BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192958.2.1
(1629 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE559324.1|BE559324 HV_CEb0024B22f Hordeum vulgare seedl... 593 e-168
gb|BU983194.1|BU983194 HA28N18r HA Hordeum vulgare subsp. v... 585 e-165
gb|CA013492.1|CA013492 HT08K04r HT Hordeum vulgare subsp. v... 563 e-159
gb|BQ767061.1|BQ767061 EBro08_SQ007_I24_R root, 3 week, dro... 545 e-153
gb|AV932975.1|AV932975 AV932975 K. Sato unpublished cDNA li... 541 e-152
gb|BI776717.2|BI776717 EBpi07_SQ001_I13_R pistil, 12 DPA, n... 541 e-152
gb|BJ547556.1|BJ547556 BJ547556 K. Sato unpublished cDNA li... 541 e-152
gb|AL507668.1|AL507668 AL507668 Hordeum vulgare Barke devel... 539 e-152
gb|AV926309.1|AV926309 AV926309 K. Sato unpublished cDNA li... 537 e-151
gb|BJ547080.1|BJ547080 BJ547080 K. Sato unpublished cDNA li... 537 e-151
gb|AV924641.1|AV924641 AV924641 K. Sato unpublished cDNA li... 531 e-149
gb|CA002177.1|CA002177 HS06L24r HS Hordeum vulgare subsp. v... 527 e-148
gb|BF265760.2|BF265760 HV_CEa0013E07f Hordeum vulgare seedl... 521 e-146
gb|BJ547588.1|BJ547588 BJ547588 K. Sato unpublished cDNA li... 515 e-144
gb|CA003896.1|CA003896 HS15P12r HS Hordeum vulgare subsp. v... 504 e-141
gb|BJ547294.1|BJ547294 BJ547294 K. Sato unpublished cDNA li... 486 e-135
gb|CB877624.1|CB877624 HP05J18T HP Hordeum vulgare subsp. v... 474 e-132
gb|CA017990.1|CA017990 HV07B06r HV Hordeum vulgare subsp. v... 460 e-128
gb|CA007094.1|CA007094 HU06L13r HU Hordeum vulgare subsp. v... 458 e-127
gb|AL506148.1|AL506148 AL506148 Hordeum vulgare Barke devel... 418 e-115
gb|BM370867.2|BM370867 EBro04_SQ002_J15_R root, 3 week, sal... 414 e-114
gb|CA003209.1|CA003209 HS09L24r HS Hordeum vulgare subsp. v... 408 e-112
gb|BF265966.2|BF265966 HV_CEa0013M21f Hordeum vulgare seedl... 392 e-107
gb|CA027461.1|CA027461 HZ58P24r HZ Hordeum vulgare subsp. v... 392 e-107
gb|CA023375.1|CA023375 HZ46A15r HZ Hordeum vulgare subsp. v... 391 e-107
gb|CA002173.1|CA002173 HS06L19r HS Hordeum vulgare subsp. v... 389 e-106
gb|BQ765166.1|BQ765166 EBro03_SQ006_N12_R root, 3 week, wat... 381 e-104
gb|BI955028.1|BI955028 HVSMEm0020O14f Hordeum vulgare green... 369 e-100
gb|CB859966.1|CB859966 HI12C19w HI Hordeum vulgare subsp. v... 363 1e-098
gb|CB878788.1|CB878788 HP09M21T HP Hordeum vulgare subsp. v... 363 1e-098
gb|BJ458979.1|BJ458979 BJ458979 K. Sato unpublished cDNA li... 359 2e-097
gb|BQ754405.1|BQ754405 EBca01_SQ003_N18_R carpel, pre-anthe... 355 3e-096
gb|AV918185.1|AV918185 AV918185 K. Sato unpublished cDNA li... 345 3e-093
gb|AV935618.1|AV935618 AV935618 K. Sato unpublished cDNA li... 345 3e-093
gb|BJ547912.1|BJ547912 BJ547912 K. Sato unpublished cDNA li... 345 3e-093
gb|BJ548555.1|BJ548555 BJ548555 K. Sato unpublished cDNA li... 345 3e-093
gb|BJ548639.1|BJ548639 BJ548639 K. Sato unpublished cDNA li... 345 3e-093
gb|BJ549776.1|BJ549776 BJ549776 K. Sato unpublished cDNA li... 345 3e-093
gb|BJ549828.1|BJ549828 BJ549828 K. Sato unpublished cDNA li... 345 3e-093
gb|BJ549026.1|BJ549026 BJ549026 K. Sato unpublished cDNA li... 339 2e-091
gb|BF616622.2|BF616622 HVSMEc0010N09f Hordeum vulgare seedl... 337 7e-091
gb|AV918791.1|AV918791 AV918791 K. Sato unpublished cDNA li... 331 4e-089
gb|AV931194.1|AV931194 AV931194 K. Sato unpublished cDNA li... 331 4e-089
gb|AV932812.1|AV932812 AV932812 K. Sato unpublished cDNA li... 331 4e-089
gb|BJ451484.1|BJ451484 BJ451484 K. Sato unpublished cDNA li... 331 4e-089
gb|AV913493.1|AV913493 AV913493 K. Sato unpublished cDNA li... 329 2e-088
gb|BF616389.2|BF616389 HVSMEc0007C16f Hordeum vulgare seedl... 327 7e-088
gb|AV936347.1|AV936347 AV936347 K. Sato unpublished cDNA li... 325 3e-087
gb|BJ548460.1|BJ548460 BJ548460 K. Sato unpublished cDNA li... 325 3e-087
gb|BJ548534.1|BJ548534 BJ548534 K. Sato unpublished cDNA li... 325 3e-087
gb|BE193876.2|BE193876 HVSMEh0082M09f Hordeum vulgare 5-45 ... 323 1e-086
gb|AV918501.1|AV918501 AV918501 K. Sato unpublished cDNA li... 323 1e-086
gb|AV918750.1|AV918750 AV918750 K. Sato unpublished cDNA li... 323 1e-086
gb|AV935440.1|AV935440 AV935440 K. Sato unpublished cDNA li... 323 1e-086
gb|AV913207.1|AV913207 AV913207 K. Sato unpublished cDNA li... 321 4e-086
gb|AV913448.1|AV913448 AV913448 K. Sato unpublished cDNA li... 321 4e-086
gb|AV923044.1|AV923044 AV923044 K. Sato unpublished cDNA li... 319 2e-085
gb|AV923699.1|AV923699 AV923699 K. Sato unpublished cDNA li... 319 2e-085
gb|AV926156.1|AV926156 AV926156 K. Sato unpublished cDNA li... 319 2e-085
gb|BJ549392.1|BJ549392 BJ549392 K. Sato unpublished cDNA li... 317 6e-085
gb|BJ548050.1|BJ548050 BJ548050 K. Sato unpublished cDNA li... 315 3e-084
gb|BE194325.1|BE194325 HVSMEh0085C11f Hordeum vulgare 5-45 ... 309 2e-082
gb|AV936006.1|AV936006 AV936006 K. Sato unpublished cDNA li... 309 2e-082
gb|AV913049.1|AV913049 AV913049 K. Sato unpublished cDNA li... 307 6e-082
gb|AV933573.1|AV933573 AV933573 K. Sato unpublished cDNA li... 307 6e-082
gb|BJ471254.1|BJ471254 BJ471254 K. Sato unpublished cDNA li... 307 6e-082
gb|BJ547299.1|BJ547299 BJ547299 K. Sato unpublished cDNA li... 307 6e-082
gb|BQ758588.1|BQ758588 EBma07_SQ002_O03_R maternal, 21 DPA,... 305 2e-081
gb|AV914052.1|AV914052 AV914052 K. Sato unpublished cDNA li... 303 1e-080
gb|AV934096.1|AV934096 AV934096 K. Sato unpublished cDNA li... 301 4e-080
gb|BM370320.2|BM370320 EBro08_SQ003_N09_R root, 3 week, dro... 299 2e-079
gb|AV917803.1|AV917803 AV917803 K. Sato unpublished cDNA li... 297 6e-079
gb|AV929735.1|AV929735 AV929735 K. Sato unpublished cDNA li... 297 6e-079
gb|AV916937.1|AV916937 AV916937 K. Sato unpublished cDNA li... 295 2e-078
gb|AV919081.1|AV919081 AV919081 K. Sato unpublished cDNA li... 295 2e-078
gb|AV915331.1|AV915331 AV915331 K. Sato unpublished cDNA li... 293 9e-078
gb|CB874739.1|CB874739 HX06C21w HX Hordeum vulgare subsp. v... 293 9e-078
gb|BU999535.1|BU999535 HI14M21r HI Hordeum vulgare subsp. v... 289 1e-076
gb|BJ547221.1|BJ547221 BJ547221 K. Sato unpublished cDNA li... 287 6e-076
gb|AV921881.1|AV921881 AV921881 K. Sato unpublished cDNA li... 278 6e-073
gb|BJ549059.1|BJ549059 BJ549059 K. Sato unpublished cDNA li... 278 6e-073
gb|AV925669.1|AV925669 AV925669 K. Sato unpublished cDNA li... 276 2e-072
gb|CA027563.1|CA027563 HZ59F03r HZ Hordeum vulgare subsp. v... 276 2e-072
gb|BM817108.1|BM817108 HC02A07_T3.ab1 HC Hordeum vulgare su... 274 9e-072
gb|BJ456136.1|BJ456136 BJ456136 K. Sato unpublished cDNA li... 274 9e-072
gb|CA000804.1|CA000804 HS06L19u HS Hordeum vulgare subsp. v... 270 1e-070
gb|BQ756054.1|BQ756054 EBem05_SQ001_H16_R embryo, 14 DPA, n... 254 8e-066
gb|BU998787.1|BU998787 HI12C19r HI Hordeum vulgare subsp. v... 254 8e-066
gb|AJ435921.1|AJ435921 AJ435921 S00002 Hordeum vulgare subs... 244 8e-063
gb|BF624632.2|BF624632 HVSMEa0017F04f Hordeum vulgare seedl... 242 3e-062
gb|BE195094.1|BE195094 HVSMEh0088E12f Hordeum vulgare 5-45 ... 242 3e-062
gb|BF627842.2|BF627842 HVSMEb0005P05f Hordeum vulgare seedl... 242 3e-062
gb|CA027458.1|CA027458 HZ58P20r HZ Hordeum vulgare subsp. v... 236 2e-060
gb|AL507036.1|AL507036 AL507036 Hordeum vulgare Barke devel... 234 7e-060
gb|AL507613.1|AL507613 AL507613 Hordeum vulgare Barke devel... 234 7e-060
gb|AL509560.1|AL509560 AL509560 Hordeum vulgare Barke devel... 234 7e-060
gb|BF065487.1|BF065487 HV_CEb0012J03f Hordeum vulgare seedl... 234 7e-060
gb|BQ460661.1|BQ460661 HA06E17r HA Hordeum vulgare subsp. v... 234 7e-060
gb|CA002853.1|CA002853 HS08L13r HS Hordeum vulgare subsp. v... 234 7e-060
gb|CA003536.1|CA003536 HS14M16r HS Hordeum vulgare subsp. v... 234 7e-060
gb|CA009497.1|CA009497 HU14E17r HU Hordeum vulgare subsp. v... 234 7e-060
gb|CA018123.1|CA018123 HV07J04r HV Hordeum vulgare subsp. v... 234 7e-060
gb|CA018856.1|CA018856 HV09N19r HV Hordeum vulgare subsp. v... 234 7e-060
gb|CA019760.1|CA019760 HV13A11r HV Hordeum vulgare subsp. v... 234 7e-060
gb|CA020023.1|CA020023 HV14B22r HV Hordeum vulgare subsp. v... 234 7e-060
gb|CV059013.1|CV059013 BNEL43d7 Barley EST endosperm librar... 234 7e-060
gb|CA020250.1|CA020250 HV14M06r HV Hordeum vulgare subsp. v... 232 3e-059
gb|AL511322.1|AL511322 AL511322 Hordeum vulgare Barke devel... 228 5e-058
gb|BQ468361.1|BQ468361 HM01A19T HM Hordeum vulgare subsp. v... 226 2e-057
gb|BM442619.2|BM442619 EBan01_SQ003_L01_R anther, yellow st... 220 1e-055
gb|BQ764206.1|BQ764206 EBan01_SQ005_M06_R anther, yellow st... 220 1e-055
gb|CB882786.1|CB882786 HL02N12w HL Hordeum vulgare subsp. v... 220 1e-055
gb|AL510951.1|AL510951 AL510951 Hordeum vulgare Barke devel... 218 4e-055
gb|BU988719.1|BU988719 HF18H21r HF Hordeum vulgare subsp. v... 212 3e-053
gb|CA031428.1|CA031428 HX09O18r HX Hordeum vulgare subsp. v... 210 1e-052
gb|BI781165.2|BI781165 EBma03_SQ001_K06_R maternal, 8 DPA, ... 202 3e-050
gb|BJ549377.1|BJ549377 BJ549377 K. Sato unpublished cDNA li... 202 3e-050
gb|BQ754331.1|BQ754331 EBca01_SQ003_J15_R carpel, pre-anthe... 196 2e-048
gb|BG367410.1|BG367410 HVSMEi0012C18f Hordeum vulgare 20 DA... 194 6e-048
gb|BI949923.1|BI949923 HVSMEl0016P24f Hordeum vulgare spike... 194 6e-048
gb|BI947010.1|BI947010 HVSMEl0003D06f Hordeum vulgare spike... 188 4e-046
gb|BI947601.1|BI947601 HVSMEl0006A21f Hordeum vulgare spike... 188 4e-046
gb|BE196549.2|BE196549 HVSMEh0092J17f Hordeum vulgare 5-45 ... 186 2e-045
gb|BM369466.2|BM369466 EBem07_SQ003_K18_R embryo, 28 DPA, n... 186 2e-045
gb|AL504114.1|AL504114 AL504114 Hordeum vulgare Barke roots... 184 6e-045
gb|BQ754039.1|BQ754039 EBca01_SQ002_K06_R carpel, pre-anthe... 184 6e-045
gb|BE420930.1|BE420930 HWM004.A07 ITEC HWM Barley Leaf Libr... 178 4e-043
gb|BF625733.2|BF625733 HVSMEa0013G20f Hordeum vulgare seedl... 178 4e-043
gb|BQ459152.1|BQ459152 HA02C15r HA Hordeum vulgare subsp. v... 178 4e-043
gb|BE421001.1|BE421001 HWM004.G06 ITEC HWM Barley Leaf Libr... 176 2e-042
gb|BG310064.1|BG310064 HVSMEc0016D22f Hordeum vulgare seedl... 176 2e-042
gb|BF262852.2|BF262852 HV_CEa0005C06f Hordeum vulgare seedl... 176 2e-042
gb|BQ470470.1|BQ470470 HX03B07r HX Hordeum vulgare subsp. v... 176 2e-042
gb|CA030030.1|CA030030 HX05O04r HX Hordeum vulgare subsp. v... 176 2e-042
gb|AL501450.1|AL501450 AL501450 Hordeum vulgare Barke roots... 168 4e-040
gb|BQ761673.1|BQ761673 EBem10_SQ001_B18_R embryo, 2 Day ger... 168 4e-040
gb|BI948387.1|BI948387 HVSMEl0009F14f Hordeum vulgare spike... 165 6e-039
gb|BJ447003.1|BJ447003 BJ447003 K. Sato unpublished cDNA li... 165 6e-039
gb|BG365674.1|BG365674 HVSMEi0003L07f Hordeum vulgare 20 DA... 163 2e-038
gb|CA024539.1|CA024539 HZ49J12r HZ Hordeum vulgare subsp. v... 163 2e-038
gb|BQ460041.1|BQ460041 HA07G07r HA Hordeum vulgare subsp. v... 161 9e-038
gb|BU967531.1|BU967531 HB04J15r BC Hordeum vulgare subsp. v... 161 9e-038
gb|BU987917.1|BU987917 HF16C03r HF Hordeum vulgare subsp. v... 161 9e-038
gb|BU988005.1|BU988005 HF16G10r HF Hordeum vulgare subsp. v... 161 9e-038
gb|BF266282.2|BF266282 HV_CEa0014L02f Hordeum vulgare seedl... 159 4e-037
gb|BU986529.1|BU986529 HF12C06r HF Hordeum vulgare subsp. v... 159 4e-037
gb|BU988955.1|BU988955 HF19E06r HF Hordeum vulgare subsp. v... 159 4e-037
gb|CB875982.1|CB875982 HX09O18w HX Hordeum vulgare subsp. v... 153 2e-035
gb|AV930296.1|AV930296 AV930296 K. Sato unpublished cDNA li... 149 3e-034
gb|BF261461.2|BF261461 HV_CEa0001F14f Hordeum vulgare seedl... 147 1e-033
gb|BQ664293.1|BQ664293 HV02L16u HV Hordeum vulgare subsp. v... 147 1e-033
gb|BQ665339.1|BQ665339 HX03B07u HX Hordeum vulgare subsp. v... 147 1e-033
gb|CA014051.1|CA014051 HT10E01r HT Hordeum vulgare subsp. v... 143 2e-032
gb|BJ448413.1|BJ448413 BJ448413 K. Sato unpublished cDNA li... 135 5e-030
gb|CA032014.1|CA032014 HX11M05r HX Hordeum vulgare subsp. v... 131 8e-029
gb|BU971318.1|BU971318 HB17E08r BC Hordeum vulgare subsp. v... 127 1e-027
gb|BU998754.1|BU998754 HI12B03r HI Hordeum vulgare subsp. v... 127 1e-027
gb|AJ462891.1|AJ462891 AJ462891 S00002 Hordeum vulgare subs... 123 2e-026
gb|BI953415.1|BI953415 HVSMEm0012J14f Hordeum vulgare green... 121 8e-026
gb|BU967401.1|BU967401 HB04D03r BC Hordeum vulgare subsp. v... 121 8e-026
gb|BF065913.3|BF065913 HV_CEb0014F12f Hordeum vulgare seedl... 119 3e-025
