BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2193041.2.1
(877 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF627260.2|BF627260 HVSMEb0004G03f Hordeum vulgare seedl... 577 e-163
gb|BG418403.2|BG418403 HVSMEk0022J07f Hordeum vulgare testa... 577 e-163
gb|BQ460366.1|BQ460366 HA09O18r HA Hordeum vulgare subsp. v... 577 e-163
gb|BU977345.1|BU977345 HA11E06r HA Hordeum vulgare subsp. v... 577 e-163
gb|CA009098.1|CA009098 HU13C18r HU Hordeum vulgare subsp. v... 577 e-163
gb|BU998242.1|BU998242 HI10G24r HI Hordeum vulgare subsp. v... 571 e-161
gb|CA029760.1|CA029760 HX05C06r HX Hordeum vulgare subsp. v... 571 e-161
gb|CA029893.1|CA029893 HX05I04r HX Hordeum vulgare subsp. v... 571 e-161
gb|CA031805.1|CA031805 HX11C24r HX Hordeum vulgare subsp. v... 571 e-161
gb|CA028584.1|CA028584 HZ62I08r HZ Hordeum vulgare subsp. v... 557 e-157
gb|BU979070.1|BU979070 HA15B06r HA Hordeum vulgare subsp. v... 541 e-152
gb|BU998287.1|BU998287 HI10J07r HI Hordeum vulgare subsp. v... 519 e-146
gb|BQ470360.1|BQ470360 HX02L09r HX Hordeum vulgare subsp. v... 515 e-145
gb|BU990707.1|BU990707 HF25N06r HF Hordeum vulgare subsp. v... 513 e-144
gb|AV913597.1|AV913597 AV913597 K. Sato unpublished cDNA li... 509 e-143
gb|BQ469660.1|BQ469660 HZ01H18r HZ Hordeum vulgare subsp. v... 509 e-143
gb|CA018031.1|CA018031 HV07D06r HV Hordeum vulgare subsp. v... 509 e-143
gb|CK123379.1|CK123379 BES1824103m02 BES1824 Hordeum vulgar... 507 e-142
gb|BQ470577.1|BQ470577 HX03G08r HX Hordeum vulgare subsp. v... 472 e-131
gb|BU979856.1|BU979856 HA17I22r HA Hordeum vulgare subsp. v... 472 e-131
gb|CA025841.1|CA025841 HZ53E20r HZ Hordeum vulgare subsp. v... 472 e-131
gb|BU971281.1|BU971281 HB17C13r BC Hordeum vulgare subsp. v... 470 e-131
gb|BJ452177.1|BJ452177 BJ452177 K. Sato unpublished cDNA li... 458 e-127
gb|BQ469398.1|BQ469398 HM04H19r HM Hordeum vulgare subsp. v... 458 e-127
gb|BM373292.2|BM373292 EBma04_SQ003_N23_R maternal, 10 DPA,... 448 e-124
gb|AV918900.1|AV918900 AV918900 K. Sato unpublished cDNA li... 422 e-117
gb|BG416306.1|BG416306 HVSMEk0011C24f Hordeum vulgare testa... 416 e-115
gb|CA017379.1|CA017379 HV05A14r HV Hordeum vulgare subsp. v... 414 e-114
gb|BQ472232.1|BQ472232 HV04M15r HV Hordeum vulgare subsp. v... 404 e-111
gb|BM097568.2|BM097568 EBem04_SQ002_B04_R embryo, 12 DPA, n... 404 e-111
gb|BF253836.2|BF253836 HVSMEf0002E04f Hordeum vulgare seedl... 377 e-103
gb|CA003637.1|CA003637 HS15B16r HS Hordeum vulgare subsp. v... 375 e-102
gb|BJ459730.1|BJ459730 BJ459730 K. Sato unpublished cDNA li... 373 e-102
gb|CB874518.1|CB874518 HX05I04w HX Hordeum vulgare subsp. v... 363 6e-099
gb|BU971081.1|BU971081 HB16I21r BC Hordeum vulgare subsp. v... 349 1e-094
gb|CA028864.1|CA028864 HZ63H13r HZ Hordeum vulgare subsp. v... 349 1e-094
gb|CV060273.1|CV060273 BNEL56d1 Barley EST endosperm librar... 345 2e-093
gb|BU994700.1|BU994700 HM07O12r HM Hordeum vulgare subsp. v... 341 2e-092
gb|CB880234.1|CB880234 HM05O12w HM Hordeum vulgare subsp. v... 341 2e-092
gb|BQ765813.1|BQ765813 EBro03_SQ008_B09_R root, 3 week, wat... 339 9e-092
gb|CA020678.1|CA020678 HZ37C14r HZ Hordeum vulgare subsp. v... 337 4e-091
gb|CV058145.1|CV058145 BNEL34g9 Barley EST endosperm librar... 329 9e-089
gb|BQ665241.1|BQ665241 HX02L09u HX Hordeum vulgare subsp. v... 319 9e-086
gb|BQ665390.1|BQ665390 HX03G08u HX Hordeum vulgare subsp. v... 317 3e-085
gb|CB876406.1|CB876406 HX11C24w HX Hordeum vulgare subsp. v... 317 3e-085
gb|CV054900.1|CV054900 BNEL114e7 Barley EST endosperm libra... 313 5e-084
gb|CV055276.1|CV055276 BNEL118g4 Barley EST endosperm libra... 313 5e-084
gb|CV059910.1|CV059910 BNEL52c4 Barley EST endosperm librar... 313 5e-084
gb|BQ657044.1|BQ657044 HA09O18u HA Hordeum vulgare subsp. v... 309 8e-083
gb|BQ657440.1|BQ657440 HA08G03u HA Hordeum vulgare subsp. v... 289 8e-077
gb|CV055991.1|CV055991 BNEL12G10 Barley EST endosperm libra... 278 3e-073
gb|CV058582.1|CV058582 BNEL39e8 Barley EST endosperm librar... 278 3e-073
gb|BM369445.2|BM369445 EBem07_SQ003_J16_R embryo, 28 DPA, n... 276 1e-072
gb|BF256931.2|BF256931 HVSMEf0011G13f Hordeum vulgare seedl... 264 4e-069
gb|CV057539.1|CV057539 BNEL29a12 Barley EST endosperm libra... 264 4e-069
gb|BG414786.2|BG414786 HVSMEk0003L13f Hordeum vulgare testa... 260 7e-068
gb|BU977346.1|BU977346 HA11E06u HA Hordeum vulgare subsp. v... 260 7e-068
gb|CB859432.1|CB859432 HI10G24w HI Hordeum vulgare subsp. v... 260 7e-068
gb|CD663736.1|CD663736 UCRHV18_06bh08_b1 Drought-stressed D... 260 7e-068
gb|CV056807.1|CV056807 BNEL20g8 Barley EST endosperm librar... 260 7e-068
gb|CV060168.1|CV060168 BNEL55b7 Barley EST endosperm librar... 260 7e-068
gb|CV058463.1|CV058463 BNEL38c8 Barley EST endosperm librar... 258 3e-067
gb|BQ664765.1|BQ664765 HV04M15u HV Hordeum vulgare subsp. v... 256 1e-066
gb|CB874394.1|CB874394 HX05C06w HX Hordeum vulgare subsp. v... 254 4e-066
gb|AJ461834.1|AJ461834 AJ461834 S00002 Hordeum vulgare subs... 250 7e-065
gb|CV059713.1|CV059713 BNEL50b3 Barley EST endosperm librar... 250 7e-065
gb|CV059589.1|CV059589 BNEL49g5 Barley EST endosperm librar... 242 2e-062
gb|CV061700.1|CV061700 BNEL70h5 Barley EST endosperm librar... 242 2e-062
gb|BF261159.1|BF261159 HVSMEf0023O15f Hordeum vulgare seedl... 238 3e-061
gb|BQ756195.1|BQ756195 EBem05_SQ004_B21_R embryo, 14 DPA, n... 236 1e-060
gb|AV919247.1|AV919247 AV919247 K. Sato unpublished cDNA li... 232 2e-059
gb|BQ661641.1|BQ661641 HM04H19u HM Hordeum vulgare subsp. v... 232 2e-059
gb|AL506939.1|AL506939 AL506939 Hordeum vulgare Barke devel... 230 6e-059
gb|BG343542.1|BG343542 HVSMEg0006F12f Hordeum vulgare pre-a... 230 6e-059
gb|BG343847.1|BG343847 HVSMEg0006O16f Hordeum vulgare pre-a... 230 6e-059
gb|BE602150.2|BE602150 HVSMEh0102M04f Hordeum vulgare 5-45 ... 230 6e-059
gb|BI948222.1|BI948222 HVSMEl0008K16f Hordeum vulgare spike... 230 6e-059
gb|BG344234.2|BG344234 HVSMEg0008E12f Hordeum vulgare pre-a... 230 6e-059
gb|AV914207.1|AV914207 AV914207 K. Sato unpublished cDNA li... 230 6e-059
gb|AV932300.1|AV932300 AV932300 K. Sato unpublished cDNA li... 230 6e-059
gb|AV932301.1|AV932301 AV932301 K. Sato unpublished cDNA li... 230 6e-059
gb|AV933195.1|AV933195 AV933195 K. Sato unpublished cDNA li... 230 6e-059
gb|AV933307.1|AV933307 AV933307 K. Sato unpublished cDNA li... 230 6e-059
gb|AV933357.1|AV933357 AV933357 K. Sato unpublished cDNA li... 230 6e-059
gb|AV934278.1|AV934278 AV934278 K. Sato unpublished cDNA li... 230 6e-059
gb|AV936748.1|AV936748 AV936748 K. Sato unpublished cDNA li... 230 6e-059
gb|BJ454353.1|BJ454353 BJ454353 K. Sato unpublished cDNA li... 230 6e-059
gb|BJ471147.1|BJ471147 BJ471147 K. Sato unpublished cDNA li... 230 6e-059
gb|BQ458700.1|BQ458700 HA04H18r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BQ460477.1|BQ460477 HA09H03r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BQ471559.1|BQ471559 HV02M17r HV Hordeum vulgare subsp. v... 230 6e-059
gb|BI779913.2|BI779913 EBem07_SQ001_J03_R embryo, 28 DPA, n... 230 6e-059
gb|BM099421.2|BM099421 EBes01_SQ003_D07_R embryo sac, 4-6 D... 230 6e-059
gb|BM371894.2|BM371894 EBma08_SQ004_F19_R maternal, 28 DPA,... 230 6e-059
gb|BM442927.2|BM442927 EBro02_SQ001_O04_R root, 3 week, hyd... 230 6e-059
gb|BI778124.2|BI778124 EBro07_SQ002_E18_R root, 3 week, red... 230 6e-059
gb|BI778501.2|BI778501 EBro07_SQ003_H16_R root, 3 week, red... 230 6e-059
gb|BI778592.2|BI778592 EBro07_SQ003_L22_R root, 3 week, red... 230 6e-059
gb|BM370156.2|BM370156 EBro08_SQ003_C16_R root, 3 week, dro... 230 6e-059
gb|BQ763126.1|BQ763126 EBro02_SQ007_E11_R root, 3 week, hyd... 230 6e-059
gb|BQ764842.1|BQ764842 EBca01_SQ005_F02_R carpel, pre-anthe... 230 6e-059
gb|BQ767131.1|BQ767131 EBro08_SQ008_F02_R root, 3 week, dro... 230 6e-059
gb|BQ768758.1|BQ768758 EBro08_SQ012_H18_R root, 3 week, dro... 230 6e-059
gb|BU976772.1|BU976772 HA10E16r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU976861.1|BU976861 HA10H03r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU978046.1|BU978046 HA12H18r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU978459.1|BU978459 HA13E18r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU978754.1|BU978754 HA14C20r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU978921.1|BU978921 HA14K10r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU979192.1|BU979192 HA15G17r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU979485.1|BU979485 HA16F02r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU979767.1|BU979767 HA17D16r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU979960.1|BU979960 HA17P09r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU982329.1|BU982329 HA26D05r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU982839.1|BU982839 HA27M06r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU983328.1|BU983328 HA29F18r HA Hordeum vulgare subsp. v... 230 6e-059
gb|BU989701.1|BU989701 HF22H09r HF Hordeum vulgare subsp. v... 230 6e-059
gb|BU989804.1|BU989804 HF22L23r HF Hordeum vulgare subsp. v... 230 6e-059
gb|BU989855.1|BU989855 HF22O04r HF Hordeum vulgare subsp. v... 230 6e-059
gb|BU995863.1|BU995863 HM11J20r HM Hordeum vulgare subsp. v... 230 6e-059
gb|CA002209.1|CA002209 HS06N09r HS Hordeum vulgare subsp. v... 230 6e-059
gb|CA012061.1|CA012061 HT04F08r HT Hordeum vulgare subsp. v... 230 6e-059
gb|CA013879.1|CA013879 HT09M01r HT Hordeum vulgare subsp. v... 230 6e-059
gb|CA017700.1|CA017700 HV05P11r HV Hordeum vulgare subsp. v... 230 6e-059
gb|CA018350.1|CA018350 HV08F24r HV Hordeum vulgare subsp. v... 230 6e-059
gb|CA019512.1|CA019512 HV12D11r HV Hordeum vulgare subsp. v... 230 6e-059
gb|CA022550.1|CA022550 HZ43J15r HZ Hordeum vulgare subsp. v... 230 6e-059
gb|CA023743.1|CA023743 HZ47E12r HZ Hordeum vulgare subsp. v... 230 6e-059
gb|CA025033.1|CA025033 HZ51A13r HZ Hordeum vulgare subsp. v... 230 6e-059
gb|CA025110.1|CA025110 HZ51D20r HZ Hordeum vulgare subsp. v... 230 6e-059
gb|CA031123.1|CA031123 HX09B09r HX Hordeum vulgare subsp. v... 230 6e-059
gb|CA031784.1|CA031784 HX11C02r HX Hordeum vulgare subsp. v... 230 6e-059
gb|CA032965.1|CA032965 HX14L13r HX Hordeum vulgare subsp. v... 230 6e-059
gb|CV054364.1|CV054364 BNEL109f7 Barley EST endosperm libra... 230 6e-059
gb|CV057277.1|CV057277 BNEL26a2 Barley EST endosperm librar... 230 6e-059
gb|CV057808.1|CV057808 BNEL31a8 Barley EST endosperm librar... 230 6e-059
gb|CV058392.1|CV058392 BNEL37e7 Barley EST endosperm librar... 230 6e-059
gb|CV058568.1|CV058568 BNEL39d6 Barley EST endosperm librar... 230 6e-059
gb|CV058711.1|CV058711 BNEL40a3 Barley EST endosperm librar... 230 6e-059
gb|CV059672.1|CV059672 BNEL4F8 Barley EST endosperm library... 230 6e-059
gb|CV060336.1|CV060336 BNEL57a3 Barley EST endosperm librar... 230 6e-059
gb|CV061335.1|CV061335 BNEL67f4 Barley EST endosperm librar... 230 6e-059
gb|CV062378.1|CV062378 BNEL79d12 Barley EST endosperm libra... 230 6e-059
gb|CK122291.1|CK122291 BES1824102m01 BES1824 Hordeum vulgar... 230 6e-059
gb|CK125500.1|CK125500 BES1824108m14 BES1824 Hordeum vulgar... 230 6e-059
gb|BF254234.3|BF254234 HVSMEf0003G09f Hordeum vulgare seedl... 222 2e-056
gb|BQ764834.1|BQ764834 EBca01_SQ005_D06_R carpel, pre-anthe... 222 2e-056
gb|CV058518.1|CV058518 BNEL38h3 Barley EST endosperm librar... 222 2e-056
gb|BJ449495.1|BJ449495 BJ449495 K. Sato unpublished cDNA li... 220 6e-056
gb|CA013022.1|CA013022 HT07C16r HT Hordeum vulgare subsp. v... 220 6e-056
gb|BQ665894.1|BQ665894 HZ01H18u HZ Hordeum vulgare subsp. v... 214 4e-054
gb|BQ763130.1|BQ763130 EBro02_SQ007_F11_R root, 3 week, hyd... 214 4e-054
gb|BQ459597.1|BQ459597 HA08K13r HA Hordeum vulgare subsp. v... 212 1e-053
gb|BM375743.2|BM375743 EBem06_SQ004_E15_R embryo, 21 DPA, n... 212 1e-053
gb|AV933201.1|AV933201 AV933201 K. Sato unpublished cDNA li... 210 6e-053
gb|CV058133.1|CV058133 BNEL34f8 Barley EST endosperm librar... 208 2e-052
gb|AJ461833.1|AJ461833 AJ461833 S00002 Hordeum vulgare subs... 206 9e-052
gb|BU987960.1|BU987960 HF16E10r HF Hordeum vulgare subsp. v... 206 9e-052
gb|CK125351.1|CK125351 BES1824107m06 BES1824 Hordeum vulgar... 206 9e-052
gb|AJ463558.1|AJ463558 AJ463558 S00002 Hordeum vulgare subs... 202 1e-050
gb|CA017068.1|CA017068 HV05A14u HV Hordeum vulgare subsp. v... 202 1e-050
gb|AJ460241.1|AJ460241 AJ460241 S00002 Hordeum vulgare subs... 194 3e-048
