BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2430946.2.3
(3896 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF260649.2|BF260649 HVSMEf0022J05f Hordeum vulgare seedl... 969 0.0
gb|BQ768380.1|BQ768380 EBro08_SQ011_E16_R root, 3 week, dro... 922 0.0
gb|CB882157.1|CB882157 HL01A17w HL Hordeum vulgare subsp. v... 872 0.0
gb|BF263370.1|BF263370 HV_CEa0006J03f Hordeum vulgare seedl... 803 0.0
gb|BG343963.1|BG343963 HVSMEg0007D23f Hordeum vulgare pre-a... 753 0.0
gb|CA015150.1|CA015150 HT13H01r HT Hordeum vulgare subsp. v... 702 0.0
gb|BJ453328.1|BJ453328 BJ453328 K. Sato unpublished cDNA li... 668 0.0
gb|BU972673.1|BU972673 HB22G06r BC Hordeum vulgare subsp. v... 654 0.0
gb|BQ472793.1|BQ472793 HB01H14r BC Hordeum vulgare subsp. v... 648 0.0
gb|BF064711.2|BF064711 HV_CEb0017G02f Hordeum vulgare seedl... 642 0.0
gb|BI948889.1|BI948889 HVSMEl0011E15f Hordeum vulgare spike... 640 0.0
gb|AV836384.1|AV836384 AV836384 K. Sato unpublished cDNA li... 636 e-180
gb|CA030609.1|CA030609 HX07J05r HX Hordeum vulgare subsp. v... 628 e-178
gb|CA030647.1|CA030647 HX07L05r HX Hordeum vulgare subsp. v... 628 e-178
gb|AL503512.1|AL503512 AL503512 Hordeum vulgare Barke roots... 618 e-175
gb|BQ463453.1|BQ463453 HI05F03r HI Hordeum vulgare subsp. v... 601 e-170
gb|BM376392.2|BM376392 EBem05_SQ002_B14_R embryo, 14 DPA, n... 559 e-157
gb|BF258638.2|BF258638 HVSMEf0016E13f Hordeum vulgare seedl... 555 e-156
gb|AL505797.1|AL505797 AL505797 Hordeum vulgare Barke roots... 547 e-154
gb|BU985115.1|BU985115 HF06C19r HF Hordeum vulgare subsp. v... 513 e-143
gb|BE214667.2|BE214667 HV_CEb0004C10f Hordeum vulgare seedl... 507 e-142
gb|BQ467842.1|BQ467842 HR01B16r HR Hordeum vulgare subsp. v... 482 e-134
gb|BQ660756.1|BQ660756 HI05F03u HI Hordeum vulgare subsp. v... 371 e-100
gb|BU969975.1|BU969975 HB13D11r BC Hordeum vulgare subsp. v... 337 2e-090
gb|CB875240.1|CB875240 HX07L05w HX Hordeum vulgare subsp. v... 333 3e-089
gb|CB875201.1|CB875201 HX07J05w HX Hordeum vulgare subsp. v... 331 1e-088
gb|BQ469740.1|BQ469740 HZ01L16r HZ Hordeum vulgare subsp. v... 313 2e-083
gb|BE411751.1|BE411751 ISC008.H06F990806 ITEC ISC Barley Le... 309 4e-082
gb|BE411894.1|BE411894 ISC010.D05F990917 ITEC ISC Barley Le... 307 1e-081
gb|BJ460872.1|BJ460872 BJ460872 K. Sato unpublished cDNA li... 285 5e-075
gb|BJ468308.1|BJ468308 BJ468308 K. Sato unpublished cDNA li... 272 8e-071
gb|BG368285.2|BG368285 HVSMEi0017H01f Hordeum vulgare 20 DA... 266 5e-069
gb|AV929091.1|AV929091 AV929091 K. Sato unpublished cDNA li... 266 5e-069
gb|BJ447699.1|BJ447699 BJ447699 K. Sato unpublished cDNA li... 252 8e-065
gb|BJ455449.1|BJ455449 BJ455449 K. Sato unpublished cDNA li... 252 8e-065
gb|AL503049.1|AL503049 AL503049 Hordeum vulgare Barke roots... 216 4e-054
gb|BQ464910.1|BQ464910 HU02B19r HU Hordeum vulgare subsp. v... 210 3e-052
gb|BE216853.1|BE216853 HV_CEb0011N06f Hordeum vulgare seedl... 192 6e-047
gb|AV836573.1|AV836573 AV836573 K. Sato unpublished cDNA li... 190 2e-046
gb|AV914933.1|AV914933 AV914933 K. Sato unpublished cDNA li... 190 2e-046
gb|AV925215.1|AV925215 AV925215 K. Sato unpublished cDNA li... 190 2e-046
gb|BM816139.1|BM816139 HC105G09_T3.ab1 HC Hordeum vulgare s... 190 2e-046
gb|BU990492.1|BU990492 HF25D10r HF Hordeum vulgare subsp. v... 190 2e-046
gb|AL503528.1|AL503528 AL503528 Hordeum vulgare Barke roots... 188 9e-046
gb|BF258768.2|BF258768 HVSMEf0016K01f Hordeum vulgare seedl... 188 9e-046
gb|BI779535.2|BI779535 EBro01_SQ004_F12_R root, 3 week, hyd... 188 9e-046
gb|CA031178.1|CA031178 HX09D18r HX Hordeum vulgare subsp. v... 188 9e-046
gb|BM816138.1|BM816138 HC109B12_T3.ab1 HC Hordeum vulgare s... 182 6e-044
gb|BU989992.1|BU989992 HF23J07r HF Hordeum vulgare subsp. v... 182 6e-044
gb|AL505671.1|AL505671 AL505671 Hordeum vulgare Barke roots... 174 1e-041
gb|AV914152.1|AV914152 AV914152 K. Sato unpublished cDNA li... 170 2e-040
gb|CA009005.1|CA009005 HU12N24r HU Hordeum vulgare subsp. v... 165 1e-038
gb|AV913277.1|AV913277 AV913277 K. Sato unpublished cDNA li... 159 8e-037
gb|AV913278.1|AV913278 AV913278 K. Sato unpublished cDNA li... 159 8e-037
gb|BQ465284.1|BQ465284 HU03C22r HU Hordeum vulgare subsp. v... 159 8e-037
gb|BE060456.3|BE060456 HVSMEg0012F17f Hordeum vulgare pre-a... 157 3e-036
gb|BU999035.1|BU999035 HI12P13r HI Hordeum vulgare subsp. v... 157 3e-036
gb|AL503288.1|AL503288 AL503288 Hordeum vulgare Barke roots... 137 3e-030
gb|BM368747.1|BM368747 EBem08_SQ004_H23_R embryo, 40 DPA, n... 135 1e-029
gb|AL500926.1|AL500926 AL500926 Hordeum vulgare Barke roots... 133 5e-029
gb|BI951084.1|BI951084 HVSMEl0024F09f Hordeum vulgare spike... 131 2e-028
gb|AV932043.1|AV932043 AV932043 K. Sato unpublished cDNA li... 131 2e-028
gb|CA020497.1|CA020497 HZ36H21r HZ Hordeum vulgare subsp. v... 131 2e-028
gb|BF628750.2|BF628750 HVSMEb0007M11f Hordeum vulgare seedl... 127 3e-027
gb|AV918572.1|AV918572 AV918572 K. Sato unpublished cDNA li... 127 3e-027
gb|AV930365.1|AV930365 AV930365 K. Sato unpublished cDNA li... 127 3e-027
gb|BJ466285.1|BJ466285 BJ466285 K. Sato unpublished cDNA li... 127 3e-027
gb|CA012990.1|CA012990 HT07B01r HT Hordeum vulgare subsp. v... 125 1e-026
gb|AL504419.1|AL504419 AL504419 Hordeum vulgare Barke roots... 121 2e-025
gb|CV061189.1|CV061189 BNEL65h6 Barley EST endosperm librar... 121 2e-025
gb|BG414971.1|BG414971 HVSMEk0004I03f Hordeum vulgare testa... 119 7e-025
gb|BI957138.1|BI957138 HVSMEn0007L07f Hordeum vulgare rachi... 117 3e-024
gb|BQ665967.1|BQ665967 HZ01L16u HZ Hordeum vulgare subsp. v... 117 3e-024
gb|BI779022.2|BI779022 EBro01_SQ002_J19_R root, 3 week, hyd... 117 3e-024
gb|BU995821.1|BU995821 HM11H13r HM Hordeum vulgare subsp. v... 117 3e-024
gb|AV920051.1|AV920051 AV920051 K. Sato unpublished cDNA li... 113 4e-023
gb|BI959339.1|BI959339 HVSMEn0019E20f Hordeum vulgare rachi... 109 7e-022
gb|AV918571.1|AV918571 AV918571 K. Sato unpublished cDNA li... 109 7e-022
gb|AV919198.1|AV919198 AV919198 K. Sato unpublished cDNA li... 109 7e-022
gb|AV934882.1|AV934882 AV934882 K. Sato unpublished cDNA li... 109 7e-022
gb|AV936150.1|AV936150 AV936150 K. Sato unpublished cDNA li... 109 7e-022
gb|BM370580.2|BM370580 EBro08_SQ004_K11_R root, 3 week, dro... 109 7e-022
gb|BQ766406.1|BQ766406 EBro08_SQ005_L20_R root, 3 week, dro... 109 7e-022
gb|BQ463573.1|BQ463573 HI05L24r HI Hordeum vulgare subsp. v... 105 1e-020
gb|BQ663315.1|BQ663315 HU02B19u HU Hordeum vulgare subsp. v... 105 1e-020
gb|BQ660846.1|BQ660846 HI05L24u HI Hordeum vulgare subsp. v... 101 2e-019
gb|AL499724.1|AL499724 AL499724 Hordeum vulgare Barke etiol... 100 7e-019
gb|BG417165.1|BG417165 HVSMEk0016J06f Hordeum vulgare testa... 100 7e-019
gb|BF259974.3|BF259974 HVSMEf0020M07f Hordeum vulgare seedl... 100 7e-019
gb|AV926207.1|AV926207 AV926207 K. Sato unpublished cDNA li... 100 7e-019
gb|AV926208.1|AV926208 AV926208 K. Sato unpublished cDNA li... 100 7e-019
gb|BF255020.3|BF255020 HVSMEf0005K21f Hordeum vulgare seedl... 92 2e-016
gb|AV923333.1|AV923333 AV923333 K. Sato unpublished cDNA li... 92 2e-016
gb|AV928513.1|AV928513 AV928513 K. Sato unpublished cDNA li... 92 2e-016
gb|BQ739972.1|BQ739972 HB107G12 HB Hordeum vulgare subsp. v... 92 2e-016
gb|BU984513.1|BU984513 HF04C11r HF Hordeum vulgare subsp. v... 92 2e-016
gb|AV930906.1|AV930906 AV930906 K. Sato unpublished cDNA li... 90 7e-016
gb|AV931092.1|AV931092 AV931092 K. Sato unpublished cDNA li... 90 7e-016
gb|AV931093.1|AV931093 AV931093 K. Sato unpublished cDNA li... 90 7e-016
gb|BQ663566.1|BQ663566 HU03C22u HU Hordeum vulgare subsp. v... 90 7e-016
gb|BI776485.2|BI776485 EBpi05_SQ001_J01_R pistil, 8 DPA, no... 90 7e-016
gb|BU967165.1|BU967165 HB03H16r BC Hordeum vulgare subsp. v... 90 7e-016
gb|BU967242.1|BU967242 HB03K11r BC Hordeum vulgare subsp. v... 90 7e-016
gb|BU986849.1|BU986849 HF13B10r HF Hordeum vulgare subsp. v... 90 7e-016
gb|CA011082.1|CA011082 HT07B01u HT Hordeum vulgare subsp. v... 90 7e-016
gb|CA015920.1|CA015920 HV11G20u HV Hordeum vulgare subsp. v... 90 7e-016
gb|CA017356.1|CA017356 HV12L21u HV Hordeum vulgare subsp. v... 90 7e-016
gb|CB860194.1|CB860194 HI12P13w HI Hordeum vulgare subsp. v... 90 7e-016
gb|CB876338.1|CB876338 HX10P19w HX Hordeum vulgare subsp. v... 90 7e-016
gb|BE060794.1|BE060794 HVSMEg0013G05f Hordeum vulgare pre-a... 88 3e-015
gb|BI960696.1|BI960696 HVSMEn0025O11f Hordeum vulgare rachi... 88 3e-015
gb|CA031458.1|CA031458 HX10A06r HX Hordeum vulgare subsp. v... 88 3e-015
gb|AV836682.1|AV836682 AV836682 K. Sato unpublished cDNA li... 86 1e-014
gb|BF624748.2|BF624748 HVSMEa0017K05f Hordeum vulgare seedl... 86 1e-014
gb|BI958555.1|BI958555 HVSMEn0015J16f Hordeum vulgare rachi... 86 1e-014
gb|CK124710.1|CK124710 BES1824110c01 BES1824 Hordeum vulgar... 86 1e-014
gb|BG300950.1|BG300950 HVSMEb0019A22f Hordeum vulgare seedl... 84 4e-014
gb|BI949437.1|BI949437 HVSMEl0013O09f Hordeum vulgare spike... 84 4e-014
gb|BI955734.1|BI955734 HVSMEm0024E12f Hordeum vulgare green... 84 4e-014
gb|AV917031.1|AV917031 AV917031 K. Sato unpublished cDNA li... 84 4e-014
gb|AJ462437.1|AJ462437 AJ462437 S00002 Hordeum vulgare subs... 84 4e-014
gb|BU971759.1|BU971759 HB19J12r BC Hordeum vulgare subsp. v... 84 4e-014
gb|CA025840.1|CA025840 HZ53E19r HZ Hordeum vulgare subsp. v... 84 4e-014
gb|BI956663.1|BI956663 HVSMEn0004K08f Hordeum vulgare rachi... 82 2e-013
gb|BG343763.2|BG343763 HVSMEg0006L01f Hordeum vulgare pre-a... 82 2e-013
gb|BQ468619.1|BQ468619 HM01M13T HM Hordeum vulgare subsp. v... 82 2e-013
gb|AW982533.3|AW982533 HVSMEg0003I09f Hordeum vulgare pre-a... 80 6e-013
gb|BQ765797.1|BQ765797 EBro03_SQ008_O01_R root, 3 week, wat... 80 6e-013
gb|BU994416.1|BU994416 HM07A02r HM Hordeum vulgare subsp. v... 80 6e-013
gb|CA019440.1|CA019440 HV11P23r HV Hordeum vulgare subsp. v... 80 6e-013
gb|BI956967.1|BI956967 HVSMEn0006I08f Hordeum vulgare rachi... 78 2e-012
gb|AV923841.1|AV923841 AV923841 K. Sato unpublished cDNA li... 78 2e-012
gb|BJ464018.1|BJ464018 BJ464018 K. Sato unpublished cDNA li... 78 2e-012
gb|CB882206.1|CB882206 HL01D01w HL Hordeum vulgare subsp. v... 78 2e-012
gb|BE193304.2|BE193304 HVSMEh0080I07f Hordeum vulgare 5-45 ... 74 4e-011
gb|BI956476.1|BI956476 HVSMEn0003J21f Hordeum vulgare rachi... 74 4e-011
gb|BI958142.1|BI958142 HVSMEn0013J15f Hordeum vulgare rachi... 74 4e-011
gb|BJ447591.1|BJ447591 BJ447591 K. Sato unpublished cDNA li... 74 4e-011
gb|BQ468970.1|BQ468970 HM02P11r HM Hordeum vulgare subsp. v... 74 4e-011
gb|BF265178.2|BF265178 HV_CEa0011H21f Hordeum vulgare seedl... 72 2e-010
gb|BQ661984.1|BQ661984 HR01B16u HR Hordeum vulgare subsp. v... 72 2e-010
gb|AL501744.1|AL501744 AL501744 Hordeum vulgare Barke roots... 70 6e-010
gb|AV927219.1|AV927219 AV927219 K. Sato unpublished cDNA li... 70 6e-010
gb|CB883651.1|CB883651 HQ02O03w HQ Hordeum vulgare subsp. v... 70 6e-010
gb|BF253907.1|BF253907 HVSMEf0002H08f Hordeum vulgare seedl... 68 2e-009
gb|CA017986.1|CA017986 HV07A23r HV Hordeum vulgare subsp. v... 68 2e-009
gb|CA026701.1|CA026701 HZ56L02r HZ Hordeum vulgare subsp. v... 68 2e-009
gb|BG368813.1|BG368813 HVSMEi0020M13f Hordeum vulgare 20 DA... 66 9e-009
gb|BI956427.1|BI956427 HVSMEn0003E14f Hordeum vulgare rachi... 66 9e-009
gb|AV923682.1|AV923682 AV923682 K. Sato unpublished cDNA li... 64 4e-008
gb|BJ463805.1|BJ463805 BJ463805 K. Sato unpublished cDNA li... 64 4e-008
gb|BQ661318.1|BQ661318 HM02P11u HM Hordeum vulgare subsp. v... 64 4e-008
gb|BM372877.2|BM372877 EBma04_SQ002_E01_R maternal, 10 DPA,... 64 4e-008
gb|CA020225.1|CA020225 HV14L03r HV Hordeum vulgare subsp. v... 64 4e-008
gb|BF624752.2|BF624752 HVSMEa0017K09f Hordeum vulgare seedl... 60 6e-007
gb|CA024787.1|CA024787 HZ50E24r HZ Hordeum vulgare subsp. v... 60 6e-007
gb|BQ465804.1|BQ465804 HU04L18r HU Hordeum vulgare subsp. v... 58 2e-006
gb|BQ469182.1|BQ469182 HM03K08r HM Hordeum vulgare subsp. v... 58 2e-006
gb|BU967435.1|BU967435 HB04E22r BC Hordeum vulgare subsp. v... 58 2e-006
gb|BU996252.1|BU996252 HM13A10r HM Hordeum vulgare subsp. v... 58 2e-006
gb|CA009062.1|CA009062 HU13B03r HU Hordeum vulgare subsp. v... 58 2e-006
gb|CA009625.1|CA009625 HU14K11r HU Hordeum vulgare subsp. v... 58 2e-006
gb|CA031702.1|CA031702 HX10O05r HX Hordeum vulgare subsp. v... 58 2e-006
gb|BE195554.3|BE195554 HVSMEh0089G13f Hordeum vulgare 5-45 ... 56 9e-006
gb|BI960202.1|BI960202 HVSMEn0023K20f Hordeum vulgare rachi... 54 4e-005
gb|CA023762.1|CA023762 HZ47F10r HZ Hordeum vulgare subsp. v... 54 4e-005
gb|BQ468579.1|BQ468579 HM01K12T HM Hordeum vulgare subsp. v... 52 1e-004
gb|BM442929.2|BM442929 EBro02_SQ001_O08_R root, 3 week, hyd... 52 1e-004
gb|BG299430.2|BG299430 HVSMEa0019P14f Hordeum vulgare seedl... 50 6e-004
gb|BG366351.1|BG366351 HVSMEi0006M09f Hordeum vulgare 20 DA... 50 6e-004
gb|BQ469880.1|BQ469880 HX01C05T HX Hordeum vulgare subsp. v... 50 6e-004
gb|CA027985.1|CA027985 HZ60K07r HZ Hordeum vulgare subsp. v... 50 6e-004
gb|BI959331.1|BI959331 HVSMEn0019E12f Hordeum vulgare rachi... 48 0.002
gb|BF259601.3|BF259601 HVSMEf0019M06f Hordeum vulgare seedl... 48 0.002
gb|BQ471177.1|BQ471177 HV01F24T HV Hordeum vulgare subsp. v... 48 0.002
gb|BI948539.1|BI948539 HVSMEl0010A07f Hordeum vulgare spike... 46 0.009
