BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405245.2.3
(2175 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK125199.1|CK125199 BES1824107d13 BES1824 Hordeum vulgar... 1055 0.0
gb|AV915524.1|AV915524 AV915524 K. Sato unpublished cDNA li... 934 0.0
gb|CK122417.1|CK122417 BES1824103e24 BES1824 Hordeum vulgar... 926 0.0
gb|BM370842.2|BM370842 EBro04_SQ002_H20_R root, 3 week, sal... 896 0.0
gb|BF629636.2|BF629636 HVSMEb0012P16f Hordeum vulgare seedl... 886 0.0
gb|BM816402.1|BM816402 HC108C02_SK.ab1 HC Hordeum vulgare s... 880 0.0
gb|BQ462810.1|BQ462810 HI02B08r HI Hordeum vulgare subsp. v... 880 0.0
gb|AL507827.1|AL507827 AL507827 Hordeum vulgare Barke devel... 827 0.0
gb|AL503349.1|AL503349 AL503349 Hordeum vulgare Barke roots... 823 0.0
gb|BM816403.1|BM816403 HC108H05_SK.ab1 HC Hordeum vulgare s... 813 0.0
gb|BM816267.1|BM816267 HB105E10_SK.ab1 HB Hordeum vulgare s... 805 0.0
gb|CV063161.1|CV063161 BNEL87c6 Barley EST endosperm librar... 803 0.0
gb|BQ767763.1|BQ767763 EBro08_SQ009_D22_R root, 3 week, dro... 799 0.0
gb|BM816400.1|BM816400 HB01H04_T3.ab1 HB Hordeum vulgare su... 793 0.0
gb|BE422168.1|BE422168 HWM021cA.04r ITEC HWM Barley Leaf Li... 785 0.0
gb|BM816401.1|BM816401 HC107A12_SK.ab1 HC Hordeum vulgare s... 781 0.0
gb|BJ463720.1|BJ463720 BJ463720 K. Sato unpublished cDNA li... 777 0.0
gb|CA018721.1|CA018721 HV09H09r HV Hordeum vulgare subsp. v... 775 0.0
gb|BF260200.2|BF260200 HVSMEf0021F24f Hordeum vulgare seedl... 773 0.0
gb|BM816266.1|BM816266 HC01H12_T3.ab1 HC Hordeum vulgare su... 773 0.0
gb|BQ768396.1|BQ768396 EBro08_SQ011_H16_R root, 3 week, dro... 753 0.0
gb|BI958959.1|BI958959 HVSMEn0017G17f Hordeum vulgare rachi... 751 0.0
gb|BQ762919.1|BQ762919 EBro02_SQ006_D18_R root, 3 week, hyd... 745 0.0
gb|BM370810.2|BM370810 EBro04_SQ002_F16_R root, 3 week, sal... 741 0.0
gb|AV916910.1|AV916910 AV916910 K. Sato unpublished cDNA li... 729 0.0
gb|BI959762.1|BI959762 HVSMEn0021F08f Hordeum vulgare rachi... 728 0.0
gb|BJ464404.1|BJ464404 BJ464404 K. Sato unpublished cDNA li... 724 0.0
gb|BQ768330.1|BQ768330 EBro08_SQ011_L11_R root, 3 week, dro... 724 0.0
gb|BF616987.2|BF616987 HVSMEc0014C22f Hordeum vulgare seedl... 720 0.0
gb|BJ463791.1|BJ463791 BJ463791 K. Sato unpublished cDNA li... 710 0.0
gb|CB883423.1|CB883423 HQ02D09w HQ Hordeum vulgare subsp. v... 702 0.0
gb|CV062598.1|CV062598 BNEL80g9 Barley EST endosperm librar... 694 0.0
gb|BU981848.1|BU981848 HA24N01r HA Hordeum vulgare subsp. v... 692 0.0
gb|BF623132.1|BF623132 HVSMEa0014L04f Hordeum vulgare seedl... 684 0.0
gb|AL505083.1|AL505083 AL505083 Hordeum vulgare Barke roots... 682 0.0
gb|CA020731.1|CA020731 HZ37G18r HZ Hordeum vulgare subsp. v... 682 0.0
gb|BE421741.1|BE421741 HWM013cH.04r ITEC HWM Barley Leaf Li... 676 0.0
gb|BI959946.1|BI959946 HVSMEn0022I18f Hordeum vulgare rachi... 670 0.0
gb|BF623994.2|BF623994 HVSMEa0008H04f Hordeum vulgare seedl... 660 0.0
gb|AV912742.1|AV912742 AV912742 K. Sato unpublished cDNA li... 660 0.0
gb|AL506436.1|AL506436 AL506436 Hordeum vulgare Barke devel... 658 0.0
gb|AV925561.1|AV925561 AV925561 K. Sato unpublished cDNA li... 642 0.0
gb|BJ464194.1|BJ464194 BJ464194 K. Sato unpublished cDNA li... 638 0.0
gb|BQ466912.1|BQ466912 HS01P12T HS Hordeum vulgare subsp. v... 638 0.0
gb|BF065332.2|BF065332 HV_CEb0012C09f Hordeum vulgare seedl... 634 e-180
gb|BI959767.1|BI959767 HVSMEn0021F18f Hordeum vulgare rachi... 634 e-180
gb|CA025152.1|CA025152 HZ51F19r HZ Hordeum vulgare subsp. v... 622 e-176
gb|BQ768409.1|BQ768409 EBro08_SQ011_K14_R root, 3 week, dro... 618 e-175
gb|AL508879.1|AL508879 AL508879 Hordeum vulgare Barke devel... 617 e-175
gb|BF253761.2|BF253761 HVSMEf0002A22f Hordeum vulgare seedl... 617 e-175
gb|BM372331.2|BM372331 EBro03_SQ004_K16_R root, 3 week, wat... 609 e-172
gb|BE454727.2|BE454727 HVSMEh0095I10f Hordeum vulgare 5-45 ... 605 e-171
gb|CA016350.1|CA016350 HV09D04u HV Hordeum vulgare subsp. v... 599 e-169
gb|BQ135334.1|BQ135334 LP10054 Lemma/palea-enriched cDNA li... 585 e-165
gb|BI955359.1|BI955359 HVSMEm0022M03f Hordeum vulgare green... 583 e-165
gb|BI959824.1|BI959824 HVSMEn0021M21f Hordeum vulgare rachi... 569 e-160
gb|BU966679.1|BU966679 HB02A14r BC Hordeum vulgare subsp. v... 559 e-157
gb|BI957579.1|BI957579 HVSMEn0010D11f Hordeum vulgare rachi... 551 e-155
gb|CA017709.1|CA017709 HV05P24r HV Hordeum vulgare subsp. v... 551 e-155
gb|BQ467241.1|BQ467241 HS03C03r HS Hordeum vulgare subsp. v... 539 e-151
gb|BQ463301.1|BQ463301 HI04L11r HI Hordeum vulgare subsp. v... 537 e-151
gb|BJ467967.1|BJ467967 BJ467967 K. Sato unpublished cDNA li... 533 e-150
gb|BJ466653.1|BJ466653 BJ466653 K. Sato unpublished cDNA li... 529 e-148
gb|BQ756731.1|BQ756731 EBem09_SQ003_J13_R embryo, 1 Day ger... 523 e-147
gb|BI776914.2|BI776914 EBpi03_SQ001_F19_R pistil, 4 DPA, no... 513 e-144
gb|BM442821.2|BM442821 EBro02_SQ001_G08_R root, 3 week, hyd... 513 e-144
gb|BI958896.1|BI958896 HVSMEn0017B09f Hordeum vulgare rachi... 509 e-142
gb|BQ463470.1|BQ463470 HI05G01r HI Hordeum vulgare subsp. v... 505 e-141
gb|AV918153.1|AV918153 AV918153 K. Sato unpublished cDNA li... 502 e-140
gb|BF260772.2|BF260772 HVSMEf0022O12f Hordeum vulgare seedl... 484 e-135
gb|BI959152.1|BI959152 HVSMEn0018G12f Hordeum vulgare rachi... 484 e-135
gb|BU983773.1|BU983773 HA31A05r HA Hordeum vulgare subsp. v... 484 e-135
gb|BU984019.1|BU984019 HA31L23r HA Hordeum vulgare subsp. v... 484 e-135
gb|BU994116.1|BU994116 HM05M18r HM Hordeum vulgare subsp. v... 476 e-132
gb|AJ432034.1|AJ432034 AJ432034 S00002 Hordeum vulgare subs... 472 e-131
gb|AL510412.1|AL510412 AL510412 Hordeum vulgare Barke devel... 468 e-130
gb|BQ662350.1|BQ662350 HS01P12w HS Hordeum vulgare subsp. v... 466 e-129
gb|BJ464802.1|BJ464802 BJ464802 K. Sato unpublished cDNA li... 462 e-128
gb|BQ760165.1|BQ760165 EBpi07_SQ003_K12_R pistil, 12 DPA, n... 462 e-128
gb|AL508901.1|AL508901 AL508901 Hordeum vulgare Barke devel... 456 e-126
gb|AV916045.1|AV916045 AV916045 K. Sato unpublished cDNA li... 450 e-125
gb|AV916306.1|AV916306 AV916306 K. Sato unpublished cDNA li... 448 e-124
gb|BF619636.2|BF619636 HVSMEc0008A14f Hordeum vulgare seedl... 446 e-123
gb|AV920622.1|AV920622 AV920622 K. Sato unpublished cDNA li... 444 e-123
gb|BG309280.1|BG309280 HVSMEc0006P01f Hordeum vulgare seedl... 442 e-122
gb|BU997483.1|BU997483 HI08C03r HI Hordeum vulgare subsp. v... 424 e-117
gb|CA024930.1|CA024930 HZ50L17r HZ Hordeum vulgare subsp. v... 416 e-114
gb|BF628180.2|BF628180 HVSMEb0003F15f Hordeum vulgare seedl... 412 e-113
gb|BG344996.2|BG344996 HVSMEg0018D17f Hordeum vulgare pre-a... 412 e-113
gb|CA003702.1|CA003702 HS15E20r HS Hordeum vulgare subsp. v... 408 e-112
gb|BJ463675.1|BJ463675 BJ463675 K. Sato unpublished cDNA li... 400 e-110
gb|AL506993.1|AL506993 AL506993 Hordeum vulgare Barke devel... 391 e-107
gb|AV909356.1|AV909356 AV909356 K. Sato unpublished cDNA li... 389 e-106
gb|AV911246.1|AV911246 AV911246 K. Sato unpublished cDNA li... 389 e-106
gb|CA021411.1|CA021411 HZ40A11r HZ Hordeum vulgare subsp. v... 389 e-106
gb|BQ740224.1|BQ740224 HC114C09 HC Hordeum vulgare subsp. v... 387 e-105
gb|CA019890.1|CA019890 HV13K02r HV Hordeum vulgare subsp. v... 387 e-105
gb|AL507609.1|AL507609 AL507609 Hordeum vulgare Barke devel... 375 e-102
gb|AV916030.1|AV916030 AV916030 K. Sato unpublished cDNA li... 375 e-102
gb|BM097230.2|BM097230 EBpi07_SQ002_M24_R pistil, 12 DPA, n... 375 e-102
gb|BQ762433.1|BQ762433 EBro01_SQ005_H19_R root, 3 week, hyd... 375 e-102
gb|BJ463554.1|BJ463554 BJ463554 K. Sato unpublished cDNA li... 371 e-101
gb|BI959557.1|BI959557 HVSMEn0020C22f Hordeum vulgare rachi... 353 2e-095
gb|BJ467893.1|BJ467893 BJ467893 K. Sato unpublished cDNA li... 353 2e-095
gb|AV917477.1|AV917477 AV917477 K. Sato unpublished cDNA li... 349 2e-094
gb|BF616088.2|BF616088 HVSMEc0001N05f Hordeum vulgare seedl... 341 6e-092
gb|AL504669.1|AL504669 AL504669 Hordeum vulgare Barke roots... 339 2e-091
gb|AL508647.1|AL508647 AL508647 Hordeum vulgare Barke devel... 337 9e-091
gb|AJ463225.1|AJ463225 AJ463225 S00002 Hordeum vulgare subs... 335 4e-090
gb|CB880777.1|CB880777 HM07M18w HM Hordeum vulgare subsp. v... 335 4e-090
gb|AL500754.1|AL500754 AL500754 Hordeum vulgare Barke roots... 333 1e-089
gb|CA007348.1|CA007348 HU07K12r HU Hordeum vulgare subsp. v... 333 1e-089
gb|CA026863.1|CA026863 HZ57D02r HZ Hordeum vulgare subsp. v... 321 5e-086
gb|BI958137.1|BI958137 HVSMEn0013J09f Hordeum vulgare rachi... 317 9e-085
gb|BF257056.2|BF257056 HVSMEf0011L20f Hordeum vulgare seedl... 315 3e-084
gb|BQ766482.1|BQ766482 EBro08_SQ006_N06_R root, 3 week, dro... 311 5e-083
gb|AV914685.1|AV914685 AV914685 K. Sato unpublished cDNA li... 305 3e-081
gb|AV916593.1|AV916593 AV916593 K. Sato unpublished cDNA li... 305 3e-081
gb|CA025630.1|CA025630 HZ52L09r HZ Hordeum vulgare subsp. v... 305 3e-081
gb|BF261636.3|BF261636 HV_CEa0001M22f Hordeum vulgare seedl... 297 8e-079
gb|AL502363.1|AL502363 AL502363 Hordeum vulgare Barke roots... 291 5e-077
gb|AV918120.1|AV918120 AV918120 K. Sato unpublished cDNA li... 291 5e-077
gb|AV919777.1|AV919777 AV919777 K. Sato unpublished cDNA li... 291 5e-077
gb|BU970993.1|BU970993 HB16E19r BC Hordeum vulgare subsp. v... 278 7e-073
gb|AV915738.1|AV915738 AV915738 K. Sato unpublished cDNA li... 272 5e-071
gb|CA025709.1|CA025709 HZ52O20r HZ Hordeum vulgare subsp. v... 270 2e-070
gb|BI959343.1|BI959343 HVSMEn0019F02f Hordeum vulgare rachi... 266 3e-069
gb|BQ766369.1|BQ766369 EBro08_SQ005_E20_R root, 3 week, dro... 254 1e-065
gb|BU994867.1|BU994867 HM08H04r HM Hordeum vulgare subsp. v... 252 4e-065
gb|AV921737.1|AV921737 AV921737 K. Sato unpublished cDNA li... 250 2e-064
gb|BF619581.2|BF619581 HVSMEc0004G17f Hordeum vulgare seedl... 242 4e-062
gb|AL509867.1|AL509867 AL509867 Hordeum vulgare Barke devel... 240 2e-061
gb|BI948049.1|BI948049 HVSMEl0007P24f Hordeum vulgare spike... 238 6e-061
gb|CB880990.1|CB880990 HM08H04w HM Hordeum vulgare subsp. v... 228 6e-058
gb|BQ467197.1|BQ467197 HS02P12r HS Hordeum vulgare subsp. v... 222 4e-056
gb|AL500306.1|AL500306 AL500306 Hordeum vulgare Barke etiol... 216 2e-054
gb|CB858524.1|CB858524 HI07F20w HI Hordeum vulgare subsp. v... 210 1e-052
gb|BM370864.2|BM370864 EBro04_SQ002_J12_R root, 3 week, sal... 198 5e-049
gb|CV054745.1|CV054745 BNEL112h10 Barley EST endosperm libr... 196 2e-048
gb|BE455861.3|BE455861 HVSMEg0015N13f Hordeum vulgare pre-a... 186 2e-045
gb|BQ739900.1|BQ739900 HB05E08 HB Hordeum vulgare subsp. vu... 174 8e-042
gb|BQ739988.1|BQ739988 HB107G05 HB Hordeum vulgare subsp. v... 174 8e-042
gb|BQ740120.1|BQ740120 HC107H03 HC Hordeum vulgare subsp. v... 174 8e-042
gb|BI959146.1|BI959146 HVSMEn0018G05f Hordeum vulgare rachi... 167 2e-039
gb|BF259284.2|BF259284 HVSMEf0018M04f Hordeum vulgare seedl... 165 8e-039
gb|AJ462404.1|AJ462404 AJ462404 S00002 Hordeum vulgare subs... 153 3e-035
gb|AJ462405.1|AJ462405 AJ462405 S00002 Hordeum vulgare subs... 153 3e-035
gb|CA007928.1|CA007928 HU09G15r HU Hordeum vulgare subsp. v... 147 2e-033
gb|AL511829.1|AL511829 AL511829 Hordeum vulgare Barke devel... 145 7e-033
gb|BF257421.2|BF257421 HVSMEf0012N20f Hordeum vulgare seedl... 145 7e-033
gb|AV920851.1|AV920851 AV920851 K. Sato unpublished cDNA li... 145 7e-033
gb|AV921149.1|AV921149 AV921149 K. Sato unpublished cDNA li... 145 7e-033
gb|AV921164.1|AV921164 AV921164 K. Sato unpublished cDNA li... 145 7e-033
gb|BJ467846.1|BJ467846 BJ467846 K. Sato unpublished cDNA li... 145 7e-033
gb|BJ466501.1|BJ466501 BJ466501 K. Sato unpublished cDNA li... 141 1e-031
gb|AW982536.3|AW982536 HVSMEg0003I12f Hordeum vulgare pre-a... 139 4e-031
gb|BQ459760.1|BQ459760 HA08C16r HA Hordeum vulgare subsp. v... 139 4e-031
gb|BQ657495.1|BQ657495 HA08C16u HA Hordeum vulgare subsp. v... 139 4e-031
gb|AL512025.1|AL512025 AL512025 Hordeum vulgare Barke devel... 133 3e-029
gb|AJ435096.1|AJ435096 AJ435096 S00002 Hordeum vulgare subs... 133 3e-029
gb|BQ662559.1|BQ662559 HS02P12u HS Hordeum vulgare subsp. v... 133 3e-029
gb|BU971118.1|BU971118 HB16K16r BC Hordeum vulgare subsp. v... 131 1e-028
gb|BU983739.1|BU983739 HA30O06r HA Hordeum vulgare subsp. v... 121 1e-025
gb|BQ760622.1|BQ760622 EBro03_SQ002_M21_R root, 3 week, wat... 115 6e-024
gb|BI957972.1|BI957972 HVSMEn0012L17f Hordeum vulgare rachi... 94 2e-017
gb|BI958281.1|BI958281 HVSMEn0014D12f Hordeum vulgare rachi... 94 2e-017
gb|BJ467113.1|BJ467113 BJ467113 K. Sato unpublished cDNA li... 84 2e-014
gb|BU999760.1|BU999760 HI15K19r HI Hordeum vulgare subsp. v... 74 2e-011
gb|BU967567.1|BU967567 HB04L04r BC Hordeum vulgare subsp. v... 66 5e-009
>gb|CK125199.1|CK125199 BES1824107d13 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D137 5-PRIME, mRNA sequence
Length = 855
Score = 1055 bits (532), Expect = 0.0
Identities = 764/840 (90%), Gaps = 1/840 (0%)
Strand = Plus / Plus
Query: 437 gatgtctccaagtctgacaagattgttgttgagaagtccactgtccctgtcaagaccgct 496
||||| |||||||| |||||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 4 gatgtgtccaagtccgacaagatcgtcgttgagaagtccactgtccctgtcaagactgca 63
Query: 497 gaggctattgagaagatcttgacccacaacagcaagggcatcaactaccagatcctttcc 556
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 64 gaggccattgagaagatcttgactcacaacagcaagggcatcaactaccagatcctctcc 123
Query: 557 aacccagagttccttgcagagggcactgctattgaggacctgttcaagcctgacagagtg 616
||||| |||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 124 aacccggagttcctggccgagggcacggccatcgacgacctgttcaagcctgacagggta 183
Query: 617 ctcatcggtggccgggagacccccgagggcaggaaagccgtccaggctctcaaggatgtg 676
|| |||||||| ||||||||||||||||||||||| || || |||||||||||||| |||
Sbjct: 184 cttatcggtggtcgggagacccccgagggcaggaaggcggttcaggctctcaaggaggtg 243
Query: 677 tacgctcactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctc 736
||||| |||||||||| ||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 244 tacgccaactgggttcctgaggagaacatcatcaccaccaacctgtggtctgctgagctc 303
Query: 737 tccaagctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctcc 796
||||||||||||||||| |||||| |||| |||||||||||||||||||| ||||| |||
Sbjct: 304 tccaagctcgctgccaatgcgttcttggcccagaggatctcctctgtgaatgccatgtcc 363
Query: 797 gccctctgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggac 856
|| ||||||||||| ||||| || || ||| |||||||| |||||||| | |||||||||
Sbjct: 364 gcgctctgcgaggctaccggtgctaacgtgtctgaggtgtcttacgccatcggcaaggac 423
Query: 857 acgaggattggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccag 916
| ||||| ||||||||||||||||||||||| ||||||||||| ||||| || ||||||
Sbjct: 424 tccaggatcggccccaagttcctgaacgccagcgttgggttcggcgggtcctgtttccag 483
Query: 917 aaggacatcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaac 976
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 484 aaggacatcctgaacctggtgtacatctgcgagtgcaacggcctccccgaggtggccaac 543
Query: 977 tactggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtc 1036
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 544 tactggaagcaggtgatcaagatcaacgactaccagaagagcaggttcgtgaaccgtgtt 603
Query: 1037 gtgtcgtccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttc 1096
||||| |||||||||||||||||| ||||||||||| | || |||||||| |||||||||
Sbjct: 604 gtgtcctccatgttcaacaccgtctccggcaagaaggtggctgtcctcgggttcgccttc 663
Query: 1097 aagaaggacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctg 1156
|||||||||||||| |||||||||||||||||||| || || || |||||||||||| ||
Sbjct: 664 aagaaggacaccggtgacaccagggagaccccggcaattgacgtgtgcaagggcctgttg 723
Query: 1157 ggtgacaaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgg 1216
||||||||||||||| ||||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 724 ggtgacaaggcccaggtcagcatctacgatccccaggtcaccgaggaccagatccagcgg 783
Query: 1217 gacctggccatgaacaagttcgactggga-ccacccgatgcacctgcagccgacgagccc 1275
||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 784 gacctcgccatgaacaagttcgactggganccacccaatgcacctgcagccgacgagccc 843
>gb|AV915524.1|AV915524 AV915524 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14o14 5', mRNA sequence
Length = 621
Score = 934 bits (471), Expect = 0.0
Identities = 580/615 (94%), Gaps = 1/615 (0%)
Strand = Plus / Plus
Query: 925 cctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactggaa 984
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 2 cctgaacctggtgtacatctgcgagtgcaacggcctgccggaggtggccaactactggaa 61