gb|BG417915.1|BG417915 HVSMEk0019P10f Hordeum vulgare testa... 188 2e-046
gb|BF258436.2|BF258436 HVSMEf0015L13f Hordeum vulgare seedl... 186 8e-046
gb|BG299572.1|BG299572 HVSMEa0020N06f Hordeum vulgare seedl... 182 1e-044
gb|CA026081.1|CA026081 HZ54D02r HZ Hordeum vulgare subsp. v... 182 1e-044
gb|CV056528.1|CV056528 BNEL18G7 Barley EST endosperm librar... 178 2e-043
gb|AJ434156.1|AJ434156 AJ434156 S00002 Hordeum vulgare subs... 176 8e-043
gb|BM377349.2|BM377349 EBem05_SQ004_N19_R embryo, 14 DPA, n... 176 8e-043
gb|BI954832.1|BI954832 HVSMEm0019P18f Hordeum vulgare green... 174 3e-042
gb|BJ464279.1|BJ464279 BJ464279 K. Sato unpublished cDNA li... 174 3e-042
gb|BQ135343.1|BQ135343 LP10074 Lemma/palea-enriched cDNA li... 168 2e-040
gb|CV063934.1|CV063934 BNEL94h10 Barley EST endosperm libra... 165 3e-039
gb|AV936754.1|AV936754 AV936754 K. Sato unpublished cDNA li... 161 5e-038
gb|BJ462463.1|BJ462463 BJ462463 K. Sato unpublished cDNA li... 161 5e-038
gb|BQ468214.1|BQ468214 HP01G19T HP Hordeum vulgare subsp. v... 161 5e-038
gb|AL510360.1|AL510360 AL510360 Hordeum vulgare Barke devel... 159 2e-037
gb|AW983358.3|AW983358 HVSMEg0010F13f Hordeum vulgare pre-a... 159 2e-037
gb|AV935143.1|AV935143 AV935143 K. Sato unpublished cDNA li... 159 2e-037
gb|AV935144.1|AV935144 AV935144 K. Sato unpublished cDNA li... 159 2e-037
gb|AV935645.1|AV935645 AV935645 K. Sato unpublished cDNA li... 159 2e-037
gb|AV935750.1|AV935750 AV935750 K. Sato unpublished cDNA li... 159 2e-037
gb|AV935799.1|AV935799 AV935799 K. Sato unpublished cDNA li... 159 2e-037
gb|AV936534.1|AV936534 AV936534 K. Sato unpublished cDNA li... 159 2e-037
gb|AJ436336.1|AJ436336 AJ436336 S00002 Hordeum vulgare subs... 159 2e-037
gb|AJ463448.1|AJ463448 AJ463448 S00002 Hordeum vulgare subs... 159 2e-037
gb|AJ463449.1|AJ463449 AJ463449 S00002 Hordeum vulgare subs... 159 2e-037
gb|AJ463450.1|AJ463450 AJ463450 S00002 Hordeum vulgare subs... 159 2e-037
gb|AJ463452.1|AJ463452 AJ463452 S00002 Hordeum vulgare subs... 159 2e-037
gb|BJ462156.1|BJ462156 BJ462156 K. Sato unpublished cDNA li... 159 2e-037
gb|BJ473776.1|BJ473776 BJ473776 K. Sato unpublished cDNA li... 159 2e-037
gb|BQ464242.1|BQ464242 HF01L18T HF Hordeum vulgare subsp. v... 159 2e-037
gb|BQ656443.1|BQ656443 HA04H18u HA Hordeum vulgare subsp. v... 159 2e-037
gb|BQ658065.1|BQ658065 HA05O07u HA Hordeum vulgare subsp. v... 159 2e-037
gb|BQ664305.1|BQ664305 HV02M17u HV Hordeum vulgare subsp. v... 159 2e-037
gb|BM368095.2|BM368095 EBed01_SQ002_C16_R endosperm, 6 DPA,... 159 2e-037
gb|BQ762867.1|BQ762867 EBro02_SQ006_I10_R root, 3 week, hyd... 159 2e-037
gb|BQ765363.1|BQ765363 EBro03_SQ006_O23_R root, 3 week, wat... 159 2e-037
gb|BU976773.1|BU976773 HA10E16u HA Hordeum vulgare subsp. v... 159 2e-037
gb|BU990491.1|BU990491 HF25D09r HF Hordeum vulgare subsp. v... 159 2e-037
gb|CA000812.1|CA000812 HS06N09u HS Hordeum vulgare subsp. v... 159 2e-037
gb|CA001574.1|CA001574 HS17F10u HS Hordeum vulgare subsp. v... 159 2e-037
gb|CA016531.1|CA016531 HV08F24u HV Hordeum vulgare subsp. v... 159 2e-037
gb|CA026526.1|CA026526 HZ56C18r HZ Hordeum vulgare subsp. v... 159 2e-037
gb|CA026545.1|CA026545 HZ56D14r HZ Hordeum vulgare subsp. v... 159 2e-037
gb|CB875696.1|CB875696 HX09B09w HX Hordeum vulgare subsp. v... 159 2e-037
gb|CB876387.1|CB876387 HX11C02w HX Hordeum vulgare subsp. v... 159 2e-037
gb|CB882016.1|CB882016 HM11J20w HM Hordeum vulgare subsp. v... 159 2e-037
gb|CV054026.1|CV054026 BNEL105h7 Barley EST endosperm libra... 159 2e-037
gb|AL509400.1|AL509400 AL509400 Hordeum vulgare Barke devel... 143 1e-032
gb|BU980097.1|BU980097 HA18J04r HA Hordeum vulgare subsp. v... 143 1e-032
gb|BU985431.1|BU985431 HF07C23r HF Hordeum vulgare subsp. v... 143 1e-032
gb|BU967494.1|BU967494 HB04H05r BC Hordeum vulgare subsp. v... 139 2e-031
gb|BM441407.1|BM441407 EBma05_SQ004_C21_R maternal, 12 DPA,... 137 7e-031
gb|AJ463451.1|AJ463451 AJ463451 S00002 Hordeum vulgare subs... 137 7e-031
gb|BQ657155.1|BQ657155 HA09H03u HA Hordeum vulgare subsp. v... 137 7e-031
gb|AL505846.1|AL505846 AL505846 Hordeum vulgare Barke roots... 131 4e-029
gb|AJ434208.1|AJ434208 AJ434208 S00002 Hordeum vulgare subs... 129 2e-028
gb|BG416508.1|BG416508 HVSMEk0012K12f Hordeum vulgare testa... 127 7e-028
gb|BM097891.2|BM097891 EBpi03_SQ001_P07_R pistil, 4 DPA, no... 127 7e-028
gb|BU978047.1|BU978047 HA12H18u HA Hordeum vulgare subsp. v... 127 7e-028
gb|CK124165.1|CK124165 BES1824107e11 BES1824 Hordeum vulgar... 121 4e-026
gb|AV933035.1|AV933035 AV933035 K. Sato unpublished cDNA li... 117 6e-025
gb|CA015764.1|CA015764 HV12D11u HV Hordeum vulgare subsp. v... 117 6e-025
gb|BQ757628.1|BQ757628 EBem10_SQ004_L15_R embryo, 2 Day ger... 109 2e-022
gb|BJ456936.1|BJ456936 BJ456936 K. Sato unpublished cDNA li... 107 6e-022
gb|BQ661820.1|BQ661820 HP01G19w HP Hordeum vulgare subsp. v... 94 9e-018
gb|AV936755.1|AV936755 AV936755 K. Sato unpublished cDNA li... 88 6e-016
gb|CV062733.1|CV062733 BNEL82d12 Barley EST endosperm libra... 88 6e-016
gb|AV919254.1|AV919254 AV919254 K. Sato unpublished cDNA li... 86 2e-015
gb|AJ463447.1|AJ463447 AJ463447 S00002 Hordeum vulgare subs... 84 9e-015
gb|CB876592.1|CB876592 HX11M07w HX Hordeum vulgare subsp. v... 84 9e-015
gb|BM369591.2|BM369591 EBem07_SQ004_B02_R embryo, 28 DPA, n... 64 8e-009
gb|BQ766559.1|BQ766559 EBro08_SQ006_N12_R root, 3 week, dro... 54 8e-006
gb|BQ767885.1|BQ767885 EBro08_SQ010_I03_R root, 3 week, dro... 48 5e-004
gb|BJ447244.1|BJ447244 BJ447244 K. Sato unpublished cDNA li... 44 0.008
gb|BJ454745.1|BJ454745 BJ454745 K. Sato unpublished cDNA li... 44 0.008
gb|BG343591.2|BG343591 HVSMEg0006H15f Hordeum vulgare pre-a... 40 0.12
gb|BU980351.1|BU980351 HA20H07r HA Hordeum vulgare subsp. v... 40 0.12
gb|BU998020.1|BU998020 HI09M01r HI Hordeum vulgare subsp. v... 40 0.12
gb|CA008290.1|CA008290 HU10H23r HU Hordeum vulgare subsp. v... 40 0.12
gb|BF621248.2|BF621248 HVSMEa0006C24f Hordeum vulgare seedl... 38 0.47
gb|BF624180.2|BF624180 HVSMEa0012H02f Hordeum vulgare seedl... 38 0.47
gb|BE231315.2|BE231315 HVSMEg0019O03f Hordeum vulgare pre-a... 38 0.47
gb|AV916401.1|AV916401 AV916401 K. Sato unpublished cDNA li... 38 0.47
gb|BJ463431.1|BJ463431 BJ463431 K. Sato unpublished cDNA li... 38 0.47
gb|BQ460541.1|BQ460541 HA09D01r HA Hordeum vulgare subsp. v... 38 0.47
gb|BQ466324.1|BQ466324 HT02D11r HT Hordeum vulgare subsp. v... 38 0.47
gb|BQ471528.1|BQ471528 HV02L08r HV Hordeum vulgare subsp. v... 38 0.47
gb|BM441291.2|BM441291 EBed02_SQ002_P07_R endosperm, 8 DPA,... 38 0.47
gb|BM097721.2|BM097721 EBem04_SQ002_I06_R embryo, 12 DPA, n... 38 0.47
gb|BU978664.1|BU978664 HA13O16r HA Hordeum vulgare subsp. v... 38 0.47
gb|CA019978.1|CA019978 HV13P15r HV Hordeum vulgare subsp. v... 38 0.47
gb|CA020210.1|CA020210 HV14K12r HV Hordeum vulgare subsp. v... 38 0.47
gb|CA022851.1|CA022851 HZ44I15r HZ Hordeum vulgare subsp. v... 38 0.47
gb|CV054305.1|CV054305 BNEL109a7 Barley EST endosperm libra... 38 0.47
gb|CV054889.1|CV054889 BNEL114d8 Barley EST endosperm libra... 38 0.47
gb|CV055350.1|CV055350 BNEL119f3 Barley EST endosperm libra... 38 0.47
gb|CV062012.1|CV062012 BNEL75d12 Barley EST endosperm libra... 38 0.47
>gb|BF627260.2|BF627260 HVSMEb0004G03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004G03f, mRNA sequence
Length = 770
Score = 577 bits (291), Expect = e-163
Identities = 498/567 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 51 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 110
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 111 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 170
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 171 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 230
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 231 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 290
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 291 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 350
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 351 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 410
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 411 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 470
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 471 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 530
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaagga 609
||||||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||||||||
Sbjct: 531 gccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaagga 590
Query: 610 ggaacagcaggggcttcaaggtctaag 636
|||||||||||||||||||||| ||||
Sbjct: 591 ggaacagcaggggcttcaaggtttaag 617
>gb|BG418403.2|BG418403 HVSMEk0022J07f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022J07f, mRNA sequence
Length = 811
Score = 577 bits (291), Expect = e-163
Identities = 498/567 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 35 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 94
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 95 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 154
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 155 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 214
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 215 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 274
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 275 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 334
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 335 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 394
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 395 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 454
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 455 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 514
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaagga 609
||||||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||||||||
Sbjct: 515 gccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaagga 574
Query: 610 ggaacagcaggggcttcaaggtctaag 636
|||||||||||||||||||||| ||||
Sbjct: 575 ggaacagcaggggcttcaaggtttaag 601
>gb|BQ460366.1|BQ460366 HA09O18r HA Hordeum vulgare subsp. vulgare cDNA clone HA09O18
5-PRIME, mRNA sequence
Length = 632
Score = 577 bits (291), Expect = e-163
Identities = 498/567 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 65 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 124
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 125 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 184
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 185 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 244
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 245 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 304
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 305 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 364
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 365 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 424
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 425 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 484
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 485 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 544
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaagga 609
||||||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||||||||
Sbjct: 545 gccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaagga 604
Query: 610 ggaacagcaggggcttcaaggtctaag 636
|||||||||||||||||||||| ||||
Sbjct: 605 ggaacagcaggggcttcaaggtttaag 631
>gb|BU977345.1|BU977345 HA11E06r HA Hordeum vulgare subsp. vulgare cDNA clone HA11E06
5-PRIME, mRNA sequence
Length = 617
Score = 577 bits (291), Expect = e-163
Identities = 498/567 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 32 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 91
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 92 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 151
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 152 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 211
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 212 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 271
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 272 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 331
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 332 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 391