gb|BU988138.1|BU988138 HF16M09r HF Hordeum vulgare subsp. v... 46 0.009
gb|AV925770.1|AV925770 AV925770 K. Sato unpublished cDNA li... 44 0.035
gb|CA025257.1|CA025257 HZ51J24r HZ Hordeum vulgare subsp. v... 44 0.035
gb|AW982722.1|AW982722 HVSMEg0004A13f Hordeum vulgare pre-a... 42 0.14
gb|BG300882.1|BG300882 HVSMEb0018M20f Hordeum vulgare seedl... 42 0.14
gb|BG301023.1|BG301023 HVSMEb0019E17f Hordeum vulgare seedl... 42 0.14
gb|BI952301.1|BI952301 HVSMEm0005N03f Hordeum vulgare green... 42 0.14
gb|BE060167.3|BE060167 HVSMEg0011C02f Hordeum vulgare pre-a... 42 0.14
gb|AV916668.1|AV916668 AV916668 K. Sato unpublished cDNA li... 42 0.14
gb|AV921958.1|AV921958 AV921958 K. Sato unpublished cDNA li... 42 0.14
gb|AJ461272.1|AJ461272 AJ461272 S00002 Hordeum vulgare subs... 42 0.14
gb|BJ466234.1|BJ466234 BJ466234 K. Sato unpublished cDNA li... 42 0.14
gb|BJ466275.1|BJ466275 BJ466275 K. Sato unpublished cDNA li... 42 0.14
gb|BQ470133.1|BQ470133 HX01N23T HX Hordeum vulgare subsp. v... 42 0.14
gb|BQ662661.1|BQ662661 HS03I20u HS Hordeum vulgare subsp. v... 42 0.14
gb|BQ663878.1|BQ663878 HU04H05u HU Hordeum vulgare subsp. v... 42 0.14
gb|BQ665035.1|BQ665035 HX01N23w HX Hordeum vulgare subsp. v... 42 0.14
gb|BQ665922.1|BQ665922 HZ01J09u HZ Hordeum vulgare subsp. v... 42 0.14
gb|BQ755911.1|BQ755911 EBed07_SQ003_N24_R endosperm, 28 DPA... 42 0.14
gb|BQ767053.1|BQ767053 EBro08_SQ007_H22_R root, 3 week, dro... 42 0.14
gb|BU973068.1|BU973068 HB23K12r BC Hordeum vulgare subsp. v... 42 0.14
gb|BU975933.1|BU975933 HB32L24r BC Hordeum vulgare subsp. v... 42 0.14
gb|BU982910.1|BU982910 HA27P11r HA Hordeum vulgare subsp. v... 42 0.14
gb|CA001387.1|CA001387 HS18E06u HS Hordeum vulgare subsp. v... 42 0.14
gb|CA006840.1|CA006840 HU05N14r HU Hordeum vulgare subsp. v... 42 0.14
gb|CA015353.1|CA015353 HT14A20r HT Hordeum vulgare subsp. v... 42 0.14
gb|CA019477.1|CA019477 HV12B23r HV Hordeum vulgare subsp. v... 42 0.14
gb|CA032994.1|CA032994 HX14M21r HX Hordeum vulgare subsp. v... 42 0.14
gb|CB875529.1|CB875529 HX08J11w HX Hordeum vulgare subsp. v... 42 0.14
>gb|BF260649.2|BF260649 HVSMEf0022J05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0022J05f, mRNA sequence
Length = 804
Score = 969 bits (489), Expect = 0.0
Identities = 670/731 (91%)
Strand = Plus / Minus
Query: 1746 cagcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatcatat 1805
|||||| ||| | |||||||| ||||||||| |||||| ||||| || |||||||||||
Sbjct: 737 cagcagttctaaccaacaatggtaggttccaaatcagcctcagttaatacaggatcatag 678
Query: 1806 ccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggaccctgaatg 1865
|||||||| |||||||| |||| |||||||||| || ||||| | |||||| ||||||
Sbjct: 677 ccatacaaggcctgcctgttgancaagcatcctgtcccgacatacattggaccntgaatg 618
Query: 1866 ccatctagacctttcatgttgatatcaaagaagactatgttccgattagcatatcgatcg 1925
||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 617 ccatctaaacctttcatgttgatatcaaagaaaactatgttgcgattagcatatcgatcg 558
Query: 1926 tgcaagtcaatgccatcaaatctttgtggaaattgtacataacaagttttccttcctaga 1985
||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 557 tgcaaatcaatgccatcaaatctttgtggaaattggacatagcaagtcttccttcctaga 498
Query: 1986 gctggatccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatgg 2045
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 497 gcgggatccatcatgaagcacattgcttctctaagagctttgctgctattgaagtagtga 438
Query: 2046 tcacaatccacattgagaagataggcaccatttgtcagcacagcagatacacgaatcagt 2105
|||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 437 tcacaatccacattaagaagataggcaccatttgtcaacacagcagatacgcgaatcagt 378
Query: 2106 gcattcattgcaccagccttcttgtgatgctgaaagcctggtctcttttcacgagagaca 2165
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 377 gcattcattgcaccagccttcttgtgatgctggaaacctggtctcttttcacgagagaca 318
Query: 2166 tagacaagacgtggtaattcatttccatcagtgtcaagcccaccactgtgccccaagaac 2225
|| ||||| ||||| || ||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 317 tacacaagccgtggcaactcattaccatcagtgtcaaggccaccactgtgccccaagaac 258
Query: 2226 acctgaatcatgccaggatggtccctagggttattcccaggccaagcagttccatcagcc 2285
||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 257 acctgaatcatgccaggatggtccctagggttattcccaggccaagcggtgccatcggcc 198
Query: 2286 atggtccacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttatt 2345
||||||||||||||||| |||||||| || |||||||||||||| || ||||||| ||||
Sbjct: 197 atggtccacccctcttcgggcactttttgggctttggcaacaagtgcgttgattcgtatt 138
Query: 2346 ttgaattcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaatt 2405
|| ||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 137 ttaaattcttcatactctctcttcattgctcgcctttccttcacaaaagaaggctgaatt 78
Query: 2406 ttgtccttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaata 2465
|||||||||||||||||||||||||| ||||||||| ||||| || |||||||||||
Sbjct: 77 ttgtccttcaggtaatctattttttgctgaaagtaaaactctggggcccttggttcaatg 18
Query: 2466 ttgtgcttctt 2476
|||||||||||
Sbjct: 17 ttgtgcttctt 7
>gb|BQ768380.1|BQ768380 EBro08_SQ011_E16_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_E16 5', mRNA sequence
Length = 729
Score = 922 bits (465), Expect = 0.0
Identities = 660/725 (91%)
Strand = Plus / Minus
Query: 1476 acatggatagcttccttcagtagagaagctgggtttgttgaaggtggtatgccaccttga 1535
|||||||| |||||||| ||||| ||||||||||| ||||||||||||||||| | ||||
Sbjct: 725 acatggatggcttcctttagtagggaagctgggttcgttgaaggtggtatgcctctttga 666
Query: 1536 gtcataaaggtggatgcaatgaagattggagactgaccaaagcgtttctccaatttcctc 1595
|||||||||||||||||| | || || |||||||||||||| |||||||||||| || ||
Sbjct: 665 gtcataaaggtggatgcagtaaatataggagactgaccaaatcgtttctccaatctcttc 606
Query: 1596 tgggacataagcactgacctttcatcctcataaccttcaataccctcctcgatgtcttcc 1655
||||||||||||| ||||||||||||||||||||||| || ||||| || || || |||
Sbjct: 605 tgggacataagcatggacctttcatcctcataaccttctattccctcttctatatcatcc 546
Query: 1656 atgttaaagatgggagctgaagattctgttctcttcataatacggctttgactatccata 1715
||||| ||||||||||| ||||| || ||||||||||| |||||| ||| ||||||||
Sbjct: 545 atgttgaagatgggagcagaagactcagttctcttcatcatacggtttttgttatccata 486
Query: 1716 taactcttgttctttctcttccttctaccacagcagctcttaacaacaatgttaggttcc 1775
|| |||||||||||| |||| || | ||||||||||||||||||||||||||||||||||
Sbjct: 485 tagctcttgttctttttctttctgccaccacagcagctcttaacaacaatgttaggttcc 426
Query: 1776 agatcagcttcagtcaaaacaggatcatatccatacaaagcctgcctattgaaacagcat 1835
| |||||||||||| || ||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 425 aaatcagcttcagttaatacaggatcatagccatacaaggcctgcctattgaaacagcat 366
Query: 1836 cctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatcaaag 1895
|||||||| ||||| | |||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 365 cctgttccgacatacattggaccttgaatgccatctaaacctttcatgttgatatcaaag 306
Query: 1896 aagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctttgtgga 1955
|| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 305 aaaactatgttgcgattagcatatcgatcgtgcaaatcaatgccatcaaatctttgtgga 246
Query: 1956 aattgtacataacaagttttccttcctagagctggatccatcatgaagcacattgcttct 2015
||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 245 aattggacatagcaagttttccttcttagagcgggatccatcatgaagcacattgcttct 186
Query: 2016 ctaagagctttgctgctattgaagtaatggtcacaatccacattgagaagataggcacca 2075
|||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 185 ctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagataggcacca 126
Query: 2076 tttgtcagcacagcagatacacgaatcagtgcattcattgcaccagccttcttgtgatgc 2135
|| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ttcgtcaacacagcagatacgcgaatcagtgcattcattgcaccagccttcttgtgatgc 66
Query: 2136 tgaaagcctggtctcttttcacgagagacatagacaagacgtggtaattcatttccatca 2195
|| || |||||||||||||||||||||||||| ||||| ||||| || ||||| ||||||
Sbjct: 65 tggaaacctggtctcttttcacgagagacatacacaagccgtggcaactcattaccatca 6
Query: 2196 gtgtc 2200
|||||
Sbjct: 5 gtgtc 1
>gb|CB882157.1|CB882157 HL01A17w HL Hordeum vulgare subsp. vulgare cDNA clone HL01A17
3-PRIME, mRNA sequence
Length = 652
Score = 872 bits (440), Expect = 0.0
Identities = 596/647 (92%), Gaps = 1/647 (0%)
Strand = Plus / Minus
Query: 1889 atcaaagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatct 1948
||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 652 atcaaagaaaactatgtgncgattagcatatcgatcgtgcaaatcaatgccatcaaatct 593
Query: 1949 ttgtggaaattgtacataacaagttttccttcctagagctggatccatcatgaagcacat 2008
|||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 592 ttgtggaaattggacatagcaagtcttccttcctagagcgggatccatcatgaagcacat 533
Query: 2009 tgcttctctaagagctttgctgctattgaagtaatggtcacaatccacattgagaagata 2068
||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 532 tgcttctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 473
Query: 2069 ggcaccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagccttctt 2128
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 472 ggcaccatttgtcaacacagcagatacgcgaatcagtgcattcattgcaccagccttctt 413
Query: 2129 gtgatgctgaaagcctggtctcttttcacgagagacatagacaagacgtggtaattcatt 2188
||||||||| || |||||||||||||||||||||||||| ||||| ||||| || |||||
Sbjct: 412 gtgatgctggaaacctggtctcttttcacgagagacatacacaagccgtggcaactcatt 353
Query: 2189 tccatcagtgtcaagcccaccactgtgccccaagaacacctgaatcatgccaggatggtc 2248
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 accatcagtgtcaaggccaccactgtgccccaagaacacctgaatcatgccaggatggtc 293
Query: 2249 cctagggttattcccaggccaagcagttccatcagccatggtccacccctcttcaggcac 2308
|||||||||||||||||||||||| || ||||| |||||||||||||||||||| |||||
Sbjct: 292 cctagggttattcccaggccaagcggtgccatcggccatggtccacccctcttcgggcac 233
Query: 2309 tttctgtgctttggcaacaagggcattgattcttattttgaattcttcatactctctctt 2368
||| || |||||||||||||| || ||||||| |||||| ||||||||||||||||||||
Sbjct: 232 tttttgggctttggcaacaagtgcgttgattcgtattttaaattcttcatactctctctt 173
Query: 2369 cattgctcgtctttccttaacaaatgaaggttgaattttgtccttcaggtaatctatttt 2428
||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 172 cattgctcgcctttccttcacaaaagaaggctgaattttgtccttcaggtaatctatttt 113
Query: 2429 ttgagcaaagtaaaattctggagctcttggttcaatattgtgcttcttacaaaagggaac 2488
||| ||||||||| ||||| || ||||||||||| ||||||||||| || || || ||
Sbjct: 112 ttgctgaaagtaaaactctggggcccttggttcaatgttgtgcttcttgcagaatgg-ac 54
Query: 2489 ccactttctagcaaattcggcagtttcagagagagactcaaaagtca 2535
|||||| ||||||||||| |||||||| ||||| |||||||| ||||
Sbjct: 53 ccacttcctagcaaattctgcagtttctgagagcgactcaaacgtca 7
>gb|BF263370.1|BF263370 HV_CEa0006J03f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006J03f, mRNA sequence
Length = 848
Score = 803 bits (405), Expect = 0.0
Identities = 675/765 (88%)
Strand = Plus / Minus
Query: 1065 ccagcataattactaatctcaggaatgataaatttattggtaagaagacagatagcagga 1124
||||||| |||||| |||||||||||||||| || ||||| || || |||||||||||
Sbjct: 765 ccagcattattactgatctcaggaatgataaccttgttggtgaggagccagatagcaggg 706
Query: 1125 agcacacaataggcgataagcggaacagatgtgattggataaacaatggtgttaatgtaa 1184
||| |||||||||||||||| || | ||||| |||||||||||||||||||| ||||||
Sbjct: 705 agcccacaataggcgataagtgggagggatgttattggataaacaatggtgttgatgtaa 646
Query: 1185 gccagcctctccaaaagcttcaatcgcccattgtagccataccatataggacaatgtctg 1244
|||| |||||||| ||| ||||| |||||| ||| ||||| |||||||||||||||
Sbjct: 645 gccaccctctccagaagtttcaaccgcccaccgtaattgtaccagataggacaatgtctg 586
Query: 1245 ctaagcagaatttccactgacccaagagcccaacggagcacctgattaagacgatcagaa 1304
|||| ||||||||| |||||||| |||||||| || ||||| ||||||||||| |||||
Sbjct: 585 ctaaacagaatttcaactgacccgagagcccatcgcagcacttgattaagacggtcagac 526
Query: 1305 agattgataggtgcagaacccttgaaacaaggtcgtggtggcatgcagtagattgattgc 1364
|||||||| || |||||||||||||||||||| ||||||||||| |||||||||||| |
Sbjct: 525 agattgattggcgcagaacccttgaaacaaggccgtggtggcatacagtagattgatatc 466
Query: 1365 cagcctcttgcatgcattttaaacccagtcagaatatcctctgtaactgaaccatagatc 1424
|| |||||||| ||||||||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 465 caacctcttgcgtgcattttaaacccagtaagaatatcttcagtaactgaaccatagatc 406
Query: 1425 cagccaatctcttttccccattcagttttgtcctcgtacccacagctgataacatggata 1484
||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||
Sbjct: 405 cagccaatctcttttccccattcggttttgtcctcatatccacagctgatgacatggatg 346
Query: 1485 gcttccttcagtagagaagctgggtttgttgaaggtggtatgccaccttgagtcataaag 1544
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 345 gcttcctttagtagagaagctgggtttgttgaaggtggtatgcctccttgagtcataaag 286
Query: 1545 gtggatgcaatgaagattggagactgaccaaagcgtttctccaatttcctctgggacata 1604
||||||||| | || || |||||||| ||||| |||||||||||| || |||||||||||
Sbjct: 285 gtggatgcagtaaatataggagactggccaaatcgtttctccaatctcttctgggacata 226
Query: 1605 agcactgacctttcatcctcataaccttcaataccctcctcgatgtcttccatgttaaag 1664
|||| ||||||||||||||||||||||| |||||||| || || ||||||||||| |||
Sbjct: 225 agcatcgacctttcatcctcataaccttctataccctcttctatatcttccatgttgaag 166
Query: 1665 atgggagctgaagattctgttctcttcataatacggctttgactatccatataactcttg 1724
|||||||| ||||| || ||||||||||| || ||| ||| |||||||||| ||||||
Sbjct: 165 atgggagcagaagactcagttctcttcatcatgcggtttttgttatccatatagctcttg 106
Query: 1725 ttctttctcttccttctaccacagcagctcttaacaacaatgttaggttccagatcagct 1784
|||||| |||| || | ||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 105 ttctttttctttctgccaccgcagcagctcttaacaacaatgttaggttccaaatcagcc 46
Query: 1785 tcagtcaaaacaggatcatatccatacaaagcctgcctattgaaa 1829
||||| || ||||||||||| |||||||| |||||||| ||||||