Query: 985 gcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtc 1044
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 62 gcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtggtgtcgtc 121
Query: 1045 catgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaagga 1104
||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 122 catgttcaacaccgtgtccggcaagaagatcgccgtgctcgggttcgccttcaagaagga 181
Query: 1105 caccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgacaa 1164
|||||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 182 taccggcgacacccgggagaccccggccatcgacgtgtgcaagggcctgctgggcgacaa 241
Query: 1165 ggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctggc 1224
||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 242 ggcccaggtgagcatctacgacccccaggtgacggaggaccagatccagcgcgacctggc 301
Query: 1225 catgaacaagttcgactgggaccacccgatgcacctgcagccgacgagcccgacggccgt 1284
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 302 catgaacaagttcgactgggaccacccgatgcacctgcagccgacgagccccacggccgt 361
Query: 1285 gaagcaggtgagctgcgtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtg 1344
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 362 gaagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggcgcccacgccgtgtg 421
Query: 1345 catcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacat 1404
|||||| ||||||||| ||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 422 catcctcaccgagtggaacgagttcaagtcgctggactacaagaagatcttcgacaacat 481
Query: 1405 gcagaagcccgccttcgtcttcgacggccgcaacatcgtcgactccgagaagctgaggga 1464
||||||||| |||||||||||||||||||||||| |||||||| |||||||||| |||||
Sbjct: 482 gcagaagccggccttcgtcttcgacggccgcaacgtcgtcgacgccgagaagctcaggga 541
Query: 1465 gatcggcttcatcgtctactccatcggcaagccgctcgacgcctggctcaaggacatg-c 1523
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 542 gatcggcttcatcgtctactccatcggcaagccgctcgacgggtggctcaaggacatgcc 601
Query: 1524 ccgcggtcgcctaat 1538
|||| ||||||||||
Sbjct: 602 ccgccgtcgcctaat 616
>gb|CK122417.1|CK122417 BES1824103e24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010E243 5-PRIME, mRNA sequence
Length = 616
Score = 926 bits (467), Expect = 0.0
Identities = 574/610 (94%)
Strand = Plus / Plus
Query: 869 cccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggacatcctg 928
|||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||
Sbjct: 7 cccaagttcctgaacgccagcgtcgggttcggcgggtcgtgcttccagaaggacatcctg 66
Query: 929 aacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactggaagcag 988
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 67 aacctggtgtacatctgcgagtgcaacggcctgccggaggtggccaactactggaagcag 126
Query: 989 gtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatg 1048
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 127 gtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtggtgtcgtccatg 186
Query: 1049 ttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacacc 1108
||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 187 ttcaacaccgtgtccggcaagaagatcgccgtgctcgggttcgccttcaagaaggatacc 246
Query: 1109 ggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcc 1168
||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 247 ggcgacacccgggagaccccggccatcgacgtgtgcaagggcctgctgggcgacaaggcc 306
Query: 1169 cagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctggccatg 1228
||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 307 caggtgagcatctacgacccccaggtgacggaggaccagatccagcgcgacctggccatg 366
Query: 1229 aacaagttcgactgggaccacccgatgcacctgcagccgacgagcccgacggccgtgaag 1288
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 367 aacaagttcgactgggaccacccgatgcacctgcagccgacgagccccacggccgtgaag 426
Query: 1289 caggtgagctgcgtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatc 1348
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 427 caggtgagcgtggtgtgggacgcgtacgaggccaccaagggcgcccacgccgtgtgcatc 486
Query: 1349 ctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcag 1408
|| ||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||
Sbjct: 487 ctcaccgagtggaacgagttcaagtcgctggactacaagaagatcttcgacaacatgcag 546
Query: 1409 aagcccgccttcgtcttcgacggccgcaacatcgtcgactccgagaagctgagggagatc 1468
||||| |||||||||||||||||||||||| |||||||| |||||||||| | |||||||
Sbjct: 547 aagccggccttcgtcttcgacggccgcaacgtcgtcgacgccgagaagctcanggagatc 606
Query: 1469 ggcttcatcg 1478
||||||||||
Sbjct: 607 ggcttcatcg 616
>gb|BM370842.2|BM370842 EBro04_SQ002_H20_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_H20 5', mRNA sequence
Length = 650
Score = 896 bits (452), Expect = 0.0
Identities = 554/588 (94%)
Strand = Plus / Plus
Query: 951 gcaatggcctgcccgaggtggccaactactggaagcaggtgatcaagatcaacgactacc 1010
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaacggcctgccggaggtggccaactactggaagcaggtgatcaagatcaacgactacc 60
Query: 1011 agaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccggcaaga 1070
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 61 agaagagccggttcgtgaaccgcgtggtgtcgtccatgttcaacaccgtgtccggcaaga 120
Query: 1071 agatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccagggagaccccgg 1130
|||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 121 agatcgccgtgctcgggttcgccttcaagaaggataccggcgacacccgggagaccccgg 180
Query: 1131 ccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacgaccccc 1190
||||||| || ||||||||||||||||| |||||||||||| | ||||||||||||||||
Sbjct: 181 ccatcgacgtgtgcaagggcctgctgggcgacaaggcccaggtgagcatctacgaccccc 240
Query: 1191 aggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactgggaccacc 1250
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 241 aggtgacggaggaccagatccagcgcgacctggccatgaacaagttcgactgggaccacc 300
Query: 1251 cgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagctgcgtgtgggacg 1310
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 301 cgatgcacctgcagccgacgagccccacggccgtgaagcaggtgagcgtggtgtgggacg 360
Query: 1311 cgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgggacgagttca 1370
||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||
Sbjct: 361 cgtacgaggccaccaagggcgcccacgccgtgtgcatcctcaccgagtggaacgagttca 420
Query: 1371 agaccctggactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacg 1430
|| | ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 421 agtcgctggactacaagaagatcttcgacaacatgcagaagccggccttcgtcttcgacg 480
Query: 1431 gccgcaacatcgtcgactccgagaagctgagggagatcggcttcatcgtctactccatcg 1490
|||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 gccgcaacgtcgtcgacgccgagaagctcagggagatcggcttcatcgtctactccatcg 540
Query: 1491 gcaagccgctcgacgcctggctcaaggacatgcccgcggtcgcctaat 1538
||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 541 gcaagccgctcgacgggtggctcaaggacatgcccgccgtcgcctaat 588
>gb|BF629636.2|BF629636 HVSMEb0012P16f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0012P16f, mRNA sequence
Length = 849
Score = 886 bits (447), Expect = 0.0
Identities = 700/779 (89%), Gaps = 4/779 (0%)
Strand = Plus / Plus
Query: 492 ccgctgaggctattgagaagatcttgacccacaacagcaagggcatcaactaccagatcc 551
|||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4 ccgcagaggccattgagaagatcctgacccacaacagcaagggcatcaactaccagatcc 63
Query: 552 tttccaacccagagttccttgcagagggcactgctattgaggacctgttcaagcctgaca 611
| |||||||| |||||||| || ||||||||||| || || |||||||||||||| ||||
Sbjct: 64 tgtccaacccggagttcctcgccgagggcactgcgatcgacgacctgttcaagcccgaca 123
Query: 612 gagtgctcatcggtggccgggagacccccgagggcaggaaagccgtccaggctctcaagg 671
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 124 gagtgctcatcggtggccgggagacccccgagggcaggaaggccgtcgaggctctcaagt 183
Query: 672 atgtgtacgctcactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctg 731
|||||||| |||||||| |||||||| | ||| |||||||||||||||||||||| |
Sbjct: 184 cggtgtacgcccactgggtgcccgaggagaacatcatcaccaccaacctgtggtctgccg 243
Query: 732 agctctccaagctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgcca 791
|||||||||||||||| |||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 244 agctctccaagctcgccgccaacgccttcctggcccagaggatctcgtccgtgaacgcca 303
Query: 792 tctccgccctctgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggca 851
| || || || ||||||||||| ||||| || ||| | |||||| | |||||| | ||||
Sbjct: 304 tgtcggcgctgtgcgaggccacgggcgccaacgtgtcggaggtgtcgtacgccatcggca 363
Query: 852 aggacacgaggattggccccaagttcctgaacgccagtgttgggttcggtgggtcttgct 911
||||| ||||||| || |||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 364 aggactcgaggatcggtcccaagttcctgaacgccagcgtcgggttcggcgggtcgtgct 423
Query: 912 tccagaaggacatcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtgg 971
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 424 tccagaaggacatcctgaacctggtgtacatctgcgagtgcaacggcctgccggaggtgg 483
Query: 972 ccaactactggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaacc 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ccaactactggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaacc 543
Query: 1032 gcgtcgtgtcgtccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcg 1091
|||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||
Sbjct: 544 gcgtggtgtcgtccatgttcaacaccgtgtccggcaagaagatcgccgtgctcgggttcg 603
Query: 1092 ccttcaagaaggacaccggcgaca-ccagggagaccccggccatcgatgtctgcaagggc 1150
||||||||||||| |||||||||| || ||||||||||||||||||| || |||||||||
Sbjct: 604 ccttcaagaaggataccggcgacacccggggagaccccggccatcgacgtgtgcaagggc 663
Query: 1151 ctgctgggtgacaaggcccagatcagcatctacgacccccaggtgacggaggaccagatc 1210
|||||||| |||||||||||| | ||||||||||||||| |||||||||||||| ||
Sbjct: 664 ctgctgggcgacaaggcccag-tgagcatctacgaccccgcagtgacggaggacca-ata 721
Query: 1211 cagcgggacctggccatgaacaagttcgactgggaccacccgatgcacctgcagccgac 1269
|| ||||| ||| | ||||||||| ||| |||||||||||||||| |||| |||||
Sbjct: 722 tcacgcgacct-gcccttaacaagttccacttggaccacccgatgcacttgcacccgac 779
>gb|BM816402.1|BM816402 HC108C02_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108C02_SK.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 891
Score = 880 bits (444), Expect = 0.0
Identities = 725/818 (88%), Gaps = 1/818 (0%)
Strand = Plus / Plus
Query: 239 atctacgagcctggtctcgatgatgttgtgaagcagtgcaggggcaggaacctcttcttc 298
|||||||||||||| |||||||||||||| ||| |||||||||| |||||||||||||
Sbjct: 33 atctacgagcctggcctcgatgatgttgtcaaggcctgcaggggcaagaacctcttcttc 92
Query: 299 agcactgatgttgagaagcacgtcgctgaggctgacattatctttgtctcggtgaacacc 358
|||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| || ||||||
Sbjct: 93 agcactgatgttgagaagcatgtcgccgaggccgacatcatcttcgtctccgtcaacacc 152
Query: 359 cccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggagagc 418
||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 153 cccaccaagacccgtggtctgggagccggcaaggctgccgacctcacctactgggagagc 212
Query: 419 gctgcccgcatgattgcggatgtctccaagtctgacaagattgttgttgagaagtccact 478
|| ||||| ||||| || ||||| |||||||| || ||||| || || |||||||||||
Sbjct: 213 gccgcccggatgatcgccgatgtgtccaagtcggataagatcgtcgtcgagaagtccacc 272
Query: 479 gtccctgtcaagaccgctgaggctattgagaagatcttgacccacaacagcaagggcatc 538
||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 273 gtccccgtcaagaccgcagaggccattgagaagatcctgacccacaacagcaagggcatc 332
Query: 539 aactaccagatcctttccaacccagagttccttgcagagggcactgctattgaggacctg 598
|||||||||||||| |||||||| |||||||| || ||||||||||| || || ||||||
Sbjct: 333 aactaccagatcctgtccaacccggagttcctcgccgagggcactgcgatcgacgacctg 392
Query: 599 ttcaagcctgacagagtgctcatcggtggccgggagacccccgagggcaggaaagccgtc 658
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 393 ttcaagcccgacagagtgctcatcggtggccgggagacccccgagggcaggaaggccgtc 452
Query: 659 caggctctcaaggatgtgtacgctcactgggttcccgaggacaggatcctcaccaccaac 718
||||||||||| |||||||| |||||||| |||||||| | ||| |||||||||||
Sbjct: 453 gaggctctcaagtcggtgtacgcccactgggtgcccgaggagaacatcatcaccaccaac 512
Query: 719 ctgtggtctgctgagctctccaagctcgctgccaacgcgttcctggcacagaggatctcc 778
||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 513 ctgtggtctgccgagctctccaagctcgccgccaacgccttcctggcccagaggatctcg 572
Query: 779 tctgtgaacgccatctccgccctctgcgaggccaccggcgcgaatgtgactgaggtggct 838
|| ||||||||||| || || || ||||||||||| ||||| || ||| | |||||| |
Sbjct: 573 tccgtgaacgccatgtcggcgctgtgcgaggccacgggcgccaacgtgtcggaggtgtcg 632
Query: 839 tacgccgtgggcaaggacacgaggattggccccaagttcctgaacgccagtgttgggttc 898
|||||| | ||||||||| ||||||| || |||||||||||||||||||| || ||||||
Sbjct: 633 tacgccatcggcaaggactcgaggatcggtcccaagttcctgaacgccagcgtcgggttc 692
Query: 899 ggtgggtcttgcttccagaaggacatcctgaacctggtgtacatctgcgagtgcaatggc 958
|| ||||| |||||||||||||||||||| ||| |||||||||||||||||||| | |
Sbjct: 693 ggcgggtcgtgcttccagaaggacatccttgaccctgtgtacatctgcgagtgcaacgcc 752
Query: 959 ctgcccgaggtggccaactactggaagcaggtgatcaagatcaacgactaccagaagagc 1018
||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 753 ctgccggnagtggccaactactggaagcaggtgatcaagatcaacgactaccanaagaag 812
Query: 1019 cggttcgtg-aaccgcgtcgtgtcgtccatgttcaaca 1055
| ||||||| |||||||| |||||| |||||||||||
Sbjct: 813 ccgttcgtgaaaccgcgtgttgtcgttcatgttcaaca 850
>gb|BQ462810.1|BQ462810 HI02B08r HI Hordeum vulgare subsp. vulgare cDNA clone HI02B08
5-PRIME, mRNA sequence
Length = 634
Score = 880 bits (444), Expect = 0.0
Identities = 585/632 (92%)
Strand = Plus / Plus
Query: 782 gtgaacgccatctccgccctctgcgaggccaccggcgcgaatgtgactgaggtggcttac 841
||||||||||| || || || ||||||||||| ||||| || ||| | |||||| | |||
Sbjct: 3 gtgaacgccatgtcggcgctgtgcgaggccacgggcgccaacgtgtcggaggtgtcgtac 62
Query: 842 gccgtgggcaaggacacgaggattggccccaagttcctgaacgccagtgttgggttcggt 901
||| | ||||||||| ||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 63 gccatcggcaaggactcgaggatcggtcccaagttcctgaacgccagcgtcgggttcggc 122
Query: 902 gggtcttgcttccagaaggacatcctgaacctggtgtacatctgcgagtgcaatggcctg 961
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 123 gggtcgtgcttccagaaggacatcctgaacctggtgtacatctgcgagtgcaacggcctg 182
Query: 962 cccgaggtggccaactactggaagcaggtgatcaagatcaacgactaccagaagagccgg 1021
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ccggaggtggccaactactggaagcaggtgatcaagatcaacgactaccagaagagccgg 242
Query: 1022 ttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccggcaagaagatcgccgtc 1081
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 243 ttcgtgaaccgcgtggtgtcgtccatgttcaacaccgtgtccggcaagaagatcgccgtg 302
Query: 1082 ctcggcttcgccttcaagaaggacaccggcgacaccagggagaccccggccatcgatgtc 1141
||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||| ||
Sbjct: 303 ctcgggttcgccttcaagaaggataccggcgacacccgggagaccccggccatcgacgtg 362
Query: 1142 tgcaagggcctgctgggtgacaaggcccagatcagcatctacgacccccaggtgacggag 1201
||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||
Sbjct: 363 tgcaagggcctgctgggcgacaaggcccaggtgagcatctacgacccccaggtgacggag 422
Query: 1202 gaccagatccagcgggacctggccatgaacaagttcgactgggaccacccgatgcacctg 1261
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaccagatccagcgcgacctggccatgaacaagttcgactgggaccacccgatgcacctg 482
Query: 1262 cagccgacgagcccgacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgaggcc 1321
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 483 cagccgacgagccccacggccgtgaagcaggtgagcgtggtgtgggacgcgtacgaggcc 542
Query: 1322 accaagggcgcccacgggctgtgcatcctgaccgagtgggacgagttcaagaccctggac 1381
|||||||||||||||| |||||||||| ||||||||| ||||||||||| | ||||||
Sbjct: 543 accaagggcgcccacgccgtgtgcatcctcaccgagtggaacgagttcaagtcgctggac 602
Query: 1382 taccagaagatcttcgacaacatgcagaagcc 1413
||| ||||||||||||||||||||||||||||
Sbjct: 603 tacaagaagatcttcgacaacatgcagaagcc 634
>gb|AL507827.1|AL507827 AL507827 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06P11V 5',
mRNA sequence
Length = 698
Score = 827 bits (417), Expect = 0.0
Identities = 592/648 (91%), Gaps = 3/648 (0%)
Strand = Plus / Plus
Query: 616 gctcatcggtggccgggagacccccgagggcaggaaagccgtccaggctctcaaggatgt 675
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||
Sbjct: 8 gctcatcggtggccgggagacccccgagggcaggaaggccgtcgaggctctcaagtcggt 67
Query: 676 gtacgctcactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagct 735
|||||| |||||||| |||||||| | ||| |||||||||||||||||||||| |||||
Sbjct: 68 gtacgcccactgggtgcccgaggagaacatcatcaccaccaacctgtggtctgccgagct 127
Query: 736 ctccaagctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctc 795
|||||||||||| |||||||| |||||||| ||||||||||| || ||||||||||| ||
Sbjct: 128 ctccaagctcgccgccaacgccttcctggcccagaggatctcgtccgtgaacgccatgtc 187
Query: 796 cgccctctgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaagga 855