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 392 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 451
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 452 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 511
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaagga 609
||||||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||||||||
Sbjct: 512 gccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaagga 571
Query: 610 ggaacagcaggggcttcaaggtctaag 636
|||||||||||||||||||||| ||||
Sbjct: 572 ggaacagcaggggcttcaaggtttaag 598
>gb|CA009098.1|CA009098 HU13C18r HU Hordeum vulgare subsp. vulgare cDNA clone HU13C18
5-PRIME, mRNA sequence
Length = 600
Score = 577 bits (291), Expect = e-163
Identities = 498/567 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 25 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 84
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 85 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 144
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 145 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 204
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 205 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 264
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 265 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 324
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 325 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 384
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 385 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 444
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 445 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 504
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaagga 609
||||||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||||||||
Sbjct: 505 gccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaagga 564
Query: 610 ggaacagcaggggcttcaaggtctaag 636
|||||||||||||||||||||| ||||
Sbjct: 565 ggaacagcaggggcttcaaggtttaag 591
>gb|BU998242.1|BU998242 HI10G24r HI Hordeum vulgare subsp. vulgare cDNA clone HI10G24
5-PRIME, mRNA sequence
Length = 638
Score = 571 bits (288), Expect = e-161
Identities = 495/564 (87%)
Strand = Plus / Plus
Query: 73 tgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaagt 132
|||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 47 tgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgcccaagt 106
Query: 133 ccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcaggacaa 192
| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| |
Sbjct: 107 cggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggaggacca 166
Query: 193 agagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccgc 252
||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||
Sbjct: 167 agagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggccgc 226
Query: 253 cgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtga 312
|||||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||
Sbjct: 227 cgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtga 286
Query: 313 ttgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcg 372
| ||||||||| | ||||| ||| ||||| || |||| | ||||| |||||||| ||
Sbjct: 287 tcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtggccg 346
Query: 373 cgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctca 432
||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||| |
Sbjct: 347 cgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcctta 406
Query: 433 ccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtc 492
|||| ||||||||||| |||||||| || ||||| || |||||| |||| ||||||||||
Sbjct: 407 cctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtc 466
Query: 493 ctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagcc 552
| |||||||| ||||||||||| |||||||| || || ||||||||||| |||||||
Sbjct: 467 ccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacacagcc 526
Query: 553 acaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagga 612
|||||||||| ||||| ||||| ||||| ||||| || |||||||| |||||||||||||
Sbjct: 527 acaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggagga 586
Query: 613 acagcaggggcttcaaggtctaag 636
||||||||||||||||||| ||||
Sbjct: 587 acagcaggggcttcaaggtttaag 610
>gb|CA029760.1|CA029760 HX05C06r HX Hordeum vulgare subsp. vulgare cDNA clone HX05C06
5-PRIME, mRNA sequence
Length = 664
Score = 571 bits (288), Expect = e-161
Identities = 495/564 (87%)
Strand = Plus / Plus
Query: 73 tgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaagt 132
|||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 75 tgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgcccaagt 134
Query: 133 ccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcaggacaa 192
| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| |
Sbjct: 135 cggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggaggacca 194
Query: 193 agagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccgc 252
||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||
Sbjct: 195 agagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggccgc 254
Query: 253 cgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtga 312
|||||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||
Sbjct: 255 cgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtga 314
Query: 313 ttgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcg 372
| ||||||||| | ||||| ||| ||||| || |||| | ||||| |||||||| ||
Sbjct: 315 tcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtggccg 374
Query: 373 cgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctca 432
||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||| |
Sbjct: 375 cgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcctta 434
Query: 433 ccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtc 492
|||| ||||||||||| |||||||| || ||||| || |||||| |||| ||||||||||
Sbjct: 435 cctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtc 494
Query: 493 ctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagcc 552
| |||||||| ||||||||||| |||||||| || || ||||||||||| |||||||
Sbjct: 495 ccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacacagcc 554
Query: 553 acaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagga 612
|||||||||| ||||| ||||| ||||| ||||| || |||||||| |||||||||||||
Sbjct: 555 acaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggagga 614
Query: 613 acagcaggggcttcaaggtctaag 636
||||||||||||||||||| ||||
Sbjct: 615 acagcaggggcttcaaggtttaag 638
>gb|CA029893.1|CA029893 HX05I04r HX Hordeum vulgare subsp. vulgare cDNA clone HX05I04
5-PRIME, mRNA sequence
Length = 665
Score = 571 bits (288), Expect = e-161
Identities = 495/564 (87%)
Strand = Plus / Plus
Query: 73 tgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaagt 132
|||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 74 tgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgcccaagt 133
Query: 133 ccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcaggacaa 192
| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| |
Sbjct: 134 cggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggaggacca 193
Query: 193 agagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccgc 252
||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||
Sbjct: 194 agagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggccgc 253
Query: 253 cgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtga 312
|||||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||
Sbjct: 254 cgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtga 313
Query: 313 ttgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcg 372
| ||||||||| | ||||| ||| ||||| || |||| | ||||| |||||||| ||
Sbjct: 314 tcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtggccg 373
Query: 373 cgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctca 432
||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||| |
Sbjct: 374 cgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcctta 433
Query: 433 ccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtc 492
|||| ||||||||||| |||||||| || ||||| || |||||| |||| ||||||||||
Sbjct: 434 cctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtc 493
Query: 493 ctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagcc 552
| |||||||| ||||||||||| |||||||| || || ||||||||||| |||||||
Sbjct: 494 ccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacacagcc 553
Query: 553 acaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagga 612
|||||||||| ||||| ||||| ||||| ||||| || |||||||| |||||||||||||
Sbjct: 554 acaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggagga 613
Query: 613 acagcaggggcttcaaggtctaag 636
||||||||||||||||||| ||||
Sbjct: 614 acagcaggggcttcaaggtttaag 637
>gb|CA031805.1|CA031805 HX11C24r HX Hordeum vulgare subsp. vulgare cDNA clone HX11C24
5-PRIME, mRNA sequence
Length = 636
Score = 571 bits (288), Expect = e-161
Identities = 495/564 (87%)
Strand = Plus / Plus
Query: 73 tgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaagt 132
|||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 tgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgcccaagt 120
Query: 133 ccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcaggacaa 192
| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| |
Sbjct: 121 cggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggaggacca 180
Query: 193 agagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccgc 252
||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||
Sbjct: 181 agagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggccgc 240
Query: 253 cgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtga 312
|||||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||
Sbjct: 241 cgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtga 300
Query: 313 ttgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcg 372
| ||||||||| | ||||| ||| ||||| || |||| | ||||| |||||||| ||
Sbjct: 301 tcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtggccg 360
Query: 373 cgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctca 432
||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||| |
Sbjct: 361 cgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcctta 420
Query: 433 ccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtc 492
|||| ||||||||||| |||||||| || ||||| || |||||| |||| ||||||||||
Sbjct: 421 cctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtc 480
Query: 493 ctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagcc 552
| |||||||| ||||||||||| |||||||| || || ||||||||||| |||||||
Sbjct: 481 ccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacacagcc 540
Query: 553 acaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagga 612
|||||||||| ||||| ||||| ||||| ||||| || |||||||| |||||||||||||
Sbjct: 541 acaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggagga 600
Query: 613 acagcaggggcttcaaggtctaag 636
||||||||||||||||||| ||||
Sbjct: 601 acagcaggggcttcaaggtttaag 624
>gb|CA028584.1|CA028584 HZ62I08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62I08
5-PRIME, mRNA sequence
Length = 561
Score = 557 bits (281), Expect = e-157
Identities = 485/553 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 9 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 68
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 69 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 128
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 129 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 188
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 189 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 248
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 249 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 308
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 309 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 368
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 369 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 428
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 429 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 488
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaagga 609
||||||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||||||||
Sbjct: 489 gccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaagga 548