Sbjct: 45 tcagttaatacaggatcatagccatacaaggcctgcctgttgaaa 1
>gb|BG343963.1|BG343963 HVSMEg0007D23f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007D23f, mRNA sequence
Length = 786
Score = 753 bits (380), Expect = 0.0
Identities = 663/755 (87%), Gaps = 2/755 (0%)
Strand = Plus / Minus
Query: 948 ccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacaccactccat 1007
||||||| |||||| |||||||| ||||||||||| || || ||||| ||||||||||||
Sbjct: 767 ccaccaaaaacccagaactgctcgtttctccaccagtcctcgatgccgacaccactccat 708
Query: 1008 ctgagctccaatatacca-gtggcgaaaatggaggcgaaaagaagaatgaagaacattcc 1066
| |||||| |||||| ||||| || |||||||| | | |||||| | ||||| ||
Sbjct: 707 cgcagctcccntataccccgtggcaaagatggaggcaaccataagaataagcaacatccc 648
Query: 1067 -agcataattactaatctcaggaatgataaatttattggtaagaagacagatagcaggaa 1125
|||||| ||||| ||||| |||||||||||||| ||||| || ||||||||||||||||
Sbjct: 647 cagcatagttactgatctcgggaatgataaatttgttggtgaggagacagatagcaggaa 588
Query: 1126 gcacacaataggcgataagcggaacagatgtgattggataaacaatggtgttaatgtaag 1185
||||||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||
Sbjct: 587 gcacacaataggcgataagtggaagggatgttattggataaacaatggtgttgatgtaag 528
Query: 1186 ccagcctctccaaaagcttcaatcgcccattgtagccataccatataggacaatgtctgc 1245
||| |||||||| ||| ||||| |||||| ||| ||||| ||||||||||||||||
Sbjct: 527 ccatcctctccagaagtttcaaccgcccaccgtaattgtaccagataggacaatgtctgc 468
Query: 1246 taagcagaatttccactgacccaagagcccaacggagcacctgattaagacgatcagaaa 1305
||| ||||||||| ||||||||||||||||| ||||| || ||||| ||||| ||||| |
Sbjct: 467 taaacagaatttcaactgacccaagagcccaccggagaacttgattgagacggtcagaga 408
Query: 1306 gattgataggtgcagaacccttgaaacaaggtcgtggtggcatgcagtagattgattgcc 1365
||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 407 gattgattggcgcagaacccttgaaacaaggtcgtggtggcatgcagtagattgatatcc 348
Query: 1366 agcctcttgcatgcattttaaacccagtcagaatatcctctgtaactgaaccatagatcc 1425
| |||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||
Sbjct: 347 aacctcttgcgtgcattttaaacccagtaagaatatcttcagtaactgaaccatagatcc 288
Query: 1426 agccaatctcttttccccattcagttttgtcctcgtacccacagctgataacatggatag 1485
|||||||||||||||||||||| ||||||||||| || ||||||||||| |||||||| |
Sbjct: 287 agccaatctcttttccccattcggttttgtcctcatatccacagctgatgacatggatgg 228
Query: 1486 cttccttcagtagagaagctgggtttgttgaaggtggtatgccaccttgagtcataaagg 1545
||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 227 cttcctttagtagggaagctgggttcgttgaaggtggtatgcctccttgagtcataaagg 168
Query: 1546 tggatgcaatgaagattggagactgaccaaagcgtttctccaatttcctctgggacataa 1605
|||||||| | || || |||||||||||||| |||||||||||| || ||||||||||||
Sbjct: 167 tggatgcagtaaatataggagactgaccaaatcgtttctccaatctcttctgggacataa 108
Query: 1606 gcactgacctttcatcctcataaccttcaataccctcctcgatgtcttccatgttaaaga 1665
||| ||||||||||||||||||||||| || ||||| || || || |||||||| ||||
Sbjct: 107 gcatggacctttcatcctcataaccttctattccctcttctatatcatccatgttgaaga 48
Query: 1666 tgggagctgaagattctgttctcttcataatacgg 1700
||||||| ||||| || ||||||||||| ||||||
Sbjct: 47 tgggagcagaagactcagttctcttcatcatacgg 13
>gb|CA015150.1|CA015150 HT13H01r HT Hordeum vulgare subsp. vulgare cDNA clone HT13H01
5-PRIME, mRNA sequence
Length = 526
Score = 702 bits (354), Expect = 0.0
Identities = 483/526 (91%)
Strand = Plus / Minus
Query: 2088 gcagatacacgaatcagtgcattcattgcaccagccttcttgtgatgctgaaagcctggt 2147
|||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 526 gcagatacgcgaatcagtgcattcattgcaccagccttcttgtgatgctggaaacctggt 467
Query: 2148 ctcttttcacgagagacatagacaagacgtggtaattcatttccatcagtgtcaagccca 2207
|||||||||||||||||||| ||||| ||||| || ||||| |||||||||||||| |||
Sbjct: 466 ctcttttcacgagagacatacacaagccgtggcaactcattaccatcagtgtcaaggcca 407
Query: 2208 ccactgtgccccaagaacacctgaatcatgccaggatggtccctagggttattcccaggc 2267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ccactgtgccccaagaacacctgaatcatgccaggatggtccctagggttattcccaggc 347
Query: 2268 caagcagttccatcagccatggtccacccctcttcaggcactttctgtgctttggcaaca 2327
||||| || ||||| |||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 346 caagcggtgccatcggccatggtccacccctcttcgggcactttttgggctttggcaaca 287
Query: 2328 agggcattgattcttattttgaattcttcatactctctcttcattgctcgtctttcctta 2387
|| || ||||||| |||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 286 agtgcgttgattcgtattttaaattcttcatactctctcttcattgctcgcctttccttc 227
Query: 2388 acaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaaagtaaaattct 2447
||||| ||||| |||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 226 acaaaagaaggctgaattttgtccttcaggtaatctattttttgctgaaagtaaaactct 167
Query: 2448 ggagctcttggttcaatattgtgcttcttacaaaagggaacccactttctagcaaattcg 2507
|| || ||||||||||| ||||||||||| || || ||||||||||| |||||||||||
Sbjct: 166 ggggcccttggttcaatgttgtgcttcttgcagaatggaacccacttcctagcaaattct 107
Query: 2508 gcagtttcagagagagactcaaaagtcagcatagctgagccatcatcagaaacatagcat 2567
|||||||| ||||| |||||||| |||| |||||| || |||||||||||||||||||||
Sbjct: 106 gcagtttctgagagcgactcaaacgtcaacatagccgaaccatcatcagaaacatagcat 47
Query: 2568 gacactttgtcaacagggtaatccacagcaagaatggacaaaacag 2613
||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 46 gacactttgtcgacagggtaatccacagcaagaatggacagaacag 1
>gb|BJ453328.1|BJ453328 BJ453328 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak42j03 5', mRNA sequence
Length = 685
Score = 668 bits (337), Expect = 0.0
Identities = 582/664 (87%)
Strand = Plus / Minus
Query: 640 ccatgagacccttgaggaaggggtagagatgaaggatcacccagatcgagaagaacagct 699
||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||
Sbjct: 685 ccatgagacccttgaggaaggggtagagatggaggatcacccagattgagaagaagagct 626
Query: 700 ttccaaagagcggaccccaggattggtagccgctgttaatggcatacgaaattcctgcca 759
||||||||||||| |||||||||||||| |||||||| ||||| || || || |||||||
Sbjct: 625 ttccaaagagcgggccccaggattggtaaccgctgttgatggcgtatgatatgcctgcca 566
Query: 760 ccattccgaccaggttaatgacaagaacagtggtcggagggatgagcaaactggtccact 819
|||| || |||||||| || || || || ||||||||||||||||| | |||||||||||
Sbjct: 565 ccatgcccaccaggttgatcacgaggacggtggtcggagggatgaggagactggtccact 506
Query: 820 tgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtga 879
||||||| |||||||| ||||||||||| ||||| || |||||| |||||||| ||||
Sbjct: 505 tgaacacgtatagctctgcaaagtcgccgtcctcgtcgtttgccttggaggtaaccgtga 446
Query: 880 agttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaagagatggg 939
||||||| || |||||||||| ||| || ||||||||||||||||||||||| |||||||
Sbjct: 445 agttggtgtcgatcccagccagcaccttgagcagaccctggaacaccgcgaaaagatggg 386
Query: 940 cagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacac 999
|||| ||||||||||| |||||||||||||| ||||||||||| || || ||||| ||||
Sbjct: 385 cagacgtgccaccaatgacccaaaactgctcgtttctccaccagtcctcgatgccgacac 326
Query: 1000 cactccatctgagctccaatataccagtggcgaaaatggaggcgaaaagaagaatgaaga 1059
||||||||| ||||||||||||||||||||| |||||||| || || | ||||| ||||
Sbjct: 325 cactccatcggagctccaatataccagtggcaaaaatggacgcaaacatgagaataaaga 266
Query: 1060 acattccagcataattactaatctcaggaatgataaatttattggtaagaagacagatag 1119
|||| |||||||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 265 acatcccagcataattactgatctcaggaatgataaacttgttggtgaggaggcagatag 206
Query: 1120 caggaagcacacaataggcgataagcggaacagatgtgattggataaacaatggtgttaa 1179
|||| |||||||||||||||||||| || | ||||| |||||||||||||||||||| |
Sbjct: 205 cagggagcacacaataggcgataagtgggagggatgttattggataaacaatggtgttga 146
Query: 1180 tgtaagccagcctctccaaaagcttcaatcgcccattgtagccataccatataggacaat 1239
||||||||| |||||||| ||| ||||| |||||| ||| ||||| ||||||||||
Sbjct: 145 tgtaagccaccctctccagaagtttcaaccgcccaccgtaattgtaccagataggacaat 86
Query: 1240 gtctgctaagcagaatttccactgacccaagagcccaacggagcacctgattaagacgat 1299
||||||||| ||||||||| |||||||| |||||||| || ||||| | ||||||||| |
Sbjct: 85 gtctgctaaacagaatttcaactgacccgagagcccatcgcagcacttnattaagacggt 26
Query: 1300 caga 1303
||||
Sbjct: 25 caga 22
>gb|BU972673.1|BU972673 HB22G06r BC Hordeum vulgare subsp. vulgare cDNA clone HB22G06
5-PRIME, mRNA sequence
Length = 655
Score = 654 bits (330), Expect = 0.0
Identities = 549/622 (88%)
Strand = Plus / Minus
Query: 822 aacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtgaag 881
||||| |||||||| ||||||||||| ||||| || |||||| |||||||| ||||||
Sbjct: 655 aacacgtatagctctgcaaagtcgccgtcctcgtcgtttgccttggaggtaaccgtgaag 596
Query: 882 ttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaagagatgggca 941
||||| || |||||||||| ||| || ||||||||||||||||||||||| |||||||||
Sbjct: 595 ttggtgtcgatcccagccagcaccttgagcagaccctggaacaccgcgaaaagatgggca 536
Query: 942 gaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacacca 1001
|| ||||||||||| |||||||||||||| ||||||||||| || || ||||| ||||||
Sbjct: 535 gacgtgccaccaatgacccaaaactgctcgtttctccaccagtcctcgatgccgacacca 476
Query: 1002 ctccatctgagctccaatataccagtggcgaaaatggaggcgaaaagaagaatgaagaac 1061
||||||| ||||||||||||||||||||| |||||||| || || | ||||| ||||||
Sbjct: 475 ctccatcggagctccaatataccagtggcaaaaatggacgcaaacatgagaataaagaac 416
Query: 1062 attccagcataattactaatctcaggaatgataaatttattggtaagaagacagatagca 1121
|| |||||||||||||| ||||||||||||||||| || ||||| || || |||||||||
Sbjct: 415 atcccagcataattactgatctcaggaatgataaacttgttggtgaggaggcagatagca 356
Query: 1122 ggaagcacacaataggcgataagcggaacagatgtgattggataaacaatggtgttaatg 1181
||||||||||||||||||||||| || | ||||| |||||||||||||||||||| |||
Sbjct: 355 ggaagcacacaataggcgataagtgggagggatgttattggataaacaatggtgttgatg 296
Query: 1182 taagccagcctctccaaaagcttcaatcgcccattgtagccataccatataggacaatgt 1241
||||||| |||||||| ||| ||||| |||||| ||| ||||| ||||||||||||
Sbjct: 295 taagccaccctctccagaagtttcaaccgcccaccgtaattgtaccagataggacaatgt 236
Query: 1242 ctgctaagcagaatttccactgacccaagagcccaacggagcacctgattaagacgatca 1301
||||||| ||||||||| |||||||| |||||||| || ||||| ||||||||||| |||
Sbjct: 235 ctgctaaacagaatttcaactgacccgagagcccatcgcagcacttgattaagacggtca 176
Query: 1302 gaaagattgataggtgcagaacccttgaaacaaggtcgtggtggcatgcagtagattgat 1361
|| |||||||| || |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 175 gacagattgattggcgcagaacccttgaaacaaggccgtggtggcatacagtagattgat 116
Query: 1362 tgccagcctcttgcatgcattttaaacccagtcagaatatcctctgtaactgaaccatag 1421
||| |||||||| ||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 115 atccaacctcttgcgtgcattttaaacccagtaagaatatcttcagtaactgaaccatag 56
Query: 1422 atccagccaatctcttttcccc 1443
||||||||||||||||||||||
Sbjct: 55 atccagccaatctcttttcccc 34
>gb|BQ472793.1|BQ472793 HB01H14r BC Hordeum vulgare subsp. vulgare cDNA clone HB01H14
5-PRIME, mRNA sequence
Length = 586
Score = 648 bits (327), Expect = 0.0
Identities = 513/575 (89%)
Strand = Plus / Minus
Query: 1086 ggaatgataaatttattggtaagaagacagatagcaggaagcacacaataggcgataagc 1145
||||||||||| || ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 586 ggaatgataaacttgttggtgaggaggcagatagcaggaagcacacaataggcgataagt 527
Query: 1146 ggaacagatgtgattggataaacaatggtgttaatgtaagccagcctctccaaaagcttc 1205
|| | ||||| |||||||||||||||||||| |||||||||| |||||||| ||| |||
Sbjct: 526 gggagggatgttattggataaacaatggtgttgatgtaagccaccctctccagaagtttc 467
Query: 1206 aatcgcccattgtagccataccatataggacaatgtctgctaagcagaatttccactgac 1265
|| |||||| ||| ||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct: 466 aaccgcccaccgtaattgtaccagataggacaatgtctgctaaacagaatttcaactgac 407
Query: 1266 ccaagagcccaacggagcacctgattaagacgatcagaaagattgataggtgcagaaccc 1325
|| |||||||| || ||||| ||||||||||| ||||| |||||||| || |||||||||
Sbjct: 406 ccgagagcccatcgcagcacttgattaagacggtcagacagattgattggcgcagaaccc 347
Query: 1326 ttgaaacaaggtcgtggtggcatgcagtagattgattgccagcctcttgcatgcatttta 1385
||||||||||| ||||||||||| |||||||||||| ||| |||||||| |||||||||
Sbjct: 346 ttgaaacaaggccgtggtggcatacagtagattgatatccaacctcttgcgtgcatttta 287
Query: 1386 aacccagtcagaatatcctctgtaactgaaccatagatccagccaatctcttttccccat 1445
|||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aacccagtaagaatatcttcagtaactgaaccatagatccagccaatctcttttccccat 227
Query: 1446 tcagttttgtcctcgtacccacagctgataacatggatagcttccttcagtagagaagct 1505
|| ||||||||||| || ||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 226 tcggttttgtcctcatatccacagctgatgacatggatggcttcctttagtagagaagct 167
Query: 1506 gggtttgttgaaggtggtatgccaccttgagtcataaaggtggatgcaatgaagattgga 1565
||||||||||||||||||||||| |||||||||||||||||||||||| | || || |||
Sbjct: 166 gggtttgttgaaggtggtatgcctccttgagtcataaaggtggatgcagtaaatatagga 107
Query: 1566 gactgaccaaagcgtttctccaatttcctctgggacataagcactgacctttcatcctca 1625
||||| ||||| |||||||||||| || ||||||||||||||| |||||||||||||||
Sbjct: 106 gactggccaaatcgtttctccaatctcttctgggacataagcatcgacctttcatcctca 47
Query: 1626 taaccttcaataccctcctcgatgtcttccatgtt 1660
|||||||| |||||||| || || |||||||||||
Sbjct: 46 taaccttctataccctcttctatatcttccatgtt 12
>gb|BF064711.2|BF064711 HV_CEb0017G02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017G02f, mRNA sequence
Length = 812
Score = 642 bits (324), Expect = 0.0
Identities = 619/716 (86%), Gaps = 1/716 (0%)
Strand = Plus / Minus
Query: 698 ctttccaaagagcgga-ccccaggattggtagccgctgttaatggcatacgaaattcctg 756
||||||||||||||| |||||||||| ||| |||||||| ||||| || || || ||||
Sbjct: 716 ctttccaaagagcggggccccaggatttgtaaccgctgttgatggcgtatgatatgcctg 657
Query: 757 ccaccattccgaccaggttaatgacaagaacagtggtcggagggatgagcaaactggtcc 816
||||||| || |||||||| || || || |||||||||||||||| | ||||||||
Sbjct: 656 ccaccatgcccaccaggttgatcacgaggcggttggtcggagggatgaggagactggtcc 597