|| || ||||||||||| ||||| || ||| | |||||| | |||||| | ||||||||
Sbjct: 188 ggcgctgtgcgaggccacgggcgccaacgtgtcggaggtgtcgtacgccatcggcaagga 247
Query: 856 cacgaggattggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttcca 915
| ||||||| || |||||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 248 ctcgaggatcggtcccaagttcctgaacgccagcgtcgggttcggcgggtcgtgcttcca 307
Query: 916 gaaggacatcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaa 975
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 308 gaaggacatcctgaacctggtgtacatctgcgagtgcaacggcctgccggaggtggccaa 367
Query: 976 ctactggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgt 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctactggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgt 427
Query: 1036 cgtgtcgtccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgcctt 1095
||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||
Sbjct: 428 ggtgtcgtccatgttcaacaccgtgtccggcaagaagatcgccgtgctcgggttcgcctt 487
Query: 1096 caagaaggacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgct 1155
||||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||
Sbjct: 488 caagaaggataccggcgacacccgggagaccccggccatcgacgtgtgcaagggcctgct 547
Query: 1156 gggtgacaaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcg 1215
||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gggcgacaaggcccaggtgagcatctacgacccccaggtgacggaggaccagatccagcg 607
Query: 1216 ggacctggccat--gaacaagttcgactgggacca-cccgatgcacct 1260
||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 608 cgacctggccattgaaacaagttcgactgggaccaccccgatgcacct 655
>gb|AL503349.1|AL503349 AL503349 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01M02T 5', mRNA sequence
Length = 700
Score = 823 bits (415), Expect = 0.0
Identities = 625/695 (89%)
Strand = Plus / Plus
Query: 89 gacaaaatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggcc 148
||||| ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 6 gacaagatggtgaagatctgctgcatcggagctggctatgtcggcggcccaacaatggcc 65
Query: 149 gtcattgccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgc 208
||||||||| |||||||||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 66 gtcattgccgtcaagtgcccagcaattgaggttgttgttgttgacatctccaagcctcgc 125
Query: 209 attgaggcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtg 268
||||| || |||||||| ||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 126 attgacgcttggaacagcgacacactcccaatttacgagcctggcctcgatgaggttgtc 185
Query: 269 aagcagtgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgag 328
||| ||||||||||| ||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 186 aaggcgtgcaggggcaagaacctcttcttcagcactgacgtcgagaagcacgttgctgag 245
Query: 329 gctgacattatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggc 388
|| ||||| ||||| ||||| |||||||||||||||||||||||||| || ||||| |||
Sbjct: 246 gccgacatcatcttcgtctcagtgaacacccccaccaagacccgtggtctgggagccggc 305
Query: 389 aaggctgccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaag 448
|||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 306 aaggctgccgacctcacctactgggagagcgctgcccggatgatcgccgatgtgtccaag 365
Query: 449 tctgacaagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgag 508
|| |||||||| || ||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 366 tccgacaagatcgtcgttgagaagtccactgtccctgtcaagactgcagaggccattgag 425
Query: 509 aagatcttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttc 568
||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 426 aagatcttgactcacaacagcaagggcatcaactaccagatcctctccaacccggagttc 485
Query: 569 cttgcagagggcactgctattgaggacctgttcaagcctgacagagtgctcatcggtggc 628
|| || |||||||| || || || |||||||||||||||||||| || || ||||||||
Sbjct: 486 ctggccgagggcacggccatcgacgacctgttcaagcctgacagggtacttatcggtggt 545
Query: 629 cgggagacccccgagggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgg 688
||||||||||||||||||||||| || || |||||||||||||| |||||||| |||||
Sbjct: 546 cgggagacccccgagggcaggaaggcggttcaggctctcaaggaggtgtacgccaactgg 605
Query: 689 gttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaagctcgct 748
||||| ||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gttcctgaggagaacatcatcaccaccaacctgtggtctgctgagctctccaagctcgct 665
Query: 749 gccaacgcgttcctggcacagaggatctcctctgt 783
||||| |||||| |||| |||||||||||||||||
Sbjct: 666 gccaatgcgttcttggcccagaggatctcctctgt 700
>gb|BM816403.1|BM816403 HC108H05_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108H05_SK.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 886
Score = 813 bits (410), Expect = 0.0
Identities = 572/626 (91%)
Strand = Plus / Plus
Query: 911 ttccagaaggacatcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtg 970
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 35 ttccagaaggacatcctgaacctggtgtacatctgcgagtgcaacggcctccccgaggtg 94
Query: 971 gccaactactggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaac 1030
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 95 gccaactactggaagcaggtgatcaagatcaactactaccagaagagcaggttcgtgaac 154
Query: 1031 cgcgtcgtgtcgtccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttc 1090
|| || ||||| |||||||||||||||||| ||||||||||| | || |||||||| |||
Sbjct: 155 cgtgttgtgtcctccatgttcaacaccgtctccggcaagaaggtggctgtcctcgggttc 214
Query: 1091 gccttcaagaaggacaccggcgacaccagggagaccccggccatcgatgtctgcaagggc 1150
|||||||||||||||||||| |||||||||||||||||||| || || || |||||||||
Sbjct: 215 gccttcaagaaggacaccggtgacaccagggagaccccggcaattgacgtgtgcaagggc 274
Query: 1151 ctgctgggtgacaaggcccagatcagcatctacgacccccaggtgacggaggaccagatc 1210
||| ||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||
Sbjct: 275 ctgttgggtgacaaggcccaggtcagcatctacgatccccaggtcaccgaggaccagatc 334
Query: 1211 cagcgggacctggccatgaacaagttcgactgggaccacccgatgcacctgcagccgacg 1270
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 335 cagcgggacctcgccatgaacaagttcgactgggaccacccaatgcacctgcagccgacg 394
Query: 1271 agcccgacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgaggccaccaagggc 1330
||||| | | ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 395 agcccatcatctgtgaagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggg 454
Query: 1331 gcccacgggctgtgcatcctgaccgagtgggacgagttcaagaccctggactaccagaag 1390
||||| | |||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 455 gcccatgccgtgtgcatcctgaccgagtggaacgagttcaaggagctggactaccagaag 514
Query: 1391 atcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaacatcgtcgactcc 1450
|||||| |||||||||||||||| ||||||||||||||||| |||||| ||||| || ||
Sbjct: 515 atcttcaacaacatgcagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgcc 574
Query: 1451 gagaagctgagggagatcggcttcatcgtctactccatcggcaagccgctcgacgcctgg 1510
|| ||||| |||||||| |||||||| |||||||||||||||||||||||||| || |||
Sbjct: 575 gacaagctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtgg 634
Query: 1511 ctcaaggacatgcccgcggtcgccta 1536
|||||||||||||||||| |||||||
Sbjct: 635 ctcaaggacatgcccgcgatcgccta 660
>gb|BM816267.1|BM816267 HB105E10_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E10_SK.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 878
Score = 805 bits (406), Expect = 0.0
Identities = 505/538 (93%)
Strand = Plus / Plus
Query: 1001 aacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtc 1060
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 38 aacgactaccagaagagccggttcgtgaaccgcgtggtgtcgtccatgttcaacaccgtg 97
Query: 1061 gccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccagg 1120
||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||
Sbjct: 98 tccggcaagaagatcgccgtgctcgggttcgccttcaagaaggataccggcgacacccgg 157
Query: 1121 gagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatc 1180
||||||||||||||||| || ||||||||||||||||| |||||||||||| | ||||||
Sbjct: 158 gagaccccggccatcgacgtgtgcaagggcctgctgggcgacaaggcccaggtgagcatc 217
Query: 1181 tacgacccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcgac 1240
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 218 tacgacccgcaggtgacggaggaccagatccagcgcgacctggccatgaacaagttcgac 277
Query: 1241 tgggaccacccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagctgc 1300
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 278 tgggaccacccgatgcacctgcagccgacgagccccacggccgtgaagcaggtgagcgtg 337
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 338 gtgtgggacgcgtacgaggccaccaagggcgcccacgccgtgtgcatcctcaccgagtgg 397
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
||||||||||| | ||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 398 aacgagttcaagtcgctggactacaagaagatcttcgacaacatgcagaagccggccttc 457
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgagggagatcggcttcatcgtc 1480
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 458 gtcttcgacggccgcaacgtcgtcgacgccgagaagctcagggagatcggcttcatcgtc 517
Query: 1481 tactccatcggcaagccgctcgacgcctggctcaaggacatgcccgcggtcgcctaat 1538
||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 518 tactccatcggcaagccgctcgacgggtggctcaaggacatgcccgccgtcgcctaat 575
>gb|CV063161.1|CV063161 BNEL87c6 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL87c6 5' similar to putative UDP-glucose
dehydrogenase, mRNA sequence
Length = 698
Score = 803 bits (405), Expect = 0.0
Identities = 621/691 (89%), Gaps = 2/691 (0%)
Strand = Plus / Plus
Query: 755 gcgttcctggcacagaggatctcctctgtgaacgccatctccgccctctgcgaggccacc 814
|||||| |||| |||||||||||||||||||| ||||| ||||| ||||||||||| |||
Sbjct: 1 gcgttcttggcccagaggatctcctctgtgaatgccatgtccgcgctctgcgaggctacc 60
Query: 815 ggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgaggattggccccaag 874
|| || || ||| |||||||| |||||||| | ||||||||| | ||||| |||||||||
Sbjct: 61 ggtgctaacgtgtctgaggtgtcttacgccatcggcaaggactccaggatcggccccaag 120
Query: 875 ttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctg 934
|||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 121 ttcctgaacgccagcgttgggttcggcgggtcctgtttccagaaggacatcctgaacctg 180
Query: 935 gtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatc 994
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 gtgtacatctgcgagtgcaacggcctccccgaggtggccaactactggaagcaggtgatc 240
Query: 995 aagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaac 1054
|||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||||
Sbjct: 241 aagatcaacgactaccagaagagcaggttcgtgaaccgtgttgtgtcctccatgttcaac 300
Query: 1055 accgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgac 1114
|||||| ||||||||||| | || |||||||| ||||||||||||||||||||||| |||
Sbjct: 301 accgtctccggcaagaaggtggctgtcctcgggttcgccttcaagaaggacaccggtgac 360
Query: 1115 accagggagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatc 1174
||||||||||||||||| || || || |||||||||||| ||||||||||||||||| ||
Sbjct: 361 accagggagaccccggcaattgacgtgtgcaagggcctgttgggtgacaaggcccaggtc 420
Query: 1175 agcatctacgacccccaggtgacggaggaccagatccagcgggacctggccatgaacaag 1234
||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||
Sbjct: 421 agcatctacgatccccaggtcaccgaggaccagatccagcgggacctcgccatgaacaag 480
Query: 1235 ttcgactgggaccacccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtg 1294
||||||||||||||||| ||||||||||||||||||||||| | | |||||||| |||
Sbjct: 481 ttcgactgggaccacccaatgcacctgcagccgacgagcccatcatctgtgaagcangtg 540
Query: 1295 agctgcgtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgacc 1354
||| ||||||||||||||||||||||||||||| ||||| | ||||||||||||||
Sbjct: 541 agcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgcatcctgacc 600
Query: 1355 gagtgg-gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcc 1413
|||||| ||||| ||||| ||||||||||||||||||||| | |||||||||||||
Sbjct: 601 gagtggatacgag-tcaaggagctggactaccagaagatcttcaaacacatgcagaagcc 659
Query: 1414 cgccttcgtcttcgacggccgcaacatcgtc 1444
|||||||| |||||||| |||||| |||||
Sbjct: 660 ggccttcgtnttcgacgggcgcaacgtcgtc 690
>gb|BQ767763.1|BQ767763 EBro08_SQ009_D22_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_D22 5', mRNA sequence
Length = 539
Score = 799 bits (403), Expect = 0.0
Identities = 505/539 (93%)
Strand = Plus / Plus
Query: 883 cgccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtacat 942
|||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 cgccagcgtcgggttcggcgggtcgtgcttccagaaggacatcctgaacctggtgtacat 60
Query: 943 ctgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaagatcaa 1002
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgcgagtgcaacggcctgccggaggtggccaactactggaagcaggtgatcaagatcaa 120
Query: 1003 cgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgc 1062
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 121 cgactaccagaagagccggttcgtgaaccgcgtggtgtcgtccatgttcaacaccgtgtc 180
Query: 1063 cggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccaggga 1122
|||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||
Sbjct: 181 cggcaagaagatcgccgtgctcgggttcgccttcaagaaggataccggcgacacccggga 240
Query: 1123 gaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatcta 1182
||||||||||||||| || ||||||||||||||||| |||||||||||| | ||||||||
Sbjct: 241 gaccccggccatcgacgtgtgcaagggcctgctgggcgacaaggcccaggtgagcatcta 300
Query: 1183 cgacccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactg 1242
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 301 cgacccccaggtgacggaggaccagatccagcgcgacctggccatgaacaagttcgactg 360
Query: 1243 ggaccacccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagctgcgt 1302
||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||
Sbjct: 361 ggaccacccgatgcacctgcagccgacgagccccacggccgtgaagcaagtgagcgtggt 420
Query: 1303 gtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtggga 1362
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
Sbjct: 421 gtgggacgcgtacgaggccaccaagggcgcccacgccgtgtgcatcctcaccgagtggaa 480
Query: 1363 cgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttcg 1421
|||||||||| | ||||||||| |||||||||||||||||||||| ||||| |||||||
Sbjct: 481 cgagttcaagtcgctggactacaagaagatcttcgacaacatgcataagccggccttcg 539
>gb|BM816400.1|BM816400 HB01H04_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01H04_T3.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 837
Score = 793 bits (400), Expect = 0.0
Identities = 614/684 (89%), Gaps = 1/684 (0%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 154
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 117 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccaacaatggctgtcatt 176
Query: 155 gccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgcattgag 214
||| |||||||||||| |||||||| || ||||| |||||||||||||||||||||||
Sbjct: 177 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 236
Query: 215 gcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtgaagcag 274
||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||
Sbjct: 237 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 296
Query: 275 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 334
|||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 297 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 356
Query: 335 attatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 394
|| ||||| ||||| || ||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 357 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 416
Query: 395 gccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgac 454
|||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||| ||
Sbjct: 417 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggat 476
Query: 455 aagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatc 514
||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 477 aagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 536
Query: 515 ttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttccttgca 574
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 537 ctgacccacaacagcaagggcatcaactaccagatcctgtccaacccggagttcctcgcc 596
Query: 575 gagggcactgctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggag 634
||||||||||| || || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 597 gagggcactgcgatcgacgacctgttcaagcccgacagagtgctcatcggtggccgggag 656
Query: 635 acccccgagggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggttccc 694
||||||||||||||||| |||||| ||||||||||| |||||||| |||||||| |||
Sbjct: 657 acccccgagggcaggaaggccgtcgaggctctcaagtcggtgtacgcccactgggtgccc 716
Query: 695 gaggacaggatcctcaccacc-aacctgtggtctgctgagctctccaagctcgctgccaa 753
||||| | ||| |||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 717 gaggagaacatcatcaccaccaaacctgtggtctgccgagctctccaagctcgccgccaa 776