gb|BU987246.1|BU987246 HF14D12r HF Hordeum vulgare subsp. v... 119 3e-025
gb|BF267676.2|BF267676 HV_CEa0018J08f Hordeum vulgare seedl... 111 7e-023
gb|CB859939.1|CB859939 HI12B03w HI Hordeum vulgare subsp. v... 111 7e-023
gb|BU978653.1|BU978653 HA13N23r HA Hordeum vulgare subsp. v... 109 3e-022
gb|CA017133.1|CA017133 HV14M06u HV Hordeum vulgare subsp. v... 101 7e-020
gb|BU986091.1|BU986091 HF09K01r HF Hordeum vulgare subsp. v... 94 2e-017
gb|AJ462890.1|AJ462890 AJ462890 S00002 Hordeum vulgare subs... 78 1e-012
gb|BU974841.1|BU974841 HB29E10r BC Hordeum vulgare subsp. v... 76 4e-012
gb|BJ547884.1|BJ547884 BJ547884 K. Sato unpublished cDNA li... 72 6e-011
gb|CA000372.1|CA000372 HS08L13u HS Hordeum vulgare subsp. v... 70 3e-010
gb|BJ548203.1|BJ548203 BJ548203 K. Sato unpublished cDNA li... 68 1e-009
gb|AV925145.1|AV925145 AV925145 K. Sato unpublished cDNA li... 64 2e-008
gb|BM372960.1|BM372960 EBma04_SQ002_J01_R maternal, 10 DPA,... 60 2e-007
gb|BJ455006.1|BJ455006 BJ455006 K. Sato unpublished cDNA li... 60 2e-007
gb|BU973690.1|BU973690 HB25L17r BC Hordeum vulgare subsp. v... 60 2e-007
gb|BG309549.1|BG309549 HVSMEc0011A02f Hordeum vulgare seedl... 54 1e-005
gb|BG344813.2|BG344813 HVSMEg0016C23f Hordeum vulgare pre-a... 54 1e-005
gb|BQ467353.1|BQ467353 HS03H23r HS Hordeum vulgare subsp. v... 54 1e-005
gb|BG365672.1|BG365672 HVSMEi0003L05f Hordeum vulgare 20 DA... 50 2e-004
gb|BE216076.2|BE216076 HV_CEb0009F11f Hordeum vulgare seedl... 50 2e-004
gb|AV913940.1|AV913940 AV913940 K. Sato unpublished cDNA li... 50 2e-004
gb|BQ662213.1|BQ662213 HS01B18w HS Hordeum vulgare subsp. v... 50 2e-004
gb|CD662734.1|CD662734 UCRHV18_02dg12_b1 Drought-stressed D... 50 2e-004
gb|AL500264.1|AL500264 AL500264 Hordeum vulgare Barke etiol... 48 0.001
gb|AL510614.1|AL510614 AL510614 Hordeum vulgare Barke devel... 48 0.001
gb|BF259025.2|BF259025 HVSMEf0017H02f Hordeum vulgare seedl... 48 0.001
gb|BF257366.3|BF257366 HVSMEf0012L04f Hordeum vulgare seedl... 48 0.001
gb|AV927479.1|AV927479 AV927479 K. Sato unpublished cDNA li... 48 0.001
gb|AV934648.1|AV934648 AV934648 K. Sato unpublished cDNA li... 48 0.001
gb|AV936843.1|AV936843 AV936843 K. Sato unpublished cDNA li... 48 0.001
gb|BQ467403.1|BQ467403 HS03K10r HS Hordeum vulgare subsp. v... 48 0.001
gb|BQ662690.1|BQ662690 HS03K23u HS Hordeum vulgare subsp. v... 48 0.001
gb|BQ665984.1|BQ665984 HZ01M10u HZ Hordeum vulgare subsp. v... 48 0.001
gb|BM368741.2|BM368741 EBem08_SQ004_H16_R embryo, 40 DPA, n... 48 0.001
gb|BM371524.2|BM371524 EBma08_SQ003_B03_R maternal, 28 DPA,... 48 0.001
gb|BM374239.2|BM374239 EBpi03_SQ003_B01_R pistil, 4 DPA, no... 48 0.001
gb|BQ763089.1|BQ763089 EBro02_SQ007_L03_R root, 3 week, hyd... 48 0.001
gb|BU996447.1|BU996447 HM13K09r HM Hordeum vulgare subsp. v... 48 0.001
gb|CA012322.1|CA012322 HT05B17r HT Hordeum vulgare subsp. v... 48 0.001
gb|CA014740.1|CA014740 HT12D14r HT Hordeum vulgare subsp. v... 48 0.001
gb|CA032326.1|CA032326 HX12L02r HX Hordeum vulgare subsp. v... 48 0.001
gb|CA032582.1|CA032582 HX13I12r HX Hordeum vulgare subsp. v... 48 0.001
gb|CA032830.1|CA032830 HX14F06r HX Hordeum vulgare subsp. v... 48 0.001
gb|BJ544857.1|BJ544857 BJ544857 K. Sato unpublished cDNA li... 48 0.001
gb|BJ545521.1|BJ545521 BJ545521 K. Sato unpublished cDNA li... 48 0.001
gb|BJ546339.1|BJ546339 BJ546339 K. Sato unpublished cDNA li... 48 0.001
gb|BF257618.2|BF257618 HVSMEf0013F22f Hordeum vulgare seedl... 46 0.004
gb|BF260166.2|BF260166 HVSMEf0021E13f Hordeum vulgare seedl... 46 0.004
gb|AW983459.2|AW983459 HVSMEg0010L09f Hordeum vulgare pre-a... 46 0.004
gb|BG369450.2|BG369450 HVSMEi0024H04f Hordeum vulgare 20 DA... 46 0.004
gb|BM444581.1|BM444581 EBem09_SQ005_M15_R embryo, 1 Day ger... 46 0.004
gb|BQ465243.1|BQ465243 HU03A18r HU Hordeum vulgare subsp. v... 46 0.004
gb|BM445276.2|BM445276 EBem09_SQ007_P03_R embryo, 1 Day ger... 46 0.004
gb|CA008057.1|CA008057 HU09M12r HU Hordeum vulgare subsp. v... 46 0.004
gb|CA011986.1|CA011986 HT04B17r HT Hordeum vulgare subsp. v... 46 0.004
gb|CA027033.1|CA027033 HZ57L06r HZ Hordeum vulgare subsp. v... 46 0.004
gb|BJ544004.1|BJ544004 BJ544004 K. Sato unpublished cDNA li... 46 0.004
gb|AV921554.1|AV921554 AV921554 K. Sato unpublished cDNA li... 44 0.014
gb|BQ662379.1|BQ662379 HS02B18u HS Hordeum vulgare subsp. v... 44 0.014
gb|BI777624.2|BI777624 EBro08_SQ001_A11_R root, 3 week, dro... 44 0.014
gb|CA000540.1|CA000540 HS07K15u HS Hordeum vulgare subsp. v... 44 0.014
gb|CA015912.1|CA015912 HV11G05u HV Hordeum vulgare subsp. v... 44 0.014
gb|BQ471536.1|BQ471536 HV02L16r HV Hordeum vulgare subsp. v... 42 0.057
gb|AL508070.1|AL508070 AL508070 Hordeum vulgare Barke devel... 40 0.22
gb|AL510456.1|AL510456 AL510456 Hordeum vulgare Barke devel... 40 0.22
gb|AL510900.1|AL510900 AL510900 Hordeum vulgare Barke devel... 40 0.22
gb|BF256925.2|BF256925 HVSMEf0011G06f Hordeum vulgare seedl... 40 0.22
gb|BG416772.2|BG416772 HVSMEk0014H08f Hordeum vulgare testa... 40 0.22
gb|BG416774.2|BG416774 HVSMEk0014H10f Hordeum vulgare testa... 40 0.22
gb|BG416796.2|BG416796 HVSMEk0014J04f Hordeum vulgare testa... 40 0.22
gb|CA017279.1|CA017279 HV14B22u HV Hordeum vulgare subsp. v... 40 0.22
gb|CB876590.1|CB876590 HX11M05w HX Hordeum vulgare subsp. v... 40 0.22
>gb|BE559324.1|BE559324 HV_CEb0024B22f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024B22f, mRNA sequence
Length = 938
Score = 593 bits (299), Expect = e-168
Identities = 512/581 (88%), Gaps = 7/581 (1%)
Strand = Plus / Minus
Query: 1037 cccttgcactcattgcaaggatgctgcatttgctgaatcattccagg-ccccaactgccg 1095
||| ||||||||||||| || ||||||||| ||||||||||||| || ||||| |||||
Sbjct: 689 cccntgcactcattgcagggctgctgcattngctgaatcattcctggtccccagctgcct 630
Query: 1096 gatttggaccttaaagccagaaccttggcaaccagcacacctcgatgaagctccagactt 1155
||| |||||||| | |||| ||||||||| || |||||| || ||||||||||||||
Sbjct: 629 gatctggaccttgtaaccagcaccttggcagccggcacacttcatggaagctccagactt 570
Query: 1156 tgaacccttaccattgcacttggagcagagaacactgcgggacagagagagcttctttga 1215
||||||||| ||||||||||| |||||||| ||| |||||| |||||||| ||||| ||
Sbjct: 569 tgaacccttgccattgcactttgagcagagcacattgcgggcaagagagagtttcttcga 510
Query: 1216 tgtgccattgtacaaatcctccagagaaacctttagaggatgaaccacatcctctcccct 1275
||| ||||||||||| ||||| || |||||| |||||||||||||||||||| |||||
Sbjct: 509 tgttccattgtacaactcctcaaggctaaccttcagaggatgaaccacatcctcacccct 450
Query: 1276 tcgctgccttctgcccctactgctgccaccacctccaaaagggcttccaccacca---aa 1332
||||| | |||||||| |||||||||||||||||||| ||| | ||||||||| ||
Sbjct: 449 gcgctgacgcctgcccctgctgctgccaccacctccaaaggggttgccaccaccaccaaa 390
Query: 1333 gaatgactggaatatgtcaaagggatcgtgcatccctccaccacctcccattccctcctt 1392
|||||| ||||| |||||||| ||||| ||||| |||||| |||||||||||||||||
Sbjct: 389 gaatgattggaagatgtcaaatggatcatgcat---tccaccgcctcccattccctcctt 333
Query: 1393 gagggcatcctcaccatattgatcataaatctctcgcttttcaggatcactgaggacctc 1452
|||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 332 gagggcatcctcaccatactgatcatagatctctcgcttctcaggatcactcaggacctc 273
Query: 1453 ataagcctgagctagctccttgaacttctcgggatcgccgcccttgtcggggtggttctt 1512
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 272 ataagcctgagctagttccttgaacttctcggggtcgccgcccttgtcggggtggttctt 213
Query: 1513 gatggcggccttgcggtaggccttcttgaggtcatcctgggacgcgtctttggagacccc 1572
||||||||||||||||||||||||||||||||| |||||||||||||| |||| || ||
Sbjct: 212 gatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtccttgggcacgcc 153
Query: 1573 gaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|||||||||||||| || ||| ||||||||||||||||||
Sbjct: 152 caggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 112
>gb|BU983194.1|BU983194 HA28N18r HA Hordeum vulgare subsp. vulgare cDNA clone HA28N18
5-PRIME, mRNA sequence
Length = 590
Score = 585 bits (295), Expect = e-165
Identities = 506/575 (88%), Gaps = 6/575 (1%)
Strand = Plus / Minus
Query: 1042 gcactcattgcaaggatgctgcatttgctgaatcattccaggccccaactgccggatttg 1101
|||||||||||| || |||||||||||||| |||||||| || |||| ||||| ||| ||
Sbjct: 590 gcactcattgcagggctgctgcatttgctgtatcattcctggtcccagctgcctgatctg 531
Query: 1102 gaccttaaagccagaaccttggcaaccagcacacctcgatgaagctccagactttgaacc 1161
|||||| | |||| ||||||||| || |||||| || ||||| ||||||||||||||
Sbjct: 530 gaccttgtaaccagcaccttggcagccggcacacttcatggaagccccagactttgaacc 471
Query: 1162 cttaccattgcacttggagcagagaacactgcgggacagagagagcttctttgatgtgcc 1221
||| ||||||||||| |||||||| ||| |||||| |||||||| ||||| ||||| ||
Sbjct: 470 cttgccattgcactttgagcagagcacattgcgggcaagagagagtttcttcgatgttcc 411
Query: 1222 attgtacaaatcctccagagaaacctttagaggatgaaccacatcctctccccttcgctg 1281
||||||||| ||||| || |||||| |||||||||||||||||||| ||||| |||||
Sbjct: 410 attgtacaactcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgctg 351
Query: 1282 ccttctgcccctactgctgccaccacctccaaaagggcttcc---accaccaaagaatga 1338
| |||||||| |||||||||||||||||||| ||| | || |||||||||||||||
Sbjct: 350 acgcctgcccctgctgctgccaccacctccaaaggggttgccgccaccaccaaagaatga 291
Query: 1339 ctggaatatgtcaaagggatcgtgcatccctccaccacctcccattccctccttgagggc 1398
||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 290 ttggaagatgtcaaatggatcgtgcat---tccaccacctcccattccctccttgagggc 234
Query: 1399 atcctcaccatattgatcataaatctctcgcttttcaggatcactgaggacctcataagc 1458
|||||||||||| |||||||| ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 233 atcctcaccatactgatcatagatctctcgcttctcaggatcactcaagacctcataagc 174
Query: 1459 ctgagctagctccttgaacttctcgggatcgccgcccttgtcggggtggttcttgatggc 1518
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 173 ctgagctagctccttgaacttctcggggtaaccgcccttgtcggggtggttcttgatggc 114
Query: 1519 ggccttgcggtaggccttcttgaggtcatcctgggacgcgtctttggagaccccgaggat 1578
||||||||||||||||||||||||||| |||||||||||||| |||| || || |||||
Sbjct: 113 ggccttgcggtaggccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggat 54
Query: 1579 ctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
||||||||| || ||| ||||||||||||||||||
Sbjct: 53 ctcgtagtagcgcgtgctgtcgctcttcttcggcg 19
>gb|CA013492.1|CA013492 HT08K04r HT Hordeum vulgare subsp. vulgare cDNA clone HT08K04
5-PRIME, mRNA sequence
Length = 626
Score = 563 bits (284), Expect = e-159
Identities = 480/544 (88%), Gaps = 6/544 (1%)
Strand = Plus / Minus
Query: 1073 atcattccaggccccaactgccggatttggaccttaaagccagaaccttggcaaccagca 1132
|||||||| || |||| ||||| ||| |||||||| | |||| ||||||||| || |||
Sbjct: 622 atcattcctggtcccagctgcctgatctggaccttgtaaccagcaccttggcagccggca 563
Query: 1133 cacctcgatgaagctccagactttgaacccttaccattgcacttggagcagagaacactg 1192
||| || ||||| ||||||||||||||||| ||||||||||| |||||||| ||| ||
Sbjct: 562 cacttcatggaagccccagactttgaacccttgccattgcactttgagcagagcacattg 503
Query: 1193 cgggacagagagagcttctttgatgtgccattgtacaaatcctccagagaaacctttaga 1252
|||| |||||||| ||||| ||||| ||||||||||| ||||| || |||||| |||
Sbjct: 502 cgggcaagagagagtttcttcgatgttccattgtacaactcctcaaggctaaccttcaga 443
Query: 1253 ggatgaaccacatcctctccccttcgctgccttctgcccctactgctgccaccacctcca 1312
||||||||||||||||| ||||| ||||| | |||||||| ||||||||||||||||||
Sbjct: 442 ggatgaaccacatcctcacccctgcgctgacgcctgcccctgctgctgccaccacctcca 383
Query: 1313 aaagggcttcc---accaccaaagaatgactggaatatgtcaaagggatcgtgcatccct 1369
|| ||| | || ||||||||||||||| ||||| |||||||| ||||||||||| |
Sbjct: 382 aaggggttgccgccaccaccaaagaatgattggaagatgtcaaatggatcgtgcat---t 326
Query: 1370 ccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgc 1429
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 325 ccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcgc 266
Query: 1430 ttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcg 1489
|| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 265 ttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtcg 206
Query: 1490 ccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcc 1549
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 ccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcc 146
Query: 1550 tgggacgcgtctttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttc 1609
||||||||||| |||| || || |||||||||||||| || ||| ||||||||||||||
Sbjct: 145 tgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttc 86
Query: 1610 ggcg 1613
||||
Sbjct: 85 ggcg 82
>gb|BQ767061.1|BQ767061 EBro08_SQ007_I24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_I24 5', mRNA sequence