Query: 817 acttgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactg 876
|||||||||| |||||||| ||||||||||| ||||| || |||||| |||||||| |
Sbjct: 596 acttgaacacgtatagctctgcaaagtcgccgtcctcgtcgtttgccttggaggtaaccg 537
Query: 877 tgaagttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaagagat 936
|||||||||| || |||||||||| ||| || ||||||||||||||||||||||| ||||
Sbjct: 536 tgaagttggtgtcgatcccagccagcaccttgagcagaccctggaacaccgcgaaaagat 477
Query: 937 gggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaa 996
||||||| ||||||||||| |||||||||||||| ||||||||||| || || ||||| |
Sbjct: 476 gggcagacgtgccaccaatgacccaaaactgctcgtttctccaccagtcctcgatgccga 417
Query: 997 caccactccatctgagctccaatataccagtggcgaaaatggaggcgaaaagaagaatga 1056
|||||||||||| ||||||||||||||||||||| |||||||| || || | ||||| |
Sbjct: 416 caccactccatcggagctccaatataccagtggcaaaaatggacgcaaacatgagaataa 357
Query: 1057 agaacattccagcataattactaatctcaggaatgataaatttattggtaagaagacaga 1116
||||||| |||||||||||||| ||||||||||||||||| || ||||| || || ||||
Sbjct: 356 agaacatcccagcataattactgatctcaggaatgataaacttgttggtgaggaggcaga 297
Query: 1117 tagcaggaagcacacaataggcgataagcggaacagatgtgattggataaacaatggtgt 1176
||||||| |||||||||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 296 tagcagggagcacacaataggcgataagtgggagggatgttattggataaacaatggtgt 237
Query: 1177 taatgtaagccagcctctccaaaagcttcaatcgcccattgtagccataccatataggac 1236
| |||||||||| |||||||| ||| ||||| |||||| ||| ||||| |||||||
Sbjct: 236 tgatgtaagccaccctctccagaagtttcaaccgcccaccgtaattgtaccagataggac 177
Query: 1237 aatgtctgctaagcagaatttccactgacccaagagcccaacggagcacctgattaagac 1296
|||||||||||| ||||||||| |||||||| |||||||| || ||||| ||||||||||
Sbjct: 176 aatgtctgctaaacagaatttcaactgacccgagagcccatcgcagcacttgattaagac 117
Query: 1297 gatcagaaagattgataggtgcagaacccttgaaacaaggtcgtggtggcatgcagtaga 1356
| ||||| |||||||| || |||||||||||||||||||| ||||||||||| ||||| |
Sbjct: 116 ggtcagacagattgattggcgcagaacccttgaaacaaggccgtggtggcatacagtaca 57
Query: 1357 ttgattgccagcctcttgcatgcattttaaacccagtcagaatatcctctgtaact 1412
|||| ||| |||||||| ||||||||||||||||| |||||||| || ||||||
Sbjct: 56 ctgatatccaacctcttgcgtgcattttaaacccagtaagaatatcttcagtaact 1
>gb|BI948889.1|BI948889 HVSMEl0011E15f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0011E15f, mRNA sequence
Length = 807
Score = 640 bits (323), Expect = 0.0
Identities = 540/611 (88%), Gaps = 1/611 (0%)
Strand = Plus / Minus
Query: 911 cagaccctggaacaccgcgaagagatgggcagaggtgccaccaataaccca-aaactgct 969
|||||||||||||| | || ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 611 cagaccctggaacattgataaaagatgggcagatgtgccaccaataacccagaaactgct 552
Query: 970 catttctccaccaatcttcaatgccaacaccactccatctgagctccaatataccagtgg 1029
| ||||||| ||| || || ||||| |||||||||||| |||||||||||||| ||||
Sbjct: 551 cgtttctcccccagtcctcgatgccgacaccactccatggcagctccaatatacccgtgg 492
Query: 1030 cgaaaatggaggcgaaaagaagaatgaagaacattccagcataattactaatctcaggaa 1089
| || |||||||| || | |||||| |||||||| |||||||| ||||| ||||| ||||
Sbjct: 491 caaagatggaggcaaacataagaataaagaacatcccagcatagttactgatctcgggaa 432
Query: 1090 tgataaatttattggtaagaagacagatagcaggaagcacacaataggcgataagcggaa 1149
|||||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 431 tgataaatttgttggtgaggagacagatagcaggaagcacacaataggcgataagtggaa 372
Query: 1150 cagatgtgattggataaacaatggtgttaatgtaagccagcctctccaaaagcttcaatc 1209
||||| |||||||||||||||||||| |||||||||| |||||||| ||| ||||| |
Sbjct: 371 gggatgttattggataaacaatggtgttgatgtaagccatcctctccagaagtttcaacc 312
Query: 1210 gcccattgtagccataccatataggacaatgtctgctaagcagaatttccactgacccaa 1269
||||| ||| ||||| ||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 311 gcccaccgtaattgtaccagataggacaatgtctgctaaacagaatttcaactgacccaa 252
Query: 1270 gagcccaacggagcacctgattaagacgatcagaaagattgataggtgcagaacccttga 1329
||||||| ||||| || ||||| ||||| ||||| |||||||| || |||||||||||||
Sbjct: 251 gagcccaccggagaacttgattgagacggtcagagagattgattggcgcagaacccttga 192
Query: 1330 aacaaggtcgtggtggcatgcagtagattgattgccagcctcttgcatgcattttaaacc 1389
|||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 191 aacaaggtcgtggtggcatgcagtagattgatatccaacctcttgcgtgcattttaaacc 132
Query: 1390 cagtcagaatatcctctgtaactgaaccatagatccagccaatctcttttccccattcag 1449
|||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 131 cagtaagaatatcttcagtaactgaaccatagatccagccaatctcttttccccattcgg 72
Query: 1450 ttttgtcctcgtacccacagctgataacatggatagcttccttcagtagagaagctgggt 1509
|||||||||| || ||||||||||| |||||||| |||||||| ||||| ||||||||||
Sbjct: 71 ttttgtcctcatatccacagctgatgacatggatggcttcctttagtagggaagctgggt 12
Query: 1510 ttgttgaaggt 1520
| |||||||||
Sbjct: 11 tcgttgaaggt 1
>gb|AV836384.1|AV836384 AV836384 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd20p06, mRNA sequence
Length = 473
Score = 636 bits (321), Expect = e-180
Identities = 427/461 (92%), Gaps = 1/461 (0%)
Strand = Plus / Minus
Query: 1714 tataactcttgttctttctcttccttctaccacagcagctcttaacaacaatgttaggtt 1773
|||| |||||||||||| |||| || | ||| ||||||||||||||||||||||||||||
Sbjct: 473 tatagctcttgttctttttctttctgccaccgcagcagctcttaacaacaatgttaggtt 414
Query: 1774 ccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcctattgaaacagc 1833
||| |||||| ||||| || ||||||||||| |||||||| |||||||| ||||||||||
Sbjct: 413 ccaaatcagcctcagttaatacaggatcatagccatacaaggcctgcctgttgaaacagc 354
Query: 1834 atcctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatcaa 1893
||||||| || ||||| | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 353 atcctgtcccgacatacattggaccctgaatgccatctaaacctttcatgttgatatcaa 294
Query: 1894 agaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctttgtg 1953
|||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 293 agaaaactatgttgcgattagcatatcgatcgtgcaaatcaatgccatcaaatctttgtg 234
Query: 1954 gaaattgtacataacaagttttccttcctagagctggatccatcatgaagcacattgctt 2013
||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 233 gaaattggacatagcaagtcttccttcctagagcgggatccatcatgaagcacattgctt 174
Query: 2014 ctctaagagctttgctgctattgaagtaatggtcacaatccacattgagaagataggcac 2073
|||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||
Sbjct: 173 ctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagataggcac 114
Query: 2074 catttgtcagcacagcagatacacgaatcagtgcattcattgcaccagccttcttgtgat 2133
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 113 catttgtcaacacagcagatacgcgaatcagtgcattcattgcaccagccttcttgtgat 54
Query: 2134 gctgaaagcctggtct-cttttcacgagagacatagacaag 2173
|||| || |||||||| |||||||||||||||||| |||||
Sbjct: 53 gctggaaacctggtctacttttcacgagagacatacacaag 13
>gb|CA030609.1|CA030609 HX07J05r HX Hordeum vulgare subsp. vulgare cDNA clone HX07J05
5-PRIME, mRNA sequence
Length = 617
Score = 628 bits (317), Expect = e-178
Identities = 528/597 (88%), Gaps = 1/597 (0%)
Strand = Plus / Minus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 606 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 547
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 546 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 487
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 486 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 427
Query: 726 tagccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaaga 785
|| |||||||| ||||| || || || ||||||||||| || |||||||| || || ||
Sbjct: 426 taaccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggttgatcacgagg 367
Query: 786 acagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcg 845
|| ||||||||||||||||| | |||||||||||||||||| |||||||| |||||||||
Sbjct: 366 acggtggtcggagggatgaggagactggtccacttgaacacgtatagctctgcaaagtcg 307
Query: 846 ccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacact 905
|| ||||| || |||||| |||||||| ||||||||||| || |||||||||| |||
Sbjct: 306 ccgtcctcgtcgtttgccttggaggtaaccgtgaagttggtgtcgatcccagccagcacc 247
Query: 906 ttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaac 965
|| ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 246 ttgagcagaccctggaacaccgcgaaaagatgggcagacgtgccaccaatgacccaaaac 187
Query: 966 tgctcatttctccaccaatcttcaatgccaacaccactccatctgagctccaatatacca 1025
||||| ||||||||||| || || ||||| ||||||||||||| ||||||||||||||||
Sbjct: 186 tgctcgtttctccaccagtcctcgatgccgacaccactccatcggagctccaatatacca 127
Query: 1026 gtggcgaaaatggaggcgaaaagaagaatgaagaacattccagcataattactaatctca 1085
||||| |||||||| || || | ||||| |||||||| |||||||||||||| ||||||
Sbjct: 126 gtggcaaaaatggacgcaaacatgagaataaagaacatcccagcataattactgatctca 67
Query: 1086 ggaatgataaatttattggtaagaagacagata-gcaggaagcacacaataggcgat 1141
||||||||||| || ||||| || || |||||| |||||||||||||||||||||||
Sbjct: 66 ggaatgataaacttgttggtgaggaggcagatangcaggaagcacacaataggcgat 10
>gb|CA030647.1|CA030647 HX07L05r HX Hordeum vulgare subsp. vulgare cDNA clone HX07L05
5-PRIME, mRNA sequence
Length = 638
Score = 628 bits (317), Expect = e-178
Identities = 528/597 (88%), Gaps = 1/597 (0%)
Strand = Plus / Minus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 606 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 547
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 546 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 487
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 486 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 427
Query: 726 tagccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaaga 785
|| |||||||| ||||| || || || ||||||||||| || |||||||| || || ||
Sbjct: 426 taaccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggttgatcacgagg 367
Query: 786 acagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcg 845
|| ||||||||||||||||| | |||||||||||||||||| |||||||| |||||||||
Sbjct: 366 acggtggtcggagggatgaggagactggtccacttgaacacgtatagctctgcaaagtcg 307
Query: 846 ccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacact 905
|| ||||| || |||||| |||||||| ||||||||||| || |||||||||| |||
Sbjct: 306 ccgtcctcgtcgtttgccttggaggtaaccgtgaagttggtgtcgatcccagccagcacc 247
Query: 906 ttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaac 965
|| ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 246 ttgagcagaccctggaacaccgcgaaaagatgggcagacgtgccaccaatgacccaaaac 187
Query: 966 tgctcatttctccaccaatcttcaatgccaacaccactccatctgagctccaatatacca 1025
||||| ||||||||||| || || ||||| ||||||||||||| ||||||||||||||||
Sbjct: 186 tgctcgtttctccaccagtcctcgatgccgacaccactccatcggagctccaatatacca 127
Query: 1026 gtggcgaaaatggaggcgaaaagaagaatgaagaacattccagcataattactaatctca 1085
||||| |||||||| || || | ||||| |||||||| |||||||||||||| ||||||
Sbjct: 126 gtggcaaaaatggacgcaaacatgagaataaagaacatcccagcataattactgatctca 67
Query: 1086 ggaatgataaatttattggtaagaagacagat-agcaggaagcacacaataggcgat 1141
||||||||||| || ||||| || || ||||| ||||||||||||||||||||||||
Sbjct: 66 ggaatgataaacttgttggtgaggaggcagataagcaggaagcacacaataggcgat 10
>gb|AL503512.1|AL503512 AL503512 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02G16T 5', mRNA sequence
Length = 700
Score = 618 bits (312), Expect = e-175
Identities = 516/584 (88%)
Strand = Plus / Minus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 598 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 539
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 538 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 479
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 478 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 419
Query: 726 tagccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaaga 785
|| |||||||| ||||| || || || ||||||||||| || |||||||| || || ||
Sbjct: 418 taaccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggttgatcacgagg 359
Query: 786 acagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcg 845
|| ||||||||||||||||| | |||||||||||||||||| |||||||| |||||||||
Sbjct: 358 acggtggtcggagggatgaggagactggtccacttgaacacgtatagctctgcaaagtcg 299
Query: 846 ccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacact 905
|| ||||| || |||||| |||||||| ||||||||||| || |||||||||| |||
Sbjct: 298 ccgtcctcgtcgtttgccttggaggtaaccgtgaagttggtgtcgatcccagccagcacc 239
Query: 906 ttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaac 965
|| ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 238 ttgagcagaccctggaacaccgcgaaaagatgggcagacgtgccaccaatgacccaaaac 179
Query: 966 tgctcatttctccaccaatcttcaatgccaacaccactccatctgagctccaatatacca 1025
||||| ||||||||||| || || ||||| ||||||||||||| ||||||||||||||||
Sbjct: 178 tgctcgtttctccaccagtcctcgatgccgacaccactccatcggagctccaatatacca 119
Query: 1026 gtggcgaaaatggaggcgaaaagaagaatgaagaacattccagcataattactaatctca 1085
||||| |||||||| || || | ||||| |||||||| |||||||||||||| ||||||
Sbjct: 118 gtggcaaaaatggacgcaaacatgagaataaagaacatcccagcataattactgatctca 59
Query: 1086 ggaatgataaatttattggtaagaagacagatagcaggaagcac 1129
||||||||||| || ||||| || || |||||||||||||||||
Sbjct: 58 ggaatgataaacttgttggtgaggaggcagatagcaggaagcac 15
>gb|BQ463453.1|BQ463453 HI05F03r HI Hordeum vulgare subsp. vulgare cDNA clone HI05F03
5-PRIME, mRNA sequence
Length = 523
Score = 601 bits (303), Expect = e-170
Identities = 468/523 (89%)
Strand = Plus / Minus
Query: 1252 gaatttccactgacccaagagcccaacggagcacctgattaagacgatcagaaagattga 1311
||||||| |||||||| |||||||| || ||||| ||||||||||| ||||| |||||||
Sbjct: 523 gaatttcaactgacccgagagcccatcgcagcacttgattaagacggtcagacagattga 464
Query: 1312 taggtgcagaacccttgaaacaaggtcgtggtggcatgcagtagattgattgccagcctc 1371