Query: 754 cgcgttcctggcacagaggatctc 777
||| || ||||| |||||||||||
Sbjct: 777 cgcctttctggcccagaggatctc 800
>gb|BE422168.1|BE422168 HWM021cA.04r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM021cA.04, mRNA sequence
Length = 1164
Score = 785 bits (396), Expect = 0.0
Identities = 614/683 (89%), Gaps = 3/683 (0%)
Strand = Plus / Plus
Query: 506 gagaagatcttgacccacaacagcaagggcatcaactaccagatcctttccaacccagag 565
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 121 gagaagatcttgactcacaacagcaagggcatcaactaccagatcctctccaacccggag 180
Query: 566 ttccttgcagagggcactgctattgaggacctgttcaagcctgacagagtgctcatcggt 625
||||| || |||||||| || || || |||||||||||||||||||| || || ||||||
Sbjct: 181 ttcctggccgagggcacggccatcgacgacctgttcaagcctgacagggtacttatcggt 240
Query: 626 ggccgggagacccccgagggcaggaaagccgtccaggctctcaaggatgtgtacgctcac 685
|| ||||||||||||||||||||||| || || |||||||||||||| |||||||| ||
Sbjct: 241 ggtcgggagacccccgagggcaggaaggcggttcaggctctcaaggaggtgtacgccaac 300
Query: 686 tgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaagctc 745
|||||||| ||||| | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgggttcctgaggagaacatcatcaccaccaacctgtggtctgctgagctctccaagctc 360
Query: 746 gctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctctgc 805
|||||||| |||||| |||| |||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 361 gctgccaatgcgttcttggcccagaggatctcctctgtgaatgccatgtccgcgctctgc 420
Query: 806 gaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgaggatt 865
||||| ||||| || || ||| |||||||| |||||||| | ||||||||| | |||||
Sbjct: 421 gaggctaccggtgctaacgtgtctgaggtgtcttacgccatcggcaaggactccaggatc 480
Query: 866 ggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggacatc 925
||||||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 481 ggccccaagttcctgaacgccagcgttgggttcggcgggtcctgtttccagaaggacatc 540
Query: 926 ctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactggaag 985
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 541 ctgaacctggtgtacatctgcgagtgcaacggcctccccgaggtggccaactactggaag 600
Query: 986 caggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtcc 1045
||||||||||||||||||||||||||||||||| ||||||||||||| || ||||| |||
Sbjct: 601 caggtgatcaagatcaacgactaccagaagagcaggttcgtgaaccgtgttgtgtcctcc 660
Query: 1046 atgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggac 1105
||||||||||||||| ||||||||||| | || |||||||| ||||||||||||||||||
Sbjct: 661 atgttcaacaccgtctccggcaagaaggtggctgtcctcgggttcgccttcaagaaggac 720
Query: 1106 accggcgacaccagggagaccccggccatcgatgtctgcaa-gggcctgctgggtgac-a 1163
| | | ||||||| |||||||||||| || || || ||||| ||||||| |||||||| |
Sbjct: 721 anccgtgacaccaaggagaccccggcaattgacgtgtgcaaggggcctgttgggtgacaa 780
Query: 1164 aggcccagatc-agcatctacga 1185
|||||||| || |||||||||||
Sbjct: 781 aggcccaggtcaagcatctacga 803
>gb|BM816401.1|BM816401 HC107A12_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC107A12_SK.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 842
Score = 781 bits (394), Expect = 0.0
Identities = 620/696 (89%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 154
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 133 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccaacaatggctgtcatt 192
Query: 155 gccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgcattgag 214
||| |||||||||||| |||||||| || ||||| |||||||||||||||||||||||
Sbjct: 193 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 252
Query: 215 gcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtgaagcag 274
||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||
Sbjct: 253 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 312
Query: 275 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 334
|||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 313 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 372
Query: 335 attatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 394
|| ||||| ||||| || ||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 373 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 432
Query: 395 gccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgac 454
|||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||| ||
Sbjct: 433 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggat 492
Query: 455 aagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatc 514
||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 493 aagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 552
Query: 515 ttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttccttgca 574
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 553 ctgacccacaacagcaagggcatcaactaccagatcctgtccaacccggagttcctcgcc 612
Query: 575 gagggcactgctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggag 634
||||||||||| || || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 613 gagggcactgcgatcgacgacctgttcaagcccgacagagtgctcatcggtggccgggag 672
Query: 635 acccccgagggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggttccc 694
||||||||||||||||| |||||| ||||||||||| |||||||| |||||||| ||
Sbjct: 673 acccccgagggcaggaaggccgtcgaggctctcaagtcggtgtacgcccactgggtgccn 732
Query: 695 gaggacaggatcctcaccaccaacctgtggtctgctgagctctccaagctcgctgccaac 754
|| | ||| |||||||||||||||||||||| ||||||||||||||||| | ||||
Sbjct: 733 cgagagaacatcatcaccaccaacctgtggtctgccgagctctccaagctcgccgncaac 792
Query: 755 gcgttcctggcacagaggatctcctctgtgaacgcc 790
|| || ||||| ||||||||||| || |||||||||
Sbjct: 793 gcctttctggcccagaggatctcgtccgtgaacgcc 828
>gb|BJ463720.1|BJ463720 BJ463720 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30d14 5', mRNA sequence
Length = 531
Score = 777 bits (392), Expect = 0.0
Identities = 476/504 (94%)
Strand = Plus / Plus
Query: 869 cccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggacatcctg 928
|||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||
Sbjct: 23 cccaagttcctgaacgccagcgtcgggttcggcgggtcgtgcttccagaaggacatcctg 82
Query: 929 aacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactggaagcag 988
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 83 aacctggtgtacatctgcgagtgcaacggcctgccggaggtggccaactactggaagcag 142
Query: 989 gtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatg 1048
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 143 gtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtggtgtcgtccatg 202
Query: 1049 ttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacacc 1108
||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 203 ttcaacaccgtgtccggcaagaagatcgccgtgctcgggttcgccttcaagaaggatacc 262
Query: 1109 ggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcc 1168
||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 263 ggcgacacccgggagaccccggccatcgacgtgtgcaagggcctgctgggcgacaaggcc 322
Query: 1169 cagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctggccatg 1228
||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 323 caggtgagcatctacgacccccaggtgacggaggaccagatccagcgcgacctggccatg 382
Query: 1229 aacaagttcgactgggaccacccgatgcacctgcagccgacgagcccgacggccgtgaag 1288
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 383 aacaagttcgactgggaccacccgatgcacctgcagccgacgagccccacggccgtgaag 442
Query: 1289 caggtgagctgcgtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatc 1348
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 443 caggtgagcgtggtgtgggacgcgtacgaggccaccaagggcgcccacgccgtgtgcatc 502
Query: 1349 ctgaccgagtgggacgagttcaag 1372
|| ||||||||| |||||||||||
Sbjct: 503 ctcaccgagtggaacgagttcaag 526
>gb|CA018721.1|CA018721 HV09H09r HV Hordeum vulgare subsp. vulgare cDNA clone HV09H09
5-PRIME, mRNA sequence
Length = 620
Score = 775 bits (391), Expect = 0.0
Identities = 553/607 (91%)
Strand = Plus / Plus
Query: 511 gatcttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttcct 570
|||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 11 gatcctgacccacaacagcaagggcatcaactaccagatcctgtccaacccggagttcct 70
Query: 571 tgcagagggcactgctattgaggacctgttcaagcctgacagagtgctcatcggtggccg 630
|| ||||||||||| || || |||||||||||||| |||||||||||||||||||||||
Sbjct: 71 cgccgagggcactgcgatcgacgacctgttcaagcccgacagagtgctcatcggtggccg 130
Query: 631 ggagacccccgagggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggt 690
||||||||||||||||||||| |||||| ||||||||||| |||||||| ||||||||
Sbjct: 131 ggagacccccgagggcaggaaggccgtcgaggctctcaagtcggtgtacgcccactgggt 190
Query: 691 tcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaagctcgctgc 750
|||||||| | ||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 191 gcccgaggagaacatcatcaccaccaacctgtggtctgccgagctctccaagctcgccgc 250
Query: 751 caacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctctgcgaggc 810
|||||| |||||||| ||||||||||| || ||||||||||| || || || ||||||||
Sbjct: 251 caacgccttcctggcccagaggatctcgtccgtgaacgccatgtcggcgctgtgcgaggc 310
Query: 811 caccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgaggattggccc 870
||| ||||| || ||| | |||||| | |||||| | ||||||||| ||||||| || ||
Sbjct: 311 cacgggcgccaacgtgtcggaggtgtcgtacgccatcggcaaggactcgaggatcggtcc 370
Query: 871 caagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaa 930
|||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||
Sbjct: 371 caagttcctgaacgccagcgtcgggttcggcgggtcgtgcttccagaaggacatcctgaa 430
Query: 931 cctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggt 990
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 431 cctggtgtacatctgcgagtgcaacggcctgccggaggtggccaactactggaagcaggt 490
Query: 991 gatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgtt 1050
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 491 gatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtggtgtcgtccatgtt 550
Query: 1051 caacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccgg 1110
||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||
Sbjct: 551 caacaccgtgtccggcaagaagatcgccgtgctcgggttcgccttcaagaaggataccgg 610
Query: 1111 cgacacc 1117
|||||||
Sbjct: 611 cgacacc 617
>gb|BF260200.2|BF260200 HVSMEf0021F24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021F24f, mRNA sequence
Length = 822
Score = 773 bits (390), Expect = 0.0
Identities = 589/653 (90%), Gaps = 2/653 (0%)
Strand = Plus / Plus
Query: 885 ccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtacatct 944
|||| ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1 ccagcgttgggttcggcgggtcctgtttccagaaggacatcctgaacctggtgtacatct 60
Query: 945 gcgagtgcaatggcctgcccgaggtggccaactactggaagcaggt-gatcaagatcaac 1003
|||||||||| ||||| ||||||||||||||||||||||||||||| ||| || |||| |
Sbjct: 61 gcgagtgcaacggcctccccgaggtggccaactactggaagcaggtagat-aatatcanc 119
Query: 1004 gactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgcc 1063
||||||||||||||| ||||||||||||| || ||||| |||||||||||||||||| ||
Sbjct: 120 gactaccagaagagcaggttcgtgaaccgtgttgtgtcctccatgttcaacaccgtctcc 179
Query: 1064 ggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccagggag 1123
||||||||| | || |||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 180 ggcaagaaggtggctgtcctcgggttcgccttcaagaaggacaccggtgacaccagggag 239
Query: 1124 accccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctac 1183
|||||||| || | || |||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 240 accccggcaatttacgtgtgcaagggcctgttgggtgacaaggcccaggtcagcatctac 299
Query: 1184 gacccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactgg 1243
|| |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 300 gatccccaggtcaccgaggaccagatccagcgggacctcgccatgaacaagttcgactgg 359
Query: 1244 gaccacccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagctgcgtg 1303
|||||||| ||||||||||||||||||||||| | | ||||||||||||||| |||
Sbjct: 360 gaccacccaatgcacctgcagccgacgagcccatcatctgtgaagcaggtgagcgtggtg 419
Query: 1304 tgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgggac 1363
|||||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||
Sbjct: 420 tgggacgcgtacgaggccaccaagggggcccatgccgtgtgcatcctgaccgagtggaac 479
Query: 1364 gagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttcgtc 1423
||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 480 gagttcaaggagctggactaccagaagatcttcaacaacatgcagaagccggccttcgtc 539
Query: 1424 ttcgacggccgcaacatcgtcgactccgagaagctgagggagatcggcttcatcgtctac 1483
|||||||| |||||| ||||| || |||| |||| |||||||| |||||||| ||||||
Sbjct: 540 ttcgacgggcgcaacgtcgtcaacgccgactagctcagggagattggcttcattgtctac 599
Query: 1484 tccatcggcaagccgctcgacgcctggctcaaggacatgcccgcggtcgccta 1536
||||||||| |||||||||| || ||||||||||||||||||||| |||||||
Sbjct: 600 tccatcggccagccgctcgatgcgtggctcaaggacatgcccgcgatcgccta 652
>gb|BM816266.1|BM816266 HC01H12_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC01H12_T3.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 756
Score = 773 bits (390), Expect = 0.0
Identities = 489/522 (93%)
Strand = Plus / Plus
Query: 1017 gccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccggcaagaagatcg 1076
||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gccggttcgtgaaccgcgtggtgtcgtccatgttcaacaccgtgtccggcaagaagatcg 60
Query: 1077 ccgtcctcggcttcgccttcaagaaggacaccggcgacaccagggagaccccggccatcg 1136
|||| ||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 61 ccgtgctcgggttcgccttcaagaaggataccggcgacacccgggagaccccggccatcg 120
Query: 1137 atgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacgacccccaggtga 1196
| || ||||||||||||||||| |||||||||||| | |||||||||||||| |||||||
Sbjct: 121 acgtgtgcaagggcctgctgggcgacaaggcccaggtgagcatctacgacccgcaggtga 180
Query: 1197 cggaggaccagatccagcgggacctggccatgaacaagttcgactgggaccacccgatgc 1256
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggaggaccagatccagcgcgacctggccatgaacaagttcgactgggaccacccgatgc 240
Query: 1257 acctgcagccgacgagcccgacggccgtgaagcaggtgagctgcgtgtgggacgcgtacg 1316
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 acctgcagccgacgagccccacggccgtgaagcaggtgagcgtggtgtgggacgcgtacg 300
Query: 1317 aggccaccaagggcgcccacgggctgtgcatcctgaccgagtgggacgagttcaagaccc 1376
||||||||||||||||||||| |||||||||| ||||||||| ||||||||||| | |
Sbjct: 301 aggccaccaagggcgcccacgccgtgtgcatcctcaccgagtggaacgagttcaagtcgc 360
Query: 1377 tggactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgca 1436
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 361 tggactacaagaagatcttcgacaacatgcagaagccggccttcgtcttcgacggccgca 420
Query: 1437 acatcgtcgactccgagaagctgagggagatcggcttcatcgtctactccatcggcaagc 1496
|| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 421 acgtcgtcgacgccgagaagctcagggagatcggcttcatcgtctactccatcggcaagc 480
Query: 1497 cgctcgacgcctggctcaaggacatgcccgcggtcgcctaat 1538
||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 481 cgctcgacgggtggctcaaggacatgcccgccgtcgcctaat 522
>gb|BQ768396.1|BQ768396 EBro08_SQ011_H16_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_H16 5', mRNA sequence
Length = 596
Score = 753 bits (380), Expect = 0.0
Identities = 539/592 (91%)
Strand = Plus / Plus
Query: 828 ctgaggtggcttacgccgtgggcaaggacacgaggattggccccaagttcctgaacgcca 887
|||||||| |||||||| | ||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 5 ctgaggtgtcttacgccatcggcaaggactccaggatcggccccaagttcctgaacgcca 64
Query: 888 gtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtacatctgcg 947
| ||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 65 gcgttgggttcggcgggtcctgtttccagaaggacatcctgaacctggtgtacatctgcg 124
Query: 948 agtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaagatcaacgact 1007
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 agtgcaacggcctccccgaggtggccaactactggaagcaggtgatcaagatcaacgact 184
Query: 1008 accagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccggca 1067
||||||||||| ||||||||||||| || ||||| |||||||||||||||||| ||||||
Sbjct: 185 accagaagagcaggttcgtgaaccgtgttgtgtcctccatgttcaacaccgtctccggca 244
Query: 1068 agaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccagggagaccc 1127
||||| | || |||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 245 agaaggtggctgtcctcgggttcgccttcaagaaggacaccggtgacaccagggagaccc 304
Query: 1128 cggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacgacc 1187
|||| || || || |||||||||||| ||||||||||||||||| ||||||||||||| |
Sbjct: 305 cggcaattgacgtgtgcaagggcctgttgggtgacaaggcccaggtcagcatctacgatc 364
Query: 1188 cccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactgggacc 1247
||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 365 cccaggtcaccgaggaccagatccagcgggacctcgccatgaacaagttcgactgggacc 424