Length = 580
Score = 545 bits (275), Expect = e-153
Identities = 426/475 (89%), Gaps = 6/475 (1%)
Strand = Plus / Minus
Query: 1142 gaagctccagactttgaacccttaccattgcacttggagcagagaacactgcgggacaga 1201
||||| ||||||||||||||||| ||||||||||| |||||||| ||| |||||| |||
Sbjct: 562 gaagccccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaaga 503
Query: 1202 gagagcttctttgatgtgccattgtacaaatcctccagagaaacctttagaggatgaacc 1261
||||| ||||| ||||| ||||||||||| ||||| || |||||| ||||||||||||
Sbjct: 502 gagagtttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaacc 443
Query: 1262 acatcctctccccttcgctgccttctgcccctactgctgccaccacctccaaaagggctt 1321
|||||||| ||||| ||||| | |||||||| |||||||||||||||||||| ||| |
Sbjct: 442 acatcctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttg 383
Query: 1322 cc---accaccaaagaatgactggaatatgtcaaagggatcgtgcatccctccaccacct 1378
|| ||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||
Sbjct: 382 ccgccaccaccaaagaatgattggaagatgtcaaatggatcgtgcat---tccaccacct 326
Query: 1379 cccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttttcagga 1438
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 325 cccattccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcagga 266
Query: 1439 tcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccgcccttg 1498
||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 tcactcaagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttg 206
Query: 1499 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcg 1558
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 146
Query: 1559 tctttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|| |||| || || |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 145 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 91
>gb|AV932975.1|AV932975 AV932975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4o07 5', mRNA sequence
Length = 631
Score = 541 bits (273), Expect = e-152
Identities = 448/505 (88%), Gaps = 6/505 (1%)
Strand = Plus / Minus
Query: 1112 ccagaaccttggcaaccagcacacctcgatgaagctccagactttgaacccttaccattg 1171
|||| ||||||||| || |||||| || ||||||||||||||||||||||| ||||||
Sbjct: 630 ccagcaccttggcagccggcacacttcatggaagctccagactttgaacccttgccattg 571
Query: 1172 cacttggagcagagaacactgcgggacagagagagcttctttgatgtgccattgtacaaa 1231
||||| |||||||| ||| |||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 570 cactttgagcagagcacattgcgggcaagagagagtttcttcgatgttccattgtacaac 511
Query: 1232 tcctccagagaaacctttagaggatgaaccacatcctctccccttcgctgccttctgccc 1291
||||| || |||||| |||||||||||||||||||| ||||| ||||| | ||||||
Sbjct: 510 tcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgctgacgcctgccc 451
Query: 1292 ctactgctgccaccacctccaaaagggcttccaccacca---aagaatgactggaatatg 1348
|| |||||||||||||||||||| ||| | ||||||||| |||||||| ||||| |||
Sbjct: 450 ctgctgctgccaccacctccaaaggggttgccaccaccaccaaagaatgattggaagatg 391
Query: 1349 tcaaagggatcgtgcatccctccaccacctcccattccctccttgagggcatcctcacca 1408
||||| ||||| ||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 390 tcaaatggatcatgcat---tccaccgcctcccattccctccttgagggcatcctcacca 334
Query: 1409 tattgatcataaatctctcgcttttcaggatcactgaggacctcataagcctgagctagc 1468
|| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 333 tactgatcatagatctctcgcttctcaggatcactcaggacctcataagcctgagctagt 274
Query: 1469 tccttgaacttctcgggatcgccgcccttgtcggggtggttcttgatggcggccttgcgg 1528
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 214
Query: 1529 taggccttcttgaggtcatcctgggacgcgtctttggagaccccgaggatctcgtagtac 1588
||||||||||||||||| |||||||||||||| |||| || || ||||||||||||||
Sbjct: 213 taggccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggatctcgtagtag 154
Query: 1589 cgtgtgttgtcgctcttcttcggcg 1613
|| ||| ||||||||||||||||||
Sbjct: 153 cgcgtgctgtcgctcttcttcggcg 129
>gb|BI776717.2|BI776717 EBpi07_SQ001_I13_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_I13 5', mRNA sequence
Length = 575
Score = 541 bits (273), Expect = e-152
Identities = 421/469 (89%), Gaps = 6/469 (1%)
Strand = Plus / Minus
Query: 1148 ccagactttgaacccttaccattgcacttggagcagagaacactgcgggacagagagagc 1207
||||||||||||||||| ||||||||||| |||||||| ||| |||||| ||||||||
Sbjct: 572 ccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaagagagagt 513
Query: 1208 ttctttgatgtgccattgtacaaatcctccagagaaacctttagaggatgaaccacatcc 1267
||||| ||||| ||||||||||| ||||| || |||||| ||||||||||||||||||
Sbjct: 512 ttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaaccacatcc 453
Query: 1268 tctccccttcgctgccttctgcccctactgctgccaccacctccaaaagggcttcc---a 1324
|| ||||| ||||| | |||||||| |||||||||||||||||||| ||| | || |
Sbjct: 452 tcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttgccgcca 393
Query: 1325 ccaccaaagaatgactggaatatgtcaaagggatcgtgcatccctccaccacctcccatt 1384
|||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct: 392 ccaccaaagaatgattggaagatgtcaaatggatcgtgcat---tccaccacctcccatt 336
Query: 1385 ccctccttgagggcatcctcaccatattgatcataaatctctcgcttttcaggatcactg 1444
|||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct: 335 ccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatcactc 276
Query: 1445 aggacctcataagcctgagctagctccttgaacttctcgggatcgccgcccttgtcgggg 1504
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 275 aagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcgggg 216
Query: 1505 tggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcgtctttg 1564
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 215 tggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtccttg 156
Query: 1565 gagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
| || || |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 155 ggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 107
>gb|BJ547556.1|BJ547556 BJ547556 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31m24 5', mRNA sequence
Length = 630
Score = 541 bits (273), Expect = e-152
Identities = 448/505 (88%), Gaps = 6/505 (1%)
Strand = Plus / Minus
Query: 1112 ccagaaccttggcaaccagcacacctcgatgaagctccagactttgaacccttaccattg 1171
|||| ||||||||| || |||||| || ||||||||||||||||||||||| ||||||
Sbjct: 627 ccagcaccttggcagccggcacacttcatggaagctccagactttgaacccttgccattg 568
Query: 1172 cacttggagcagagaacactgcgggacagagagagcttctttgatgtgccattgtacaaa 1231
||||| |||||||| ||| |||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 567 cactttgagcagagcacattgcgggcaagagagagtttcttcgatgttccattgtacaac 508
Query: 1232 tcctccagagaaacctttagaggatgaaccacatcctctccccttcgctgccttctgccc 1291
||||| || |||||| |||||||||||||||||||| ||||| ||||| | ||||||
Sbjct: 507 tcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgctgacgcctgccc 448
Query: 1292 ctactgctgccaccacctccaaaagggcttccaccacca---aagaatgactggaatatg 1348
|| |||||||||||||||||||| ||| | ||||||||| |||||||| ||||| |||
Sbjct: 447 ctgctgctgccaccacctccaaaggggttgccaccaccaccaaagaatgattggaagatg 388
Query: 1349 tcaaagggatcgtgcatccctccaccacctcccattccctccttgagggcatcctcacca 1408
||||| ||||| ||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 387 tcaaatggatcatgcat---tccaccgcctcccattccctccttgagggcatcctcacca 331
Query: 1409 tattgatcataaatctctcgcttttcaggatcactgaggacctcataagcctgagctagc 1468
|| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 330 tactgatcatagatctctcgcttctcaggatcactcaggacctcataagcctgagctagt 271
Query: 1469 tccttgaacttctcgggatcgccgcccttgtcggggtggttcttgatggcggccttgcgg 1528
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 211
Query: 1529 taggccttcttgaggtcatcctgggacgcgtctttggagaccccgaggatctcgtagtac 1588
||||||||||||||||| |||||||||||||| |||| || || ||||||||||||||
Sbjct: 210 taggccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggatctcgtagtag 151
Query: 1589 cgtgtgttgtcgctcttcttcggcg 1613
|| ||| ||||||||||||||||||
Sbjct: 150 cgcgtgctgtcgctcttcttcggcg 126
>gb|AL507668.1|AL507668 AL507668 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06I06V 5',
mRNA sequence
Length = 700
Score = 539 bits (272), Expect = e-152
Identities = 425/475 (89%), Gaps = 6/475 (1%)
Strand = Plus / Minus
Query: 1142 gaagctccagactttgaacccttaccattgcacttggagcagagaacactgcgggacaga 1201
||||| ||||||||||||||||| ||||||||||| |||||||| ||| |||||| |||
Sbjct: 576 gaagccccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaaga 517
Query: 1202 gagagcttctttgatgtgccattgtacaaatcctccagagaaacctttagaggatgaacc 1261
||||| || || ||||| ||||||||||| ||||| || |||||| ||||||||||||
Sbjct: 516 gagagtttnttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaacc 457
Query: 1262 acatcctctccccttcgctgccttctgcccctactgctgccaccacctccaaaagggctt 1321
|||||||| ||||| ||||| | |||||||| |||||||||||||||||||| ||| |
Sbjct: 456 acatcctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttg 397
Query: 1322 cc---accaccaaagaatgactggaatatgtcaaagggatcgtgcatccctccaccacct 1378
|| ||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||
Sbjct: 396 ccgccaccaccaaagaatgattggaagatgtcaaatggatcgtgcat---tccaccacct 340
Query: 1379 cccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttttcagga 1438
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 339 cccattccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcagga 280
Query: 1439 tcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccgcccttg 1498
||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 279 tcactcaagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttg 220
Query: 1499 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcg 1558
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 219 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 160
Query: 1559 tctttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|| |||| || || |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 159 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 105
>gb|AV926309.1|AV926309 AV926309 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd18o07 5', mRNA sequence
Length = 619
Score = 537 bits (271), Expect = e-151
Identities = 425/475 (89%), Gaps = 6/475 (1%)
Strand = Plus / Minus
Query: 1142 gaagctccagactttgaacccttaccattgcacttggagcagagaacactgcgggacaga 1201
||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||| |||
Sbjct: 600 gaagctccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaaga 541
Query: 1202 gagagcttctttgatgtgccattgtacaaatcctccagagaaacctttagaggatgaacc 1261
||||| ||||| ||||| ||||||||||| ||||| || |||||| ||||||||||||
Sbjct: 540 gagagtttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaacc 481
Query: 1262 acatcctctccccttcgctgccttctgcccctactgctgccaccacctccaaaagggctt 1321
|||||||| ||||| ||||| | |||||||| |||||||||||||||||||| ||| |
Sbjct: 480 acatcctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttg 421
Query: 1322 ccaccacca---aagaatgactggaatatgtcaaagggatcgtgcatccctccaccacct 1378
||||||||| |||||||| ||||| |||||||| ||||| ||||| |||||| |||
Sbjct: 420 ccaccaccaccaaagaatgattggaagatgtcaaatggatcatgcat---tccaccgcct 364
Query: 1379 cccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttttcagga 1438
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 363 cccattccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcagga 304
Query: 1439 tcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccgcccttg 1498
||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 303 tcactcaggacctcataagcctgagctagttccttgaacttctcggggtcgccgcccttg 244
Query: 1499 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcg 1558
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 243 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 184
Query: 1559 tctttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|| |||| || || |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 183 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 129
>gb|BJ547080.1|BJ547080 BJ547080 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal14i23 5', mRNA sequence
Length = 603
Score = 537 bits (271), Expect = e-151
Identities = 425/475 (89%), Gaps = 6/475 (1%)
Strand = Plus / Minus
Query: 1142 gaagctccagactttgaacccttaccattgcacttggagcagagaacactgcgggacaga 1201
||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||| |||
Sbjct: 588 gaagctccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaaga 529
Query: 1202 gagagcttctttgatgtgccattgtacaaatcctccagagaaacctttagaggatgaacc 1261
||||| ||||| ||||| ||||||||||| ||||| || |||||| ||||||||||||