| || |||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||
Sbjct: 463 ttggcgcagaacccttgaaacaaggccgtggtggcatacagtagattgatatccaacctc 404
Query: 1372 ttgcatgcattttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaa 1431
|||| ||||||||||||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 403 ttgcgtgcattttaaacccagtaagaatatcttcagtaactgaaccatagatccagccaa 344
Query: 1432 tctcttttccccattcagttttgtcctcgtacccacagctgataacatggatagcttcct 1491
|||||||||||||||| ||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 343 tctcttttccccattcggttttgtcctcatatccacagctgatgacatggatggcttcct 284
Query: 1492 tcagtagagaagctgggtttgttgaaggtggtatgccaccttgagtcataaaggtggatg 1551
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 283 ttagtagagaagctgggtttgttgaaggtggtatgcctccttgagtcataaaggtggatg 224
Query: 1552 caatgaagattggagactgaccaaagcgtttctccaatttcctctgggacataagcactg 1611
|| | || || |||||||| ||||| |||||||||||| || ||||||||||||||| |
Sbjct: 223 cagtaaatataggagactggccaaatcgtttctccaatctcttctgggacataagcatcg 164
Query: 1612 acctttcatcctcataaccttcaataccctcctcgatgtcttccatgttaaagatgggag 1671
|||||||||||||||||||||| |||||||| || || ||||||||||| ||||||||||
Sbjct: 163 acctttcatcctcataaccttctataccctcttctatatcttccatgttgaagatgggag 104
Query: 1672 ctgaagattctgttctcttcataatacggctttgactatccatataactcttgttctttc 1731
| ||||| || ||||||||||| || ||| ||| |||||||||| ||||||||||||
Sbjct: 103 cagaagactcagttctcttcatcatgcggtttttgttatccatatagctcttgttctttt 44
Query: 1732 tcttccttctaccacagcagctcttaacaacaatgttaggttc 1774
|||| || | ||| |||||||||||||||||||||||||||||
Sbjct: 43 tctttctgccaccgcagcagctcttaacaacaatgttaggttc 1
>gb|BM376392.2|BM376392 EBem05_SQ002_B14_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_B14 5', mRNA sequence
Length = 555
Score = 559 bits (282), Expect = e-157
Identities = 486/554 (87%)
Strand = Plus / Minus
Query: 723 tggtagccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgaca 782
||||| |||||||| |||||||| || || ||||||||||| || ||||||||||| |||
Sbjct: 555 tggtaaccgctgttgatggcatatgatatgcctgccaccatgcccaccaggttaatcaca 496
Query: 783 agaacagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaag 842
|| || ||||||||||| ||||| | |||||||||||||||||| |||| |||||||||
Sbjct: 495 aggacggtggtcggaggaatgaggagactggtccacttgaacacgtataactcagcaaaa 436
Query: 843 tcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaac 902
||||||||||| || |||||| |||||||| ||||||||||| |||||||| ||||||
Sbjct: 435 tcgccatcctcgtcgtttgccttcgaggtaaccgtgaagttggtgtcaatcccggccaac 376
Query: 903 actttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataacccaa 962
|| |||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 375 accttcagcagaccctggaacactgcgaaaagatgggcagatgtgccaccaataacccag 316
Query: 963 aactgctcatttctccaccaatcttcaatgccaacaccactccatctgagctccaatata 1022
|||||||| ||||||||||| || || ||||| ||||||||||||| ||||||||||||
Sbjct: 315 aactgctcgtttctccaccagtcctcgatgccgacaccactccatcgcagctccaatata 256
Query: 1023 ccagtggcgaaaatggaggcgaaaagaagaatgaagaacattccagcataattactaatc 1082
|| ||||| || |||||||| || | |||||| |||||||| |||||||| ||||| |||
Sbjct: 255 cccgtggcaaagatggaggcaaacataagaataaagaacatcccagcatagttactgatc 196
Query: 1083 tcaggaatgataaatttattggtaagaagacagatagcaggaagcacacaataggcgata 1142
|| |||||||||||||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 195 tcgggaatgataaatttgttggtgaggagacagatagcaggaagcacacaataggcgata 136
Query: 1143 agcggaacagatgtgattggataaacaatggtgttaatgtaagccagcctctccaaaagc 1202
|| |||| ||||| |||||||||||||||||||| |||||||||| |||||||| |||
Sbjct: 135 agtggaagggatgttattggataaacaatggtgttgatgtaagccatcctctccagaagt 76
Query: 1203 ttcaatcgcccattgtagccataccatataggacaatgtctgctaagcagaatttccact 1262
||||| |||||| ||| ||||| ||||||||||||||||||| ||||||||| |||
Sbjct: 75 ttcaaccgcccaccgtaattgtaccagataggacaatgtctgctaaacagaatttcaact 16
Query: 1263 gacccaagagccca 1276
||||||||||||||
Sbjct: 15 gacccaagagccca 2
>gb|BF258638.2|BF258638 HVSMEf0016E13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0016E13f, mRNA sequence
Length = 578
Score = 555 bits (280), Expect = e-156
Identities = 503/576 (87%), Gaps = 1/576 (0%)
Strand = Plus / Minus
Query: 674 gatcacccagatcgagaagaacagctttccaaaga-gcggaccccaggattggtagccgc 732
||||||| |||| |||||||| |||||||| |||| | |||||||| || ||||| ||||
Sbjct: 577 gatcaccgagattgagaagaagagctttccgaagaagtggaccccaagactggtaaccgc 518
Query: 733 tgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaagaacagtgg 792
|||| |||||||| || || ||||||||||| || ||||||||||| ||||| || ||||
Sbjct: 517 tgttgatggcatatgatatgcctgccaccatgcccaccaggttaatcacaaggacggtgg 458
Query: 793 tcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcct 852
||||||| ||||| | |||||||||||||||||| |||| ||||||||| ||||||||||
Sbjct: 457 tcggaggaatgaggagactggtccacttgaacacgtataactcagcaaaatcgccatcct 398
Query: 853 catcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagca 912
| || |||||| |||||||| ||||||||||| |||||||| |||||||| |||||||
Sbjct: 397 cgtcgtttgccttcgaggtaaccgtgaagttggtgtcaatcccggccaacaccttcagca 338
Query: 913 gaccctggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcat 972
||||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 337 gaccctggaacactgcgaaaagatgggcagatgtgccaccaataacccagaactgctcgt 278
Query: 973 ttctccaccaatcttcaatgccaacaccactccatctgagctccaatataccagtggcga 1032
|||||||||| || || ||||| ||||||||||||| |||||||||||||| ||||| |
Sbjct: 277 ttctccaccagtcctcgatgccgacaccactccatcgcagctccaatatacccgtggcaa 218
Query: 1033 aaatggaggcgaaaagaagaatgaagaacattccagcataattactaatctcaggaatga 1092
| ||||||||||| | |||||| |||||||| |||||||| ||||| ||||| |||||||
Sbjct: 217 agatggaggcgaacataagaataaagaacatcccagcatagttactgatctcgggaatga 158
Query: 1093 taaatttattggtaagaagacagatagcaggaagcacacaataggcgataagcggaacag 1152
||||||| ||||| || ||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 157 taaatttgttggtgaggagacagatagcaggaagcacacaataggcgataagtggaaggg 98
Query: 1153 atgtgattggataaacaatggtgttaatgtaagccagcctctccaaaagcttcaatcgcc 1212
|||| |||||||||||||||||||| |||||||||| |||||||| ||| ||||| ||||
Sbjct: 97 atgttattggataaacaatggtgttgatgtaagccatcctctccagaagtttcaaccgcc 38
Query: 1213 cattgtagccataccatataggacaatgtctgctaa 1248
|| ||| ||||| |||||||||||||||||||
Sbjct: 37 caccgtaattgtaccagataggacaatgtctgctaa 2
>gb|AL505797.1|AL505797 AL505797 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09I21V 5', mRNA sequence
Length = 499
Score = 547 bits (276), Expect = e-154
Identities = 415/460 (90%), Gaps = 1/460 (0%)
Strand = Plus / Minus
Query: 1235 acaatgtctgctaagca-gaatttccactgacccaagagcccaacggagcacctgattaa 1293
|||||||||||||| || ||||||| |||||||| |||||||| || ||||| |||||||
Sbjct: 499 acaatgtctgctaaacaagaatttcaactgacccgagagcccatcgcagcacttgattaa 440
Query: 1294 gacgatcagaaagattgataggtgcagaacccttgaaacaaggtcgtggtggcatgcagt 1353
|||| ||||| |||||||| || |||||||||||||||||||| ||||||||||| ||||
Sbjct: 439 gacggtcagacagattgattggcgcagaacccttgaaacaaggccgtggtggcatacagt 380
Query: 1354 agattgattgccagcctcttgcatgcattttaaacccagtcagaatatcctctgtaactg 1413
|||||||| ||| |||||||| ||||||||||||||||| |||||||| || |||||||
Sbjct: 379 agattgatatccaacctcttgcgtgcattttaaacccagtaagaatatcttcagtaactg 320
Query: 1414 aaccatagatccagccaatctcttttccccattcagttttgtcctcgtacccacagctga 1473
|||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 319 aaccatagatccagccaatctcttttccccattcggttttgtcctcatatccacagctga 260
Query: 1474 taacatggatagcttccttcagtagagaagctgggtttgttgaaggtggtatgccacctt 1533
| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 259 tgacatggatggcttcctttagtagagaagctgggtttgttgaaggtggtatgcctcctt 200
Query: 1534 gagtcataaaggtggatgcaatgaagattggagactgaccaaagcgtttctccaatttcc 1593
|||||||||||||||||||| | || || |||||||| ||||| |||||||||||| ||
Sbjct: 199 gagtcataaaggtggatgcagtaaatataggagactggccaaatcgtttctccaatctct 140
Query: 1594 tctgggacataagcactgacctttcatcctcataaccttcaataccctcctcgatgtctt 1653
||||||||||||||| ||||||||||||||||||||||| |||||||| || || ||||
Sbjct: 139 tctgggacataagcatcgacctttcatcctcataaccttctataccctcttctatatctt 80
Query: 1654 ccatgttaaagatgggagctgaagattctgttctcttcat 1693
||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 79 ccatgttgaagatgggagcagaagactcagttctcttcat 40
>gb|BU985115.1|BU985115 HF06C19r HF Hordeum vulgare subsp. vulgare cDNA clone HF06C19
5-PRIME, mRNA sequence
Length = 548
Score = 513 bits (259), Expect = e-143
Identities = 457/523 (87%)
Strand = Plus / Minus
Query: 753 cctgccaccattccgaccaggttaatgacaagaacagtggtcggagggatgagcaaactg 812
||||||||||| || |||||||| || || || || ||||||||||||||||| | ||||
Sbjct: 532 cctgccaccatgcccaccaggttgatcacgaggacggtggtcggagggatgaggagactg 473
Query: 813 gtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggta 872
|||||||||||||| |||||||| ||||||||||| ||||| || |||||| ||||||
Sbjct: 472 gtccacttgaacacgtatagctctgcaaagtcgccgtcctcgtcgtttgccttggaggta 413
Query: 873 actgtgaagttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaag 932
|| ||||||||||| || |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 412 accgtgaagttggtgtcgatcccagccagcaccttgagcagaccctggaacaccgcgaaa 353
Query: 933 agatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatg 992
||||||||||| ||||||||||| |||||||||||||| ||||||||||| || || |||
Sbjct: 352 agatgggcagacgtgccaccaatgacccaaaactgctcgtttctccaccagtcctcgatg 293
Query: 993 ccaacaccactccatctgagctccaatataccagtggcgaaaatggaggcgaaaagaaga 1052
|| ||||||||||||| ||||||||||||||||||||| |||||||| || || | |||
Sbjct: 292 ccgacaccactccatcggagctccaatataccagtggcaaaaatggacgcaaacatgaga 233
Query: 1053 atgaagaacattccagcataattactaatctcaggaatgataaatttattggtaagaaga 1112
|| |||||||| |||||||||||||| ||||||||||||||||| || ||||| || ||
Sbjct: 232 ataaagaacatcccagcataattactgatctcaggaatgataaacttgttggtgaggagg 173
Query: 1113 cagatagcaggaagcacacaataggcgataagcggaacagatgtgattggataaacaatg 1172
|||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||
Sbjct: 172 cagatagcaggaagcacacaataggcgataagtgggagggatgttattggataaacaatg 113
Query: 1173 gtgttaatgtaagccagcctctccaaaagcttcaatcgcccattgtagccataccatata 1232
||||| |||||||||| |||||||| ||| ||||| |||||| ||| ||||| |||
Sbjct: 112 gtgttgatgtaagccaccctctccagaagtttcaaccgcccaccgtaattgtaccagata 53
Query: 1233 ggacaatgtctgctaagcagaatttccactgacccaagagccc 1275
|||||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 52 ggacaatgtctgctaaacagaatttcaactgacccgagagccc 10
>gb|BE214667.2|BE214667 HV_CEb0004C10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0004C10f, mRNA sequence
Length = 636
Score = 507 bits (256), Expect = e-142
Identities = 471/541 (87%), Gaps = 2/541 (0%)
Strand = Plus / Minus
Query: 1050 agaatgaagaacattccagcataattactaatctcaggaatgataaatttattggtaaga 1109
||||| |||||||| ||||||||||| | ||||||||||||||| || | | | ||
Sbjct: 563 agaataaagaacatcccagcataattcttgttctcaggaatgataacttggtggttgagn 504
Query: 1110 agacagatagcaggaagcacacaataggcgataagcggaacagatgtgattggataaaca 1169
|| ||||||||||| |||||||||||||||||| | ||| ||||| ||||| ||||
Sbjct: 503 aggcagatagcagggagcacacaataggcgata-gtggannggatgttattgggataaca 445
Query: 1170 atgg-tgttaatgtaagccagcctctccaaaagcttcaatcgcccattgtagccatacca 1228
|||| |||| |||||||||| |||||||| ||| |||| |||||| ||| |||||
Sbjct: 444 atgggtgttgatgtaagccaccctctccagaagtttcacccgcccaccgtaattgtacca 385
Query: 1229 tataggacaatgtctgctaagcagaatttccactgacccaagagcccaacggagcacctg 1288
||||||||||||||||||| ||||||||| |||||||| |||||||| || ||||| ||
Sbjct: 384 gataggacaatgtctgctaaacagaatttcaactgacccgagagcccatcgcagcacttg 325
Query: 1289 attaagacgatcagaaagattgataggtgcagaacccttgaaacaaggtcgtggtggcat 1348
||||||||| ||||| |||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 324 attaagacggtcagacagattgattggcgcagaacccttgaaacaaggccgtggtggcat 265
Query: 1349 gcagtagattgattgccagcctcttgcatgcattttaaacccagtcagaatatcctctgt 1408
|||||||||||| ||| |||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 264 acagtagattgatatccaacctcttgcgtgcattttaaacccagtaagaatatcttcagt 205
Query: 1409 aactgaaccatagatccagccaatctcttttccccattcagttttgtcctcgtacccaca 1468
||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 204 aactgaaccatagatccagccaatctcttttccccattcggttttgtcctcatatccaca 145
Query: 1469 gctgataacatggatagcttccttcagtagagaagctgggtttgttgaaggtggtatgcc 1528
|||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 144 gctgatgacatggatggcttcctttagtagagaagctgggtttgttgaaggtggtatgcc 85
Query: 1529 accttgagtcataaaggtggatgcaatgaagattggagactgaccaaagcgtttctccaa 1588
|||||||||||||||||||||||| | || || |||||||| ||||| |||||||||||
Sbjct: 84 tccttgagtcataaaggtggatgcagtaaatataggagactggccaaatcgtttctccaa 25
Query: 1589 t 1589
|
Sbjct: 24 t 24
>gb|BQ467842.1|BQ467842 HR01B16r HR Hordeum vulgare subsp. vulgare cDNA clone HR01B16
5-PRIME, mRNA sequence
Length = 498
Score = 482 bits (243), Expect = e-134
Identities = 426/487 (87%)
Strand = Plus / Minus
Query: 721 attggtagccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatga 780
||||||| |||||||| ||||| || || || ||||||||||| || |||||||| || |
Sbjct: 498 attggtaaccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggttgatca 439
Query: 781 caagaacagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaa 840
| || || ||||||||||||||||| | |||||||||||||||||| |||||||| ||||
Sbjct: 438 cgaggacggtggtcggagggatgaggagactggtccacttgaacacgtatagctctgcaa 379
Query: 841 agtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagcca 900
||||||| ||||| || |||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 378 agtcgccgtcctcgtcgtttgccttggaggtaaccgtgaagttggtgtcgatcccagcca 319