Query: 1248 acccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagctgcgtgtggg 1307
|||| ||||||||||||||||||||||| | | |||||||| |||||| |||||||
Sbjct: 425 acccaatgcacctgcagccgacgagcccatcatctgtgaagcaagtgagcgtggtgtggg 484
Query: 1308 acgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgggacgagt 1367
|||||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||
Sbjct: 485 acgcgtacgaggccaccaagggggcccatgccgtgtgcatcctgaccgagtggaacgagt 544
Query: 1368 tcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgcctt 1419
||||| ||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 545 tcaaggagctggactaccagaagatcttcaacaacatgcagaagccggcctt 596
>gb|BI958959.1|BI958959 HVSMEn0017G17f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0017G17f,
mRNA sequence
Length = 633
Score = 751 bits (379), Expect = 0.0
Identities = 544/599 (90%)
Strand = Plus / Plus
Query: 938 tacatctgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaag 997
|||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacatctgggagtgcaacggcctccccgaggtggccaactactggaagcaggtgatcaag 60
Query: 998 atcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacacc 1057
||||||||||||||||||||| ||||||||||||| || ||||| |||||||||||||||
Sbjct: 61 atcaacgactaccagaagagcaggttcgtgaaccgtgttgtgtcctccatgttcaacacc 120
Query: 1058 gtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacacc 1117
||| ||||||||||| | || |||||||| |||||||||||||||| |||||| ||||||
Sbjct: 121 gtctccggcaagaaggtggctgtcctcgggttcgccttcaagaagggcaccggtgacacc 180
Query: 1118 agggagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagc 1177
|||||||||||||| || || || |||||||||||| ||||||||||||||||| |||||
Sbjct: 181 agggagaccccggcaattgacgtgtgcaagggcctgttgggtgacaaggcccaggtcagc 240
Query: 1178 atctacgacccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttc 1237
|||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 atctacgatccccaggtcaccgaggaccagatccagcgggacctcgccatgaacaagttc 300
Query: 1238 gactgggaccacccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagc 1297
|||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 301 gactgggaccacccaatgcacctgcagccgacgagcccatcatctgtgaagcaggtgagc 360
Query: 1298 tgcgtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgag 1357
||||||||||||||||||||||||||||| ||||| | |||||||||||||||||
Sbjct: 361 gtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgcatcctgaccgag 420
Query: 1358 tgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgcc 1417
||| ||||||||||| ||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 421 tggaacgagttcaaggagctggactaccagaagatcttcaacaacatgcagaagccggcc 480
Query: 1418 ttcgtcttcgacggccgcaacatcgtcgactccgagaagctgagggagatcggcttcatc 1477
|||||||||||||| |||||| ||||| || |||| ||||| |||||||| ||||||||
Sbjct: 481 ttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggagattggcttcatt 540
Query: 1478 gtctactccatcggcaagccgctcgacgcctggctcaaggacatgcccgcggtcgccta 1536
|||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||
Sbjct: 541 gtctactccatcggcaagccgctcgatgcgtggctcaaggacatgcccgcgatcgccta 599
>gb|BQ762919.1|BQ762919 EBro02_SQ006_D18_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_D18 5', mRNA sequence
Length = 519
Score = 745 bits (376), Expect = 0.0
Identities = 488/520 (93%), Gaps = 4/520 (0%)
Strand = Plus / Plus
Query: 902 gggtcttgcttccagaaggacatcctgaacctggtgtacatctgcgagtgcaatggcctg 961
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3 gggtcgtgcttccagaaggacatcctgaacctggtgtacatctgcgagtgcaacggcctg 62
Query: 962 cccgaggtggccaactactggaagcaggtgatcaagatcaacgactaccagaagagccgg 1021
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ccggaggtggccaactactggaagcaggtgatcaagatcaacgactaccagaagagccgg 122
Query: 1022 ttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccggcaagaagatcgccgtc 1081
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 123 ttcgtgaaccgcgtggtgtcgtccatgttcaacaccgtgtccggcaagaagatcgccgtg 182
Query: 1082 ctcggcttcgccttcaagaaggacaccggcgacaccagggagaccccggccatcgatgtc 1141
||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||| ||
Sbjct: 183 ctcgggttcgccttcaagaaggataccggcgacacccgggagaccccggccatcgacgtg 242
Query: 1142 tgcaagggcctgctgggtgacaaggcccagatcagcatctacgacccccaggtgacggag 1201
||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||
Sbjct: 243 tgcaagggcctgctgggcgacaaggcccaggtgagcatctacgacccccaggtgacggag 302
Query: 1202 gaccagatccagcgggacctggccatgaacaagttcgactgggaccacccgatgcacctg 1261
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gaccagatccagcgcgacctggccatgaacaagttcgactgggaccacccgatgcacctg 362
Query: 1262 cagccgacgagcccgacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgaggcc 1321
|||||||||||||| |||||||||||||| |||| || |||||||||||||||||||||
Sbjct: 363 cagccgacgagccccacggccgtgaagca-gtgacgtg-gtgtgggacgcgtacgaggcc 420
Query: 1322 accaaggg-cgcccacgggctgtgcatcctgaccgagtgggacgagttcaagaccctgga 1380
|||||||| |||||||| |||||||||| ||||||||| ||||||||||| | |||||
Sbjct: 421 accaagggncgcccacgccgtgtgcatcctcaccgagtggaacgagttcaagtcgctgga 480
Query: 1381 ctaccagaagatcttcgacaacatgcagaagcccgccttc 1420
| || |||||||||||||||||||||||||||| ||||||
Sbjct: 481 c-acaagaagatcttcgacaacatgcagaagccggccttc 519
>gb|BM370810.2|BM370810 EBro04_SQ002_F16_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_F16 5', mRNA sequence
Length = 490
Score = 741 bits (374), Expect = 0.0
Identities = 461/490 (94%)
Strand = Plus / Plus
Query: 1000 caacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgt 1059
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 caacgactaccagaagagccggttcgtgaaccgcgtggtgtcgtccatgttcaacaccgt 60
Query: 1060 cgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccag 1119
||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |
Sbjct: 61 gtccggcaagaagatcgccgtgctcgggttcgccttcaagaaggataccggcgacacccg 120
Query: 1120 ggagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcat 1179
|||||||||||||||||| || ||||||||||||||||| |||||||||||| | |||||
Sbjct: 121 ggagaccccggccatcgacgtgtgcaagggcctgctgggcgacaaggcccaggtgagcat 180
Query: 1180 ctacgacccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcga 1239
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 181 ctacgacccccaggtgacggaggaccagatccagcgcgacctggccatgaacaagttcga 240
Query: 1240 ctgggaccacccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagctg 1299
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 ctgggaccacccgatgcacctgcagccgacgagccccacggccgtgaagcaggtgagcgt 300
Query: 1300 cgtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtg 1359
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 301 ggtgtgggacgcgtacgaggccaccaagggcgcccacgccgtgtgcatcctcaccgagtg 360
Query: 1360 ggacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgcctt 1419
| ||||||||||| | ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 361 gaacgagttcaagtcgctggactacaagaagatcttcgacaacatgcagaagccggcctt 420
Query: 1420 cgtcttcgacggccgcaacatcgtcgactccgagaagctgagggagatcggcttcatcgt 1479
||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||
Sbjct: 421 cgtcttcgacggccgcaacgtcgtcgacgccgagaagctcagggagatcggcttcatcgt 480
Query: 1480 ctactccatc 1489
||||||||||
Sbjct: 481 ctactccatc 490
>gb|AV916910.1|AV916910 AV916910 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20a23 5', mRNA sequence
Length = 581
Score = 729 bits (368), Expect = 0.0
Identities = 518/568 (91%)
Strand = Plus / Plus
Query: 768 agaggatctcctctgtgaacgccatctccgccctctgcgaggccaccggcgcgaatgtga 827
||||||||||||||||||| ||||| ||||| ||||||||||| ||||| || || |||
Sbjct: 2 agaggatctcctctgtgaatgccatgtccgcgctctgcgaggctaccggtgctaacgtgt 61
Query: 828 ctgaggtggcttacgccgtgggcaaggacacgaggattggccccaagttcctgaacgcca 887
|||||||| |||||||| | ||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 62 ctgaggtgtcttacgccatcggcaaggactccaggatcggccccaagttcctgaacgcca 121
Query: 888 gtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtacatctgcg 947
| ||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcgttgggttcggcgggtcctgtttccagaaggacatcctgaacctggtgtacatctgcg 181
Query: 948 agtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaagatcaacgact 1007
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agtgcaacggcctccccgaggtggccaactactggaagcaggtgatcaagatcaacgact 241
Query: 1008 accagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccggca 1067
||||||||||| ||||||||||||| || ||||| |||||||||||||||||| ||||||
Sbjct: 242 accagaagagcaggttcgtgaaccgtgttgtgtcctccatgttcaacaccgtctccggca 301
Query: 1068 agaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccagggagaccc 1127
||||| | || |||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 302 agaaggtggctgtcctcgggttcgccttcaagaaggacaccggtgacaccagggagaccc 361
Query: 1128 cggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacgacc 1187
|||| || || || |||||||||||| ||||||||||||||||| ||||||||||||| |
Sbjct: 362 cggcaattgacgtgtgcaagggcctgttgggtgacaaggcccaggtcagcatctacgatc 421
Query: 1188 cccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactgggacc 1247
||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 cccaggtcaccgaggaccagatccagcgggacctcgccatgaacaagttcgactgggacc 481
Query: 1248 acccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagctgcgtgtggg 1307
|||| ||||||||||||||||||||||| | | ||||||||||||||| |||||||
Sbjct: 482 acccaatgcacctgcagccgacgagcccatcatctgtgaagcaggtgagcgtggtgtggg 541
Query: 1308 acgcgtacgaggccaccaagggcgccca 1335
|||||||||||||||||||||| |||||
Sbjct: 542 acgcgtacgaggccaccaagggggccca 569
>gb|BI959762.1|BI959762 HVSMEn0021F08f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0021F08f,
mRNA sequence
Length = 644
Score = 728 bits (367), Expect = 0.0
Identities = 541/599 (90%)
Strand = Plus / Plus
Query: 938 tacatctgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaag 997
|||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacatctgcgagggcggcggcctccccgaggtggccaactactggaagcaggtgatcaag 60
Query: 998 atcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacacc 1057
||||||||||||||||||||| ||||||||||||| || ||||| |||||||||||||||
Sbjct: 61 atcaacgactaccagaagagcaggttcgtgaaccgtgttgtgtcctccatgttcaacacc 120
Query: 1058 gtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacacc 1117
||| ||||||||||| | || |||||||| |||||||||||||||| | |||| ||||||
Sbjct: 121 gtctccggcaagaaggtggctgtcctcgggttcgccttcaagaagggcgccggtgacacc 180
Query: 1118 agggagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagc 1177
|||||||||||||| || || || |||||||||||| ||||||||||||||||| |||||
Sbjct: 181 agggagaccccggcaattgacgtgtgcaagggcctgttgggtgacaaggcccaggtcagc 240
Query: 1178 atctacgacccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttc 1237
|||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 atctacgatccccaggtcaccgaggaccagatccagcgggacctcgccatgaacaagttc 300
Query: 1238 gactgggaccacccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagc 1297
|||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 301 gactgggaccacccaatgcacctgcagccgacgagcccatcatctgtgaagcaggtgagc 360
Query: 1298 tgcgtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgag 1357
||||||||||||||||||||||||||||| ||||| | |||||||||||||||||
Sbjct: 361 gtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgcatcctgaccgag 420
Query: 1358 tgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgcc 1417
||| ||||||||||| ||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 421 tggaacgagttcaaggagctggactaccagaagatcttcaacaacatgcagaagccggcc 480
Query: 1418 ttcgtcttcgacggccgcaacatcgtcgactccgagaagctgagggagatcggcttcatc 1477
|||||||||||||| |||||| ||||| || |||| ||||| |||||||| ||||||||
Sbjct: 481 ttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggagattggcttcatt 540
Query: 1478 gtctactccatcggcaagccgctcgacgcctggctcaaggacatgcccgcggtcgccta 1536
|||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||
Sbjct: 541 gtctactccatcggcaagccgctcgatgcgtggctcaaggacatgcccgcgatcgccta 599
>gb|BJ464404.1|BJ464404 BJ464404 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34c20 5', mRNA sequence
Length = 603
Score = 724 bits (365), Expect = 0.0
Identities = 537/593 (90%), Gaps = 1/593 (0%)
Strand = Plus / Plus
Query: 602 aagcctgacagagtgctcatcggtggccgggagacccccgagggcaggaaagccgtccag 661
||||||||||| || || |||||||| |||||||||||||||| |||||| || || |||
Sbjct: 5 aagcctgacagggtacttatcggtggtcgggagacccccgagg-caggaaggcggttcag 63
Query: 662 gctctcaaggatgtgtacgctcactgggttcccgaggacaggatcctcaccaccaacctg 721
||||||||||| |||||||| |||||||||| ||||| | ||| ||||||||||||||
Sbjct: 64 gctctcaaggaggtgtacgccaactgggttcctgaggagaacatcatcaccaccaacctg 123
Query: 722 tggtctgctgagctctccaagctcgctgccaacgcgttcctggcacagaggatctcctct 781
|||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||
Sbjct: 124 tggtctgctgagctctccaagctcgctgccaatgcgttcttggcccagaggatctcctct 183
Query: 782 gtgaacgccatctccgccctctgcgaggccaccggcgcgaatgtgactgaggtggcttac 841
||||| ||||| ||||| ||||||||||| ||||| || || ||| |||||||| |||||
Sbjct: 184 gtgaatgccatgtccgcgctctgcgaggctaccggtgctaacgtgtctgaggtgtcttac 243
Query: 842 gccgtgggcaaggacacgaggattggccccaagttcctgaacgccagtgttgggttcggt 901
||| | ||||||||| | ||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 244 gccatcggcaaggactccaggatcggccccaagttcctgaacgccagcgttgggttcggc 303
Query: 902 gggtcttgcttccagaaggacatcctgaacctggtgtacatctgcgagtgcaatggcctg 961
||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 304 gggtcctgtttccagaaggacatcctgaacctggtgtacatctgcgagtgcaacggcctc 363
Query: 962 cccgaggtggccaactactggaagcaggtgatcaagatcaacgactaccagaagagccgg 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 364 cccgaggtggccaactactggaagcaggtgatcaagatcaacgactaccagaagagcagg 423
Query: 1022 ttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccggcaagaagatcgccgtc 1081
||||||||||| || ||||| |||||||||||||||||| ||||||||||| | || |||
Sbjct: 424 ttcgtgaaccgtgttgtgtcctccatgttcaacaccgtctccggcaagaaggtggctgtc 483
Query: 1082 ctcggcttcgccttcaagaaggacaccggcgacaccagggagaccccggccatcgatgtc 1141
||||| ||||||||||||||||||||||| |||||||||||||||||||| || || ||
Sbjct: 484 ctcgggttcgccttcaagaaggacaccggtgacaccagggagaccccggcaattgacgtg 543
Query: 1142 tgcaagggcctgctgggtgacaaggcccagatcagcatctacgacccccaggt 1194
|||||||||||| ||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 544 tgcaagggcctgttgggtgacaaggcccaggtcagcatctacgatccccaggt 596
>gb|BQ768330.1|BQ768330 EBro08_SQ011_L11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_L11 5', mRNA sequence
Length = 570
Score = 724 bits (365), Expect = 0.0
Identities = 475/509 (93%), Gaps = 2/509 (0%)
Strand = Plus / Plus
Query: 1030 ccgcgtcgtgtcgtccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggctt 1089
|||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||
Sbjct: 1 ccgcgtggtgtcgtccatgttcaacaccgtgtccggcaagaagatcgccgtgctcgggtt 60
Query: 1090 cgccttcaagaaggacaccggcgacaccagggagaccccggccatcgatgtctgcaaggg 1149
| ||||||||| ||| |||||||||||| ||||||||||||||||||| || ||||||||
Sbjct: 61 c-ccttcaaga-ggataccggcgacacccgggagaccccggccatcgacgtgtgcaaggg 118
Query: 1150 cctgctgggtgacaaggcccagatcagcatctacgacccccaggtgacggaggaccagat 1209
||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 119 cctgctgggcgacaaggcccaggtgagcatctacgacccccaggtgacggaggaccagat 178
Query: 1210 ccagcgggacctggccatgaacaagttcgactgggaccacccgatgcacctgcagccgac 1269
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ccagcgcgacctggccatgaacaagttcgactgggaccacccgatgcacctgcagccgac 238
Query: 1270 gagcccgacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgaggccaccaaggg 1329
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 239 gagccccacggccgtgaagcaggtgagcgtggtgtgggacgcgtacgaggccaccaaggg 298
Query: 1330 cgcccacgggctgtgcatcctgaccgagtgggacgagttcaagaccctggactaccagaa 1389
|||||||| |||||||||| ||||||||| ||||||||||| | ||||||||| ||||
Sbjct: 299 cgcccacgccgtgtgcatcctcaccgagtggaacgagttcaagtcgctggactacaagaa 358
Query: 1390 gatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaacatcgtcgactc 1449
|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |
Sbjct: 359 gatcttcgacaacatgcagaagccggccttcgtcttcgacggccgcaacgtcgtcgacgc 418
Query: 1450 cgagaagctgagggagatcggcttcatcgtctactccatcggcaagccgctcgacgcctg 1509
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 419 cgagaagctcagggagatcggcttcatcgtctactccatcggcaagccgctcgacgggtg 478
Query: 1510 gctcaaggacatgcccgcggtcgcctaat 1538
|||||||||||||||||| ||||||||||
Sbjct: 479 gctcaaggacatgcccgccgtcgcctaat 507
>gb|BF616987.2|BF616987 HVSMEc0014C22f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0014C22f, mRNA sequence