Query: 610 ggaacagcagggg 622
|||||||||||||
Sbjct: 549 ggaacagcagggg 561
>gb|BU979070.1|BU979070 HA15B06r HA Hordeum vulgare subsp. vulgare cDNA clone HA15B06
5-PRIME, mRNA sequence
Length = 576
Score = 541 bits (273), Expect = e-152
Identities = 477/545 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 32 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 91
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 92 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 151
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 152 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 211
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 212 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 271
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 272 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 331
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 332 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 391
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 392 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 451
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 452 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 511
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaagga 609
||||||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||||||||
Sbjct: 512 gccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaagga 571
Query: 610 ggaac 614
|||||
Sbjct: 572 ggaac 576
>gb|BU998287.1|BU998287 HI10J07r HI Hordeum vulgare subsp. vulgare cDNA clone HI10J07
5-PRIME, mRNA sequence
Length = 597
Score = 519 bits (262), Expect = e-146
Identities = 466/534 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 64 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 123
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 124 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 183
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 184 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 243
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 244 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 303
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 304 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 363
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 364 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 423
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 424 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 483
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 484 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 543
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagag 603
||||||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||
Sbjct: 544 gccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagag 597
>gb|BQ470360.1|BQ470360 HX02L09r HX Hordeum vulgare subsp. vulgare cDNA clone HX02L09
5-PRIME, mRNA sequence
Length = 592
Score = 515 bits (260), Expect = e-145
Identities = 461/528 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 65 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 124
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 125 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 184
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 185 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 244
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 245 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 304
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 305 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 364
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 365 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 424
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 425 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 484
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 485 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 544
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgagaagg 597
||||||||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 545 gccacaccaagccatatgtccgctccaagggcaggaaattcgagaagg 592
>gb|BU990707.1|BU990707 HF25N06r HF Hordeum vulgare subsp. vulgare cDNA clone HF25N06
5-PRIME, mRNA sequence
Length = 562
Score = 513 bits (259), Expect = e-144
Identities = 460/527 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 36 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 95
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 96 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 155
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 156 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 215
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 216 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 275
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 276 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 335
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 336 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 395
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 396 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 455
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 456 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 515
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgagaag 596
||||||||||||| ||||| ||||| ||||| ||||| || ||||||
Sbjct: 516 gccacaccaagccatatgtccgctccaagggcaggaaattcgagaag 562
>gb|AV913597.1|AV913597 AV913597 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22k10 5', mRNA sequence
Length = 608
Score = 509 bits (257), Expect = e-143
Identities = 455/521 (87%)
Strand = Plus / Plus
Query: 116 gcgcacggcgcccaagtccgacgatgtctacctcaagctcctcgtcaagctctaccgctt 175
|||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1 gcgcacggcgcccaagtcggacgatgtgtacctcaagctgctcgtcaagctctaccgctt 60
Query: 176 ccttgtgcgcaggacaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgag 235
||| ||||| ||||| |||||| | ||||||||||||||||| ||||| |||||||||||
Sbjct: 61 cctggtgcggaggaccaagagccagttcaacgccgtgatcctgaagcggctcttcatgag 120
Query: 236 caagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaaggg 295
|||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 121 caagacaaaccggccgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggc 180
Query: 296 tgatcagatcgccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgcc 355
|| ||||||| ||||| ||||||||| | ||||| ||| ||||| || |||| | ||
Sbjct: 181 ggacaagatcgctgtgatcgtgggcaccatcaccgatgaccagagggtctacgagatacc 240
Query: 356 ggcgatgaaggtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgc 415
||| |||||||| ||||||||||||||| ||||| |||||||||||||| |||| ||
Sbjct: 241 ggcaatgaaggtggccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgc 300
Query: 416 tggcggagagtgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacac 475
||| || |||||||| ||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 301 tggtggcgagtgccttacctttgaccagctcgccctccgtgctccgcttggacagaacac 360
Query: 476 ggttctgctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcacc 535
| |||| ||||||||||| |||||||| ||||||||||| |||||||| || || ||
Sbjct: 361 gcttctcctgaggggtcccaagaacgccagggaagctgttaggcactttggcaaagctcc 420
Query: 536 aggagtgcctcacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaa 595
||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||| || |||||
Sbjct: 421 aggagtgccacacagccacaccaagccatatgtccgctccaagggcaggaaattcgagaa 480
Query: 596 ggcgagaggaaggaggaacagcaggggcttcaaggtctaag 636
||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 481 ggcaagaggaaggaggaacagcaggggcttcaaggtttaag 521
>gb|BQ469660.1|BQ469660 HZ01H18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01H18
5-PRIME, mRNA sequence
Length = 574
Score = 509 bits (257), Expect = e-143
Identities = 452/517 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 54 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 113
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 114 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 173
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 174 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 233
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 234 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 293
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 294 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 353
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 354 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 413
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 414 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 473
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 474 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 533
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaa 586
||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 534 gccacaccaagccatatgtccgctccaagggcaggaa 570
>gb|CA018031.1|CA018031 HV07D06r HV Hordeum vulgare subsp. vulgare cDNA clone HV07D06
5-PRIME, mRNA sequence
Length = 580
Score = 509 bits (257), Expect = e-143
Identities = 452/517 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 59 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 118
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 119 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 178
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 179 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 238
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 239 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 298
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 299 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 358
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 359 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 418
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 419 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 478
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 479 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 538
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaa 586
||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 539 gccacaccaagccatatgtccgctccaagggcaggaa 575
>gb|CK123379.1|CK123379 BES1824103m02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M023 5-PRIME, mRNA sequence
Length = 724
Score = 507 bits (256), Expect = e-142
Identities = 461/528 (87%), Gaps = 1/528 (0%)
Strand = Plus / Plus
Query: 110 gaccaagcgcacggcgcccaagtccgacgatgtctacctcaagctcctcgtcaagctcta 169
|||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 1 gaccaagcgcacggcgcccaagtcggacgatgtgtacctcaagctgctcgtcaagctcta 60
Query: 170 ccgcttccttgtgcgcaggacaaagagcaacttcaacgccgtgatcctcaagcgcctctt 229
||||||||| ||||| ||||| |||||| | ||||||||||||||||| ||||| |||||
Sbjct: 61 ccgcttcctggtgcggaggaccaagagccagttcaacgccgtgatcctgaagcggctctt 120
Query: 230 catgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttcatggaggg 289
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 catgagcaagacaaaccggccgccgctctcgatgcgccgcctcgtcaggttcatggatgg 180
Query: 290 gaagggtgatcagatcgccgtgattgtgggcaccgtgaccgacgacaagaggatcagcga 349
||||| || ||||||| ||||| ||||||||| | ||||| ||| ||||| || |||
Sbjct: 181 gaaggcggacaagatcgctgtgatcgtgggcaccatcaccgatgaccagagggtctacga 240
Query: 350 ggtgccggcgatgaaggtctgcgcgctcaggttcactgagacagcgagggccaggatcat 409
| | ||||| |||||||| ||||||||||||||| ||||| |||||||||||||| |
Sbjct: 241 gataccggcaatgaaggtggccgcgctcaggttcaccgagacggcgagggccaggattgt 300
Query: 410 caatgctggcggagagtgcctcaccttcgaccagctcgcgctccgtgccccacttgggca 469
||| ||||| || |||||||| ||||| ||||||||||| |||||||| || ||||| ||
Sbjct: 301 caacgctggtggcgagtgccttacctttgaccagctcgccctccgtgctccgcttggaca 360
Query: 470 aaacacggttctgctgaggggtcctaagaacgctaggg-aagctgtcaggcacttcgggc 528
|||||| |||| ||||||||||| |||||||| |||| ||||||| |||||||| ||
Sbjct: 361 gaacacgcttctcctgaggggtcccaagaacgccagggnaagctgttaggcactttggca 420
Query: 529 ctgcaccaggagtgcctcacagccacaccaagccttatgttcgctcgaagggtaggaagt 588
|| ||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 421 aagctccaggagtgccacacagccacaccaagccatatgtccgctccaagggcaggaaat 480
Query: 589 ttgagaaggcgagaggaaggaggaacagcaggggcttcaaggtctaag 636
| |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 481 tcgagaaggcaagaggaaggaggaacagcaggggcttcaaggtttaag 528
>gb|BQ470577.1|BQ470577 HX03G08r HX Hordeum vulgare subsp. vulgare cDNA clone HX03G08
5-PRIME, mRNA sequence