Sbjct: 528 gagagtttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaacc 469
Query: 1262 acatcctctccccttcgctgccttctgcccctactgctgccaccacctccaaaagggctt 1321
|||||||| ||||| ||||| | |||||||| |||||||||||||||||||| ||| |
Sbjct: 468 acatcctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttg 409
Query: 1322 ccaccacca---aagaatgactggaatatgtcaaagggatcgtgcatccctccaccacct 1378
||||||||| |||||||| ||||| |||||||| ||||| ||||| |||||| |||
Sbjct: 408 ccaccaccaccaaagaatgattggaagatgtcaaatggatcatgcat---tccaccgcct 352
Query: 1379 cccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttttcagga 1438
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 351 cccattccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcagga 292
Query: 1439 tcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccgcccttg 1498
||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 291 tcactcaggacctcataagcctgagctagttccttgaacttctcggggtcgccgcccttg 232
Query: 1499 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcg 1558
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 231 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 172
Query: 1559 tctttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|| |||| || || |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 171 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 117
>gb|AV924641.1|AV924641 AV924641 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd16f23 5', mRNA sequence
Length = 512
Score = 531 bits (268), Expect = e-149
Identities = 422/472 (89%), Gaps = 6/472 (1%)
Strand = Plus / Minus
Query: 1145 gctccagactttgaacccttaccattgcacttggagcagagaacactgcgggacagagag 1204
|||||||||||||||||||| ||||||||||| |||||||| ||| |||||| ||||||
Sbjct: 512 gctccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaagagag 453
Query: 1205 agcttctttgatgtgccattgtacaaatcctccagagaaacctttagaggatgaaccaca 1264
|| ||||| ||||| ||||||||||| ||||| || |||||| |||||||||||||||
Sbjct: 452 agtttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaaccaca 393
Query: 1265 tcctctccccttcgctgccttctgcccctactgctgccaccacctccaaaagggcttcca 1324
||||| ||||| ||||| | |||||||| |||||||||||||||||||| ||| | |||
Sbjct: 392 tcctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttgcca 333
Query: 1325 ccacca---aagaatgactggaatatgtcaaagggatcgtgcatccctccaccacctccc 1381
|||||| |||||||| ||||| |||||||| ||||| ||||| |||||| ||||||
Sbjct: 332 ccaccaccaaagaatgattggaagatgtcaaatggatcatgcat---tccaccgcctccc 276
Query: 1382 attccctccttgagggcatcctcaccatattgatcataaatctctcgcttttcaggatca 1441
||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 275 attccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatca 216
Query: 1442 ctgaggacctcataagcctgagctagctccttgaacttctcgggatcgccgcccttgtcg 1501
|| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 215 ctcaggacctcataagcctgagctagttccttgaacttctcggggtcgccgcccttgtcg 156
Query: 1502 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcgtct 1561
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 155 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtcc 96
Query: 1562 ttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|||| || || |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 95 ttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 44
>gb|CA002177.1|CA002177 HS06L24r HS Hordeum vulgare subsp. vulgare cDNA clone HS06L24
5-PRIME, mRNA sequence
Length = 595
Score = 527 bits (266), Expect = e-148
Identities = 421/470 (89%), Gaps = 7/470 (1%)
Strand = Plus / Minus
Query: 1148 ccagactttgaacccttaccattgcacttggagcagagaacactgcgggacagagagagc 1207
||||||||||||||||| ||||||||||| |||||||| ||| |||||| ||||||||
Sbjct: 594 ccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaagagagagt 535
Query: 1208 ttctttgatgtgccattgtacaaatcctccagagaaacctttagaggatgaaccacatcc 1267
||||| ||||| ||||||||||| ||||| || |||||| ||||||||||||||||||
Sbjct: 534 ttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaaccacatcc 475
Query: 1268 -tctccccttcgctgccttctgcccctactgctgccaccacctccaaaagggcttcc--- 1323
|| ||||| ||||| | |||||||| |||||||||||||||||||| ||| | ||
Sbjct: 474 ctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttgccgcc 415
Query: 1324 accaccaaagaatgactggaatatgtcaaagggatcgtgcatccctccaccacctcccat 1383
||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 414 accaccaaagaatgattggaagatgtcaaatggatcgtgcat---tccaccacctcccat 358
Query: 1384 tccctccttgagggcatcctcaccatattgatcataaatctctcgcttttcaggatcact 1443
||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct: 357 tccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatcact 298
Query: 1444 gaggacctcataagcctgagctagctccttgaacttctcgggatcgccgcccttgtcggg 1503
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 297 caagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcggg 238
Query: 1504 gtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcgtcttt 1563
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 237 gtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtcctt 178
Query: 1564 ggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|| || || |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 177 gggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 128
>gb|BF265760.2|BF265760 HV_CEa0013E07f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013E07f, mRNA sequence
Length = 757
Score = 521 bits (263), Expect = e-146
Identities = 423/475 (89%), Gaps = 6/475 (1%)
Strand = Plus / Minus
Query: 1142 gaagctccagactttgaacccttaccattgcacttggagcagagaacactgcgggacaga 1201
||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||| |||
Sbjct: 589 gaagctccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaaga 530
Query: 1202 gagagcttctttgatgtgccattgtacaaatcctccagagaaacctttagaggatgaacc 1261
||||| ||||| ||||| ||||||||||| ||||| || |||||| ||||||||| ||
Sbjct: 529 gagagtttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgagcc 470
Query: 1262 acatcctctccccttcgctgccttctgcccctactgctgccaccacctccaaaagggctt 1321
|||||||| ||||| || || | |||||||| |||||||||||||||||||| ||| |
Sbjct: 469 acatcctcacccctgcggtgacgcctgcccctgctgctgccaccacctccaaaggggttg 410
Query: 1322 ccaccacca---aagaatgactggaatatgtcaaagggatcgtgcatccctccaccacct 1378
||||||||| |||||||| ||||| |||||||| ||||| ||||| |||||| |||
Sbjct: 409 ccaccaccaccaaagaatgattggaagatgtcaaatggatcatgcat---tccaccgcct 353
Query: 1379 cccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttttcagga 1438
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 352 cccattccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcagga 293
Query: 1439 tcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccgcccttg 1498
||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 292 tcactcaggacctcataagcctgagctagttccttgaacttctcggggtcgccgcccttg 233
Query: 1499 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcg 1558
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 232 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 173
Query: 1559 tctttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|| |||| || || |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 172 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 118
>gb|BJ547588.1|BJ547588 BJ547588 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal32k04 5', mRNA sequence
Length = 587
Score = 515 bits (260), Expect = e-144
Identities = 444/503 (88%), Gaps = 7/503 (1%)
Strand = Plus / Minus
Query: 1112 ccagaaccttggcaaccagcacacctcgatgaagctccagactttgaacccttaccattg 1171
|||| ||||||||| || |||||| || ||||||||||||||||||||||| ||||||
Sbjct: 585 ccagcaccttggcagccggcacacttcatggaagctccagactttgaacccttgccattg 526
Query: 1172 cacttggagcagagaacactgcgggacagagagagcttctttgatgtgccattgtacaaa 1231
||||| |||||||| ||| |||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 525 cactttgagcagagcacattgcgggcaagagagagtttcttcgatgttccattgtacaac 466
Query: 1232 tcctccagagaaacctttagaggatgaaccacatcctctccccttcgctgccttctgccc 1291
||||| || |||||| |||||||||||||||||||| ||||| ||||| | ||||||
Sbjct: 465 tcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgctgacgcctgccc 406
Query: 1292 ctactgctgccaccacctccaaaagggcttccaccacca---aagaatgactggaatatg 1348
|| |||||||||||||||||||| ||| | ||||||||| |||||||| ||||| |||
Sbjct: 405 ctgctgctgccaccacctccaaaggggttgccaccaccaccaaagaatgattggaagatg 346
Query: 1349 tcaaagggatcgtgcatccctccaccacctcccattccctccttgagggcatcctcacca 1408
||||| ||||| ||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 345 tcaaatggatcatgcat---tccaccgcctcccattccctccttgagggcatcctcacca 289
Query: 1409 tattgatcataaatctctcgcttttcaggatcactgaggacctcataagcctgagctagc 1468
|| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 288 tactgatcatagatctctcgcttctcaggatcactcaggacctcataagcctgagctagt 229
Query: 1469 tccttgaacttctcgggatcgccgcccttgtcggggtggttcttgatggcggccttgcgg 1528
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 169
Query: 1529 taggccttcttgaggtcatcctgggacgcgtctttggagaccccgaggatctc-gtagta 1587
||||||||||||||||| |||||||||||||| |||| || || ||||||| ||||||
Sbjct: 168 taggccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggatctntgtagta 109
Query: 1588 ccgtgtgttgtcgctcttcttcg 1610
|| ||| |||||||||||||||
Sbjct: 108 gcgcgtgctgtcgctcttcttcg 86
>gb|CA003896.1|CA003896 HS15P12r HS Hordeum vulgare subsp. vulgare cDNA clone HS15P12
5-PRIME, mRNA sequence
Length = 501
Score = 504 bits (254), Expect = e-141
Identities = 432/490 (88%), Gaps = 6/490 (1%)
Strand = Plus / Minus
Query: 1041 tgcactcattgcaaggatgctgcatttgctgaatcattccaggccccaactgccggattt 1100
||||||||||||| || |||||||||||||| |||||||| || |||| ||||| ||| |
Sbjct: 491 tgcactcattgcagggctgctgcatttgctgtatcattcctggtcccagctgcctgatct 432
Query: 1101 ggaccttaaagccagaaccttggcaaccagcacacctcgatgaagctccagactttgaac 1160
||||||| | |||| ||||||||| || |||||| || ||||| |||||||||||||
Sbjct: 431 ggaccttgtaaccagcaccttggcagccggcacacttcatggaagccccagactttgaac 372
Query: 1161 ccttaccattgcacttggagcagagaacactgcgggacagagagagcttctttgatgtgc 1220
|||| ||||||||||| |||||||| ||| |||||| |||||||| ||||| ||||| |
Sbjct: 371 ccttgccattgcactttgagcagagcacattgcgggcaagagagagtttcttcgatgttc 312
Query: 1221 cattgtacaaatcctccagagaaacctttagaggatgaaccacatcctctccccttcgct 1280
|||||||||| ||||| || |||||| |||||||||||||||||||| ||||| ||||
Sbjct: 311 cattgtacaactcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgct 252
Query: 1281 gccttctgcccctactgctgccaccacctccaaaagggcttcc---accaccaaagaatg 1337
| | |||||||| |||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 251 gacgcctgcccctgctgctgccaccacctccaaaggggttgccgccaccaccaaagaatg 192
Query: 1338 actggaatatgtcaaagggatcgtgcatccctccaccacctcccattccctccttgaggg 1397
| ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 191 attggaagatgtcaaatggatcgtgcat---tccaccacctcccattccctccttgaggg 135
Query: 1398 catcctcaccatattgatcataaatctctcgcttttcaggatcactgaggacctcataag 1457
||||||||||||| |||||||| ||||||||||| ||||||||||| | |||||||||||
Sbjct: 134 catcctcaccatactgatcatagatctctcgcttctcaggatcactcaagacctcataag 75
Query: 1458 cctgagctagctccttgaacttctcgggatcgccgcccttgtcggggtggttcttgatgg 1517
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 74 cctgagctagctccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatgg 15
Query: 1518 cggccttgcg 1527
||||||||||
Sbjct: 14 cggccttgcg 5
>gb|BJ547294.1|BJ547294 BJ547294 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29p02 5', mRNA sequence
Length = 485
Score = 486 bits (245), Expect = e-135
Identities = 396/445 (88%), Gaps = 6/445 (1%)
Strand = Plus / Minus
Query: 1172 cacttggagcagagaacactgcgggacagagagagcttctttgatgtgccattgtacaaa 1231
||||| |||||||| ||| |||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 485 cactttgagcagagcacattgcgggcaagagagagtttcttcgatgttccattgtacaac 426
Query: 1232 tcctccagagaaacctttagaggatgaaccacatcctctccccttcgctgccttctgccc 1291
||||| || |||||| |||||||||||||||||||| ||||| ||||| | ||||||
Sbjct: 425 tcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgctgacgcctgccc 366
Query: 1292 ctactgctgccaccacctccaaaagggcttccaccacca---aagaatgactggaatatg 1348
|| |||||||||||||||||||| ||| | ||||||||| |||||||| ||||| |||
Sbjct: 365 ctgctgctgccaccacctccaaaggggttgccaccaccaccaaagaatgattggaagatg 306
Query: 1349 tcaaagggatcgtgcatccctccaccacctcccattccctccttgagggcatcctcacca 1408