Query: 901 acactttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataaccc 960
||| || ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 318 gcaccttgagcagaccctggaacaccgcgaaaagatgggcagacgtgccaccaatgaccc 259
Query: 961 aaaactgctcatttctccaccaatcttcaatgccaacaccactccatctgagctccaata 1020
|||||||||| ||||||||||| || || ||||| ||||||||||||| |||||||||||
Sbjct: 258 aaaactgctcgtttctccaccagtcctcgatgccgacaccactccatcggagctccaata 199
Query: 1021 taccagtggcgaaaatggaggcgaaaagaagaatgaagaacattccagcataattactaa 1080
|||||||||| |||||||| || || | ||||| |||||||| |||||||||||||| |
Sbjct: 198 taccagtggcaaaaatggacgcaaacatgagaataaagaacatcccagcataattactga 139
Query: 1081 tctcaggaatgataaatttattggtaagaagacagatagcaggaagcacacaataggcga 1140
|||||||||||||||| || ||||| || || ||||||||||||||||||||||||||||
Sbjct: 138 tctcaggaatgataaacttgttggtgaggaggcagatagcaggaagcacacaataggcga 79
Query: 1141 taagcggaacagatgtgattggataaacaatggtgttaatgtaagccagcctctccaaaa 1200
|||| || | ||||| |||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 78 taagtgggagggatgttattggataaacaatggtgttgatgtaagccaccctctccagaa 19
Query: 1201 gcttcaa 1207
| |||||
Sbjct: 18 gtttcaa 12
>gb|BQ660756.1|BQ660756 HI05F03u HI Hordeum vulgare subsp. vulgare cDNA clone HI05F03
3-PRIME, mRNA sequence
Length = 539
Score = 371 bits (187), Expect = e-100
Identities = 313/355 (88%)
Strand = Plus / Plus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 175 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 234
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 235 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 294
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 295 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 354
Query: 726 tagccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaaga 785
|| |||||||| ||||| || || || ||||||||||| || |||||||| || || ||
Sbjct: 355 taaccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggttgatcacgagg 414
Query: 786 acagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcg 845
|| ||||||||||||||||| | |||||||||||||||||| |||||||| |||||||||
Sbjct: 415 acggtggtcggagggatgaggagactggtccacttgaacacgtatagctctgcaaagtcg 474
Query: 846 ccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagcca 900
|| ||||| || |||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 475 ccgtcctcgtcgtttgccttggaggtaaccgtgaagttggtgtcgatcccagcca 529
Score = 71.9 bits (36), Expect = 2e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 395 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 40 tcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactaggggggcagat 99
>gb|BU969975.1|BU969975 HB13D11r BC Hordeum vulgare subsp. vulgare cDNA clone HB13D11
5-PRIME, mRNA sequence
Length = 348
Score = 337 bits (170), Expect = 2e-090
Identities = 293/334 (87%)
Strand = Plus / Minus
Query: 1050 agaatgaagaacattccagcataattactaatctcaggaatgataaatttattggtaaga 1109
||||| |||||||| |||||||||||||| ||||||||||||||||| || ||||| ||
Sbjct: 344 agaataaagaacatcccagcataattactgatctcaggaatgataaacttgttggtgagg 285
Query: 1110 agacagatagcaggaagcacacaataggcgataagcggaacagatgtgattggataaaca 1169
|| |||||||||||||||||||||||||||||||| || | ||||| ||||||||||||
Sbjct: 284 aggcagatagcaggaagcacacaataggcgataagtgggagggatgttattggataaaca 225
Query: 1170 atggtgttaatgtaagccagcctctccaaaagcttcaatcgcccattgtagccataccat 1229
|||||||| |||||||||| |||||||| ||| ||||| |||||| ||| |||||
Sbjct: 224 atggtgttgatgtaagccaccctctccagaagtttcaaccgcccaccgtaattgtaccag 165
Query: 1230 ataggacaatgtctgctaagcagaatttccactgacccaagagcccaacggagcacctga 1289
||||||||||||||||||| ||||||||| |||||||| |||||||| || ||||| |||
Sbjct: 164 ataggacaatgtctgctaaacagaatttcaactgacccgagagcccatcgcagcacttga 105
Query: 1290 ttaagacgatcagaaagattgataggtgcagaacccttgaaacaaggtcgtggtggcatg 1349
|||||||| ||||| |||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 104 ttaagacggtcagacagattgattggcgcagaacccttgaaacaaggccgtggtggcata 45
Query: 1350 cagtagattgattgccagcctcttgcatgcattt 1383
|||||||||||| ||| |||||||| |||||||
Sbjct: 44 cagtagattgatatccaacctcttgcgtgcattt 11
>gb|CB875240.1|CB875240 HX07L05w HX Hordeum vulgare subsp. vulgare cDNA clone HX07L05
3-PRIME, mRNA sequence
Length = 654
Score = 333 bits (168), Expect = 3e-089
Identities = 267/300 (89%)
Strand = Plus / Plus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 355 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 414
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 415 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 474
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 475 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 534
Query: 726 tagccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaaga 785
|| |||||||| ||||| || || || ||||||||||| || |||||||| || || ||
Sbjct: 535 taaccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggttgatcacgagg 594
Query: 786 acagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcg 845
|| ||||||||||||||||| | |||||||||||||||||| |||||||| |||||||||
Sbjct: 595 acggtggtcggagggatgaggagactggtccacttgaacacgtatagctctgcaaagtcg 654
Score = 71.9 bits (36), Expect = 2e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 395 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 220 tcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactaggggggcagat 279
>gb|CB875201.1|CB875201 HX07J05w HX Hordeum vulgare subsp. vulgare cDNA clone HX07J05
3-PRIME, mRNA sequence
Length = 652
Score = 331 bits (167), Expect = 1e-088
Identities = 266/299 (88%)
Strand = Plus / Plus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 354 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 413
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 414 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 473
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 474 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 533
Query: 726 tagccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaaga 785
|| |||||||| ||||| || || || ||||||||||| || |||||||| || || ||
Sbjct: 534 taaccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggttgatcacgagg 593
Query: 786 acagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtc 844
|| ||||||||||||||||| | |||||||||||||||||| |||||||| ||||||||
Sbjct: 594 acggtggtcggagggatgaggagactggtccacttgaacacgtatagctctgcaaagtc 652
Score = 71.9 bits (36), Expect = 2e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 395 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 219 tcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactaggggggcagat 278
>gb|BQ469740.1|BQ469740 HZ01L16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01L16
5-PRIME, mRNA sequence
Length = 403
Score = 313 bits (158), Expect = 2e-083
Identities = 275/314 (87%)
Strand = Plus / Minus
Query: 492 gatcagcagttcacaccacattgccccaaggcggcagctttctgtgtcggggagatgaaa 551
||||||||||| || ||||| ||||||| |||| | |||||||| || ||| ||||||
Sbjct: 331 gatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatgaaa 272
Query: 552 ggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaaacgatg 611
|| ||||||||||||||||| | ||||||||| || || ||||||||||||||||| |||
Sbjct: 271 gggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatg 212
Query: 612 acgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtagagatga 671
||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 211 acgatggttggcgtgcggttctgcttccccatgagacccttgaggaaggggtagagatgg 152
Query: 672 aggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattggtagccg 731
|||||||||||||| |||||||| |||||||| ||||| |||||||| || ||||| |||
Sbjct: 151 aggatcacccagattgagaagaagagctttccgaagagtggaccccaagactggtaaccg 92
Query: 732 ctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaagaacagtg 791
||||| |||||||| || || ||||||||||| || ||||||||||| ||||| || |||
Sbjct: 91 ctgttgatggcatatgatatgcctgccaccatgcccaccaggttaatcacaaggacggtg 32
Query: 792 gtcggagggatgag 805
|||||||| |||||
Sbjct: 31 gtcggaggaatgag 18
Score = 77.8 bits (39), Expect = 2e-012
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 396 catctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
|||||||||||| ||| ||||||| | ||||||| ||||||||||||||||||||||||
Sbjct: 403 catctacaacaacaaaatcccatccaaccccctccggtatttacacgaggggggcagat 345
>gb|BE411751.1|BE411751 ISC008.H06F990806 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC008.H06, mRNA sequence
Length = 527
Score = 309 bits (156), Expect = 4e-082
Identities = 284/326 (87%), Gaps = 1/326 (0%)
Strand = Plus / Minus
Query: 549 aaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaaacg 608
||||| |||||||||||||| || | |||||||| || || |||||||| ||||||||
Sbjct: 329 aaagggtcgatcttcacccagaggagggagaagag-gaggcgaggaggatcgaccaaacn 271
Query: 609 atgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 668
||||| || || ||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 270 atgacnatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtagaga 211
Query: 669 tgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattggtag 728
|| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 210 tggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattggtaa 151
Query: 729 ccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaagaaca 788
|||||||| ||||| || || || ||||||||||| || |||||||| || || || ||
Sbjct: 150 ccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggttgatcacgaggacg 91
Query: 789 gtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcgcca 848
||||||||||||||||| | |||||||||||||||||| |||||||| |||||||||||
Sbjct: 90 gtggtcggagggatgaggagactggtccacttgaacacgtatagctctgcaaagtcgccg 31
Query: 849 tcctcatcagatgcctttgaggtaac 874
||||| || |||||| ||||||||
Sbjct: 30 tcctcgtcgtttgccttggaggtaac 5
>gb|BE411894.1|BE411894 ISC010.D05F990917 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC010.D05, mRNA sequence
Length = 448
Score = 307 bits (155), Expect = 1e-081
Identities = 285/327 (87%), Gaps = 2/327 (0%)
Strand = Plus / Minus
Query: 548 gaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaaac 607
|||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||||
Sbjct: 329 gaaagggtcgatcttcacccagaggagggagaagat-ga-gcgaggaggatcgaccaaac 272
Query: 608 gatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtagag 667
||||||||| || ||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 271 gatgacgatggtcggcgtgcggttntgcttccccatgagacccttgaggaaggggtagag 212
Query: 668 atgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattggta 727
||| |||||||||||||| ||||||| | ||| |||||||||||| ||||||||||||||
Sbjct: 211 atggaggatcacccagattgagaagancngctntccaaagagcgggccccaggattggta 152
Query: 728 gccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaagaac 787
|||||||| ||||| || || || ||||||||||| || |||||||| || || || ||
Sbjct: 151 accgctgttgatggcgtatgatatgcctgccaccatgcccaccaggttgatcacgaggac 92
Query: 788 agtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcgcc 847
||||||||||||||||| | |||||||||||||||||| |||||||| |||||||||||
Sbjct: 91 ggtggtcggagggatgaggagactggtccacttgaacacgtatagctctgcaaagtcgcc 32
Query: 848 atcctcatcagatgcctttgaggtaac 874
||||| || |||||| ||||||||
Sbjct: 31 gtcctcgtcgtttgccttggaggtaac 5
>gb|BJ460872.1|BJ460872 BJ460872 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42j03 3', mRNA sequence
Length = 590
Score = 285 bits (144), Expect = 5e-075
Identities = 231/260 (88%)
Strand = Plus / Plus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 328 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 387
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 388 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 447
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 448 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 507
Query: 726 tagccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaaga 785
|| |||||||| ||||| || || || ||||||||||| || |||||||| || || ||
Sbjct: 508 taaccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggttgatcacgagg 567
Query: 786 acagtggtcggagggatgag 805
|| |||||||||||||||||
Sbjct: 568 acggtggtcggagggatgag 587
Score = 71.9 bits (36), Expect = 2e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 395 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 193 tcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactaggggggcagat 252
>gb|BJ468308.1|BJ468308 BJ468308 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38c07 3', mRNA sequence
Length = 611
Score = 272 bits (137), Expect = 8e-071
Identities = 231/261 (88%), Gaps = 1/261 (0%)
Strand = Plus / Plus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 347 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 406
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 407 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 466
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 467 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 526
Query: 726 t-agccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaag 784
| | |||||||| ||||| || || || ||||||||||| || |||||||| || || ||
Sbjct: 527 taacccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggttgatcacgag 586
Query: 785 aacagtggtcggagggatgag 805
|| |||||||||||||||||
Sbjct: 587 gacggtggtcggagggatgag 607
