054
gb|BI776491.2|BI776491 EBpi05_SQ001_J07_R pistil, 8 DPA, no... 200 5e-050
gb|BQ665994.1|BQ665994 HZ01M24u HZ Hordeum vulgare subsp. v... 194 3e-048
gb|CB858662.1|CB858662 HI07N23w HI Hordeum vulgare subsp. v... 190 5e-047
gb|BQ757874.1|BQ757874 EBem10_SQ005_H23_R embryo, 2 Day ger... 188 2e-046
gb|BU976731.1|BU976731 HA10D07u HA Hordeum vulgare subsp. v... 184 3e-045
gb|CK124996.1|CK124996 BES1824111A2g09 BES1824 Hordeum vulg... 178 2e-043
gb|BJ550017.1|BJ550017 BJ550017 K. Sato unpublished cDNA li... 174 3e-042
gb|AV928006.1|AV928006 AV928006 K. Sato unpublished cDNA li... 170 4e-041
gb|BU980637.1|BU980637 HA21D21r HA Hordeum vulgare subsp. v... 165 3e-039
gb|AJ433556.1|AJ433556 AJ433556 S00002 Hordeum vulgare subs... 163 1e-038
gb|BM374879.1|BM374879 EBma05_SQ003_F16_R maternal, 12 DPA,... 147 6e-034
gb|BQ459836.1|BQ459836 HA07P07r HA Hordeum vulgare subsp. v... 147 6e-034
gb|BQ460597.1|BQ460597 HA06H20r HA Hordeum vulgare subsp. v... 147 6e-034
gb|BM375264.2|BM375264 EBem06_SQ002_N07_R embryo, 21 DPA, n... 147 6e-034
gb|BQ764523.1|BQ764523 EBca01_SQ004_J03_R carpel, pre-anthe... 147 6e-034
gb|BU981519.1|BU981519 HA23N24r HA Hordeum vulgare subsp. v... 147 6e-034
gb|BU997105.1|BU997105 HI06O20r HI Hordeum vulgare subsp. v... 147 6e-034
gb|CA019079.1|CA019079 HV10K24r HV Hordeum vulgare subsp. v... 147 6e-034
gb|CA026289.1|CA026289 HZ55H16r HZ Hordeum vulgare subsp. v... 147 6e-034
gb|CA028650.1|CA028650 HZ62M12r HZ Hordeum vulgare subsp. v... 147 6e-034
gb|CV054163.1|CV054163 BNEL107e1 Barley EST endosperm libra... 147 6e-034
gb|CV058390.1|CV058390 BNEL37e5 Barley EST endosperm librar... 147 6e-034
gb|CV058513.1|CV058513 BNEL38h1 Barley EST endosperm librar... 147 6e-034
gb|BI949421.1|BI949421 HVSMEl0013M24f Hordeum vulgare spike... 143 1e-032
gb|BI780839.1|BI780839 EBma05_SQ001_B24_R maternal, 12 DPA,... 141 4e-032
gb|BQ466949.1|BQ466949 HS02B09r HS Hordeum vulgare subsp. v... 141 4e-032
gb|CA010975.1|CA010975 HT07J22u HT Hordeum vulgare subsp. v... 141 4e-032
gb|BJ448314.1|BJ448314 BJ448314 K. Sato unpublished cDNA li... 137 6e-031
gb|BQ757103.1|BQ757103 EBem10_SQ002_N07_R embryo, 2 Day ger... 135 2e-030
gb|CV064027.1|CV064027 BNEL96e7 Barley EST endosperm librar... 135 2e-030
gb|BM444459.1|BM444459 EBem09_SQ005_E24_R embryo, 1 Day ger... 115 2e-024
gb|BJ456033.1|BJ456033 BJ456033 K. Sato unpublished cDNA li... 111 3e-023
gb|BQ468881.1|BQ468881 HM02K11r HM Hordeum vulgare subsp. v... 98 5e-019
gb|BM376597.2|BM376597 EBem05_SQ002_K19_R embryo, 14 DPA, n... 94 8e-018
gb|BM441518.2|BM441518 EBma05_SQ004_K12_R maternal, 12 DPA,... 84 8e-015
gb|AL499788.1|AL499788 AL499788 Hordeum vulgare Barke etiol... 70 1e-010
gb|BQ760632.1|BQ760632 EBro03_SQ003_A17_R root, 3 week, wat... 66 2e-009
gb|BU977882.1|BU977882 HA12D08u HA Hordeum vulgare subsp. v... 66 2e-009
gb|AL501438.1|AL501438 AL501438 Hordeum vulgare Barke roots... 62 3e-008
gb|BQ657538.1|BQ657538 HA07P07u HA Hordeum vulgare subsp. v... 62 3e-008
gb|BQ657907.1|BQ657907 HA06H20u HA Hordeum vulgare subsp. v... 62 3e-008
gb|BM098020.2|BM098020 EBpi03_SQ002_F05_R pistil, 4 DPA, no... 62 3e-008
gb|BI777987.2|BI777987 EBro07_SQ001_L02_R root, 3 week, red... 62 3e-008
gb|BM370590.2|BM370590 EBro08_SQ004_K21_R root, 3 week, dro... 62 3e-008
gb|BU978936.1|BU978936 HA14L04r HA Hordeum vulgare subsp. v... 62 3e-008
gb|BU979618.1|BU979618 HA16L17r HA Hordeum vulgare subsp. v... 62 3e-008
gb|CA016055.1|CA016055 HV10K24u HV Hordeum vulgare subsp. v... 62 3e-008
gb|CA032476.1|CA032476 HX13C16r HX Hordeum vulgare subsp. v... 62 3e-008
gb|CV056147.1|CV056147 BNEL14E12 Barley EST endosperm libra... 62 3e-008
gb|BQ467999.1|BQ467999 HR01J20r HR Hordeum vulgare subsp. v... 48 4e-004
gb|BM445185.2|BM445185 EBem09_SQ007_K21_R embryo, 1 Day ger... 48 4e-004
gb|BQ767295.1|BQ767295 EBro08_SQ008_B18_R root, 3 week, dro... 48 4e-004
gb|CA019036.1|CA019036 HV10I17r HV Hordeum vulgare subsp. v... 44 0.007
gb|BF259113.3|BF259113 HVSMEf0017L21f Hordeum vulgare seedl... 42 0.026
gb|CA017475.1|CA017475 HV05F03r HV Hordeum vulgare subsp. v... 40 0.10
gb|CK122439.1|CK122439 BES1824103h01 BES1824 Hordeum vulgar... 40 0.10
gb|BF626926.2|BF626926 HVSMEb0001L12f Hordeum vulgare seedl... 38 0.41
gb|BG310199.1|BG310199 HVSMEc0016H04f Hordeum vulgare seedl... 38 0.41
gb|BI950053.1|BI950053 HVSMEl0018B14f Hordeum vulgare spike... 38 0.41
gb|BI950553.1|BI950553 HVSMEl0022A06f Hordeum vulgare spike... 38 0.41
gb|BF261867.2|BF261867 HV_CEa0002H02f Hordeum vulgare seedl... 38 0.41
gb|BF263277.2|BF263277 HV_CEa0006F05f Hordeum vulgare seedl... 38 0.41
gb|BF263129.3|BF263129 HV_CEa0005O12f Hordeum vulgare seedl... 38 0.41
gb|BQ762290.1|BQ762290 EBro01_SQ005_J10_R root, 3 week, hyd... 38 0.41
gb|BU985981.1|BU985981 HF09D22r HF Hordeum vulgare subsp. v... 38 0.41
gb|CA018607.1|CA018607 HV09C04r HV Hordeum vulgare subsp. v... 38 0.41
gb|CV060232.1|CV060232 BNEL55h11 Barley EST endosperm libra... 38 0.41
gb|CV061415.1|CV061415 BNEL68e9 Barley EST endosperm librar... 38 0.41
gb|CK125373.1|CK125373 BES1824107n06 BES1824 Hordeum vulgar... 38 0.41
>gb|BG344088.2|BG344088 HVSMEg0007J23f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007J23f, mRNA sequence
Length = 754
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 109 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 168
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 169 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 228
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 229 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 288
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 289 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 348
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 349 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 408
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 409 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 460
>gb|AV916291.1|AV916291 AV916291 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12h19 5', mRNA sequence
Length = 561
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 61 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 120
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 121 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 180
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 181 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 240
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 241 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 300
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 301 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 360
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 361 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 412
>gb|AV916977.1|AV916977 AV916977 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20f06 5', mRNA sequence
Length = 559
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 115 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 174
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 175 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 234