Length = 546
Score = 472 bits (238), Expect = e-131
Identities = 400/454 (88%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 127
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 128 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 187
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 188 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 247
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 248 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 307
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 308 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 367
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 368 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 427
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 428 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 487
Query: 490 gtcctaagaacgctagggaagctgtcaggcactt 523
|||| |||||||| ||||||||||| ||||||||
Sbjct: 488 gtcccaagaacgccagggaagctgttaggcactt 521
>gb|BU979856.1|BU979856 HA17I22r HA Hordeum vulgare subsp. vulgare cDNA clone HA17I22
5-PRIME, mRNA sequence
Length = 523
Score = 472 bits (238), Expect = e-131
Identities = 400/454 (88%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 53 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 112
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 113 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 172
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 173 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 232
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 233 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 292
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 293 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 352
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 353 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 412
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 413 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 472
Query: 490 gtcctaagaacgctagggaagctgtcaggcactt 523
|||| |||||||| ||||||||||| ||||||||
Sbjct: 473 gtcccaagaacgccagggaagctgttaggcactt 506
>gb|CA025841.1|CA025841 HZ53E20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53E20
5-PRIME, mRNA sequence
Length = 543
Score = 472 bits (238), Expect = e-131
Identities = 400/454 (88%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 65 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 124
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 125 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 184
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 185 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 244
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 245 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 304
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 305 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 364
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 365 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 424
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 425 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 484
Query: 490 gtcctaagaacgctagggaagctgtcaggcactt 523
|||| |||||||| ||||||||||| ||||||||
Sbjct: 485 gtcccaagaacgccagggaagctgttaggcactt 518
>gb|BU971281.1|BU971281 HB17C13r BC Hordeum vulgare subsp. vulgare cDNA clone HB17C13
5-PRIME, mRNA sequence
Length = 505
Score = 470 bits (237), Expect = e-131
Identities = 429/493 (87%)
Strand = Plus / Plus
Query: 144 tacctcaagctcctcgtcaagctctaccgcttccttgtgcgcaggacaaagagcaacttc 203
||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||| | |||
Sbjct: 12 tacctcaagctgctcgtcaagctctaccgcttcctggtgcggaggaccaagagccagttc 71
Query: 204 aacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccgccgctctcgatg 263
|||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 72 aacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggccgccgctctcgatg 131
Query: 264 cgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtgggcacc 323
||||||||||||||||||||||| ||||||| || ||||||| ||||| |||||||||
Sbjct: 132 cgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtgatcgtgggcacc 191
Query: 324 gtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttc 383
| ||||| ||| ||||| || |||| | ||||| |||||||| |||||||||||||
Sbjct: 192 atcaccgatgaccagagggtctacgagataccggcaatgaaggtggccgcgctcaggttc 251
Query: 384 actgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgaccag 443
|| ||||| |||||||||||||| |||| ||||| || |||||||| ||||| ||||||
Sbjct: 252 accgagacggcgagggccaggattgtcaacgctggtggcgagtgccttacctttgaccag 311
Query: 444 ctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaacgct 503
||||| |||||||| || ||||| || |||||| |||| ||||||||||| ||||||||
Sbjct: 312 ctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtcccaagaacgcc 371
Query: 504 agggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaagcct 563
||||||||||| |||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 372 agggaagctgttaggcactttggcaaagctccaggagtgccacacagccacaccaagcca 431
Query: 564 tatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggc 623
||||| ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 432 tatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggaggaacagcaggggc 491
Query: 624 ttcaaggtctaag 636
|||||||| ||||
Sbjct: 492 ttcaaggtttaag 504
>gb|BJ452177.1|BJ452177 BJ452177 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38a15 5', mRNA sequence
Length = 610
Score = 458 bits (231), Expect = e-127
Identities = 423/487 (86%)
Strand = Plus / Plus
Query: 150 aagctcctcgtcaagctctaccgcttccttgtgcgcaggacaaagagcaacttcaacgcc 209
||||| ||||||||||||||||||||||| ||||| ||||| |||||| | |||||||||
Sbjct: 2 aagctgctcgtcaagctctaccgcttcctggtgcggaggaccaagagccagttcaacgcc 61
Query: 210 gtgatcctcaagcgcctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgc 269
|||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 62 gtgatcctgaagcggctcttcatgagcaagacaaaccggccgccgctctcgatgcgccgc 121
Query: 270 ctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtgggcaccgtgacc 329
||||||||||||||||| ||||||| || ||||||| ||||| ||||||||| | |||
Sbjct: 122 ctcgtcaggttcatggatgggaaggcggacaagatcgctgtgatcgtgggcaccatcacc 181
Query: 330 gacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgag 389
|| ||| ||||| || |||| | ||||| |||||||| ||||||||||||||| |||
Sbjct: 182 gatgaccagagggtctacgagataccggcaatgaaggtggccgcgctcaggttcaccgag 241
Query: 390 acagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgaccagctcgcg 449
|| |||||||||||||| |||| ||||| || |||||||| ||||| |||||||||||
Sbjct: 242 acggcgagggccaggattgtcaacgctggtggcgagtgccttacctttgaccagctcgcc 301
Query: 450 ctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaacgctagggaa 509
|||||||| || ||||| || |||||| |||| ||||||||||| |||||||| ||||||
Sbjct: 302 ctccgtgctccgcttggacagaacacgcttctcctgaggggtcccaagaacgccagggaa 361
Query: 510 gctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaagccttatgtt 569
||||| |||||||| || || ||||||||||| ||||||||||||||||| |||||
Sbjct: 362 gctgttaggcactttggcaaagctccaggagtgccacacagccacaccaagccatatgtc 421
Query: 570 cgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggcttcaag 629
||||| ||||| ||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 422 cgctccaagggcaggaaattcgagaaggcaagaggaaggaggaacagcaggggcttcaag 481
Query: 630 gtctaag 636
|| ||||
Sbjct: 482 gtttaag 488
>gb|BQ469398.1|BQ469398 HM04H19r HM Hordeum vulgare subsp. vulgare cDNA clone HM04H19
5-PRIME, mRNA sequence
Length = 495
Score = 458 bits (231), Expect = e-127
Identities = 390/443 (88%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 53 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 112
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 113 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 172
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 173 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 232
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 233 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 292
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 293 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 352
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 353 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 412
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 413 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 472
Query: 490 gtcctaagaacgctagggaagct 512
|||| |||||||| |||||||||
Sbjct: 473 gtcccaagaacgccagggaagct 495
>gb|BM373292.2|BM373292 EBma04_SQ003_N23_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ003_N23 5', mRNA sequence
Length = 540
Score = 448 bits (226), Expect = e-124
Identities = 415/478 (86%)
Strand = Plus / Plus
Query: 159 gtcaagctctaccgcttccttgtgcgcaggacaaagagcaacttcaacgccgtgatcctc 218
|||||||||||||||||||| ||||| ||||| |||||| | |||||||||||||||||
Sbjct: 1 gtcaagctctaccgcttcctggtgcggaggaccaagagccagttcaacgccgtgatcctg 60
Query: 219 aagcgcctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcagg 278
||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 61 aagcggctcttcatgagcaagacaaaccggccgccgctctcgatgcgccgcctcgtcagg 120
Query: 279 ttcatggaggggaagggtgatcagatcgccgtgattgtgggcaccgtgaccgacgacaag 338
|||||||| ||||||| || ||||||| ||||| ||||||||| | ||||| ||| ||
Sbjct: 121 ttcatggatgggaaggcggacaagatcgctgtgatcgtgggcaccatcaccgatgaccag 180
Query: 339 aggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgagacagcgagg 398
||| || |||| | ||||| |||||||| ||||||||||||||| ||||| ||||||
Sbjct: 181 agggtctacgagataccggcaatgaaggtggccgcgctcaggttcaccgagacggcgagg 240
Query: 399 gccaggatcatcaatgctggcggagagtgcctcaccttcgaccagctcgcgctccgtgcc 458
|||||||| |||| ||||| || |||||||| ||||| ||||||||||| ||||||||
Sbjct: 241 gccaggattgtcaacgctggtggcgagtgccttacctttgaccagctcgccctccgtgct 300
Query: 459 ccacttgggcaaaacacggttctgctgaggggtcctaagaacgctagggaagctgtcagg 518
|| ||||| || |||||| |||| ||||||||||| |||||||| ||||||||||| |||
Sbjct: 301 ccgcttggacagaacacgcttctcctgaggggtcccaagaacgccagggaagctgttagg 360
Query: 519 cacttcgggcctgcaccaggagtgcctcacagccacaccaagccttatgttcgctcgaag 578
||||| || || ||||||||||| ||||||||||||||||| ||||| ||||| |||
Sbjct: 361 cactttggcaaagctccaggagtgccacacagccacaccaagccatatgtccgctccaag 420
Query: 579 ggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggcttcaaggtctaag 636
|| ||||| || |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 421 ggcaggaaattcgagaaggcaagaggaaggaggaacagcaggggcttcaaggtttaag 478
>gb|AV918900.1|AV918900 AV918900 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22k10 3', mRNA sequence
Length = 653
Score = 422 bits (213), Expect = e-117
Identities = 409/473 (86%), Gaps = 1/473 (0%)
Strand = Plus / Minus
Query: 165 ctctaccgcttccttgtgcgcaggacaaagagcaacttcaacgccg-tgatcctcaagcg 223
|||||||||||||| ||||| ||||| |||||| | |||||||||| ||||||| |||||
Sbjct: 653 ctctaccgcttcctggtgcggaggaccaagagccagttcaacgccggtgatcctgaagcg 594
Query: 224 cctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttcat 283
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 593 gctcttcatgagcaagacaaaccggccgccgctctcgatgcgccgcctcgtcaggttcat 534
Query: 284 ggaggggaagggtgatcagatcgccgtgattgtgggcaccgtgaccgacgacaagaggat 343
||| ||||||| || ||||||| ||||| ||||||||| | ||||| ||| ||||| |
Sbjct: 533 ggatgggaaggcggacaagatcgctgtgatcgtgggcaccatcaccgatgaccagagggt 474
Query: 344 cagcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgagacagcgagggccag 403
| |||| | ||||| |||||||| ||||||||||||||| ||||| |||||||||||
Sbjct: 473 ctacgagataccggcaatgaaggtggccgcgctcaggttcaccgagacggcgagggccag 414
Query: 404 gatcatcaatgctggcggagagtgcctcaccttcgaccagctcgcgctccgtgccccact 463
||| |||| ||||| || |||||||| ||||| ||||||||||| |||||||| || ||
Sbjct: 413 gattgtcaacgctggtggcgagtgccttacctttgaccagctcgccctccgtgctccgct 354
Query: 464 tgggcaaaacacggttctgctgaggggtcctaagaacgctagggaagctgtcaggcactt 523
||| || |||||| |||| ||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 353 tggacagaacacgcttctcctgaggggtcccaagaacgccagggaagctgttaggcactt 294
Query: 524 cgggcctgcaccaggagtgcctcacagccacaccaagccttatgttcgctcgaagggtag 583
|| || ||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||
Sbjct: 293 tggcaaagctccaggagtgccacacagccacaccaagccatatgtccgctccaagggcag 234
Query: 584 gaagtttgagaaggcgagaggaaggaggaacagcaggggcttcaaggtctaag 636
||| || |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 233 gaaattcgagaaggcaagaggaaggaggaacagcaggggcttcaaggtttaag 181