Length = 765
Score = 720 bits (363), Expect = 0.0
Identities = 582/654 (88%), Gaps = 1/654 (0%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 154
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 99 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccaacaatggctgtcatt 158
Query: 155 gccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgcattgag 214
||| |||||||||||| |||||||| || ||||| |||||||||||||||||||||||
Sbjct: 159 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 218
Query: 215 gcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtgaagcag 274
||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||
Sbjct: 219 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 278
Query: 275 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 334
|||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 279 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 338
Query: 335 attatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 394
|| ||||| ||||| || ||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 339 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 398
Query: 395 gccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgac 454
||||||||||||||||| |||||||| ||||| ||||| || ||||| |||||||| ||
Sbjct: 399 gccgacctcacctactgngagagcgccgcccggatgatcgccgatgtgtccaagtcggat 458
Query: 455 aagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatc 514
||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 459 aagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 518
Query: 515 ttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttccttgca 574
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 519 ctgacccacaacagcaagggcatcaactaccagatcctgtccaacccggagttcctcgcc 578
Query: 575 gagggcactgctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggag 634
||||||||||| || || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 579 gagggcactgcgatcgacgacctgttcaagcccgacagagtgctcatcggtggccgggag 638
Query: 635 acccccgagggcaggaaagccgtccaggctctcaaggatgtgtacg-ctcactgggttcc 693
|||||||||||||||||||||||| ||||||||||| ||||||| | |||||||| ||
Sbjct: 639 acccccgagggcaggaaagccgtcgaggctctcaagtcggtgtacgccccactgggtgcc 698
Query: 694 cgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaagctcgc 747
| |||| || |||||||| ||||||||||||| ||||| | |||||||||
Sbjct: 699 ccaggaggacattatcaccacccacctgtggtctgccgagcttttcaagctcgc 752
>gb|BJ463791.1|BJ463791 BJ463791 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30i06 5', mRNA sequence
Length = 677
Score = 710 bits (358), Expect = 0.0
Identities = 547/610 (89%)
Strand = Plus / Plus
Query: 89 gacaaaatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggcc 148
||||| ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 68 gacaagatggtgaagatctgctgcatcggagctggctatgtcggcggcccaacaatggcc 127
Query: 149 gtcattgccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgc 208
||||||||| |||||||||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 128 gtcattgccgtcaagtgcccagcaattgaggttgttgttgttgacatctccaagcctcgc 187
Query: 209 attgaggcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtg 268
||||| || |||||||| ||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 188 attgacgcttggaacagcgacacactcccaatttacgagcctggcctcgatgaggttgtc 247
Query: 269 aagcagtgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgag 328
||| ||||||||||| ||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 248 aaggcgtgcaggggcaagaacctcttcttcagcactgacgtcgagaagcacgttgctgag 307
Query: 329 gctgacattatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggc 388
|| ||||| ||||| ||||| |||||||||||||||||||||||||| || ||||| |||
Sbjct: 308 gccgacatcatcttcgtctcagtgaacacccccaccaagacccgtggtctgggagccggc 367
Query: 389 aaggctgccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaag 448
|||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 368 aaggctgccgacctcacctactgggagagcgctgcccggatgatcgccgatgtgtccaag 427
Query: 449 tctgacaagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgag 508
|| |||||||| || ||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 428 tccgacaagatcgtcgttgagaagtccactgtccctgtcaagactgcagaggccattgag 487
Query: 509 aagatcttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttc 568
||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 488 aagatcttgactcacaacagcaagggcatcaactaccagatcctctccaacccggagttc 547
Query: 569 cttgcagagggcactgctattgaggacctgttcaagcctgacagagtgctcatcggtggc 628
|| || |||||||| || || || |||||||||||||||||||| || || ||||||||
Sbjct: 548 ctggccgagggcacggccatcgacgacctgttcaagcctgacagggtacttatcggtggt 607
Query: 629 cgggagacccccgagggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgg 688
||||||||||||||||||||||| || || |||||||||||||| |||||||| |||||
Sbjct: 608 cgggagacccccgagggcaggaaggcggttcaggctctcaaggaggtgtacgccaactgg 667
Query: 689 gttcccgagg 698
||||| ||||
Sbjct: 668 gttcctgagg 677
>gb|CB883423.1|CB883423 HQ02D09w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02D09
3-PRIME, mRNA sequence
Length = 582
Score = 702 bits (354), Expect = 0.0
Identities = 524/578 (90%), Gaps = 2/578 (0%)
Strand = Plus / Plus
Query: 519 cccacaacagcaagggcatcaactaccagatcctttccaacccagagttccttgcagagg 578
|||||||||||| |||||||| |||||||||||| |||||||| |||||||| || ||||
Sbjct: 7 cccacaacagca-gggcatca-ctaccagatcctgtccaacccggagttcctcgccgagg 64
Query: 579 gcactgctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggagaccc 638
||||||| || || |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 65 gcactgcgatcgacgacctgttcaagcccgacagagtgctcatcggtggccgggagaccc 124
Query: 639 ccgagggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggttcccgagg 698
||||||||||||| |||||| ||||||||||| |||||||| |||||||| |||||||
Sbjct: 125 ccgagggcaggaaggccgtcgaggctctcaagtcggtgtacgcccactgggtgcccgagg 184
Query: 699 acaggatcctcaccaccaacctgtggtctgctgagctctccaagctcgctgccaacgcgt 758
| | ||| |||||||||||||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 185 agaacatcatcaccaccaacctgtggtctgccgagctctccaagctcgccgccaacgcct 244
Query: 759 tcctggcacagaggatctcctctgtgaacgccatctccgccctctgcgaggccaccggcg 818
||||||| ||||||||||| || ||||||||||| || || || ||||||||||| ||||
Sbjct: 245 tcctggcccagaggatctcgtccgtgaacgccatgtcggcgctgtgcgaggccacgggcg 304
Query: 819 cgaatgtgactgaggtggcttacgccgtgggcaaggacacgaggattggccccaagttcc 878
| || ||| | |||||| | |||||| | ||||||||| ||||||| || ||||||||||
Sbjct: 305 ccaacgtgtcggaggtgtcgtacgccatcggcaaggactcgaggatcggtcccaagttcc 364
Query: 879 tgaacgccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgt 938
|||||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 365 tgaacgccagcgtcgggttcggcgggtcgtgcttccagaaggacatcctgaacctggtgt 424
Query: 939 acatctgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaaga 998
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 425 acatctgcgagtgcaacggcctgccggaggtggccaactactggaagcaggtgatcaaga 484
Query: 999 tcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccg 1058
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 485 tcaacgactaccagaagagccggttcgtgaaccgcgtggtgtcgtccatgttcaacaccg 544
Query: 1059 tcgccggcaagaagatcgccgtcctcggcttcgccttc 1096
| ||||||||||||||||||| ||||| |||||||||
Sbjct: 545 tgtccggcaagaagatcgccgtgctcgggttcgccttc 582
>gb|CV062598.1|CV062598 BNEL80g9 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL80g9 5' similar to putative UDP-glucose
dehydrogenase, mRNA sequence
Length = 700
Score = 694 bits (350), Expect = 0.0
Identities = 622/701 (88%), Gaps = 9/701 (1%)
Strand = Plus / Plus
Query: 563 gagttccttgcagagggcactgctattgaggacctgttcaagcctgacagagtgctcatc 622
|||||||| || |||||||| || || || |||||||||||||||||||| || || |||
Sbjct: 1 gagttcctggccgagggcacggccatcgacgacctgttcaagcctgacagggtacttatc 60
Query: 623 ggtggccgggagacccccgagggcaggaaagccgtccaggctctcaaggatgtgtacgct 682
||||| |||| |||||||||||||||||| || || |||||||||||||| ||||||||
Sbjct: 61 ggtggtcgggggacccccgagggcaggaaggcggttcaggctctcaaggaggtgtacgcc 120
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 aactgggttcctgaggagaacatcatcaccaccaacctgtggtctgctgagctctccaag 180
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
||||||||||| |||||| |||| |||||||||||||||||||| ||||| ||||| |||
Sbjct: 181 ctcgctgccaatgcgttcttggcccagaggatctcctctgtgaatgccatgtccgcgctc 240
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
|||||||| ||||| || || ||| |||||||| |||||||| | ||||||||| | |||
Sbjct: 241 tgcgaggctaccggtgctaacgtgtctgaggtgtcttacgccatcggcaaggactccagg 300
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| ||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 301 atcggccccaagttcctgaacgccagcgttgggttcggcgggtcctgtttccagaaggac 360
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 361 atcctgaacctggtgtacatctgcgagtgcaacggcctccccgaggtggccaactactgg 420
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgt-cgtgtc 1041
|||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||
Sbjct: 421 aagcaggtgatcaagatcaacgactaccagaagagcaggttcgtgaacc-cgtgtgtgtc 479
Query: 1042 gtccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaa 1101
|||||||||||||||||| ||||||||||| | || ||| || ||||||||||||||
Sbjct: 480 ctccatgttcaacaccgtctccggcaagaaggtggctgtcactgggttcgccttcaagaa 539
Query: 1102 ggacaccggcgacaccagggagaccccggccatcgatgtctgcaa-gggcctgctgggtg 1160
||||||||| |||||||||||||||||||| || || || ||||| ||||||| ||||||
Sbjct: 540 ggacaccggtgacaccagggagaccccggcaattgacgtgtgcaaggggcctgttgggtg 599
Query: 1161 acaaggcccagatcagcatc-tacgacccccaggtgacggagg-accagatccagcggg- 1217
|||||| |||| ||||||| ||||| ||||||| || |||| |||||||||||||||
Sbjct: 600 acaagggccaggtcagcatnttacga-tcccaggtcaccgaggaaccagatccagcggga 658
Query: 1218 acct-ggccatgaacaagttcgac-tgggaccacccgatgc 1256
|||| | ||||||||||||||||| ||||||||||| ||||
Sbjct: 659 acctcgcccatgaacaagttcgacttgggaccacccaatgc 699
>gb|BU981848.1|BU981848 HA24N01r HA Hordeum vulgare subsp. vulgare cDNA clone HA24N01
5-PRIME, mRNA sequence
Length = 563
Score = 692 bits (349), Expect = 0.0
Identities = 501/552 (90%)
Strand = Plus / Plus
Query: 634 gacccccgagggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggttcc 693
|||||||||||||||||| || || |||||||||||||| |||||||| ||||||||||
Sbjct: 11 gacccccgagggcaggaaggcggttcaggctctcaaggaggtgtacgccaactgggttcc 70
Query: 694 cgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaagctcgctgccaa 753
||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgaggagaacatcatcaccaccaacctgtggtctgctgagctctccaagctcgctgccaa 130
Query: 754 cgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctctgcgaggccac 813
|||||| |||| |||||||||||||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 131 tgcgttcttggcccagaggatctcctctgtgaatgccatgtccgcgctctgcgaggctac 190
Query: 814 cggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgaggattggccccaa 873
||| || || ||| |||||||| |||||||| | ||||||||| | ||||| ||||||||
Sbjct: 191 cggtgctaacgtgtctgaggtgtcttacgccatcggcaaggactccaggatcggccccaa 250
Query: 874 gttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacct 933
||||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 251 gttcctgaacgccagcgttgggttcggcgggtcctgtttccagaaggacatcctgaacct 310
Query: 934 ggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgat 993
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 311 ggtgtacatctgcgagtgcaacggcctccccgaggtggccaactactggaagcaggtgat 370
Query: 994 caagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaa 1053
||||||||||||||||||||||||| ||||||||||||| || ||||| |||||||||||
Sbjct: 371 caagatcaacgactaccagaagagcaggttcgtgaaccgtgttgtgtcctccatgttcaa 430
Query: 1054 caccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcga 1113
||||||| ||||||||||| | || |||||||| ||||||||||||||||||||||| ||
Sbjct: 431 caccgtctccggcaagaaggtggctgtcctcgggttcgccttcaagaaggacaccggtga 490
Query: 1114 caccagggagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagat 1173
|||||||||||||||||| || || || |||||||||||| || |||||||||||||| |
Sbjct: 491 caccagggagaccccggcaattgacgtgtgcaagggcctgttgngtgacaaggcccaggt 550
Query: 1174 cagcatctacga 1185
||||||||||||
Sbjct: 551 cagcatctacga 562
>gb|BF623132.1|BF623132 HVSMEa0014L04f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0014L04f, mRNA sequence
Length = 830
Score = 684 bits (345), Expect = 0.0
Identities = 445/477 (93%), Gaps = 1/477 (0%)
Strand = Plus / Plus
Query: 1063 cggcaagaagatcgccgtcctcggc-ttcgccttcaagaaggacaccggcgacaccaggg 1121
||||||||||||||||| ||| || ||||||||||||||||| |||||||||||| |||
Sbjct: 3 cggcaagaagatcgccgagctccgcgttcgccttcaagaaggataccggcgacacccggg 62
Query: 1122 agaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatct 1181
|||||||||||||||| || ||||||||||||||||| |||||||||||| | |||||||
Sbjct: 63 agaccccggccatcgacgtgtgcaagggcctgctgggcgacaaggcccaggtgagcatct 122
Query: 1182 acgacccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcgact 1241
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 123 acgacccgcaggtgacggaggaccagatccagcgcgacctggccatgaacaagttcgact 182
Query: 1242 gggaccacccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagctgcg 1301
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 183 gggaccacccgatgcacctgcagccgacgagccccacggccgtgaagcaggtgagcgtgg 242
Query: 1302 tgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtggg 1361
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 243 tgtgggacgcgtacgaggccaccaagggcgcccacgccgtgtgcatcctcaccgagtgga 302
Query: 1362 acgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttcg 1421
||||||||||| | ||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 303 acgagttcaagtcgctggactacaagaagatcttcgacaacatgcagaagccggccttcg 362
Query: 1422 tcttcgacggccgcaacatcgtcgactccgagaagctgagggagatcggcttcatcgtct 1481
||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 363 tcttcgacggccgcaacgtcgtcgacgccgagaagctcagggagatcggcttcatcgtct 422
Query: 1482 actccatcggcaagccgctcgacgcctggctcaaggacatgcccgcggtcgcctaat 1538
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 423 actccatcggcaagccgctcgacgggtggctcaaggacatgcccgccgtcgcctaat 479
>gb|AL505083.1|AL505083 AL505083 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07F10V 5', mRNA sequence
Length = 643
Score = 682 bits (344), Expect = 0.0
Identities = 524/584 (89%)
Strand = Plus / Plus
Query: 89 gacaaaatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggcc 148
||||| ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 54 gacaagatggtgaagatctgctgcatcggagctggctatgtcggcggcccaacaatggcc 113
Query: 149 gtcattgccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgc 208
||||||||| |||||||||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 114 gtcattgccgtcaagtgcccagcaattgaggttgttgttgttgacatctccaagcctcgc 173
Query: 209 attgaggcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtg 268
||||| || |||||||| ||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 174 attgacgcttggaacagcgacacactcccaatttacgagcctggcctcgatgaggttgtc 233
Query: 269 aagcagtgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgag 328
||| ||||||||||| ||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 234 aaggcgtgcaggggcaagaacctcttcttcagcactgacgtcgagaagcacgttgctgag 293
Query: 329 gctgacattatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggc 388
|| ||||| ||||| ||||| |||||||||||||||||||||||||| || ||||| |||
Sbjct: 294 gccgacatcatcttcgtctcagtgaacacccccaccaagacccgtggtctgggagccggc 353
Query: 389 aaggctgccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaag 448
|||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 354 aaggctgccgacctcacctactgggagagcgctgcccggatgatcgccgatgtgtccaag 413
Query: 449 tctgacaagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgag 508
|| |||||||| || ||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 414 tccgacaagatcgtcgttgagaagtccactgtccctgtcaagactgcagaggccattgag 473
Query: 509 aagatcttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttc 568
||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 474 aagatcttgactcacaacagcaagggcatcaactaccagatcctctccaacccggagttc 533
Query: 569 cttgcagagggcactgctattgaggacctgttcaagcctgacagagtgctcatcggtggc 628
|| || |||||||| || || || |||||||||||||||||||| || || ||||||||
Sbjct: 534 ctggccgagggcacggccatcgacgacctgttcaagcctgacagggtacttatcggtggt 593
Query: 629 cgggagacccccgagggcaggaaagccgtccaggctctcaagga 672
||||||||||||||||||||||| || || || |||||||||||
Sbjct: 594 cgggagacccccgagggcaggaaggcggttcaagctctcaagga 637
>gb|CA020731.1|CA020731 HZ37G18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37G18
5-PRIME, mRNA sequence