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 235 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 294
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 295 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 354
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 355 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 414
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 415 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 466
>gb|AV923559.1|AV923559 AV923559 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13j07 5', mRNA sequence
Length = 628
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 101 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 160
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 161 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 220
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 221 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 280
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 281 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 340
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 341 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 400
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 401 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 452
>gb|AV931655.1|AV931655 AV931655 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23k17 3', mRNA sequence
Length = 529
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Minus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 464 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 405
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 404 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 345
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 344 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 285
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 284 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 225
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 224 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 165
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 164 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 113
>gb|BQ460900.1|BQ460900 HE01M16r HE Hordeum vulgare subsp. vulgare cDNA clone HE01M16
5-PRIME, mRNA sequence
Length = 509
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 63 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 122
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 123 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 182
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 183 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 242
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 243 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 302
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 303 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 362
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 363 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 414
>gb|BQ466625.1|BQ466625 HS01B09T HS Hordeum vulgare subsp. vulgare cDNA clone HS01B09
5-PRIME, mRNA sequence
Length = 572
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 117 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 176
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 177 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 236
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 237 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 296
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 297 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 356
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 357 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 416
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 417 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 468
>gb|BQ469765.1|BQ469765 HZ01M24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01M24
5-PRIME, mRNA sequence
Length = 537
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 91 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 150
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 151 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 210
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 211 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 270
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 271 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 330
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 331 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 390
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 391 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 442
>gb|BM440853.2|BM440853 EBca01_SQ001_G18_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ001_G18 5', mRNA sequence
Length = 478
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 77 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 136
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 137 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 196
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 197 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 256
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 257 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 316
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 317 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 376
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 377 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 428
>gb|BM368188.2|BM368188 EBed01_SQ002_G17_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_G17 5', mRNA sequence
Length = 647
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 81 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 140
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 141 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 200
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 201 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 260
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 261 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 320
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 321 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 380
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 432
>gb|BM097606.2|BM097606 EBem04_SQ002_C24_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_C24 5', mRNA sequence
Length = 560
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 109 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 168
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 169 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 228
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 229 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 288
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 289 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 348
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 349 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 408
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 409 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 460