>gb|BG416306.1|BG416306 HVSMEk0011C24f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0011C24f, mRNA sequence
Length = 1013
Score = 416 bits (210), Expect = e-115
Identities = 412/478 (86%), Gaps = 1/478 (0%)
Strand = Plus / Plus
Query: 159 gtcaagctctaccgcttccttgtgcgcaggacaaagagcaacttcaacgccgtgatcctc 218
|||||||||||||||||||| ||||| ||||| |||||| | |||||||||||||||||
Sbjct: 1 gtcaagctctaccgcttcctggtgcggaggaccaagagcca-ttcaacgccgtgatcctg 59
Query: 219 aagcgcctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcagg 278
||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 60 aagcggctcttcatgagcaagacaaaccggccgccgctctcgatgcgccgcctcgtcagg 119
Query: 279 ttcatggaggggaagggtgatcagatcgccgtgattgtgggcaccgtgaccgacgacaag 338
|||||||| ||||||| || ||||||| ||||| ||||||||| | ||||| ||| ||
Sbjct: 120 ttcatggatgggaaggcggacaagatcgctgtgatcgtgggcaccatcaccgatgaccag 179
Query: 339 aggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgagacagcgagg 398
||| || |||| | ||||| |||||||| ||||||||||||||| ||||| ||||||
Sbjct: 180 agggtctacgagataccggcaatgaaggtggccgcgctcaggttcaccgagacggcgagg 239
Query: 399 gccaggatcatcaatgctggcggagagtgcctcaccttcgaccagctcgcgctccgtgcc 458
|||||||| |||| ||||| || |||||||| ||||| ||||||||||| ||||||||
Sbjct: 240 gccaggattgtcaacgctggtggcgagtgccttacctttgaccagctcgccctccgtgct 299
Query: 459 ccacttgggcaaaacacggttctgctgaggggtcctaagaacgctagggaagctgtcagg 518
|| ||||| || |||||| || | ||||||||||| |||||||| ||||||||||| |||
Sbjct: 300 ccgcttggacagaacacgcttttcctgaggggtcccaagaacgccagggaagctgttagg 359
Query: 519 cacttcgggcctgcaccaggagtgcctcacagccacaccaagccttatgttcgctcgaag 578
||||| || || ||||||||||| ||||||||||||||||| ||||| ||||| |||
Sbjct: 360 cactttggcaaagctccaggagtgccacacagccacaccaagccatatgtccgctccaag 419
Query: 579 ggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggcttcaaggtctaag 636
|| ||||| || |||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 420 ggcaggaaattcgagaaggcatgaggaaggaggaacagcgggggcttcaaggtttaag 477
>gb|CA017379.1|CA017379 HV05A14r HV Hordeum vulgare subsp. vulgare cDNA clone HV05A14
5-PRIME, mRNA sequence
Length = 500
Score = 414 bits (209), Expect = e-114
Identities = 377/433 (87%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 65 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 124
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||| || ||||||||||||||||||||||| ||||| ||||
Sbjct: 125 agtcggacgatgtgtacctttttctgctcgtcaagctctaccgcttcctggtgcggagga 184
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 185 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 244
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 245 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 304
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 305 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 364
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 365 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 424
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 425 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 484
Query: 490 gtcctaagaacgc 502
|||| ||||||||
Sbjct: 485 gtcccaagaacgc 497
>gb|BQ472232.1|BQ472232 HV04M15r HV Hordeum vulgare subsp. vulgare cDNA clone HV04M15
5-PRIME, mRNA sequence
Length = 456
Score = 404 bits (204), Expect = e-111
Identities = 342/388 (88%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 65 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 124
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| | ||| ||||
Sbjct: 125 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggggcggagga 184
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 185 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 244
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 245 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 304
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 305 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 364
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 365 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 424
Query: 430 tcaccttcgaccagctcgcgctccgtgc 457
| ||||| ||||||||||| ||||||||
Sbjct: 425 ttacctttgaccagctcgccctccgtgc 452
>gb|BM097568.2|BM097568 EBem04_SQ002_B04_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_B04 5', mRNA sequence
Length = 583
Score = 404 bits (204), Expect = e-111
Identities = 378/436 (86%)
Strand = Plus / Plus
Query: 201 ttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccgccgctctcg 260
||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 6 ttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggccgccgctctcg 65
Query: 261 atgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtgggc 320
|||||||||||||||||||||||||| ||||||| || ||||||| ||||| ||||||
Sbjct: 66 atgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtgatcgtgggc 125
Query: 321 accgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcagg 380
||| | ||||| ||| ||||| || |||| | ||||| |||||||| ||||||||||
Sbjct: 126 accatcaccgatgaccagagggtctacgagataccggcaatgaaggtggccgcgctcagg 185
Query: 381 ttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgac 440
||||| ||||| |||||||||||||| |||| ||||| || |||||||| ||||| |||
Sbjct: 186 ttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgccttacctttgac 245
Query: 441 cagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaac 500
|||||||| |||||||| || ||||| || |||||| |||| ||||||||||| ||||||
Sbjct: 246 cagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtcccaagaac 305
Query: 501 gctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaag 560
|| ||||||||||| |||||||| || || ||||||||||| |||||||||||||||
Sbjct: 306 gccagggaagctgttaggcactttggcaaagctccaggagtgccacacagccacaccaag 365
Query: 561 ccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcagg 620
|| ||||| ||||| ||||| ||||| || |||||||| |||||||||||||||||||||
Sbjct: 366 ccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggaggaacagcagg 425
Query: 621 ggcttcaaggtctaag 636
||||||||||| ||||
Sbjct: 426 ggcttcaaggtttaag 441
>gb|BF253836.2|BF253836 HVSMEf0002E04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002E04f, mRNA sequence
Length = 609
Score = 377 bits (190), Expect = e-103
Identities = 361/418 (86%)
Strand = Plus / Plus
Query: 219 aagcgcctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcagg 278
||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 5 aagcggctcttcatgagcaagacaaaccggccgccgctctcgatgcgccgcctcgtcagg 64
Query: 279 ttcatggaggggaagggtgatcagatcgccgtgattgtgggcaccgtgaccgacgacaag 338
|||||||| ||||||| || ||||||| ||||| ||||||||| | ||||| ||| ||
Sbjct: 65 ttcatggatgggaaggcggacaagatcgctgtgatcgtgggcaccatcaccgatgaccag 124
Query: 339 aggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgagacagcgagg 398
||| || |||| | ||||| |||||||| ||||||||||||||| ||||| ||||||
Sbjct: 125 agggtctacgagataccggcaatgaaggtggccgcgctcaggttcaccgagacggcgagg 184
Query: 399 gccaggatcatcaatgctggcggagagtgcctcaccttcgaccagctcgcgctccgtgcc 458
|||||||| |||| ||||| || |||||||| ||||| ||||||||||| ||||||||
Sbjct: 185 gccaggattgtcaacgctggtggcgagtgccttacctttgaccagctcgccctccgtgct 244
Query: 459 ccacttgggcaaaacacggttctgctgaggggtcctaagaacgctagggaagctgtcagg 518
|| ||||| || |||||| |||| ||||||||||| |||||||| ||||||||||| |||
Sbjct: 245 ccgcttggacagaacacgcttctcctgaggggtcccaagaacgccagggaagctgttagg 304
Query: 519 cacttcgggcctgcaccaggagtgcctcacagccacaccaagccttatgttcgctcgaag 578
||||| || || ||||||||||| ||||||||||||||||| ||||| ||||| |||
Sbjct: 305 cactttggcaaagctccaggagtgccacacagccacaccaagccatatgtccgctccaag 364
Query: 579 ggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggcttcaaggtctaag 636
|| ||||| || |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 365 ggcaggaaattcgagaaggcaagaggaaggaggaacagcaggggcttcaaggtttaag 422
>gb|CA003637.1|CA003637 HS15B16r HS Hordeum vulgare subsp. vulgare cDNA clone HS15B16
5-PRIME, mRNA sequence
Length = 415
Score = 375 bits (189), Expect = e-102
Identities = 300/337 (89%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 70 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 129
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 130 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 189
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 190 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 249
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 309
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 310 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 369
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggat 406
||||||||||||||| ||||| ||||||||||||||
Sbjct: 370 ccgcgctcaggttcaccgagacggcgagggccaggat 406
>gb|BJ459730.1|BJ459730 BJ459730 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38a15 3', mRNA sequence
Length = 619
Score = 373 bits (188), Expect = e-102
Identities = 356/412 (86%)
Strand = Plus / Minus
Query: 225 ctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttcatg 284
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctcttcatgagcaagacaaaccggccgccgctctcgatgcgccgcctcgtcaggttcatg 560
Query: 285 gaggggaagggtgatcagatcgccgtgattgtgggcaccgtgaccgacgacaagaggatc 344
|| ||||||| || ||||||| ||||| ||||||||| | ||||| ||| ||||| ||
Sbjct: 559 gatgggaaggcggacaagatcgctgtgatcgtgggcaccatcaccgatgaccagagggtc 500
Query: 345 agcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgagacagcgagggccagg 404
|||| | ||||| |||||||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 499 tacgagataccggcaatgaaggtggccgcgctcaggttcaccgagacggcgagggccagg 440
Query: 405 atcatcaatgctggcggagagtgcctcaccttcgaccagctcgcgctccgtgccccactt 464
|| |||| ||||| || |||||||| ||||| ||||||||||| |||||||| || |||
Sbjct: 439 attgtcaacgctggtggcgagtgccttacctttgaccagctcgccctccgtgctccgctt 380
Query: 465 gggcaaaacacggttctgctgaggggtcctaagaacgctagggaagctgtcaggcacttc 524
|| || |||||| |||| ||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 379 ggacagaacacgcttctcctgaggggtcccaagaacgccagggaagctgttaggcacttt 320
Query: 525 gggcctgcaccaggagtgcctcacagccacaccaagccttatgttcgctcgaagggtagg 584
|| || ||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||
Sbjct: 319 ggcaaagctccaggagtgccacacagccacaccaagccatatgtccgctccaagggcagg 260
Query: 585 aagtttgagaaggcgagaggaaggaggaacagcaggggcttcaaggtctaag 636
|| || |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 259 aaattcgagaaggcaagaggaaggaggaacagcaggggcttcaaggtttaag 208
>gb|CB874518.1|CB874518 HX05I04w HX Hordeum vulgare subsp. vulgare cDNA clone HX05I04
3-PRIME, mRNA sequence
Length = 608
Score = 363 bits (183), Expect = 6e-099
Identities = 351/407 (86%)
Strand = Plus / Minus
Query: 230 catgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttcatggaggg 289
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 608 catgagcaagacaaaccggccgccgctctcgatgcgccgcctcgtcaggttcatggatgg 549
Query: 290 gaagggtgatcagatcgccgtgattgtgggcaccgtgaccgacgacaagaggatcagcga 349
||||| || ||||||| ||||| ||||||||| | ||||| ||| ||||| || |||
Sbjct: 548 gaaggcggacaagatcgctgtgatcgtgggcaccatcaccgatgaccagagggtctacga 489
Query: 350 ggtgccggcgatgaaggtctgcgcgctcaggttcactgagacagcgagggccaggatcat 409
| | ||||| |||||||| ||||||||||||||| ||||| |||||||||||||| |
Sbjct: 488 gataccggcaatgaaggtggccgcgctcaggttcaccgagacggcgagggccaggattgt 429
Query: 410 caatgctggcggagagtgcctcaccttcgaccagctcgcgctccgtgccccacttgggca 469
||| ||||| || |||||||| ||||| ||||||||||| |||||||| || ||||| ||
Sbjct: 428 caacgctggtggcgagtgccttacctttgaccagctcgccctccgtgctccgcttggaca 369
Query: 470 aaacacggttctgctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcc 529
|||||| |||| ||||||||||| |||||||| ||||||||||| |||||||| ||
Sbjct: 368 gaacacgcttctcctgaggggtcccaagaacgccagggaagctgttaggcactttggcaa 309
Query: 530 tgcaccaggagtgcctcacagccacaccaagccttatgttcgctcgaagggtaggaagtt 589
|| ||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 308 agctccaggagtgccacacagccacaccaagccatatgtccgctccaagggcaggaaatt 249
Query: 590 tgagaaggcgagaggaaggaggaacagcaggggcttcaaggtctaag 636
|||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 248 cgagaaggcaagaggaaggaggaacagcaggggcttcaaggtttaag 202
>gb|BU971081.1|BU971081 HB16I21r BC Hordeum vulgare subsp. vulgare cDNA clone HB16I21
5-PRIME, mRNA sequence
Length = 379
Score = 349 bits (176), Expect = 1e-094
Identities = 320/368 (86%)
Strand = Plus / Plus
Query: 144 tacctcaagctcctcgtcaagctctaccgcttccttgtgcgcaggacaaagagcaacttc 203
||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||| | |||
Sbjct: 12 tacctcaagctgctcgtcaagctctaccgcttcctggtgcggaggaccaagagccagttc 71