Length = 592
Score = 682 bits (344), Expect = 0.0
Identities = 521/580 (89%)
Strand = Plus / Plus
Query: 428 atgattgcggatgtctccaagtctgacaagattgttgttgagaagtccactgtccctgtc 487
||||| || ||||| |||||||| |||||||| || || ||||||||||| ||||| |||
Sbjct: 13 atgatcgccgatgtgtccaagtcggacaagatcgtcgtcgagaagtccaccgtccccgtc 72
Query: 488 aagaccgctgaggctattgagaagatcttgacccacaacagcaagggcatcaactaccag 547
|||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 73 aagaccgcagaggccattgagaagatcctgacccacaacagcaagggcatcaactaccag 132
Query: 548 atcctttccaacccagagttccttgcagagggcactgctattgaggacctgttcaagcct 607
||||| |||||||| |||||||| || ||||||||||| || || ||||||||||||||
Sbjct: 133 atcctgtccaacccggagttcctcgccgagggcactgcgatcgacgacctgttcaagccc 192
Query: 608 gacagagtgctcatcggtggccgggagacccccgagggcaggaaagccgtccaggctctc 667
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 193 gacagagtgctcatcggtggccgggagacccccgagggcaggaaggccgtcgaggctctc 252
Query: 668 aaggatgtgtacgctcactgggttcccgaggacaggatcctcaccaccaacctgtggtct 727
||| |||||||| |||||||| |||||||| | ||| ||||||||||||||||||||
Sbjct: 253 aagtcggtgtacgcccactgggtgcccgaggagaacatcatcaccaccaacctgtggtct 312
Query: 728 gctgagctctccaagctcgctgccaacgcgttcctggcacagaggatctcctctgtgaac 787
|| ||||||||||||||||| |||||||| |||||||| ||||||||||| || ||||||
Sbjct: 313 gccgagctctccaagctcgccgccaacgccttcctggcccagaggatctcgtccgtgaac 372
Query: 788 gccatctccgccctctgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtg 847
||||| || || || ||||||||||| ||||| || ||| | |||||| | |||||| |
Sbjct: 373 gccatgtcggcgctgtgcgaggccacgggcgccaacgtgtcggaggtgtcgtacgccatc 432
Query: 848 ggcaaggacacgaggattggccccaagttcctgaacgccagtgttgggttcggtgggtct 907
||||||||| ||||||| || |||||||||||||||||||| || |||||||| |||||
Sbjct: 433 ggcaaggactcgaggatcggtcccaagttcctgaacgccagcgtcgggttcggcgggtcg 492
Query: 908 tgcttccagaaggacatcctgaacctggtgtacatctgcgagtgcaatggcctgcccgag 967
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 493 tgcttccagaaggacatcctgaacctggtgtacatctgcgagtgcaacggcctgccggag 552
Query: 968 gtggccaactactggaagcaggtgatcaagatcaacgact 1007
||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtggccaactactggaagcaggtgatcaagatcaacgact 592
>gb|BE421741.1|BE421741 HWM013cH.04r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM013cH.04, mRNA sequence
Length = 584
Score = 676 bits (341), Expect = 0.0
Identities = 493/544 (90%)
Strand = Plus / Plus
Query: 622 cggtggccgggagacccccgagggcaggaaagccgtccaggctctcaaggatgtgtacgc 681
|||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||
Sbjct: 41 cggtggtcgggagacccccgagggcaggaaggcggttcaggctctcaaggaggtgtacgc 100
Query: 682 tcactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaa 741
|||||||||| ||||| | ||| ||||||||||||||||||||||||||||||||||
Sbjct: 101 caactgggttcctgaggagaacatcatcaccaccaacctgtggtctgctgagctctccaa 160
Query: 742 gctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccct 801
|||||||||||| |||||| |||| |||||||||||||||||||| ||||| ||||| ||
Sbjct: 161 gctcgctgccaatgcgttcttggcccagaggatctcctctgtgaatgccatgtccgcgct 220
Query: 802 ctgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgag 861
||||||||| ||||| || || ||| |||||||| |||||||| | ||||||||| | ||
Sbjct: 221 ctgcgaggctaccggtgctaacgtgtctgaggtgtcttacgccatcggcaaggactccag 280
Query: 862 gattggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaagga 921
||| ||||||||||||||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 281 gatcggccccaagttcctgaacgccagcgttgggttcggcgggtcctgtttccagaagga 340
Query: 922 catcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactg 981
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 341 catcctgaacctggtgtacatctgcgagtgcaacggcctccccgaggtggccaactactg 400
Query: 982 gaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtc 1041
||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||
Sbjct: 401 gaagcaggtgatcaagatcaacgactaccagaagagcaggttcgtgaaccgtgttgtgtc 460
Query: 1042 gtccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaa 1101
|||||||||||||||||| ||||||||||| | || |||||||| ||||||||||||||
Sbjct: 461 ctccatgttcaacaccgtctccggcaagaaggtggctgtcctcgggttcgccttcaagaa 520
Query: 1102 ggacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtga 1161
||||||||| |||||||||||||||||||| || || || |||||||||||| || ||||
Sbjct: 521 ggacaccggtgacaccagggagaccccggcaattgacgtgtgcaagggcctgttgngtga 580
Query: 1162 caag 1165
||||
Sbjct: 581 caag 584
>gb|BI959946.1|BI959946 HVSMEn0022I18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022I18f, mRNA sequence
Length = 657
Score = 670 bits (338), Expect = 0.0
Identities = 502/557 (90%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 154
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 100 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccaacaatggctgtcatt 159
Query: 155 gccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgcattgag 214
||| |||||||||||| || ||||| || ||||| |||||||||||||||||||||||
Sbjct: 160 gccatcaagtgcccagcaatggaggtggtggtcgtcgacatctccaagccccgcattgac 219
Query: 215 gcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtgaagcag 274
||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||
Sbjct: 220 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 279
Query: 275 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 334
|||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 280 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 339
Query: 335 attatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 394
|| ||||| ||||| || ||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 340 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 399
Query: 395 gccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgac 454
|||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||| ||
Sbjct: 400 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggat 459
Query: 455 aagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatc 514
||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 460 aagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 519
Query: 515 ttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttccttgca 574
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 520 ctgacccacaacagcaagggcatcaactaccagatcctgtccaacccggagttcctcgcc 579
Query: 575 gagggcactgctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggag 634
||||||||||| || || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 580 gagggcactgcgatcgacgacctgttcaagcccgacagagtgctcatcggtggccgggag 639
Query: 635 acccccgagggcaggaa 651
||||||||||||| |||
Sbjct: 640 acccccgagggcangaa 656
>gb|BF623994.2|BF623994 HVSMEa0008H04f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0008H04f, mRNA sequence
Length = 510
Score = 660 bits (333), Expect = 0.0
Identities = 459/501 (91%)
Strand = Plus / Plus
Query: 860 aggattggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaag 919
||||| ||||||||||||||||||||||| ||||||||||| ||||| || |||||||||
Sbjct: 6 aggatcggccccaagttcctgaacgccagcgttgggttcggcgggtcctgtttccagaag 65
Query: 920 gacatcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactac 979
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 66 gacatcctgaacctggtgtacatctgcgagtgcaacggcctccccgaggtggccaactac 125
Query: 980 tggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtg 1039
||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||
Sbjct: 126 tggaagcaggtgatcaagatcaacgactaccagaagagcaggttcgtgaaccgtgttgtg 185
Query: 1040 tcgtccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaag 1099
|| |||||||||||||||||| ||||||||||| | || |||||||| ||||||||||||
Sbjct: 186 tcctccatgttcaacaccgtctccggcaagaaggtggctgtcctcgggttcgccttcaag 245
Query: 1100 aaggacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggt 1159
||||||||||| |||||||||||||||||||| || || || |||||||||||| |||||
Sbjct: 246 aaggacaccggtgacaccagggagaccccggcaattgacgtgtgcaagggcctgttgggt 305
Query: 1160 gacaaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggac 1219
|||||||||||| ||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct: 306 gacaaggcccaggtcagcatctacgatccccaggtcaccgaggaccagatccagcgggac 365
Query: 1220 ctggccatgaacaagttcgactgggaccacccgatgcacctgcagccgacgagcccgacg 1279
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 366 ctcgccatgaacaagttcgactgggaccacccaatgcacctgcagccgacgagcccatca 425
Query: 1280 gccgtgaagcaggtgagctgcgtgtgggacgcgtacgaggccaccaagggcgcccacggg 1339
| ||||||||||||||| ||||||||||||||| ||||||||||||| ||||| |
Sbjct: 426 tctgtgaagcaggtgagcgtggtgtgggacgcgtactaggccaccaagggggcccatgcc 485
Query: 1340 ctgtgcatcctgaccgagtgg 1360
||||||||||||||||||||
Sbjct: 486 gtgtgcatcctgaccgagtgg 506
>gb|AV912742.1|AV912742 AV912742 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10b05 5', mRNA sequence
Length = 520
Score = 660 bits (333), Expect = 0.0
Identities = 467/509 (91%), Gaps = 2/509 (0%)
Strand = Plus / Plus
Query: 866 ggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggacatc 925
||||||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 4 ggccccaagttcctgaacgccagcgttgggttcggcgggtcctgtttccagaaggacatc 63
Query: 926 ctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactggaag 985
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 64 ctgaacctggtgtacatctgcgagtgcaacggcctccccgaggtggccaactactggaag 123
Query: 986 caggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtcc 1045
||||||||||||||||||||||||||||||||| ||||||||||||| || ||||| |||
Sbjct: 124 caggtgatcaagatcaacgactaccagaagagcaggttcgtgaaccgtgttgtgtcctcc 183
Query: 1046 atgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggac 1105
||||||||||||||| ||||||||||| | || |||||||| ||||||||||||||||||
Sbjct: 184 atgttcaacaccgtctccggcaagaaggtggctgtcctcgggttcgccttcaagaaggac 243
Query: 1106 accggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgacaag 1165
||||| |||||||||||||||||||| || || || |||||||||||| |||||||||||
Sbjct: 244 accggtgacaccagggagaccccggcaattgacgtgtgcaagggcctgttgggtgacaag 303
Query: 1166 gcccagatc-agcatctacgacccccaggtgacggaggaccagatccagcgggacctggc 1224
|||||| || ||||||||||| |||||||| || ||||||||||||||||||||||| ||
Sbjct: 304 gcccaggtcaagcatctacgatccccaggtcaccgaggaccagatccagcgggacctcgc 363
Query: 1225 catgaacaagttcgactgggaccacccgatgcacctgcagccgacgagcccgacggccgt 1284
||||||||||||||||||||||||||| ||||||||||||||||||||||| | | ||
Sbjct: 364 catgaacaagttcgactgggaccacccaatgcacctgcagccgacgagcccatcatctgt 423
Query: 1285 gaagcaggtgagctgcgtgtgggacgcgtacgaggccaccaagggcgcccacgggc-tgt 1343
||||||||||||| ||||||||||||||||||||||||||||| ||||| | | |||
Sbjct: 424 gaagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgcccgtgt 483
Query: 1344 gcatcctgaccgagtgggacgagttcaag 1372
||||||||||||||||| |||||||||||
Sbjct: 484 gcatcctgaccgagtggaacgagttcaag 512
>gb|AL506436.1|AL506436 AL506436 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03B24T 5',
mRNA sequence
Length = 700
Score = 658 bits (332), Expect = 0.0
Identities = 524/586 (89%), Gaps = 2/586 (0%)
Strand = Plus / Plus
Query: 89 gacaaaatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggcc 148
||||| ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 77 gacaagatggtgaagatctgctgcatcggagctggctatgtcggcggcccaacaatggcc 136
Query: 149 gtcattgccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgc 208
||||||||| |||||||||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 137 gtcattgccgtcaagtgcccagcaattgaggttgttgttgttgacatctccaagcctcgc 196
Query: 209 attgaggcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtg 268
||||| || |||||||| ||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 197 attgacgcttggaacagcgacacactcccaatttacgagcctggcctcgatgaggttgtc 256
Query: 269 aagcagtgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgag 328
||| ||||||||||| ||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 257 aaggcgtgcaggggcaagaacctcttcttcagcactgacgtcgagaagcacgttgctgag 316
Query: 329 gctgacattatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggc 388
|| ||||| ||||| ||||| |||||||||||||||||||||||||| || ||||| |||
Sbjct: 317 gccgacatcatcttcgtctcagtgaacacccccaccaagacccgtggtctgggagccggc 376
Query: 389 aaggctgccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaag 448
|||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 377 aaggctgccgacctcacctactgggagagcgctgcccggatgatcgccgatgtgtccaag 436
Query: 449 tctgacaagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgag 508
|| |||||||| || ||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 437 tccgacaagatcgtcgttgagaagtccactgtccctgtcaagactgcagaggccattgag 496
Query: 509 aagatcttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttc 568
||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 497 aagatcttgactcacaacagcaagggcatcaactaccagatcctctccaacccggagttc 556
Query: 569 cttgcagagggcactgctattgaggacctgttcaagcctgacagagtgctcatcggtggc 628
|| || |||||||| || || || |||||||||||||||||||| || || ||||||||
Sbjct: 557 ctggccgagggcacggccatcgacgacctgttcaagcctgacagggtacttatcggtggt 616
Query: 629 cgggaga-cccccgagggcaggaaagccg-tccaggctctcaagga 672
||| ||| |||||||||||||||| || | | ||||||||||||||
Sbjct: 617 cggnagaccccccgagggcaggaaggcngtttcaggctctcaagga 662
>gb|AV925561.1|AV925561 AV925561 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd24o01 5', mRNA sequence
Length = 652
Score = 642 bits (324), Expect = 0.0
Identities = 483/536 (90%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 154
|||||||||||||||||||||||||||||||| ||||| ||||| || ||||| ||||||
Sbjct: 117 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 176
Query: 155 gccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgcattgag 214
||| |||||||||||| |||||||| || ||||| |||||||||||||||||||||||
Sbjct: 177 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 236
Query: 215 gcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtgaagcag 274
||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||
Sbjct: 237 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 296
Query: 275 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 334
|||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 297 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 356
Query: 335 attatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 394
|| ||||| ||||| || ||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 357 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 416
Query: 395 gccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgac 454
|||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||| |||
Sbjct: 417 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggac 476
Query: 455 aagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatc 514
||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 477 aagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 536
Query: 515 ttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttccttgca 574
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 537 ctgacccacaacagcaagggcatcaactaccagatcctgtccaacccggagttcctcgcc 596
Query: 575 gagggcactgctattgaggacctgttcaagcctgacagagtgctcatcggtggccg 630
||||||||||| || || |||||||||||||| |||||||||||||||||||||||
Sbjct: 597 gagggcactgcgatcgacgacctgttcaagcccgacagagtgctcatcggtggccg 652
>gb|BJ464194.1|BJ464194 BJ464194 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33e10 5', mRNA sequence
Length = 534
Score = 638 bits (322), Expect = 0.0
Identities = 482/534 (90%), Gaps = 1/534 (0%)
Strand = Plus / Plus
Query: 1000 caacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgt 1059
||||||||||| ||||||| ||||||||||||| || ||||| |||||||||||||||||
Sbjct: 2 caacgactacc-gaagagcaggttcgtgaaccgtgttgtgtcctccatgttcaacaccgt 60
Query: 1060 cgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccag 1119
| ||||||||||| | || |||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 61 ctccggcaagaaggtggctgtcctcgggttcgccttcaagaaggacaccggtgacaccag 120
Query: 1120 ggagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcat 1179
|||||||||||| || || || |||||||||||| ||||||||||||||||| |||||||
Sbjct: 121 ggagaccccggcaattgacgtgtgcaagggcctgttgggtgacaaggcccaggtcagcat 180
Query: 1180 ctacgacccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcga 1239
|||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 ctacgatccccaggtcaccgaggaccagatccagcgggacctcgccatgaacaagttcga 240
Query: 1240 ctgggaccacccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagctg 1299
|||||||||||| ||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 241 ctgggaccacccaatgcacctgcagccgacgagcccatcatctgtgaagcaggtgagcgt 300