||||| ||||| ||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 305 tcaaatggatcatgcat---tccaccgcctcccattccctccttgagggcatcctcacca 249
Query: 1409 tattgatcataaatctctcgcttttcaggatcactgaggacctcataagcctgagctagc 1468
|| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 248 tactgatcatagatctctcgcttctcaggatcactcaggacctcataagcctgagctagt 189
Query: 1469 tccttgaacttctcgggatcgccgcccttgtcggggtggttcttgatggcggccttgcgg 1528
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 129
Query: 1529 taggccttcttgaggtcatcctgggacgcgtctttggagaccccgaggatctcgtagtac 1588
||||||||||||||||| |||||||||||||| |||| || || ||||||||||||||
Sbjct: 128 taggccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggatctcgtagtag 69
Query: 1589 cgtgtgttgtcgctcttcttcggcg 1613
|| ||| ||||||||||||||||||
Sbjct: 68 cgcgtgctgtcgctcttcttcggcg 44
>gb|CB877624.1|CB877624 HP05J18T HP Hordeum vulgare subsp. vulgare cDNA clone HP05J18
5-PRIME, mRNA sequence
Length = 660
Score = 474 bits (239), Expect = e-132
Identities = 534/627 (85%), Gaps = 9/627 (1%)
Strand = Plus / Minus
Query: 890 gcttcatcagcttcgccagggaatgtgatcttctgcccgttctgcatacctttctcaact 949
|||||||| || || |||||||| ||||||||||| || | ||||||||| ||||| ||
Sbjct: 631 gcttcatctgcctctccagggaaggtgatcttctgtccatgctgcatacccttctcgacc 572
Query: 950 accacttcaagaactttcttctccggcacaactttatcacctttgcattgtgggcatcta 1009
||||| || || ||||||||||| | || || || ||||| ||||| || ||| | |
Sbjct: 571 accacctccaggactttcttctcgtgaaccaccttctcacccttgcactgcccgcaacga 512
Query: 1010 tccttatcgctgatggtctctccagaacccttgcactcattgcaaggatgctgcatttgc 1069
|||||||| ||||||||||| ||| ||| ||||||||||||| || ||||||||||||
Sbjct: 511 tccttatcactgatggtctcaccacttcccctgcactcattgcagggctgctgcatttgc 452
Query: 1070 tgaatcattccaggccccaactgccggatttggaccttaaagccagaaccttggcaacca 1129
|| |||||||| || |||| ||||| ||| |||||||| | |||| ||||||||| ||
Sbjct: 451 tgtatcattcctggtcccagctgcctgatctggaccttgtaaccagcaccttggcagccg 392
Query: 1130 gcacacctcgatgaagctccagactttgaacccttaccattgcacttggagcagagaaca 1189
|||||| || ||||| ||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 391 gcacacttcatggaagccccagactttgaacccttgccattgcactttgagcagagcaca 332
Query: 1190 ctgcgggacagagagagcttctttgatgtgccattgtacaaatcctccagagaaaccttt 1249
|||||| |||||||| ||||| ||||| ||||||||||| ||||| || ||||||
Sbjct: 331 ttgcgggcaagagagagtttcttcgatgttccattgtacaactcctcaaggctaaccttc 272
Query: 1250 agaggatgaaccacatcctctccccttcgctgccttctgcccctactgctgccaccacct 1309
|||||||||||||||||||| ||||| ||||| | |||||||| |||||||||||||||
Sbjct: 271 agaggatgaaccacatcctcacccctgcgctgacgcctgcccctgctgctgccaccacct 212
Query: 1310 ccaaaagg---gcttccaccaccaaagaatgactggaatatgtcaaagggatcgtgcatc 1366
||||| || || ||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 211 ccaaaggggttgccgccaccaccaaagaatgattggaagatgtcaaatggatcgtgcat- 153
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 152 --tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctct 95
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| ||||||||||| | |||||||||||||||||||||||||||| ||||||||||
Sbjct: 94 cgcttctcaggatcactcaagacctcataagcctgagctagctccttg-acttctcggg- 37
Query: 1487 tcgccgcccttgtcggggtggttcttg 1513
|||||||||||||| |||||||||||
Sbjct: 36 tcgccgcccttgtc-aggtggttcttg 11
>gb|CA017990.1|CA017990 HV07B06r HV Hordeum vulgare subsp. vulgare cDNA clone HV07B06
5-PRIME, mRNA sequence
Length = 529
Score = 460 bits (232), Expect = e-128
Identities = 363/404 (89%), Gaps = 7/404 (1%)
Strand = Plus / Minus
Query: 1214 gatgtgccattgtacaaatcctccagagaaacctttagaggatgaaccacatcc-tctcc 1272
||||| ||||||||||| ||||| || |||||| |||||||||||||||||| || ||
Sbjct: 528 gatgttccattgtacaactcctcaaggctaaccttcagaggatgaaccacatccctcacc 469
Query: 1273 ccttcgctgccttctgcccctactgctgccaccacctccaaaagggcttcc---accacc 1329
||| ||||| | |||||||| |||||||||||||||||||| ||| | || ||||||
Sbjct: 468 cctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttgccgccaccacc 409
Query: 1330 aaagaatgactggaatatgtcaaagggatcgtgcatccctccaccacctcccattccctc 1389
||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 408 aaagaatgattggaagatgtcaaatggatcgtgcat---tccaccacctcccattccctc 352
Query: 1390 cttgagggcatcctcaccatattgatcataaatctctcgcttttcaggatcactgaggac 1449
||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| | |||
Sbjct: 351 cttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatcactcaagac 292
Query: 1450 ctcataagcctgagctagctccttgaacttctcgggatcgccgcccttgtcggggtggtt 1509
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 291 ctcataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcggggtggtt 232
Query: 1510 cttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcgtctttggagac 1569
|||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||
Sbjct: 231 cttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtccttgggcac 172
Query: 1570 cccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|| |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 171 gcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 128
>gb|CA007094.1|CA007094 HU06L13r HU Hordeum vulgare subsp. vulgare cDNA clone HU06L13
5-PRIME, mRNA sequence
Length = 480
Score = 458 bits (231), Expect = e-127
Identities = 334/367 (91%), Gaps = 6/367 (1%)
Strand = Plus / Minus
Query: 1250 agaggatgaaccacatcctctccccttcgctgccttctgcccctactgctgccaccacct 1309
|||||||||||||||||||| ||||| ||||| | |||||||| |||||||||||||||
Sbjct: 479 agaggatgaaccacatcctcacccctgcgctgacgcctgcccctgctgctgccaccacct 420
Query: 1310 ccaaaagggcttcc---accaccaaagaatgactggaatatgtcaaagggatcgtgcatc 1366
||||| ||| | || ||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 419 ccaaaggggttgccgccaccaccaaagaatgattggaagatgtcaaatggatcgtgcat- 361
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 360 --tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctct 303
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgcttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcgggg 243
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtca 1546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcgccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcg 183
Query: 1547 tcctgggacgcgtctttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttc 1606
|||||||||||||| |||| || || |||||||||||||| || ||| |||||||||||
Sbjct: 182 tcctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttc 123
Query: 1607 ttcggcg 1613
|||||||
Sbjct: 122 ttcggcg 116
>gb|AL506148.1|AL506148 AL506148 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02D05T 5',
mRNA sequence
Length = 491
Score = 418 bits (211), Expect = e-115
Identities = 338/375 (90%), Gaps = 9/375 (2%)
Strand = Plus / Minus
Query: 1245 cctttagaggatgaacca-catcctctccccttc-gctgccttctgcccctactgct-gc 1301
|||| ||||||||||||| ||||||| ||||| | |||| | |||||||| ||||| ||
Sbjct: 490 ccttcagaggatgaaccaacatcctcacccctgcagctgacgcctgcccctgctgcttgc 431
Query: 1302 caccacctccaaaagggcttcc---accaccaaagaatgactggaatatgtcaaagggat 1358
||||||||||||| ||| | || ||||||||||||||| ||||| |||||||| ||||
Sbjct: 430 caccacctccaaaggggttgccgccaccaccaaagaatgattggaagatgtcaaatggat 371
Query: 1359 cgtgcatccctccaccacctcccattccctccttgagggcatcctcaccatattgatcat 1418
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 370 cgtgcat---tccaccacctcccattccctccttgagggcatcctcaccatactgatcat 314
Query: 1419 aaatctctcgcttttcaggatcactgaggacctcataagcctgagctagctccttgaact 1478
| ||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 313 agatctctcgcttctcaggatcactcaagacctcataagcctgagctagctccttgaact 254
Query: 1479 tctcgggatcgccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttct 1538
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttct 194
Query: 1539 tgaggtcatcctgggacgcgtctttggagaccccgaggatctcgtagtaccgtgtgttgt 1598
||||||| |||||||||||||| |||| || || |||||||||||||| || ||| |||
Sbjct: 193 tgaggtcgtcctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgt 134
Query: 1599 cgctcttcttcggcg 1613
|||||||||||||||
Sbjct: 133 cgctcttcttcggcg 119
>gb|BM370867.2|BM370867 EBro04_SQ002_J15_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_J15 5', mRNA sequence
Length = 445
Score = 414 bits (209), Expect = e-114
Identities = 294/321 (91%), Gaps = 6/321 (1%)
Strand = Plus / Minus
Query: 1296 tgctgccaccacctccaaaagggcttcc---accaccaaagaatgactggaatatgtcaa 1352
||||||||||||||||||| ||| | || ||||||||||||||| ||||| |||||||
Sbjct: 437 tgctgccaccacctccaaaggggttgccgccaccaccaaagaatgattggaagatgtcaa 378
Query: 1353 agggatcgtgcatccctccaccacctcccattccctccttgagggcatcctcaccatatt 1412
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 377 atggatcgtgcat---tccaccacctcccattccctccttgagggcatcctcaccatact 321
Query: 1413 gatcataaatctctcgcttttcaggatcactgaggacctcataagcctgagctagctcct 1472
||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 320 gatcatagatctctcgcttctcaggatcactcaagacctcataagcctgagctagctcct 261
Query: 1473 tgaacttctcgggatcgccgcccttgtcggggtggttcttgatggcggccttgcggtagg 1532
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcggtagg 201
Query: 1533 ccttcttgaggtcatcctgggacgcgtctttggagaccccgaggatctcgtagtaccgtg 1592
||||||||||||| |||||||||||||| |||| || || |||||||||||||| || |
Sbjct: 200 ccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcg 141
Query: 1593 tgttgtcgctcttcttcggcg 1613
|| ||||||||||||||||||
Sbjct: 140 tgctgtcgctcttcttcggcg 120
>gb|CA003209.1|CA003209 HS09L24r HS Hordeum vulgare subsp. vulgare cDNA clone HS09L24
5-PRIME, mRNA sequence
Length = 565
Score = 408 bits (206), Expect = e-112
Identities = 271/292 (92%), Gaps = 3/292 (1%)
Strand = Plus / Minus
Query: 1322 ccaccaccaaagaatgactggaatatgtcaaagggatcgtgcatccctccaccacctccc 1381
||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 401 ccaccaccaaagaatgattggaagatgtcaaatggatcgtgcat---tccaccacctccc 345
Query: 1382 attccctccttgagggcatcctcaccatattgatcataaatctctcgcttttcaggatca 1441
||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 344 attccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatca 285
Query: 1442 ctgaggacctcataagcctgagctagctccttgaacttctcgggatcgccgcccttgtcg 1501
|| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 284 ctcaagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcg 225
Query: 1502 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcgtct 1561
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 224 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtcc 165
Query: 1562 ttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|||| || || |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 164 ttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 113
Score = 40.1 bits (20), Expect = 0.22
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1286 ctgcccctactgctgccaccacct 1309
|||||||| |||||||||||||||
Sbjct: 555 ctgcccctgctgctgccaccacct 532
>gb|BF265966.2|BF265966 HV_CEa0013M21f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013M21f, mRNA sequence
Length = 749
Score = 392 bits (198), Expect = e-107
Identities = 269/292 (92%), Gaps = 3/292 (1%)
Strand = Plus / Minus
Query: 1322 ccaccaccaaagaatgactggaatatgtcaaagggatcgtgcatccctccaccacctccc 1381
||||||||||||||||| ||||| |||||||| ||||| ||||| |||||| ||||||
Sbjct: 406 ccaccaccaaagaatgattggaagatgtcaaatggatcatgcat---tccaccgcctccc 350
Query: 1382 attccctccttgagggcatcctcaccatattgatcataaatctctcgcttttcaggatca 1441
||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 349 attccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatca 290
Query: 1442 ctgaggacctcataagcctgagctagctccttgaacttctcgggatcgccgcccttgtcg 1501
|| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 289 ctcaggacctcataagcctgagctagttccttgaacttctcggggtcgccgcccttgtcg 230
Query: 1502 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcgtct 1561
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 229 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtcc 170
Query: 1562 ttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|||| || || |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 169 ttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 118
>gb|CA027461.1|CA027461 HZ58P24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ58P24
5-PRIME, mRNA sequence
Length = 429
Score = 392 bits (198), Expect = e-107
Identities = 367/422 (86%), Gaps = 6/422 (1%)
Strand = Plus / Minus
Query: 1064 atttgctgaatcattccaggccccaactgccggatttggaccttaaagccagaaccttgg 1123
|||||||| |||||||| || |||| ||||| ||| |||||||| | |||| |||||||