>gb|BM377927.2|BM377927 EBem04_SQ004_J22_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_J22 5', mRNA sequence
Length = 669
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 136 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 195
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 196 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 255
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 256 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 315
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 316 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 375
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 376 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 435
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 436 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 487
>gb|BM371480.2|BM371480 EBma08_SQ002_O06_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_O06 5', mRNA sequence
Length = 581
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 89 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 148
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 149 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 208
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 209 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 268
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 269 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 328
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 329 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 388
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 389 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 440
>gb|BQ763856.1|BQ763856 EBro03_SQ005_H17_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_H17 5', mRNA sequence
Length = 684
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 96 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 155
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 156 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 215
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 216 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 275
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 276 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 335
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 336 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 395
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 396 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 447
>gb|BU976730.1|BU976730 HA10D07r HA Hordeum vulgare subsp. vulgare cDNA clone HA10D07
5-PRIME, mRNA sequence
Length = 552
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 121 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 180
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 181 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 240
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 241 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 300
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 301 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 360
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 361 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 420
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 421 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 472
>gb|BU977881.1|BU977881 HA12D08r HA Hordeum vulgare subsp. vulgare cDNA clone HA12D08
5-PRIME, mRNA sequence
Length = 529
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 95 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 154
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 155 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 214
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 215 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 274
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 275 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 334
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 335 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 394
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 395 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 446
>gb|BU978542.1|BU978542 HA13I17r HA Hordeum vulgare subsp. vulgare cDNA clone HA13I17
5-PRIME, mRNA sequence
Length = 525
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 92 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 151
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 152 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 211
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 212 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 271
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 272 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 331
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 332 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 391
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 392 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 443
>gb|BU983417.1|BU983417 HA29K18r HA Hordeum vulgare subsp. vulgare cDNA clone HA29K18
5-PRIME, mRNA sequence
Length = 575
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 62 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 121
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 122 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 181
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 182 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 241
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 242 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 301
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 302 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 361
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 362 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 413
>gb|BU984022.1|BU984022 HA31M02r HA Hordeum vulgare subsp. vulgare cDNA clone HA31M02
5-PRIME, mRNA sequence
Length = 574
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 141 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 200
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 201 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 260
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 261 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 320
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 321 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 380
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 381 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 440
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 492
>gb|BU997399.1|BU997399 HI07N23r HI Hordeum vulgare subsp. vulgare cDNA clone HI07N23
5-PRIME, mRNA sequence
Length = 624
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 99 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 158
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 159 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 218
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 219 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 278
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 279 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 338