Query: 1300 cgtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtg 1359
||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||
Sbjct: 301 ggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgcatcctgaccgagtg 360
Query: 1360 ggacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgcctt 1419
| ||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 361 gaacgagttcaaggagctggactaccagaagatcttcaacaacatgcagaagccggcctt 420
Query: 1420 cgtcttcgacggccgcaacatcgtcgactccgagaagctgagggagatcggcttcatcgt 1479
|||||||||||| |||||| ||||| || |||| ||||| |||||||| |||||||| ||
Sbjct: 421 cgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggagattggcttcattgt 480
Query: 1480 ctactccatcggcaagccgctcgacgcctggctcaaggacatgcccgcggtcgc 1533
|||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 481 ctactccatcggcaagccgctcgatgcgtggctcaaggacatgcccgcgatcgc 534
>gb|BQ466912.1|BQ466912 HS01P12T HS Hordeum vulgare subsp. vulgare cDNA clone HS01P12
5-PRIME, mRNA sequence
Length = 659
Score = 638 bits (322), Expect = 0.0
Identities = 478/530 (90%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 154
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 130 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccaacaatggctgtcatt 189
Query: 155 gccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgcattgag 214
||| |||||||||||| |||||||| || ||||| |||||||||||||||||||||||
Sbjct: 190 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 249
Query: 215 gcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtgaagcag 274
||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||
Sbjct: 250 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 309
Query: 275 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 334
|||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 310 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 369
Query: 335 attatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 394
|| ||||| ||||| || ||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 370 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 429
Query: 395 gccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgac 454
|||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||| |||
Sbjct: 430 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggac 489
Query: 455 aagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatc 514
||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 490 aagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 549
Query: 515 ttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttccttgca 574
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 550 ctgacccacaacagcaagggcatcaactaccagatcctgtccaacccggagttcctcgcc 609
Query: 575 gagggcactgctattgaggacctgttcaagcctgacagagtgctcatcgg 624
||||||||||| || || |||||||||||||| |||||||||||||||||
Sbjct: 610 gagggcactgcgatcgacgacctgttcaagcccgacagagtgctcatcgg 659
>gb|BF065332.2|BF065332 HV_CEb0012C09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012C09f, mRNA sequence
Length = 566
Score = 634 bits (320), Expect = e-180
Identities = 485/536 (90%), Gaps = 3/536 (0%)
Strand = Plus / Plus
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| ||||| || ||| | |||||| | |||||| | ||||||||| |||||
Sbjct: 6 tgcgaggccacgggcgccaacgtgtcggaggtgtcgtacgccatcggcaaggactcgagg 65
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || |||||||||||||||||||| || ||||||| ||||| |||||||||||||||
Sbjct: 66 atcggtcccaagttcctgaacgccagcgtccggttcggcgggtcgtgcttccagaaggac 125
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 126 atcctgaacctggtgtacatctgcgagtgcaacggcctgccggaggtggccaactactgg 185
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 186 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtggtgtcg 245
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 246 tccatgttcaacaccgtgtccggcaagaagatcgccgtgctcgggttcgccttcaagaag 305
Query: 1103 gacaccggcgacaccagggag-accccggccatcgatgtctgcaagggcctgctgggtga 1161
|| |||||||||||| ||||| |||||||||||||| || |||||||||||| | || ||
Sbjct: 306 gataccggcgacacccgggagaaccccggccatcgacgtgtgcaagggcctgtttggcga 365
Query: 1162 caaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacct 1221
|| ||||||| | ||| | |||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 366 cagggcccag-tgagcttttacgacccccaggtgacggaagaccaaatccagcgcgacct 424
Query: 1222 ggccatgaacaagttcgactgggaccacccgatgcacctgcagccgacgagcccgacggc 1281
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 425 ggccatgaacaagtt-gactgggaccacccgatgcacctgcagccgacgagcccaacgga 483
Query: 1282 cgtgaagcaggtgagctgcgtgtgggacgcgtacgaggccaccaagggcgcccacg 1337
||||||||| |||||| ||||||||||||| | | |||||||| ||||||||||
Sbjct: 484 cgtgaagcaagtgagcgtggtgtgggacgcgttcaaagccaccaaaggcgcccacg 539
>gb|BI959767.1|BI959767 HVSMEn0021F18f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0021F18f,
mRNA sequence
Length = 647
Score = 634 bits (320), Expect = e-180
Identities = 508/568 (89%), Gaps = 2/568 (0%)
Strand = Plus / Plus
Query: 938 tacatctgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaag 997
|||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacatctgcgagggcaacggcctccccgaggtggccaactactggaagcaggtgatcaag 60
Query: 998 atcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacacc 1057
||||||||||||||||||||| ||||||||||||| || ||||| |||||||||||||||
Sbjct: 61 atcaacgactaccagaagagcaggttcgtgaaccgtgttgtgtcctccatgttcaacacc 120
Query: 1058 gtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggaca-ccggcgacac 1116
||| ||||||||||| | || |||||||| ||||||||||||| || || |||| |||||
Sbjct: 121 gtctccggcaagaaggtggctgtcctcgggttcgccttcaagaggggcagccggtgacac 180
Query: 1117 cagggagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcag 1176
||||||||||||||| || || || |||||||||||| ||||||||||||||||| ||||
Sbjct: 181 cagggagaccccggcaattgacgtgtgcaagggcctgttgggtgacaaggcccaggtcag 240
Query: 1177 catctacgacccccaggtgacggaggaccagatccagcgggacctggccatgaacaagtt 1236
||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 catctacgatccccaggtcaccgaggaccagatccagcgggacctcgccatgaacaagtt 300
Query: 1237 cgactgggaccacccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgag 1296
||||||||||||||| ||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 301 cgactgggaccacccaatgcacctgcagccgacgagcccatcatctgtgaagcaggtgag 360
Query: 1297 ctgcgtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccga 1356
| ||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 361 cgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgcatcctgaccga 420
Query: 1357 gtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgc 1416
|||| ||||||||||| ||||||||||| ||||||||| ||||||||| |||||| ||
Sbjct: 421 gtggaacgagttcaaggagctggactaccataagatcttcaacaacatgccgaagccggc 480
Query: 1417 cttcgtcttcgacggccgcaacatcgtcgactccgagaagctgagggagatcggcttcat 1476
|||||||||| |||| |||||| ||||| || |||| ||||| |||||||| ||||||||
Sbjct: 481 cttcgtcttctacgggcgcaacgtcgtcaacgccgacaagctcagggagattggcttcat 540
Query: 1477 cgtctactccat-cggcaagccgctcga 1503
| ||||||||| | |||||||||||||
Sbjct: 541 tggctactccatcccgcaagccgctcga 568
>gb|CA025152.1|CA025152 HZ51F19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51F19
5-PRIME, mRNA sequence
Length = 597
Score = 622 bits (314), Expect = e-176
Identities = 470/522 (90%)
Strand = Plus / Plus
Query: 89 gacaaaatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggcc 148
||||| ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 76 gacaagatggtgaagatctgctgcatcggagctggctatgtcggcggcccaacaatggcc 135
Query: 149 gtcattgccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgc 208
||||||||| |||||||||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 136 gtcattgccgtcaagtgcccagcaattgaggttgttgttgttgacatctccaagcctcgc 195
Query: 209 attgaggcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtg 268
||||| || |||||||| ||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 196 attgacgcttggaacagcgacacactcccaatttacgagcctggcctcgatgaggttgtc 255
Query: 269 aagcagtgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgag 328
||| ||||||||||| ||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 256 aaggcgtgcaggggcaagaacctcttcttcagcactgacgtcgagaagcacgttgctgag 315
Query: 329 gctgacattatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggc 388
|| ||||| ||||| ||||| |||||||||||||||||||||||||| || ||||| |||
Sbjct: 316 gccgacatcatcttcgtctcagtgaacacccccaccaagacccgtggtctgggagccggc 375
Query: 389 aaggctgccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaag 448
|||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 376 aaggctgccgacctcacctactgggagagcgctgcccggatgatcgccgatgtgtccaag 435
Query: 449 tctgacaagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgag 508
|| |||||||| || ||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 436 tccgacaagatcgtcgttgagaagtccactgtccctgtcaagactgcagaggccattgag 495
Query: 509 aagatcttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttc 568
||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 496 aagatcttgactcacaacagcaagggcatcaactaccagatcctctccaacccggagttc 555
Query: 569 cttgcagagggcactgctattgaggacctgttcaagcctgac 610
|| || |||||||| || || || ||||||||||||||||||
Sbjct: 556 ctggccgagggcacggccatcgacgacctgttcaagcctgac 597
>gb|BQ768409.1|BQ768409 EBro08_SQ011_K14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_K14 5', mRNA sequence
Length = 610
Score = 618 bits (312), Expect = e-175
Identities = 462/512 (90%)
Strand = Plus / Plus
Query: 1025 gtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccggcaagaagatcgccgtcctc 1084
|||||||| || ||||| |||||||||||||||||| ||||||||||| | || ||||||
Sbjct: 1 gtgaaccgtgttgtgtcctccatgttcaacaccgtctccggcaagaaggtggctgtcctc 60
Query: 1085 ggcttcgccttcaagaaggacaccggcgacaccagggagaccccggccatcgatgtctgc 1144
|| ||||||||||||||||||||||| |||||||||||||||||||| || || || |||
Sbjct: 61 gggttcgccttcaagaaggacaccggtgacaccagggagaccccggcaattgacgtgtgc 120
Query: 1145 aagggcctgctgggtgacaaggcccagatcagcatctacgacccccaggtgacggaggac 1204
||||||||| ||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 121 aagggcctgttgggtgacaaggcccaggtcagcatctacgatccccaggtcaccgaggac 180
Query: 1205 cagatccagcgggacctggccatgaacaagttcgactgggaccacccgatgcacctgcag 1264
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 cagatccagcgggacctcgccatgaacaagttcgactgggaccacccaatgcacctgcag 240
Query: 1265 ccgacgagcccgacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgaggccacc 1324
||||||||||| | | ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 241 ccgacgagcccatcatctgtgaagcaggtgagcgtggtgtgggacgcgtacgaggccacc 300
Query: 1325 aagggcgcccacgggctgtgcatcctgaccgagtgggacgagttcaagaccctggactac 1384
||||| ||||| | |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 301 aagggggcccatgccgtgtgcatcctgaccgagtggaacgagttcaaggagctggactac 360
Query: 1385 cagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaacatcgtc 1444
|||||||||||| |||||||||||||||| ||||||||||||||||| |||||| |||||
Sbjct: 361 cagaagatcttcaacaacatgcagaagccggccttcgtcttcgacgggcgcaacgtcgtc 420
Query: 1445 gactccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccgctcgac 1504
|| |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 421 aacgccgacaagctcagggagattggcttcattgtctactccatcggcaagccgctcgat 480
Query: 1505 gcctggctcaaggacatgcccgcggtcgccta 1536
|| ||||||||||||||||||||| |||||||
Sbjct: 481 gcgtggctcaaggacatgcccgcgatcgccta 512
>gb|AL508879.1|AL508879 AL508879 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10B08V 5',
mRNA sequence
Length = 659
Score = 617 bits (311), Expect = e-175
Identities = 499/557 (89%), Gaps = 5/557 (0%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 154
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 94 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccaacaatggctgtcatt 153
Query: 155 gccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgcattgag 214
||| |||||||||||| |||||||| || ||||| |||||||||||||||||||||||
Sbjct: 154 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 213
Query: 215 gcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtgaagcag 274
||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||
Sbjct: 214 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 273
Query: 275 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 334
|||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 274 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 333
Query: 335 attatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 394
|| ||||| ||||| || ||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 334 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 393
Query: 395 gccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgac 454
|||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||| |||
Sbjct: 394 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggac 453
Query: 455 aagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatc 514
||||| || | ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 454 aagatcgtcgncgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 513
Query: 515 ttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttccttgca 574
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 514 ctgacccacaacagcaagggcatcaactaccagatcctgtccaacccggagttcctcgcc 573
Query: 575 gagggcactgctattgaggacctgttcaagcctgacag-agtgc-tcatc-ggtggccgg 631
||||||||||| || || |||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 574 gagggcactgcgatcgacgacctgttcaagcccgacagaagtgcttcatcgggtggccgg 633
Query: 632 g--agacccccgagggc 646
| ||||||||||||||
Sbjct: 634 ggaagacccccgagggc 650
>gb|BF253761.2|BF253761 HVSMEf0002A22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0002A22f, mRNA sequence
Length = 612
Score = 617 bits (311), Expect = e-175
Identities = 495/555 (89%), Gaps = 1/555 (0%)
Strand = Plus / Plus
Query: 885 ccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtacatct 944
|||| ||||||||||| |||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1 ccagcgttgggttcggcgggttctgtttccagaaggacatcctgaacctggtgtacatct 60
Query: 945 gcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaagatcaacg 1004
|||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 61 gcgagtgcaacggcctccccgatgtggccaactactggaagcaggtgatcaatatcaacg 120
Query: 1005 actaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccg 1064
|||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| ||
Sbjct: 121 actaccagaagagcaggttcgtgaaccgtgttgtgtcctccatgttcaacaccgtttgcg 180
Query: 1065 gcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccagggaga 1124
|||||||| | || |||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 181 gcaagaaggtggctgtcctcgggttcgccttcaagaaggacaccggtgacaccagggaga 240
Query: 1125 ccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacg 1184
||||||| || | || |||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 241 ccccggcaatttacgtgtgcaagggcctgttgggtgacaaggcccaggtcagcatctacg 300
Query: 1185 acccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactggg 1244
| |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 atccccaggtcaccgaggaccagatccagcgggacctcgccatgaacaagttcgactggg 360
Query: 1245 accacccgatgcacctgcagccgacgagcccgacggccgtgaagcaggtgagctgcgtgt 1304
||||||| ||||||||||||||||||||||| | | ||||||||||||||| ||||
Sbjct: 361 accacccaatgcacctgcagccgacgagcccatcatctgtgaagcaggtgagcgtggtgt 420
Query: 1305 gggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgggacg 1364
||||||||||||| ||||||||||| ||||| | |||||||||||||||||||| |||
Sbjct: 421 gggacgcgtacgatgccaccaagggggcccatgccgtgtgcatcctgaccgagtggaacg 480
Query: 1365 agttcaagaccctggactaccagaagatcttcgacaacat-gcagaagcccgccttcgtc 1423
||||||| ||||||||||||||||||||| ||||| | ||| ||||| ||||| ||
Sbjct: 481 agttcaatgaactggactaccagaagatcttcaacaacctggcaaaagccggccttgttc 540
Query: 1424 ttcgacggccgcaac 1438
|||||||| ||||||
Sbjct: 541 ttcgacgggcgcaac 555
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 256,666
Number of Sequences: 312970
Number of extensions: 256666
Number of successful extensions: 73544
Number of sequences better than 0.5: 169
Number of HSP's better than 0.5 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73173
Number of HSP's gapped (non-prelim): 265
length of query: 2175
length of database: 175,134,539
effective HSP length: 20
effective length of query: 2155
effective length of database: 168,875,139
effective search space: 363925924545
effective search space used: 363925924545
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)