Sbjct: 429 atttgctgtatcattcctggtcccagctgcctgatctggaccttgtaaccagcaccttgg 370
Query: 1124 caaccagcacacctcgatgaagctccagactttgaacccttaccattgcacttggagcag 1183
|| || |||||| || ||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 369 cagccggcacacttcatggaagccccagactttgaacccttgccattgcactttgagcag 310
Query: 1184 agaacactgcgggacagagagagcttctttgatgtgccattgtacaaatcctccagagaa 1243
|| ||| |||||| |||||||| ||||| ||||| ||||||||||| ||||| || |
Sbjct: 309 agcacattgcgggcaagagagagtttcttcgatgttccattgtacaactcctcaaggcta 250
Query: 1244 acctttagaggatgaaccacatcctctccccttcgctgccttctgcccctactgctgcca 1303
||||| |||||||||||||||||||| ||||| ||||| | |||||||| |||||||||
Sbjct: 249 accttcagaggatgaaccacatcctcacccctgcgctgacgcctgcccctgctgctgcca 190
Query: 1304 ccacctccaaaagg---gcttccaccaccaaagaatgactggaatatgtcaaagggatcg 1360
||||||||||| || || ||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 189 ccacctccaaaggggttgccgccaccaccaaagaatgattggaagatgtcaaatggatcg 130
Query: 1361 tgcatccctccaccacctcccattccctccttgagggcatcctcaccatattgatcataa 1420
||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 129 tgcat---tccaccacctcccattccctccttgagggcatcctcaccatactgatcatag 73
Query: 1421 atctctcgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttc 1480
||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 72 atctctcgcttctcaggatcactcaagacctcataagcctgagctagctccttgaacttc 13
Query: 1481 tc 1482
||
Sbjct: 12 tc 11
>gb|CA023375.1|CA023375 HZ46A15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46A15
5-PRIME, mRNA sequence
Length = 392
Score = 391 bits (197), Expect = e-107
Identities = 262/283 (92%), Gaps = 3/283 (1%)
Strand = Plus / Minus
Query: 1331 aagaatgactggaatatgtcaaagggatcgtgcatccctccaccacctcccattccctcc 1390
|||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 392 aagaatgattggaagatgtcaaatggatcgtgcat---tccaccacctcccattccctcc 336
Query: 1391 ttgagggcatcctcaccatattgatcataaatctctcgcttttcaggatcactgaggacc 1450
|||||||||||||||||||| |||||||| ||||||||||| ||||||||||| | ||||
Sbjct: 335 ttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatcactcaagacc 276
Query: 1451 tcataagcctgagctagctccttgaacttctcgggatcgccgcccttgtcggggtggttc 1510
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 275 tcataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcggggtggttc 216
Query: 1511 ttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcgtctttggagacc 1570
||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||
Sbjct: 215 ttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtccttgggcacg 156
Query: 1571 ccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
|| |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 155 cccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 113
>gb|CA002173.1|CA002173 HS06L19r HS Hordeum vulgare subsp. vulgare cDNA clone HS06L19
5-PRIME, mRNA sequence
Length = 406
Score = 389 bits (196), Expect = e-106
Identities = 261/282 (92%), Gaps = 3/282 (1%)
Strand = Plus / Minus
Query: 1332 agaatgactggaatatgtcaaagggatcgtgcatccctccaccacctcccattccctcct 1391
||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 406 agaatgattggaagatgtcaaatggatcgtgcat---tccaccacctcccattccctcct 350
Query: 1392 tgagggcatcctcaccatattgatcataaatctctcgcttttcaggatcactgaggacct 1451
||||||||||||||||||| |||||||| ||||||||||| ||||||||||| | |||||
Sbjct: 349 tgagggcatcctcaccatactgatcatagatctctcgcttctcaggatcactcaagacct 290
Query: 1452 cataagcctgagctagctccttgaacttctcgggatcgccgcccttgtcggggtggttct 1511
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 289 cataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcggggtggttct 230
Query: 1512 tgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcgtctttggagaccc 1571
|||||||||||||||||||||||||||||||||| |||||||||||||| |||| || |
Sbjct: 229 tgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtccttgggcacgc 170
Query: 1572 cgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
| |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 169 ccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 128
>gb|BQ765166.1|BQ765166 EBro03_SQ006_N12_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_N12 5', mRNA sequence
Length = 297
Score = 381 bits (192), Expect = e-104
Identities = 270/295 (91%), Gaps = 6/295 (2%)
Strand = Plus / Minus
Query: 1296 tgctgccaccacctccaaaagggcttcc---accaccaaagaatgactggaatatgtcaa 1352
||||||||||||||||||| ||| | || ||||||||||||||| ||||| |||||||
Sbjct: 297 tgctgccaccacctccaaaggggttgccgccaccaccaaagaatgattggaagatgtcaa 238
Query: 1353 agggatcgtgcatccctccaccacctcccattccctccttgagggcatcctcaccatatt 1412
| |||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 237 atggatngtgcat---tccaccacctcccattccctccttgagggcatcctcaccatact 181
Query: 1413 gatcataaatctctcgcttttcaggatcactgaggacctcataagcctgagctagctcct 1472
||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 180 gatcatagatctctcgcttctcaggatcactcaagacctcataagcctgagctagctcct 121
Query: 1473 tgaacttctcgggatcgccgcccttgtcggggtggttcttgatggcggccttgcggtagg 1532
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcggtagg 61
Query: 1533 ccttcttgaggtcatcctgggacgcgtctttggagaccccgaggatctcgtagta 1587
||||||||||||| |||||||||||||| |||| || || ||||||||||||||
Sbjct: 60 ccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggatctcgtagta 6
>gb|BI955028.1|BI955028 HVSMEm0020O14f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0020O14f, mRNA sequence
Length = 686
Score = 369 bits (186), Expect = e-100
Identities = 289/322 (89%), Gaps = 6/322 (1%)
Strand = Plus / Minus
Query: 1295 ctgctgccaccacctccaaaaggg---cttccaccaccaaagaatgactggaatatgtca 1351
|||||||||||||||||||| ||| | ||||||||||||||||| ||| | ||||||
Sbjct: 431 ctgctgccaccacctccaaaggggtgtccgccaccaccaaagaatgattgggagatgtca 372
Query: 1352 aagggatcgtgcatccctccaccacctcccattccctccttgagggcatcctcaccatat 1411
|| |||| |||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 371 aatggatggtgcat---tccaccacctcccattccctcgttgagggcatcctcaccatac 315
Query: 1412 tgatcataaatctctcgcttttcaggatcactgaggacctcataagcctgagctagctcc 1471
|||||||| ||||||||||| ||||||||||| | |||||||||||||||||||||||||
Sbjct: 314 tgatcatagatctctcgcttctcaggatcactcaagacctcataagcctgagctagctcc 255
Query: 1472 ttgaacttctcgggatcgccgcccttgtcggggtggttcttgatggcggccttgcggtag 1531
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcggtag 195
Query: 1532 gccttcttgaggtcatcctgggacgcgtctttggagaccccgaggatctcgtagtaccgt 1591
|||||||||||||| |||||| |||| | |||| || || |||||||||||||| ||
Sbjct: 194 gccttcttgaggtcgtcctggcacgcccccttgggcacgcccaggatctcgtagtagcgc 135
Query: 1592 gtgttgtcgctcttcttcggcg 1613
||| ||||||||||||||||||
Sbjct: 134 gtgctgtcgctcttcttcggcg 113
>gb|CB859966.1|CB859966 HI12C19w HI Hordeum vulgare subsp. vulgare cDNA clone HI12C19
3-PRIME, mRNA sequence
Length = 661
Score = 363 bits (183), Expect = 1e-098
Identities = 447/534 (83%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 127 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 186
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || ||||||||| ||||||||||||| || || |||| | |||
Sbjct: 187 ataggcctcctgcgcctgctgctgctgctgcctccgcatctcttcctcaatgtctatgtc 246
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 247 gtaggccatcgtctcctcgcactcgtctagctccatgtccgtgtactgcgatgccggctt 306
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| |||||| |||||| ||||| |
Sbjct: 307 gggcgggaggaccgtctcgagggccttgcactggtccaggctcagcgagtcggggaaaac 366
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
|||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 367 aaccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 426
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 427 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 486
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 487 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 546
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| ||| |||| | |||||| |||| |||||
Sbjct: 547 cagggtcagggtgtgctcatagaagaggtcgtcggccttccgcttgaatntggggtgctc 606
Query: 811 cttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
|||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 607 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 660
>gb|CB878788.1|CB878788 HP09M21T HP Hordeum vulgare subsp. vulgare cDNA clone HP09M21
5-PRIME, mRNA sequence
Length = 467
Score = 363 bits (183), Expect = 1e-098
Identities = 370/431 (85%), Gaps = 6/431 (1%)
Strand = Plus / Minus
Query: 1009 atccttatcgctgatggtctctccagaacccttgcactcattgcaaggatgctgcatttg 1068
||||||||| ||||||||||| ||| ||| ||||||||||||| || |||||||||||
Sbjct: 428 atccttatcactgatggtctcaccacttcccctgcactcattgcagggctgctgcatttg 369
Query: 1069 ctgaatcattccaggccccaactgccggatttggaccttaaagccagaaccttggcaacc 1128
||| |||||||| || |||| ||||| ||| |||||||| | |||| ||||||||| ||
Sbjct: 368 ctgtatcattcctggtcccagctgcctgatctggaccttgtaaccagcaccttggcagcc 309
Query: 1129 agcacacctcgatgaagctccagactttgaacccttaccattgcacttggagcagagaac 1188
|||||| || ||||| ||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 308 ggcacacttcatggaagccccagactttgaacccttgccattgcactttgagcagagcac 249
Query: 1189 actgcgggacagagagagcttctttgatgtgccattgtacaaatcctccagagaaacctt 1248
| |||||| |||||||| ||||| ||||| ||||||||||| ||||| || ||||||
Sbjct: 248 attgcgggcaagagagagtttcttcgatgttccattgtacaactcctcaaggctaacctt 189
Query: 1249 tagaggatgaaccacatcctctccccttcgctgccttctgcccctactgctgccaccacc 1308
|||||||||||||||||||| ||||| ||||| | |||||||| ||||||||||||||
Sbjct: 188 cagaggatgaaccacatcctcacccctgcgctgacgcctgcccctgctgctgccaccacc 129
Query: 1309 tccaaaagg---gcttccaccaccaaagaatgactggaatatgtcaaagggatcgtgcat 1365
|||||| || || ||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 128 tccaaaggggttgccgccaccaccaaagaatgattggaagatgtcaaatggatcgtgcat 69
Query: 1366 ccctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctc 1425
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 68 ---tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctc 12
Query: 1426 tcgcttttcag 1436
|||||| ||||
Sbjct: 11 tcgcttctcag 1
>gb|BJ458979.1|BJ458979 BJ458979 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34c22 3', mRNA sequence
Length = 591
Score = 359 bits (181), Expect = 2e-097
Identities = 410/486 (84%), Gaps = 3/486 (0%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcctggcacatcatcatcctcgtcgta 396
|||||||||||||||||||||||||||||| ||||| |||| ||| || |||||||| ||
Sbjct: 106 ctactgctgggcgcactgcaccctctgcccgccgcccggcatatcctcgtcctcgtcata 165
Query: 397 ggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtcgta 453
||||||||| || ||||||||| ||||||||||||| || || |||| | ||||||
Sbjct: 166 ggcctcctgcgcctgctgctgctgctgcctccgcatctcttcctcaatgtctatgtcgta 225
Query: 454 cgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggcttggg 513
| ||| ||||||||||||||||||||||||||||| |||||||| ||| | ||||||||
Sbjct: 226 ggccatcgtctcctcgcactcgtctagctccatgtccgtgtactgcgatgccggcttggg 285
Query: 514 cgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactccac 573
|||||| || ||| |||||||||||||| ||| |||||| |||||| ||||| | ||
Sbjct: 286 cgggaggaccgtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaac 345
Query: 574 cgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgccttc 633
|| ||||| ||||| |||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 346 cgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctc 405
Query: 634 atcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgatcag 693
|||||||| |||||||| ||||||||||| |||||||| || ||||| || ||||| ||
Sbjct: 406 gtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgatgag 465
Query: 694 cagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagtcaa 753
|||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||||
Sbjct: 466 cagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgtcag 525
Query: 754 ggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctcctt 813
|||||| |||||||| ||||||||||| ||| |||| | |||||| ||||| |||| |||
Sbjct: 526 ggtcagggtgtgctcatagaagaggtcgtcggccttccgcttgaatttggggtgctnctt 585
Query: 814 ctgctg 819
||||||
Sbjct: 586 ctgctg 591
>gb|BQ754405.1|BQ754405 EBca01_SQ003_N18_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ003_N18 5', mRNA sequence
Length = 393
Score = 355 bits (179), Expect = 3e-096
Identities = 260/285 (91%), Gaps = 4/285 (1%)
Strand = Plus / Minus