Query: 204 aacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccgccgctctcgatg 263
|||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 72 aacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggccgccgctctcgatg 131
Query: 264 cgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtgggcacc 323
||||||||||||||||||||||| ||||||| || ||||||| ||||| |||||||||
Sbjct: 132 cgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtgatcgtgggcacc 191
Query: 324 gtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttc 383
| ||||| ||| ||||| || |||| | ||||| |||||||| |||||||||||||
Sbjct: 192 atcaccgatgaccagagggtctacgagataccggcaatgaaggtggccgcgctcaggttc 251
Query: 384 actgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgaccag 443
|| ||||| |||||||||||||| |||| ||||| || |||||||| ||||| ||||||
Sbjct: 252 accgagacggcgagggccaggattgtcaacgctggtggcgagtgccttacctttgaccag 311
Query: 444 ctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaacgct 503
||||| |||||||| || ||||| || |||||| |||| ||||||||||| ||||||||
Sbjct: 312 ctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtcccaagaacgcc 371
Query: 504 agggaagc 511
||||||||
Sbjct: 372 agggaagc 379
>gb|CA028864.1|CA028864 HZ63H13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63H13
5-PRIME, mRNA sequence
Length = 326
Score = 349 bits (176), Expect = 1e-094
Identities = 281/316 (88%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 9 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 68
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 69 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 128
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 129 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 188
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 189 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 248
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 249 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 308
Query: 370 gcgcgctcaggttcac 385
|||||||||||||||
Sbjct: 309 ccgcgctcaggttcac 324
>gb|CV060273.1|CV060273 BNEL56d1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL56d1 5' similar to putative
cytoplasmic ribosomal protein L18, mRNA sequence
Length = 581
Score = 345 bits (174), Expect = 2e-093
Identities = 339/394 (86%)
Strand = Plus / Minus
Query: 243 aaccgcccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag 302
||||| |||||||||||||||||||||||||||||||||||||| ||||||| || ||
Sbjct: 579 aaccggccgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaag 520
Query: 303 atcgccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatg 362
||||| ||||| ||||||||| | ||||| ||| ||||| || |||| | ||||| |||
Sbjct: 519 atcgctgtgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatg 460
Query: 363 aaggtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcgga 422
||||| ||||||||||||||| ||||| |||||||||||||| |||| ||||| ||
Sbjct: 459 aaggtggccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggc 400
Query: 423 gagtgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctg 482
|||||||| ||||| ||||||||||| |||||||| || ||||| || |||||| ||||
Sbjct: 399 gagtgccttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctc 340
Query: 483 ctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtg 542
||||||||||| |||||||| ||||||||||| |||||||| || || |||||||||
Sbjct: 339 ctgaggggtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtg 280
Query: 543 cctcacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgaga 602
|| ||||||||||||||||| ||||| ||||| ||||| ||||| || |||||||| |||
Sbjct: 279 ccacacagccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaaga 220
Query: 603 ggaaggaggaacagcaggggcttcaaggtctaag 636
||||||||||||||||||||||||||||| ||||
Sbjct: 219 ggaaggaggaacagcaggggcttcaaggtttaag 186
>gb|BU994700.1|BU994700 HM07O12r HM Hordeum vulgare subsp. vulgare cDNA clone HM07O12
5-PRIME, mRNA sequence
Length = 577
Score = 341 bits (172), Expect = 2e-092
Identities = 334/388 (86%)
Strand = Plus / Plus
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgcc 308
|||||||||||||||||||||||||||||||||||||| ||||||| || |||||||
Sbjct: 11 ccgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgct 70
Query: 309 gtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtc 368
||||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 71 gtgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtg 130
Query: 369 tgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgc 428
||||||||||||||| ||||| |||||||||||||| |||| ||||| || ||||||
Sbjct: 131 gccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgc 190
Query: 429 ctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgagg 488
|| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| ||||||
Sbjct: 191 cttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgagg 250
Query: 489 ggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcac 548
||||| |||||||| ||||||||||| |||||||| || || ||||||||||| |||
Sbjct: 251 ggtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacac 310
Query: 549 agccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaagg 608
|||||||||||||| ||||| ||||| ||||| ||||| || |||||||| |||||||||
Sbjct: 311 agccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaagg 370
Query: 609 aggaacagcaggggcttcaaggtctaag 636
||||||||||||||||||||||| ||||
Sbjct: 371 aggaacagcaggggcttcaaggtttaag 398
>gb|CB880234.1|CB880234 HM05O12w HM Hordeum vulgare subsp. vulgare cDNA clone HM05O12
3-PRIME, mRNA sequence
Length = 575
Score = 341 bits (172), Expect = 2e-092
Identities = 334/388 (86%)
Strand = Plus / Minus
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgcc 308
|||||||||||||||||||||||||||||||||||||| ||||||| || |||||||
Sbjct: 567 ccgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgct 508
Query: 309 gtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtc 368
||||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 507 gtgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtg 448
Query: 369 tgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgc 428
||||||||||||||| ||||| |||||||||||||| |||| ||||| || ||||||
Sbjct: 447 gccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgc 388
Query: 429 ctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgagg 488
|| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| ||||||
Sbjct: 387 cttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgagg 328
Query: 489 ggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcac 548
||||| |||||||| ||||||||||| |||||||| || || ||||||||||| |||
Sbjct: 327 ggtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacac 268
Query: 549 agccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaagg 608
|||||||||||||| ||||| ||||| ||||| ||||| || |||||||| |||||||||
Sbjct: 267 agccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaagg 208
Query: 609 aggaacagcaggggcttcaaggtctaag 636
||||||||||||||||||||||| ||||
Sbjct: 207 aggaacagcaggggcttcaaggtttaag 180
>gb|BQ765813.1|BQ765813 EBro03_SQ008_B09_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_B09 5', mRNA sequence
Length = 585
Score = 339 bits (171), Expect = 9e-092
Identities = 333/387 (86%)
Strand = Plus / Plus
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 1 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 60
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | ||||| ||||||||
Sbjct: 61 tgatcgtgggcaccatcaccgatgaccagagggtctacgagataccggcaatgaaggtgg 120
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
||||||||||||||| ||||| |||||||||||||| |||| ||||| || |||||||
Sbjct: 121 ccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgcc 180
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
| ||||| ||||||||||| |||||||| || ||||| || |||||| |||| |||||||
Sbjct: 181 ttacctttgaccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggg 240
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
|||| |||||||| ||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 241 gtcccaagaacgccagggaagctgttaggcactttggcaaagctccaggagtgccacaca 300
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaagga 609
||||||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||||||||
Sbjct: 301 gccacaccaagccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaagga 360
Query: 610 ggaacagcaggggcttcaaggtctaag 636
|||||||||||||||||||||| ||||
Sbjct: 361 ggaacagcaggggcttcaaggtttaag 387
>gb|CA020678.1|CA020678 HZ37C14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37C14
5-PRIME, mRNA sequence
Length = 378
Score = 337 bits (170), Expect = 4e-091
Identities = 278/314 (88%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 65 ccatgggtatcgacctcgtcgccggcggccgcaacaagaggaccaagcgcacggcgccca 124
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 125 agtcggacgatgtgtacctcaagctgctcgtcaagctctaccgcttcctggtgcggagga 184
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 185 ccaagagccagttcaacgccgtgatcctgaagcggctcttcatgagcaagacaaaccggc 244
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct: 245 cgccgctctcgatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctg 304
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
|||| ||||||||| | ||||| ||| ||||| || |||| | || || ||||||||
Sbjct: 305 tgatcgtgggcaccatcaccgatgaccagagggtctacgagatacccgcaatgaaggtgg 364
Query: 370 gcgcgctcaggttc 383
|||||||||||||
Sbjct: 365 ccgcgctcaggttc 378
>gb|CV058145.1|CV058145 BNEL34g9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL34g9 5' similar to putative
cytoplasmic ribosomal protein L18, mRNA sequence
Length = 586
Score = 329 bits (166), Expect = 9e-089
Identities = 343/401 (85%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 236 caagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaaggg 295
|||||| ||||| |||||||||||||||||||||||||||||||||||| | || ||||
Sbjct: 585 caagacaaaccgnccgccgctctcgatgcgccgcctcgtcaggttcatgaatgg-aaggc 527
Query: 296 tgatcagatcgccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgcc 355
|| ||||||| ||||| ||||||||| | ||||| ||| ||||| || |||| | ||
Sbjct: 526 ggacaagatcgctgtgatcgtgggcaccatcaccgatgaccagagggtctacgagatacc 467
Query: 356 ggcgatgaaggtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgc 415
||| |||||||| ||||||||||||||| ||||| |||||||||||||| |||| ||
Sbjct: 466 ggcaatgaaggtggccgcgctcaggttcaccgagacggcgagggccaggattgtcaacgc 407
Query: 416 tggcggagagtgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacac 475
||| || |||||||| ||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 406 tggtggcgagtgccttacctttgaccagctcgccctccgtgctccgcttggacagaacac 347
Query: 476 ggttctgctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcacc 535
| |||| ||||||||||| |||||||| ||||||||||| |||||||| || || ||
Sbjct: 346 gcttctcctgaggggtcccaagaacgccagggaagctgttaggcactttggcaaagctcc 287
Query: 536 aggagtgcctcacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaa 595
||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||| || |||||
Sbjct: 286 aggagtgccacacagccacaccaagccatatgtccgctccaagggcaggaaattcgagaa 227
Query: 596 ggcgagaggaaggaggaacagcaggggcttcaaggtctaag 636
||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 226 ggcaagaggaaggaggaacagcaggggcttcaaggtttaag 186
>gb|BQ665241.1|BQ665241 HX02L09u HX Hordeum vulgare subsp. vulgare cDNA clone HX02L09
3-PRIME, mRNA sequence
Length = 577
Score = 319 bits (161), Expect = 9e-086
Identities = 323/377 (85%)
Strand = Plus / Minus
Query: 260 gatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtggg 319
||||||||||||||||||||||||||| ||||||| || ||||||| ||||| |||||
Sbjct: 577 gatgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtgatcgtggg 518
Query: 320 caccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcag 379
|||| | ||||| ||| ||||| || |||| | ||||| |||||||| |||||||||
Sbjct: 517 caccatcaccgatgaccagagggtctacgagataccggcaatgaaggtggccgcgctcag 458
Query: 380 gttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcga 439
|||||| ||||| |||||||||||||| |||| ||||| || |||||||| ||||| ||
Sbjct: 457 gttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgccttacctttga 398
Query: 440 ccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaa 499
||||||||| |||||||| || ||||| || |||||| |||| ||||||||||| |||||
Sbjct: 397 ccagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtcccaagaa 338
Query: 500 cgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaa 559
||| ||||||||||| |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 337 cgccagggaagctgttaggcactttggcaaagctccaggagtgccacacagccacaccaa 278