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 339 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 398
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 399 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 450
>gb|BU998875.1|BU998875 HI12G19r HI Hordeum vulgare subsp. vulgare cDNA clone HI12G19
5-PRIME, mRNA sequence
Length = 574
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 47 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 106
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 107 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 166
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 167 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 226
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 227 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 286
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 287 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 346
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 347 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 398
>gb|BU999832.1|BU999832 HI15P15r HI Hordeum vulgare subsp. vulgare cDNA clone HI15P15
5-PRIME, mRNA sequence
Length = 534
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 39 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 98
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 99 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 158
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 159 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 218
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 219 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 278
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 279 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 338
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 339 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 390
>gb|CA013173.1|CA013173 HT07J22r HT Hordeum vulgare subsp. vulgare cDNA clone HT07J22
5-PRIME, mRNA sequence
Length = 504
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 56 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 115
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 116 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 175
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 176 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 235
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 236 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 295
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 296 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 355
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 356 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 407
>gb|CA013628.1|CA013628 HT09A18r HT Hordeum vulgare subsp. vulgare cDNA clone HT09A18
5-PRIME, mRNA sequence
Length = 650
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 62 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 121
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 122 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 181
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 182 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 241
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 242 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 301
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 302 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 361
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 362 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 413
>gb|CA021210.1|CA021210 HZ39H02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39H02
5-PRIME, mRNA sequence
Length = 580
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 85 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 144
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 145 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 204
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 205 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 264
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 265 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 324
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 325 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 384
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 436
>gb|CA023173.1|CA023173 HZ45H05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45H05
5-PRIME, mRNA sequence
Length = 455
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 93 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 152
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 153 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 212
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 213 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 272
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 273 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 332
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 333 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 392
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 393 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 444
>gb|CA024625.1|CA024625 HZ49N10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N10
5-PRIME, mRNA sequence
Length = 464
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 97 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 156
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 157 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 216
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 217 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 276
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 277 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 336
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 337 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 396
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 397 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 448
>gb|CA025039.1|CA025039 HZ51A19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51A19
5-PRIME, mRNA sequence
Length = 474
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 30 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 89
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 90 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 149
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 150 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 209
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 210 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 269
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 270 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 329
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 330 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 381
>gb|CA025246.1|CA025246 HZ51J13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51J13
5-PRIME, mRNA sequence
Length = 561
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 50 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 109
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 110 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 169