Query: 1329 caaagaatgactggaatatgtcaaagggatcgtgcatccctccaccacctcccattccct 1388
|||||||||| ||||| |||||||| |||| |||||| ||||||||||||||||||||
Sbjct: 393 caaagaatga-tggaagatgtcaaatggatggtgcat---tccaccacctcccattccct 338
Query: 1389 ccttgagggcatcctcaccatattgatcataaatctctcgcttttcaggatcactgagga 1448
| |||||||||||||||||||| |||||||| ||||||||||| ||||||||||| | ||
Sbjct: 337 ctttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatcactcaaga 278
Query: 1449 cctcataagcctgagctagctccttgaacttctcgggatcgccgcccttgtcggggtggt 1508
| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 277 cttcataagcttgagctagctccttgaacttctcggggtcgccgcccttgtcggggtggt 218
Query: 1509 tcttgatggcggccttgcggtaggccttcttgaggtcatcctgggacgcgtctttggaga 1568
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
Sbjct: 217 tcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtccttgggca 158
Query: 1569 ccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggcg 1613
| || |||||||||||||| || ||| ||||||||||||||||||
Sbjct: 157 cgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcg 113
>gb|AV918185.1|AV918185 AV918185 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c14 3', mRNA sequence
Length = 617
Score = 345 bits (174), Expect = 3e-093
Identities = 445/534 (83%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 78 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 137
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 138 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 197
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 198 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 257
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 258 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 317
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 318 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 377
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 378 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 437
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 438 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 497
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||||
Sbjct: 498 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 557
Query: 811 cttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
|||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 558 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 611
>gb|AV935618.1|AV935618 AV935618 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4o07 3', mRNA sequence
Length = 636
Score = 345 bits (174), Expect = 3e-093
Identities = 445/534 (83%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 98 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 157
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 158 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 217
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 218 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 277
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 278 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 337
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 338 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 397
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 398 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 457
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 458 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 517
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||||
Sbjct: 518 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 577
Query: 811 cttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
|||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 578 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 631
>gb|BJ547912.1|BJ547912 BJ547912 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41i05 5', mRNA sequence
Length = 722
Score = 345 bits (174), Expect = 3e-093
Identities = 445/534 (83%), Gaps = 6/534 (1%)
Strand = Plus / Minus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 691 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 632
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 631 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 572
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 571 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 512
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 511 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 452
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 451 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 392
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 391 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 332
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 331 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 272
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||||
Sbjct: 271 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 212
Query: 811 cttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
|||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 211 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 158
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 890 gcttcatcagcttcgccagggaatgtgatcttctgcccgttctgcatacctttctcaact 949
|||||||| || ||||||||||| ||||||||||| || | ||||||||| ||||| ||
Sbjct: 165 gcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctcgacc 106
Query: 950 accacttcaagaactttcttctc 972
||||| || || |||||||||||
Sbjct: 105 accacctccaggactttcttctc 83
>gb|BJ548555.1|BJ548555 BJ548555 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30b23 3', mRNA sequence
Length = 667
Score = 345 bits (174), Expect = 3e-093
Identities = 445/534 (83%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 85 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 144
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 145 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 204
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 205 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 264
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 265 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 324
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 384
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 385 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 444
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 445 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 504
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||||
Sbjct: 505 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 564
Query: 811 cttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
|||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 565 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 618
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 890 gcttcatcagcttcgccagggaatgtgatcttctgcccgttctgcatacctttctc 945
|||||||| || ||||||||||| ||||||||||| || | ||||||||| |||||
Sbjct: 611 gcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 666
>gb|BJ548639.1|BJ548639 BJ548639 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31m24 3', mRNA sequence
Length = 668
Score = 345 bits (174), Expect = 3e-093
Identities = 445/534 (83%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 86 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 145
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 146 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 205
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 206 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 265
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 266 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 325
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 326 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 385
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 386 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 445
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 446 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 505
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||||
Sbjct: 506 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 565
Query: 811 cttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
|||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 566 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 619
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 890 gcttcatcagcttcgccagggaatgtgatcttctgcccgttctgcatacctttctc 945
|||||||| || ||||||||||| ||||||||||| || | ||||||||| |||||
Sbjct: 612 gcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 667
>gb|BJ549776.1|BJ549776 BJ549776 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31o09 3', mRNA sequence
Length = 668
Score = 345 bits (174), Expect = 3e-093
Identities = 445/534 (83%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 85 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 144
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 145 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 204
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 205 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 264
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 265 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 324
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 384
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 385 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 444
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 445 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 504
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||||
Sbjct: 505 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 564
Query: 811 cttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
|||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 565 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 618
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 890 gcttcatcagcttcgccagggaatgtgatcttctgcccgttctgcatacctttctc 945
|||||||| || ||||||||||| ||||||||||| || | ||||||||| |||||
Sbjct: 611 gcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 666
>gb|BJ549828.1|BJ549828 BJ549828 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33e03 3', mRNA sequence
Length = 661
Score = 345 bits (174), Expect = 3e-093
Identities = 445/534 (83%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 86 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 145
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 146 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 205
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 206 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 265
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 266 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 325
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 326 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 385
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 386 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 445
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 446 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 505
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||||
Sbjct: 506 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 565
Query: 811 cttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
|||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 566 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 619
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 890 gcttcatcagcttcgccagggaatgtgatcttctgcccgttctgcatacc 939
|||||||| || ||||||||||| ||||||||||| || | |||||||||
Sbjct: 612 gcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacc 661
>gb|BJ549026.1|BJ549026 BJ549026 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38p02 3', mRNA sequence
Length = 665
Score = 339 bits (171), Expect = 2e-091
Identities = 444/534 (83%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 82 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 141
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 142 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 201
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 202 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 261