Score = 71.9 bits (36), Expect = 2e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 395 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 212 tcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactaggggggcagat 271
>gb|BG368285.2|BG368285 HVSMEi0017H01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0017H01f, mRNA sequence
Length = 755
Score = 266 bits (134), Expect = 5e-069
Identities = 206/230 (89%)
Strand = Plus / Minus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 242 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 183
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 182 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 123
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 122 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 63
Query: 726 tagccgctgttaatggcatacgaaattcctgccaccattccgaccaggtt 775
|| |||||||| ||||| || || || ||||||||||| || ||||||||
Sbjct: 62 taaccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggtt 13
Score = 67.9 bits (34), Expect = 2e-009
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 397 atctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 375 atctacaaccaaaaaatcccgtctaaccccctccggtatttacactaggggggcagat 318
>gb|AV929091.1|AV929091 AV929091 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd20p06 3', mRNA sequence
Length = 509
Score = 266 bits (134), Expect = 5e-069
Identities = 206/230 (89%)
Strand = Plus / Plus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 273 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 332
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 333 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 392
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 393 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 452
Query: 726 tagccgctgttaatggcatacgaaattcctgccaccattccgaccaggtt 775
|| |||||||| ||||| || || || ||||||||||| || ||||||||
Sbjct: 453 taaccgctgttgatggcgtatgatatgcctgccaccatgcccaccaggtt 502
Score = 71.9 bits (36), Expect = 2e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 395 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 138 tcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactaggggggcagat 197
>gb|BJ447699.1|BJ447699 BJ447699 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16p07 5', mRNA sequence
Length = 577
Score = 252 bits (127), Expect = 8e-065
Identities = 193/215 (89%)
Strand = Plus / Minus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 215 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 156
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 155 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 96
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 95 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 36
Query: 726 tagccgctgttaatggcatacgaaattcctgccac 760
|| |||||||| ||||| || || || ||||||||
Sbjct: 35 taaccgctgttgatggcgtatgatatgcctgccac 1
Score = 71.9 bits (36), Expect = 2e-010
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 395 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 350 tcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactaggggggcagat 291
>gb|BJ455449.1|BJ455449 BJ455449 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16p07 3', mRNA sequence
Length = 528
Score = 252 bits (127), Expect = 8e-065
Identities = 193/215 (89%)
Strand = Plus / Plus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 314 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 373
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 374 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 433
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattgg 725
||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 434 agatggaggatcacccagattgagaagaagagctttccaaagagcgggccccaggattgg 493
Query: 726 tagccgctgttaatggcatacgaaattcctgccac 760
|| |||||||| ||||| || || || ||||||||
Sbjct: 494 taaccgctgttgatggcgtatgatatgcctgccac 528
Score = 71.9 bits (36), Expect = 2e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 395 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 179 tcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactaggggggcagat 238
>gb|AL503049.1|AL503049 AL503049 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09I21u 3', mRNA sequence
Length = 644
Score = 216 bits (109), Expect = 4e-054
Identities = 164/181 (90%), Gaps = 1/181 (0%)
Strand = Plus / Plus
Query: 546 atgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaa 605
|||||||| |||||||||||||| || | ||||||||| || || |||||||| ||||||
Sbjct: 384 atgaaagggtcgatcttcacccagaggagggagaagatggaggcgaggaggatcgaccaa 443
Query: 606 acgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtag 665
||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 444 acgatgacgatggtcggcgtgcggttctgcttccccatgagacccttgaggaaggggtag 503
Query: 666 agatgaaggatcacccagatcgagaagaacagctttccaaagagc-ggaccccaggattg 724
||||| |||||||||||||| |||||||| ||||||||||||||| || |||||||||||
Sbjct: 504 agatggaggatcacccagattgagaagaagagctttccaaagagcggggccccaggattg 563
Query: 725 g 725
|
Sbjct: 564 g 564
Score = 71.9 bits (36), Expect = 2e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 395 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 249 tcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactaggggggcagat 308
>gb|BQ464910.1|BQ464910 HU02B19r HU Hordeum vulgare subsp. vulgare cDNA clone HU02B19
5-PRIME, mRNA sequence
Length = 496
Score = 210 bits (106), Expect = 3e-052
Identities = 172/194 (88%)
Strand = Plus / Minus
Query: 492 gatcagcagttcacaccacattgccccaaggcggcagctttctgtgtcggggagatgaaa 551
||||||||||| || ||||| ||||||| |||| | |||||||| || ||| ||||||
Sbjct: 208 gatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatgaaa 149
Query: 552 ggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggaccaaacgatg 611
|| ||||||||||||||||| | ||||||||| || || ||||||||||||||||| |||
Sbjct: 148 gggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatg 89
Query: 612 acgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtagagatga 671
||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 88 acgatggttggcgtgcggttctgcttccccatgagacccttgaggaaggggtagagatgg 29
Query: 672 aggatcacccagat 685
||||||||||||||
Sbjct: 28 aggatcacccagat 15
Score = 79.8 bits (40), Expect = 6e-013
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 395 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggggcagat 454
||||||||||||| ||| ||||||| | ||||||| ||||||||||||||||||||||||
Sbjct: 281 tcatctacaacaacaaaatcccatccaaccccctccggtatttacacgaggggggcagat 222
>gb|BE216853.1|BE216853 HV_CEb0011N06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011N06f, mRNA sequence
Length = 906
Score = 192 bits (97), Expect = 6e-047
Identities = 202/237 (85%)
Strand = Plus / Minus
Query: 3486 tccttgcgctcgtactcatagcaagggcggcagacagggaaggcacactcattgcaggca 3545
||||||||||||||||| ||||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 436 tccttgcgctcgtactcgtagcaagggcggcagactgggaaggtgcactcgttgcaggca 377
Query: 3546 acaaagacatcaccagtggctgaaacgccaacagtgtcgccacaaatctggcagacctgc 3605
|||||||||||||||||||| ||||||||||| || || ||||| ||||||||| ||||
Sbjct: 376 acaaagacatcaccagtggccgaaacgccaacggtatcaccacatatctggcaggcctga 317
Query: 3606 ccattcgcactcttcgtgggcttagccgggacaggcgcgtcgccgtcgtggcggatcatg 3665
||| ||| | ||| |||| ||||| | |||||||||||||||| ||||||||||
Sbjct: 316 ccacccgcgcctttcacctccttacccggggcgggcgcgtcgccgtcgttgcggatcatg 257
Query: 3666 acgaactcgttgcggttgtgagagcctgccaccatccccttgttggccgccatctcc 3722
|||||||||||||| ||||| || || || ||||||||| ||||| |||||||||
Sbjct: 256 acgaactcgttgcgtttgtgcgacccggcgaccatcccccggttggtggccatctcc 200
>gb|AV836573.1|AV836573 AV836573 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd25p02, mRNA sequence
Length = 349
Score = 190 bits (96), Expect = 2e-046
Identities = 208/243 (85%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 1263 gacccaagagcccaacggagcacctgattaagacgatcagaaagattgataggtgcagaa 1322
|||||||||||||| || || ||||| ||||||||||| |||||||||| ||| ||||||
Sbjct: 270 gacccaagagcccaccgaagaacctggttaagacgatctgaaagattgagaggcgcagaa 211
Query: 1323 cccttgaaacaaggtcgtggtggcatgcagtagattgattgccagcctcttgca-tgcat 1381
|||||||| ||| ||| || |||||||| |||||| ||||||| | ||| |||||
Sbjct: 210 cccttgaatgcaggccgtttaggaatgcagtaaattgatcgccagcca-tggcaatgcat 152
Query: 1382 tttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatctcttttcc 1441
||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 151 cttaaacccagttaggatatcctctgtaactgacccatagatccagccaatctcttttcc 92
Query: 1442 ccattcagttttgtcctcgtacccacagctgataacatggatagcttccttcagtagaga 1501
||| || || ||||| || || ||||| | ||| |||||||||||||||||||| |||||
Sbjct: 91 ccagtctgtcttgtcttcatagccacanccgatgacatggatagcttccttcagaagaga 32
Query: 1502 agc 1504
|||
Sbjct: 31 agc 29
>gb|AV914933.1|AV914933 AV914933 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9b06 5', mRNA sequence
Length = 654
Score = 190 bits (96), Expect = 2e-046
Identities = 359/444 (80%), Gaps = 2/444 (0%)
Strand = Plus / Minus
Query: 564 acccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggc 623
|||||||| ||||||||||| || || ||||||| | ||| |||||||| || || ||
Sbjct: 615 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 556
Query: 624 gtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccag 683
|||||||| ||||||||||| |||||||||||||||||||| | |||| |||||||||
Sbjct: 555 gtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaatcacccag 496
Query: 684 atcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggca 743
| | ||||| ||||| || |||||||| ||||| |||||||| || ||||| |||||
Sbjct: 495 aaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatggcg 436
Query: 744 tacgaaattcctgccaccattccgaccaggttaatga-caagaacagtggtcggagggat 802
|| || | || || || | ||||||| |||||||| ||||| || |||||||||||
Sbjct: 435 taggaggtaccagcaacgacaccgaccatgttaatgatcaagatg-gtcgtcggagggat 377
Query: 803 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 862
||| | | ||||||||||||| || ||||||||||||||||| || || ||| ||
Sbjct: 376 gagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcattagc 317
Query: 863 ctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaa 922
||||||||| || ||||||||||| || || || || | ||| ||||| |||||||| ||
Sbjct: 316 ctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctgaaa 257
Query: 923 caccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccacca 982
|| || || |||||||||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 256 gacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccacca 197
Query: 983 atcttcaatgccaacaccactcca 1006
|| ||||||||||||||||||||
Sbjct: 196 ctcgtcaatgccaacaccactcca 173
>gb|AV925215.1|AV925215 AV925215 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd22e04 5', mRNA sequence
Length = 656
Score = 190 bits (96), Expect = 2e-046
Identities = 359/444 (80%), Gaps = 2/444 (0%)
Strand = Plus / Minus
Query: 564 acccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggc 623
|||||||| ||||||||||| || || ||||||| | ||| |||||||| || || ||
Sbjct: 622 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 563
Query: 624 gtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccag 683
|||||||| ||||||||||| |||||||||||||||||||| | |||| |||||||||
Sbjct: 562 gtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaatcacccag 503
Query: 684 atcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggca 743
| | ||||| ||||| || |||||||| ||||| |||||||| || ||||| |||||
Sbjct: 502 aaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatggcg 443
Query: 744 tacgaaattcctgccaccattccgaccaggttaatga-caagaacagtggtcggagggat 802
|| || | || || || | ||||||| |||||||| ||||| || |||||||||||
Sbjct: 442 taggaggtaccagcaacgacaccgaccatgttaatgatcaagatg-gtcgtcggagggat 384
Query: 803 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 862
||| | | ||||||||||||| || ||||||||||||||||| || || ||| ||
Sbjct: 383 gagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcattagc 324
Query: 863 ctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaa 922
||||||||| || ||||||||||| || || || || | ||| ||||| |||||||| ||
Sbjct: 323 ctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctgaaa 264
Query: 923 caccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccacca 982
|| || || |||||||||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 263 gacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccacca 204
Query: 983 atcttcaatgccaacaccactcca 1006
|| ||||||||||||||||||||
Sbjct: 203 ctcgtcaatgccaacaccactcca 180
>gb|BM816139.1|BM816139 HC105G09_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC105G09_T3.ab1 similar to (AF200528) cellulose
synthase-4 [Zea mays],(AF200529) cellulose synthase-5
[Zea mays],(AF200533) cellulose synthase-9 [Zea
mays],cellulose synthase catalytic subunit [Arabidopsis
thaliana],unnamed protein product [Arabidopsis
thaliana],, mRNA sequence
Length = 916
Score = 190 bits (96), Expect = 2e-046
Identities = 359/444 (80%), Gaps = 2/444 (0%)
Strand = Plus / Minus
Query: 564 acccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggc 623
|||||||| ||||||||||| || || ||||||| | ||| |||||||| || || ||
Sbjct: 575 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 516
Query: 624 gtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccag 683
|||||||| ||||||||||| |||||||||||||||||||| | |||| |||||||||
Sbjct: 515 gtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaatcacccag 456