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 170 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 229
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 230 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 289
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 290 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 349
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 350 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 401
>gb|CA029397.1|CA029397 HZ65B13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65B13
5-PRIME, mRNA sequence
Length = 564
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 55 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 114
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 115 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 174
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 175 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 234
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 235 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 294
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 295 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 354
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 355 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 406
>gb|BJ549122.1|BJ549122 BJ549122 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29h16 5', mRNA sequence
Length = 637
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 100 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 159
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 160 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 219
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 220 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 279
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 280 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 339
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 340 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 399
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 400 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 451
>gb|CB860038.1|CB860038 HI12G19w HI Hordeum vulgare subsp. vulgare cDNA clone HI12G19
3-PRIME, mRNA sequence
Length = 586
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Minus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 528 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 469
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 468 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 409
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 408 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 349
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 348 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 289
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 288 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 229
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 228 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 177
>gb|CV056266.1|CV056266 BNEL15G6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL15G6 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 581
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 89 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 148
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 149 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 208
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 209 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 268
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 269 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 328
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 329 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 388
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 389 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 440
>gb|CV056531.1|CV056531 BNEL18H1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL18H1 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 596
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 87 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 146
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 147 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 206
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 207 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 266
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 267 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 326
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 327 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 386
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 387 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 438
>gb|CV057063.1|CV057063 BNEL23f12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL23f12 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 610
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 96 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 155
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 156 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 215
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 216 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 275
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 276 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 335
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 336 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 395
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 396 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 447
>gb|CV058783.1|CV058783 BNEL40h1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL40h1 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 598
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 95 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 154
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 155 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 214
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 215 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 274
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 275 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 334
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 335 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 394
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 395 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 446
>gb|CV058787.1|CV058787 BNEL40h2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL40h2 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 585
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Minus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 516 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 457
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 456 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 397
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 396 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 337
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 336 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 277