Query: 560 gccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcag 619
||| ||||| ||||| ||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 277 gccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggaggaacagcag 218
Query: 620 gggcttcaaggtctaag 636
|||||||||||| ||||
Sbjct: 217 gggcttcaaggtttaag 201
>gb|BQ665390.1|BQ665390 HX03G08u HX Hordeum vulgare subsp. vulgare cDNA clone HX03G08
3-PRIME, mRNA sequence
Length = 576
Score = 317 bits (160), Expect = 3e-085
Identities = 322/376 (85%)
Strand = Plus / Minus
Query: 261 atgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtgggc 320
|||||||||||||||||||||||||| ||||||| || ||||||| ||||| ||||||
Sbjct: 576 atgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtgatcgtgggc 517
Query: 321 accgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcagg 380
||| | ||||| ||| ||||| || |||| | ||||| |||||||| ||||||||||
Sbjct: 516 accatcaccgatgaccagagggtctacgagataccggcaatgaaggtggccgcgctcagg 457
Query: 381 ttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgac 440
||||| ||||| |||||||||||||| |||| ||||| || |||||||| ||||| |||
Sbjct: 456 ttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgccttacctttgac 397
Query: 441 cagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaac 500
|||||||| |||||||| || ||||| || |||||| |||| ||||||||||| ||||||
Sbjct: 396 cagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtcccaagaac 337
Query: 501 gctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaag 560
|| ||||||||||| |||||||| || || ||||||||||| |||||||||||||||
Sbjct: 336 gccagggaagctgttaggcactttggcaaagctccaggagtgccacacagccacaccaag 277
Query: 561 ccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcagg 620
|| ||||| ||||| ||||| ||||| || |||||||| |||||||||||||||||||||
Sbjct: 276 ccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggaggaacagcagg 217
Query: 621 ggcttcaaggtctaag 636
||||||||||| ||||
Sbjct: 216 ggcttcaaggtttaag 201
>gb|CB876406.1|CB876406 HX11C24w HX Hordeum vulgare subsp. vulgare cDNA clone HX11C24
3-PRIME, mRNA sequence
Length = 577
Score = 317 bits (160), Expect = 3e-085
Identities = 322/376 (85%)
Strand = Plus / Minus
Query: 261 atgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtgggc 320
|||||||||||||||||||||||||| ||||||| || ||||||| ||||| ||||||
Sbjct: 577 atgcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtgatcgtgggc 518
Query: 321 accgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcagg 380
||| | ||||| ||| ||||| || |||| | ||||| |||||||| ||||||||||
Sbjct: 517 accatcaccgatgaccagagggtctacgagataccggcaatgaaggtggccgcgctcagg 458
Query: 381 ttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgac 440
||||| ||||| |||||||||||||| |||| ||||| || |||||||| ||||| |||
Sbjct: 457 ttcaccgagacggcgagggccaggattgtcaacgctggtggcgagtgccttacctttgac 398
Query: 441 cagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaac 500
|||||||| |||||||| || ||||| || |||||| |||| ||||||||||| ||||||
Sbjct: 397 cagctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtcccaagaac 338
Query: 501 gctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaag 560
|| ||||||||||| |||||||| || || ||||||||||| |||||||||||||||
Sbjct: 337 gccagggaagctgttaggcactttggcaaagctccaggagtgccacacagccacaccaag 278
Query: 561 ccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcagg 620
|| ||||| ||||| ||||| ||||| || |||||||| |||||||||||||||||||||
Sbjct: 277 ccatatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggaggaacagcagg 218
Query: 621 ggcttcaaggtctaag 636
||||||||||| ||||
Sbjct: 217 ggcttcaaggtttaag 202
>gb|CV054900.1|CV054900 BNEL114e7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL114e7 5' similar to putative
cytoplasmic ribosomal protein L18, mRNA sequence
Length = 555
Score = 313 bits (158), Expect = 5e-084
Identities = 320/374 (85%)
Strand = Plus / Plus
Query: 263 gcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtgggcac 322
|||||||||||||||||||||||| ||||||| || ||||||| ||||| ||||||||
Sbjct: 1 gcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtgatcgtgggcac 60
Query: 323 cgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggtt 382
| | ||||| ||| ||||| || |||| | ||||| |||||||| ||||||||||||
Sbjct: 61 catcaccgatgaccagagggtctacgagataccggcaatgaaggtggccgcgctcaggtt 120
Query: 383 cactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgacca 442
||| ||||| |||||||||||||| |||| ||||| || |||||||| ||||| |||||
Sbjct: 121 caccgagacggcgagggccaggattgtcaacgctggtggcgagtgccttacctttgacca 180
Query: 443 gctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaacgc 502
|||||| |||||||| || ||||| || |||||| |||| ||||||||||| ||||||||
Sbjct: 181 gctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtcccaagaacgc 240
Query: 503 tagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaagcc 562
||||||||||| |||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 241 cagggaagctgttaggcactttggcaaagctccaggagtgccacacagccacaccaagcc 300
Query: 563 ttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcagggg 622
||||| ||||| ||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 301 atatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggaggaacagcagggg 360
Query: 623 cttcaaggtctaag 636
||||||||| ||||
Sbjct: 361 cttcaaggtttaag 374
>gb|CV055276.1|CV055276 BNEL118g4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL118g4 5' similar to putative
cytoplasmic ribosomal protein L18, mRNA sequence
Length = 487
Score = 313 bits (158), Expect = 5e-084
Identities = 320/374 (85%)
Strand = Plus / Plus
Query: 263 gcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtgggcac 322
|||||||||||||||||||||||| ||||||| || ||||||| ||||| ||||||||
Sbjct: 1 gcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtgatcgtgggcac 60
Query: 323 cgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggtt 382
| | ||||| ||| ||||| || |||| | ||||| |||||||| ||||||||||||
Sbjct: 61 catcaccgatgaccagagggtctacgagataccggcaatgaaggtggccgcgctcaggtt 120
Query: 383 cactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgacca 442
||| ||||| |||||||||||||| |||| ||||| || |||||||| ||||| |||||
Sbjct: 121 caccgagacggcgagggccaggattgtcaacgctggtggcgagtgccttacctttgacca 180
Query: 443 gctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaacgc 502
|||||| |||||||| || ||||| || |||||| |||| ||||||||||| ||||||||
Sbjct: 181 gctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtcccaagaacgc 240
Query: 503 tagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaagcc 562
||||||||||| |||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 241 cagggaagctgttaggcactttggcaaagctccaggagtgccacacagccacaccaagcc 300
Query: 563 ttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcagggg 622
||||| ||||| ||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 301 atatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggaggaacagcagggg 360
Query: 623 cttcaaggtctaag 636
||||||||| ||||
Sbjct: 361 cttcaaggtttaag 374
>gb|CV059910.1|CV059910 BNEL52c4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL52c4 5' similar to putative
cytoplasmic ribosomal protein L18, mRNA sequence
Length = 555
Score = 313 bits (158), Expect = 5e-084
Identities = 320/374 (85%)
Strand = Plus / Plus
Query: 263 gcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtgggcac 322
|||||||||||||||||||||||| ||||||| || ||||||| ||||| ||||||||
Sbjct: 1 gcgccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtgatcgtgggcac 60
Query: 323 cgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggtt 382
| | ||||| ||| ||||| || |||| | ||||| |||||||| ||||||||||||
Sbjct: 61 catcaccgatgaccagagggtctacgagataccggcaatgaaggtggccgcgctcaggtt 120
Query: 383 cactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgacca 442
||| ||||| |||||||||||||| |||| ||||| || |||||||| ||||| |||||
Sbjct: 121 caccgagacggcgagggccaggattgtcaacgctggtggcgagtgccttacctttgacca 180
Query: 443 gctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaacgc 502
|||||| |||||||| || ||||| || |||||| |||| ||||||||||| ||||||||
Sbjct: 181 gctcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtcccaagaacgc 240
Query: 503 tagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaagcc 562
||||||||||| |||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 241 cagggaagctgttaggcactttggcaaagctccaggagtgccacacagccacaccaagcc 300
Query: 563 ttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcagggg 622
||||| ||||| ||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 301 atatgtccgctccaagggcaggaaattcgagaaggcaagaggaaggaggaacagcagggg 360
Query: 623 cttcaaggtctaag 636
||||||||| ||||
Sbjct: 361 cttcaaggtttaag 374
>gb|BQ657044.1|BQ657044 HA09O18u HA Hordeum vulgare subsp. vulgare cDNA clone HA09O18
3-PRIME, mRNA sequence
Length = 573
Score = 309 bits (156), Expect = 8e-083
Identities = 318/372 (85%)
Strand = Plus / Minus
Query: 265 gccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtgggcaccg 324
|||||||||||||||||||||| ||||||| || ||||||| ||||| |||||||||
Sbjct: 573 gccgcctcgtcaggttcatggatgggaaggcggacaagatcgctgtgatcgtgggcacca 514
Query: 325 tgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttca 384
| ||||| ||| ||||| || |||| | ||||| |||||||| ||||||||||||||
Sbjct: 513 tcaccgatgaccagagggtctacgagataccggcaatgaaggtggccgcgctcaggttca 454
Query: 385 ctgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgaccagc 444
| ||||| |||||||||||||| |||| ||||| || |||||||| ||||| |||||||
Sbjct: 453 ccgagacggcgagggccaggattgtcaacgctggtggcgagtgccttacctttgaccagc 394
Query: 445 tcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaacgcta 504
|||| |||||||| || ||||| || |||||| |||| ||||||||||| |||||||| |
Sbjct: 393 tcgccctccgtgctccgcttggacagaacacgcttctcctgaggggtcccaagaacgcca 334
Query: 505 gggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaagcctt 564
|||||||||| |||||||| || || ||||||||||| ||||||||||||||||| |
Sbjct: 333 gggaagctgttaggcactttggcaaagctccaggagtgccacacagccacaccaagccat 274
Query: 565 atgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggct 624
|||| ||||| ||||| ||||| || |||||||| |||||||||||||||||||||||||
Sbjct: 273 atgtccgctccaagggcaggaaattcgagaaggcaagaggaaggaggaacagcaggggct 214
Query: 625 tcaaggtctaag 636
||||||| ||||
Sbjct: 213 tcaaggtttaag 202
>gb|BQ657440.1|BQ657440 HA08G03u HA Hordeum vulgare subsp. vulgare cDNA clone HA08G03
3-PRIME, mRNA sequence
Length = 562
Score = 289 bits (146), Expect = 8e-077
Identities = 308/362 (85%)
Strand = Plus / Minus
Query: 275 caggttcatggaggggaagggtgatcagatcgccgtgattgtgggcaccgtgaccgacga 334
|||||||||||| ||||||| || ||||||| ||||| ||||||||| | ||||| ||
Sbjct: 562 caggttcatggatgggaaggcggacaagatcgctgtgatcgtgggcaccatcaccgatga 503
Query: 335 caagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgagacagc 394
| ||||| || |||| | ||||| |||||||| ||||||||||||||| ||||| ||
Sbjct: 502 ccagagggtctacgagataccggcaatgaaggtggccgcgctcaggttcaccgagacggc 443
Query: 395 gagggccaggatcatcaatgctggcggagagtgcctcaccttcgaccagctcgcgctccg 454
|||||||||||| |||| ||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 442 gagggccaggattgtcaacgctggtggcgagtgccttacctttgaccagctcgccctccg 383
Query: 455 tgccccacttgggcaaaacacggttctgctgaggggtcctaagaacgctagggaagctgt 514
||| || ||||| || |||||| |||| ||||||||||| |||||||| |||||||||||
Sbjct: 382 tgctccgcttggacagaacacgcttctcctgaggggtcccaagaacgccagggaagctgt 323
Query: 515 caggcacttcgggcctgcaccaggagtgcctcacagccacaccaagccttatgttcgctc 574
|||||||| || || ||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 322 taggcactttggcaaagctccaggagtgccacacagccacaccaagccatatgtccgctc 263
Query: 575 gaagggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggcttcaaggtcta 634
||||| ||||| || |||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 262 caagggcaggaaattcgagaaggcaagaggaaggaggaacagcaggggcttcaaggttta 203
Query: 635 ag 636
||
Sbjct: 202 ag 201
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 103,489
Number of Sequences: 312970
Number of extensions: 103489
Number of successful extensions: 32753
Number of sequences better than 0.5: 259
Number of HSP's better than 0.5 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32047
Number of HSP's gapped (non-prelim): 619
length of query: 877
length of database: 175,134,539
effective HSP length: 19
effective length of query: 858
effective length of database: 169,188,109
effective search space: 145163397522
effective search space used: 145163397522
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)