Query: 684 atcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggca 743
| | ||||| ||||| || |||||||| ||||| |||||||| || ||||| |||||
Sbjct: 455 aaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatggcg 396
Query: 744 tacgaaattcctgccaccattccgaccaggttaatga-caagaacagtggtcggagggat 802
|| || | || || || | ||||||| |||||||| ||||| || |||||||||||
Sbjct: 395 taggaggtaccagcaacgacaccgaccatgttaatgatcaagatg-gtcgtcggagggat 337
Query: 803 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 862
||| | | ||||||||||||| || ||||||||||||||||| || || ||| ||
Sbjct: 336 gagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcattagc 277
Query: 863 ctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaa 922
||||||||| || ||||||||||| || || || || | ||| ||||| |||||||| ||
Sbjct: 276 ctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctgaaa 217
Query: 923 caccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccacca 982
|| || || |||||||||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 216 gacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccacca 157
Query: 983 atcttcaatgccaacaccactcca 1006
|| ||||||||||||||||||||
Sbjct: 156 ctcgtcaatgccaacaccactcca 133
>gb|BU990492.1|BU990492 HF25D10r HF Hordeum vulgare subsp. vulgare cDNA clone HF25D10
5-PRIME, mRNA sequence
Length = 621
Score = 190 bits (96), Expect = 2e-046
Identities = 359/444 (80%), Gaps = 2/444 (0%)
Strand = Plus / Minus
Query: 564 acccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggc 623
|||||||| ||||||||||| || || ||||||| | ||| |||||||| || || ||
Sbjct: 454 acccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggt 395
Query: 624 gtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccag 683
|||||||| ||||||||||| |||||||||||||||||||| | |||| |||||||||
Sbjct: 394 gtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaatcacccag 335
Query: 684 atcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggca 743
| | ||||| ||||| || |||||||| ||||| |||||||| || ||||| |||||
Sbjct: 334 aaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatggcg 275
Query: 744 tacgaaattcctgccaccattccgaccaggttaatga-caagaacagtggtcggagggat 802
|| || | || || || | ||||||| |||||||| ||||| || |||||||||||
Sbjct: 274 taggaggtaccagcaacgacaccgaccatgttaatgatcaagatg-gtcgtcggagggat 216
Query: 803 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 862
||| | | ||||||||||||| || ||||||||||||||||| || || ||| ||
Sbjct: 215 gagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcattagc 156
Query: 863 ctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaa 922
||||||||| || ||||||||||| || || || || | ||| ||||| |||||||| ||
Sbjct: 155 ctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctgaaa 96
Query: 923 caccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccacca 982
|| || || |||||||||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 95 gacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccacca 36
Query: 983 atcttcaatgccaacaccactcca 1006
|| ||||||||||||||||||||
Sbjct: 35 ctcgtcaatgccaacaccactcca 12
>gb|AL503528.1|AL503528 AL503528 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02H13T 5', mRNA sequence
Length = 700
Score = 188 bits (95), Expect = 9e-046
Identities = 208/243 (85%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 1263 gacccaagagcccaacggagcacctgattaagacgatcagaaagattgataggtgcagaa 1322
|||||||||||||| || || ||||| ||||||||||| |||||||||| ||| ||||||
Sbjct: 535 gacccaagagcccaccgaagaacctggttaagacgatctgaaagattgagaggcgcagaa 476
Query: 1323 cccttgaaacaaggtcgtggtggcatgcagtagattgattgccagcctcttgca-tgcat 1381
|||||||| ||| ||| || |||||||| |||||| ||||||| | ||| |||||
Sbjct: 475 cccttgaatgcaggccgtttaggaatgcagtaaattgatcgccagcca-tggcaatgcat 417
Query: 1382 tttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatctcttttcc 1441
||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 416 cttaaacccagttaggatatcctctgtaactgacccatagatccagccaatctcttttcc 357
Query: 1442 ccattcagttttgtcctcgtacccacagctgataacatggatagcttccttcagtagaga 1501
||| || || ||||| || || ||||| | ||| |||||||||||||||||||| |||||
Sbjct: 356 ccagtctgtcttgtcttcatagccacaaccgatgacatggatagcttccttcagaagaga 297
Query: 1502 agc 1504
|||
Sbjct: 296 agc 294
>gb|BF258768.2|BF258768 HVSMEf0016K01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0016K01f, mRNA sequence
Length = 588
Score = 188 bits (95), Expect = 9e-046
Identities = 208/243 (85%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 1263 gacccaagagcccaacggagcacctgattaagacgatcagaaagattgataggtgcagaa 1322
|||||||||||||| || || ||||| ||||||||||| |||||||||| ||| ||||||
Sbjct: 403 gacccaagagcccaccgaagaacctggttaagacgatctgaaagattgagaggcgcagaa 344
Query: 1323 cccttgaaacaaggtcgtggtggcatgcagtagattgattgccagcctcttgca-tgcat 1381
|||||||| ||| ||| || |||||||| |||||| ||||||| | ||| |||||
Sbjct: 343 cccttgaatgcaggccgtttaggaatgcagtaaattgatcgccagcca-tggcaatgcat 285
Query: 1382 tttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatctcttttcc 1441
||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 284 cttaaacccagttaggatatcctctgtaactgacccatagatccagccaatctcttttcc 225
Query: 1442 ccattcagttttgtcctcgtacccacagctgataacatggatagcttccttcagtagaga 1501
||| || || ||||| || || ||||| | ||| |||||||||||||||||||| |||||
Sbjct: 224 ccagtctgtcttgtcttcatagccacaaccgatgacatggatagcttccttcagaagaga 165
Query: 1502 agc 1504
|||
Sbjct: 164 agc 162
>gb|BI779535.2|BI779535 EBro01_SQ004_F12_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_F12 5', mRNA sequence
Length = 596
Score = 188 bits (95), Expect = 9e-046
Identities = 208/243 (85%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 1263 gacccaagagcccaacggagcacctgattaagacgatcagaaagattgataggtgcagaa 1322
|||||||||||||| || || ||||| ||||||||||| |||||||||| ||| ||||||
Sbjct: 349 gacccaagagcccaccgaagaacctggttaagacgatctgaaagattgagaggcgcagaa 290
Query: 1323 cccttgaaacaaggtcgtggtggcatgcagtagattgattgccagcctcttgca-tgcat 1381
|||||||| ||| ||| || |||||||| |||||| ||||||| | ||| |||||
Sbjct: 289 cccttgaatgcaggccgtttaggaatgcagtaaattgatcgccagcca-tggcaatgcat 231
Query: 1382 tttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatctcttttcc 1441
||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 230 cttaaacccagttaggatatcctctgtaactgacccatagatccagccaatctcttttcc 171
Query: 1442 ccattcagttttgtcctcgtacccacagctgataacatggatagcttccttcagtagaga 1501
||| || || ||||| || || ||||| | ||| |||||||||||||||||||| |||||
Sbjct: 170 ccagtctgtcttgtcttcatagccacaaccgatgacatggatagcttccttcagaagaga 111
Query: 1502 agc 1504
|||
Sbjct: 110 agc 108
>gb|CA031178.1|CA031178 HX09D18r HX Hordeum vulgare subsp. vulgare cDNA clone HX09D18
5-PRIME, mRNA sequence
Length = 654
Score = 188 bits (95), Expect = 9e-046
Identities = 208/243 (85%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 1263 gacccaagagcccaacggagcacctgattaagacgatcagaaagattgataggtgcagaa 1322
|||||||||||||| || || ||||| ||||||||||| |||||||||| ||| ||||||
Sbjct: 649 gacccaagagcccaccgaagaacctggttaagacgatctgaaagattgagaggcgcagaa 590
Query: 1323 cccttgaaacaaggtcgtggtggcatgcagtagattgattgccagcctcttgca-tgcat 1381
|||||||| ||| ||| || |||||||| |||||| ||||||| | ||| |||||
Sbjct: 589 cccttgaatgcaggccgtttaggaatgcagtaaattgatcgccagcca-tggcaatgcat 531
Query: 1382 tttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatctcttttcc 1441
||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 530 cttaaacccagttaggatatcctctgtaactgacccatagatccagccaatctcttttcc 471
Query: 1442 ccattcagttttgtcctcgtacccacagctgataacatggatagcttccttcagtagaga 1501
||| || || ||||| || || ||||| | ||| |||||||||||||||||||| |||||
Sbjct: 470 ccagtctgtcttgtcttcatagccacaaccgatgacatggatagcttccttcagaagaga 411
Query: 1502 agc 1504
|||
Sbjct: 410 agc 408
>gb|BM816138.1|BM816138 HC109B12_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B12_T3.ab1 similar to (AF200528) cellulose
synthase-4 [Zea mays],(AF200529) cellulose synthase-5
[Zea mays],(AF200533) cellulose synthase-9 [Zea
mays],cellulose synthase catalytic subunit [Arabidopsis
thaliana],unnamed protein product [Arabidopsis
thaliana],, mRNA sequence
Length = 880
Score = 182 bits (92), Expect = 6e-044
Identities = 357/443 (80%), Gaps = 2/443 (0%)
Strand = Plus / Minus
Query: 565 cccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggcg 624
||||||| ||||||||||| || || ||||||| | ||| |||||||| || || || |
Sbjct: 812 cccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtg 753
Query: 625 tgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccaga 684
||||||| ||| ||||||| |||||||||||||||||||| | |||| ||||||||||
Sbjct: 752 tgcggttttgcntgcccataagacccttgaggaaggggtataagtgaacaatcacccaga 693
Query: 685 tcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggcat 744
| ||||| ||||| || |||||||| ||||| |||||||| || ||||| ||||| |
Sbjct: 692 aggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatggcgt 633
Query: 745 acgaaattcctgccaccattccgaccaggttaatga-caagaacagtggtcggagggatg 803
| || | || || || | ||||||| |||||||| ||||| || ||||||||||||
Sbjct: 632 aggaggtaccagcaacgacaccgaccatgttaatgatcaagatg-gtcgtcggagggatg 574
Query: 804 agcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgcc 863
|| | | ||||||||||||| || ||||||||||||||||| || || ||| |||
Sbjct: 573 agaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcattagcc 514
Query: 864 tttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaac 923
|||||||| || ||||||||||| || || || || | ||| ||||| |||||||| ||
Sbjct: 513 tttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctgaaag 454
Query: 924 accgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaa 983
|| || || |||||||||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 453 acggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccaccac 394
Query: 984 tcttcaatgccaacaccactcca 1006
|| ||||||||||||||||||||
Sbjct: 393 tcgtcaatgccaacaccactcca 371
Score = 58.0 bits (29), Expect = 2e-006
Identities = 87/105 (82%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 1217 gtagccataccatataggacaatgtctgctaagcagaatttccactgacccaagagccca 1276
|||||||||||||| || ||||| | ||| | |||||||| || || |||||||||||
Sbjct: 160 gtagccataccataaggggcaatgccggctgaaaagaatttcaacggaaccaagagccca 101
Query: 1277 acggagcacctgattaagacgatcagaaagattgataggtgcaga 1321
||||||| ||| || |||||||| ||||||||||| || |||||
Sbjct: 100 ccggagca-ctggttcagacgatctgaaagattgatgggggcaga 57
>gb|BU989992.1|BU989992 HF23J07r HF Hordeum vulgare subsp. vulgare cDNA clone HF23J07
5-PRIME, mRNA sequence
Length = 480
Score = 182 bits (92), Expect = 6e-044
Identities = 236/284 (83%)
Strand = Plus / Minus
Query: 1218 tagccataccatataggacaatgtctgctaagcagaatttccactgacccaagagcccaa 1277
|||||||||||||| |||||||| || || | |||||||||||||| ||||| |||||
Sbjct: 371 tagccataccatatgggacaatgcctactgaaaagaatttccactgaaccaagcgcccac 312
Query: 1278 cggagcacctgattaagacgatcagaaagattgataggtgcagaacccttgaaacaaggt 1337
|| ||||| ||||| |||||||| ||||| |||||||| ||||| ||||||||| |||
Sbjct: 311 cgaagcacttgattcagacgatctgaaaggttgataggggcagagcccttgaaagctggt 252
Query: 1338 cgtggtggcatgcagtagattgattgccagcctcttgcatgcattttaaacccagtcaga 1397
|| ||||| ||||||||||| ||||||| | ||||||||| || |||||||| |||
Sbjct: 251 cgcttaggcatacagtagattgaccgccagccacgtgcatgcatcttgaacccagtaaga 192
Query: 1398 atatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcc 1457
||||| || ||||| ||||| ||||||||||||||||| ||||||| ||| || ||||
Sbjct: 191 atatcttccgtaacagaaccgtagatccagccaatctcccttccccaatcacttcggtcc 132
Query: 1458 tcgtacccacagctgataacatggatagcttccttcagtagaga 1501
|| || |||||||| || |||||||| ||||| ||||| |||||
Sbjct: 131 tcataaccacagctaatgacatggattgcttctttcagaagaga 88
>gb|AL505671.1|AL505671 AL505671 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09C19V 5', mRNA sequence
Length = 497
Score = 174 bits (88), Expect = 1e-041
Identities = 208/244 (85%), Gaps = 3/244 (1%)
Strand = Plus / Minus
Query: 1263 gacccaagagcccaacgga-gcacctgattaagacgatcagaaagattgataggtgcaga 1321
|||||||||||||| | || | ||||| ||||||||||| |||||||||| ||| |||||
Sbjct: 480 gacccaagagcccacccgaagaacctggttaagacgatctgaaagattgagaggcgcaga 421
Query: 1322 acccttgaaacaaggtcgtggtggcatgcagtagattgattgccagcctcttgca-tgca 1380
||||||||| ||| ||| || |||||||| |||||| ||||||| | ||| ||||
Sbjct: 420 acccttgaatgcaggccgtttaggaatgcagtaaattgatcgccagcca-tggcaatgca 362
Query: 1381 ttttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatctcttttc 1440
| ||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 361 tcttaaacccagttaggatatcctctgtaactgacccatagatccagccaatctcttttc 302
Query: 1441 cccattcagttttgtcctcgtacccacagctgataacatggatagcttccttcagtagag 1500
|||| || || ||||| || || ||||| | ||| |||||||||||||||||||| ||||
Sbjct: 301 cccagtctgtcttgtcttcatagccacaaccgatgacatggatagcttccttcagaagag 242
Query: 1501 aagc 1504
||||
Sbjct: 241 aagc 238
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 391,949
Number of Sequences: 312970
Number of extensions: 391949
Number of successful extensions: 108030
Number of sequences better than 0.5: 205
Number of HSP's better than 0.5 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107401
Number of HSP's gapped (non-prelim): 563
length of query: 3896
length of database: 175,134,539
effective HSP length: 20
effective length of query: 3876
effective length of database: 168,875,139
effective search space: 654560038764
effective search space used: 654560038764
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)