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 276 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 217
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 216 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 165
>gb|CV061757.1|CV061757 BNEL71f1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL71f1 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 541
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 85 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 144
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 145 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 204
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 205 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 264
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 265 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 324
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 325 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 384
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 436
>gb|CK122329.1|CK122329 BES1824102o02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O022 5-PRIME, mRNA sequence
Length = 774
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 89 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 148
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 149 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 208
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 209 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 268
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 269 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 328
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 329 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 388
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 389 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 440
>gb|CK123815.1|CK123815 BES1824105g24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G245 5-PRIME, mRNA sequence
Length = 644
Score = 301 bits (152), Expect = 2e-080
Identities = 302/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 49 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 108
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 109 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 168
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 169 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 228
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 229 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 288
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 289 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 348
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 349 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 400
>gb|AV921719.1|AV921719 AV921719 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12h19 3', mRNA sequence
Length = 632
Score = 299 bits (151), Expect = 7e-080
Identities = 286/331 (86%)
Strand = Plus / Minus
Query: 158 agcactactaccggacgttcgacaccaaccgcgcggcgctggtggggctgtatcaggaga 217
|||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||||
Sbjct: 617 agcactactaccagacgttcgactccaaccgcgccgcgctggtggggctgtaccaggacg 558
Query: 218 cctccatgctcaccttcgagggccagaagttccagggcccatccgccattgccggcaagc 277
|||||||||||||||||||||| |||||||| ||||| ||||||| || |||||||
Sbjct: 557 gctccatgctcaccttcgagggcgagaagttcggcggccccgccgccatcgctggcaagc 498
Query: 278 tcggatctcttcccttccaggcctgcgagcaccagatcgtcaccgtcgactgccagccgt 337
|||||||||| ||||||||| ||| ||||| |||||| ||||||||||||||||| |
Sbjct: 497 tcggatctctccccttccagcagtgccagcacaagatcgataccgtcgactgccagccct 438
Query: 338 cggggccccagggaggcatgctcgtcttcgtctccggttccatccgcaccggccccgagg 397
||||||||||||| ||| | ||||||||||||||||| ||||| ||||||||||| |
Sbjct: 437 cggggccccagggcggcgtcctcgtcttcgtctccggcaccatcaccaccggccccggcg 378
Query: 398 agcaccccatcaagttctcccaggcattccatttgctgccggcagctgggtccttcttcg 457
|||||||| |||||||||| ||| |||||||||||||| || | ||| ||||| ||
Sbjct: 377 agcaccccctcaagttctcacagatgttccatttgctgccagctggagggagcttctacg 318
Query: 458 tgcagaatgacatgttccgcctgaactatgg 488
|||||||||||||||||||||||||||||||
Sbjct: 317 tgcagaatgacatgttccgcctgaactatgg 287
>gb|BE455966.3|BE455966 HVSMEg0019B01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019B01f, mRNA sequence
Length = 595
Score = 295 bits (149), Expect = 1e-078
Identities = 301/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 52 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 111
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 112 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 171
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 172 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 231
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 232 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 291
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| |||||||| |||||||||| ||| |||||||||||||
Sbjct: 292 ccatcaccaccggccccggcgagcacccnctcaagttctcacagatgttccatttgctgc 351
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 352 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 403
>gb|CV060449.1|CV060449 BNEL58c2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL58c2 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 535
Score = 295 bits (149), Expect = 1e-078
Identities = 301/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 85 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 144
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 145 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 204
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 205 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 264
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 265 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 324
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| |||||||| |||||||||| ||| |||||||||||||
Sbjct: 325 ccatcaccaccggccccggcgagcacccnctcaagttctcacagatgttccatttgctgc 384
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 436
>gb|BQ659548.1|BQ659548 HE01M16u HE Hordeum vulgare subsp. vulgare cDNA clone HE01M16
3-PRIME, mRNA sequence
Length = 576
Score = 293 bits (148), Expect = 4e-078
Identities = 301/352 (85%)
Strand = Plus / Minus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 514 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 455
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 454 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 395
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 394 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 335
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | ||||| |||||||||||
Sbjct: 334 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtattcgtctccggca 275
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 274 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 215
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 214 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 163
>gb|BF259294.3|BF259294 HVSMEf0018M24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0018M24f, mRNA sequence
Length = 723
Score = 287 bits (145), Expect = 3e-076
Identities = 302/353 (85%), Gaps = 1/353 (0%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 125 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 184
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 185 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 244
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 245 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 304
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 305 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 364
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 365 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 424
Query: 437 cggcagctgggtccttcttcgtgcagaatgacat-gttccgcctgaactatgg 488
| || | ||| ||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 425 cagctggagggaacttctacgtgcagaatgacatggttccgcctgaactatgg 477
>gb|BF260888.3|BF260888 HVSMEf0023D08f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023D08f, mRNA sequence
Length = 701
Score = 285 bits (144), Expect = 1e-075
Identities = 300/352 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 53 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 112
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 113 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 172
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 173 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 232
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| ||||||||||| || ||| | ||||||||||||| |||
Sbjct: 233 ataccgtcgactgccagccctcggggccccaaggcggcgtcctcgtcttcgtcttcggca 292
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 293 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 352
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 353 cagctggagggagcttctacgtgcagaatgacatgttccgcctgaactatgg 404
>gb|BU978165.1|BU978165 HA12L01r HA Hordeum vulgare subsp. vulgare cDNA clone HA12L01
5-PRIME, mRNA sequence
Length = 466
Score = 285 bits (144), Expect = 1e-075
Identities = 294/344 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 123 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 182
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 183 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 242
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 243 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 302
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 303 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 362
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 363 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 422
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctg 480
| || | ||| ||||| |||||||||||||||||||||||||
Sbjct: 423 cagctggagggagcttctacgtgcagaatgacatgttccgcctg 466
>gb|CA027739.1|CA027739 HZ59O02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59O02
5-PRIME, mRNA sequence
Length = 424
Score = 285 bits (144), Expect = 1e-075
Identities = 294/344 (85%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 81 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 140
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 141 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 200
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 201 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 260
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 261 ataccgtcgactgccagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 320
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 321 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 380
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctg 480
| || | ||| ||||| |||||||||||||||||||||||||
Sbjct: 381 cagctggagggagcttctacgtgcagaatgacatgttccgcctg 424
>gb|CV063968.1|CV063968 BNEL95g10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL95g10 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 628
Score = 285 bits (144), Expect = 1e-075
Identities = 284/331 (85%)
Strand = Plus / Minus
Query: 158 agcactactaccggacgttcgacaccaaccgcgcggcgctggtggggctgtatcaggaga 217
|||||||||||| |||||||||| |||||||| | ||||||||||||||||| ||||
Sbjct: 621 agcactactaccagacgttcgactccaaccgcnccgcgctggtggggctgtacaaggacg 562
Query: 218 cctccatgctcaccttcgagggccagaagttccagggcccatccgccattgccggcaagc 277
|||||||||||||||||||||| |||||||| ||||| ||||||| || |||||||
Sbjct: 561 gctccatgctcaccttcgagggcgagaagttcggcggccccgccgccatcgctggcaagc 502
Query: 278 tcggatctcttcccttccaggcctgcgagcaccagatcgtcaccgtcgactgccagccgt 337
|||||||||| ||||||||| ||| ||||| |||||| ||||||||||||||||| |
Sbjct: 501 tcggatctctccccttccagcagtgccagcacaagatcgataccgtcgactgccagccct 442
Query: 338 cggggccccagggaggcatgctcgtcttcgtctccggttccatccgcaccggccccgagg 397
||||||||||||| ||| | ||||||||||||||||| ||||| ||||||||||| |
Sbjct: 441 cggggccccagggcggcgtcctcgtcttcgtctccggcaccatcaccaccggccccggcg 382
Query: 398 agcaccccatcaagttctcccaggcattccatttgctgccggcagctgggtccttcttcg 457
|||||||| |||||||||| ||| |||||||||||||| || | ||| ||||| ||
Sbjct: 381 agcaccccctcaagttctcacagatgttccatttgctgccagctggagggagcttctacg 322
Query: 458 tgcagaatgacatgttccgcctgaactatgg 488
|||||||||||||||||||||||||||||||
Sbjct: 321 tgcagaatgacatgttccgcctgaactatgg 291
>gb|CK123436.1|CK123436 BES1824104a20 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A204 5-PRIME, mRNA sequence
Length = 593
Score = 283 bits (143), Expect = 4e-075
Identities = 299/352 (84%)
Strand = Plus / Plus
Query: 137 cggtggcgaaagccttcgtggagcactactaccggacgttcgacaccaaccgcgcggcgc 196
||||| |||| || ||||| |||||||||||| |||||||||| |||||||||| ||||
Sbjct: 89 cggtgtcgaaggcgttcgttcagcactactaccagacgttcgactccaaccgcgccgcgc 148
Query: 197 tggtggggctgtatcaggagacctccatgctcaccttcgagggccagaagttccagggcc 256
||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 149 tggtggggctgtaccaggacggctccatgctcaccttcgagggcgagaagttcggcggcc 208
Query: 257 catccgccattgccggcaagctcggatctcttcccttccaggcctgcgagcaccagatcg 316
| ||||||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 209 ccgccgccatcgctggcaagctcggatctctccccttccagcagtgccagcacaagatcg 268
Query: 317 tcaccgtcgactgccagccgtcggggccccagggaggcatgctcgtcttcgtctccggtt 376
||||||||||| |||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 269 ataccgtcgactgnnagccctcggggccccagggcggcgtcctcgtcttcgtctccggca 328
Query: 377 ccatccgcaccggccccgaggagcaccccatcaagttctcccaggcattccatttgctgc 436
||||| ||||||||||| ||||||||| |||||||||| ||| |||||||||||||
Sbjct: 329 ccatcaccaccggccccggcgagcaccccctcaagttctcacagatgttccatttgctgc 388
Query: 437 cggcagctgggtccttcttcgtgcagaatgacatgttccgcctgaactatgg 488
| || | ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 389 cagctggagggagcttctangtgcagaatgacatgttccgcctgaactatgg 440
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 144,912
Number of Sequences: 312970
Number of extensions: 144912
Number of successful extensions: 62667
Number of sequences better than 0.5: 131
Number of HSP's better than 0.5 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62288
Number of HSP's gapped (non-prelim): 200
length of query: 767
length of database: 175,134,539
effective HSP length: 19
effective length of query: 748
effective length of database: 169,188,109
effective search space: 126552705532
effective search space used: 126552705532
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)