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 262 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 321
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 322 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 381
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 382 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 441
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 442 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 501
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||||
Sbjct: 502 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 561
Query: 811 cttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
|||||||||||| || ||||| || ||| ||||| |||||||| ||||||||
Sbjct: 562 cttctgctggaggacgaagattatgtctncagtgacggtatcaggcgcttcatc 615
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 890 gcttcatcagcttcgccagggaatgtgatcttctgcccgttctgcatacctttctc 945
|||||||| || ||||||||||| ||||||||||| || | ||||||||| |||||
Sbjct: 608 gcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 663
>gb|BF616622.2|BF616622 HVSMEc0010N09f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0010N09f, mRNA sequence
Length = 800
Score = 337 bits (170), Expect = 7e-091
Identities = 223/241 (92%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
|||| ||||||||| || |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 353 ccacntcccattccatctttgagggcatcctcaccatactgatcatagatctctcgcttc 294
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 293 tcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtcgccg 234
Query: 1493 cccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgg 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 233 cccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgg 174
Query: 1553 gacgcgtctttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttcttcggc 1612
|||||||| |||| || || |||||||||||||| || ||| |||||||||||||||||
Sbjct: 173 gacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggc 114
Query: 1613 g 1613
|
Sbjct: 113 g 113
>gb|AV918791.1|AV918791 AV918791 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22e10 3', mRNA sequence
Length = 668
Score = 331 bits (167), Expect = 4e-089
Identities = 445/535 (83%), Gaps = 7/535 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 80 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 139
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 140 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 199
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 200 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 259
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 260 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 319
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 320 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 379
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 380 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 439
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagag-attcag 749
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || |
Sbjct: 440 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggccctccg 499
Query: 750 tcaaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgct 809
||| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| ||||
Sbjct: 500 tcagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgct 559
Query: 810 ccttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
||||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 560 ccttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 614
Score = 42.1 bits (21), Expect = 0.057
Identities = 49/57 (85%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 890 gcttcatcagcttcgccaggg-aatgtgatcttctgcccgttctgcatacctttctc 945
|||||||| || ||||||||| || ||||||||||| || | ||||||||| |||||
Sbjct: 607 gcttcatctgcctcgccaggggaaggtgatcttctgtccatgctgcatacccttctc 663
>gb|AV931194.1|AV931194 AV931194 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18o07 3', mRNA sequence
Length = 651
Score = 331 bits (167), Expect = 4e-089
Identities = 445/535 (83%), Gaps = 7/535 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 113 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 172
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 173 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 232
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 233 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 292
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 293 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 352
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 353 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 412
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 413 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 472
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagag-attcag 749
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || |
Sbjct: 473 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggccctccg 532
Query: 750 tcaaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgct 809
||| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| ||||
Sbjct: 533 tcagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgct 592
Query: 810 ccttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
||||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 593 ccttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 647
>gb|AV932812.1|AV932812 AV932812 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4d04 5', mRNA sequence
Length = 697
Score = 331 bits (167), Expect = 4e-089
Identities = 445/535 (83%), Gaps = 7/535 (1%)
Strand = Plus / Minus
Query: 337 ctactgctgggcgcactgca-ccctctgcccaccgcct---ggcacatcatcatcctcgt 392
|||||||||||||||||||| |||||||||| ||||| |||| ||| || |||||||
Sbjct: 694 ctactgctgggcgcactgcaaccctctgcccgccgccgcccggcatatcctcgtcctcgt 635
Query: 393 cgtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgt 449
| ||||||||||| || |||||||| ||||||||||||| || || |||| | |
Sbjct: 634 cataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatat 575
Query: 450 cgtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggct 509
|||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | ||||
Sbjct: 574 cgtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggct 515
Query: 510 tgggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaact 569
|||||||||| || ||| |||||||||||||| ||| ||||| |||||| |||||
Sbjct: 514 tgggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaa 455
Query: 570 ccaccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgc 629
|||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 454 ccaccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgc 395
Query: 630 cttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttga 689
| || |||||||| |||||||| ||||||||||| |||||||| || ||||| || ||||
Sbjct: 394 cctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttga 335
Query: 690 tcagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcag 749
| |||||||| ||| |||||| |||| || ||| | ||||||||||| || | || |
Sbjct: 334 tgagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccg 275
Query: 750 tcaaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgct 809
||| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| ||||
Sbjct: 274 tcagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgct 215
Query: 810 ccttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
||||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 214 ccttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 160
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 890 gcttcatcagcttcgccagggaatgtgatcttctgcccgttctgcatacctttctcaact 949
|||||||| || ||||||||||| ||||||||||| || | ||||||||| ||||| ||
Sbjct: 167 gcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctcgacc 108
Query: 950 accacttcaagaactttcttctc 972
||||| || || |||||||||||
Sbjct: 107 accacctccaggactttcttctc 85
>gb|BJ451484.1|BJ451484 BJ451484 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34c22 5', mRNA sequence
Length = 585
Score = 331 bits (167), Expect = 4e-089
Identities = 383/455 (84%)
Strand = Plus / Minus
Query: 410 tgctgctgccgcctccgcatctcctcttcgatgttcacgtcgtacgtcattgtctcctcg 469
||||||||| ||||||||||||| || || |||| | |||||| | ||| |||||||||
Sbjct: 576 tgctgctgctgcctccgcatctcttcctcaatgtctatgtcgtaggccatcgtctcctcg 517
Query: 470 cactcgtctagctccatgtcagtgtactgtgatactggcttgggcgggagaacaacctcc 529
|||||||||||||||||||| |||||||| ||| | |||||||||||||| || |||
Sbjct: 516 cactcgtctagctccatgtccgtgtactgcgatgccggcttgggcgggaggaccgtctcg 457
Query: 530 agggccttgcactgctccgggctcaacgagtccgggaactccaccgaaaagtgaatgtac 589
|||||||||||||| ||| |||||| |||||| ||||| | |||| ||||| |||||
Sbjct: 456 agggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtggatgtag 397
Query: 590 agcttgcccttcatgaagggcctctgatacatgggcatgccttcatcgttgattgccttg 649
|||||||||||||||||||||||||| |||||||||||||| || |||||||| ||||||
Sbjct: 396 agcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatcgccttg 337
Query: 650 aaagaatcaggcttcacaacttcaccagggttcgatttgatcagcagctgcctgttatcc 709
|| ||||||||||| |||||||| || ||||| || ||||| |||||||| ||| ||||
Sbjct: 336 aatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctgccatcc 277
Query: 710 aagtgagtcagaacaaactggaagccacacagagattcagtcaaggtcagtgtgtgctcg 769
|| |||| || ||| | ||||||||||| || | || |||| |||||| ||||||||
Sbjct: 276 aaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtgtgctca 217
Query: 770 tagaagaggtcatcgccctttctcttgaacttgggatgctccttctgctggagaacaaag 829
||||||||||| ||| |||| | |||||| ||||| ||||||||||||||||| || |||
Sbjct: 216 tagaagaggtcgtcggccttccgcttgaatttggggtgctccttctgctggaggacgaag 157
Query: 830 atgatatctccagtggtagtatcaggtgcttcatc 864
|| || ||||||||| |||||||| ||||||||
Sbjct: 156 attatgtctccagtgacggtatcaggcgcttcatc 122
Score = 61.9 bits (31), Expect = 6e-008
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 890 gcttcatcagcttcgccagggaatgtgatcttctgcccgttctgcatacctttctcaact 949
|||||||| || || |||||||| ||||||||||| || | ||||||||| ||||| ||
Sbjct: 129 gcttcatctgcctctccagggaaggtgatcttctgtccatgctgcatacccttctcgacc 70
Query: 950 accacttcaagaactttcttctc 972
||||| || || |||||||||||
Sbjct: 69 accacctccaggactttcttctc 47
>gb|AV913493.1|AV913493 AV913493 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22e10 5', mRNA sequence
Length = 614
Score = 329 bits (166), Expect = 2e-088
Identities = 422/506 (83%), Gaps = 6/506 (1%)
Strand = Plus / Minus
Query: 890 gcttcatcagcttcgccagggaatgtgatcttctgcccgttctgcatacctttctcaact 949
|||||||| || ||||||||||| ||||||||||| || | ||||||||| ||||| ||
Sbjct: 506 gcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctcgacc 447
Query: 950 accacttcaagaactttcttctccggcacaactttatcacctttgcattgtgggcatcta 1009
||||| || || ||||||||||| | || || || ||||| ||||| || ||| | |
Sbjct: 446 accacctccaggactttcttctcgtgaaccaccttctcacccttgcactgcccgcaacga 387
Query: 1010 tccttatcgctgatggtctctccagaacccttgcactcattgcaaggatgctgcatttgc 1069
|||||||| ||||||||||| ||| ||| ||||||||||||| || ||||||||||||
Sbjct: 386 tccttatcactgatggtctcaccacttcccctgcactcattgcagggctgctgcatttgc 327
Query: 1070 tgaatcattccaggccccaactgccggatttggaccttaaagccagaaccttggcaacca 1129
|| |||||||| || |||| ||||| ||| |||||||| | |||| ||||||||| ||
Sbjct: 326 tgtatcattcctggtcccagctgcctgatctggaccttgtaaccagcaccttggcagccg 267
Query: 1130 gcacacctcgatgaagctccagactttgaacccttaccattgcacttggagcagagaaca 1189
|||||| || ||||||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 266 gcacacttcatggaagctccagactttgaacccttgccattgcactttgagcagagcaca 207
Query: 1190 ctgcgggacagagagagcttctttgatgtgccattgtacaaatcctccagagaaaccttt 1249
|||||| |||||||| ||||| ||||| ||||||||||| ||||| || ||||||
Sbjct: 206 ttgcgggcaagagagagtttcttcgatgttccattgtacaactcctcaaggctaaccttc 147
Query: 1250 agaggatgaaccacatcctctccccttcgctgccttctgcccctactgctgccaccacct 1309
|||||||||||||||||||| ||||| ||||| | |||||||| |||||||||||||||
Sbjct: 146 agaggatgaaccacatcctcacccctgcgctgacgcctgcccctgctgctgccaccacct 87
Query: 1310 ccaaaagg---gcttccaccaccaaagaatgactggaatatgtcaaagggatcgtgcatc 1366
||||| || || ||||||||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 86 ccaaaggggttgccaccaccaccaaagaatgattggaagatgtcaaatggatcatgcat- 28
Query: 1367 cctccaccacctcccattccctcctt 1392
|||||| |||||||||||||||||
Sbjct: 27 --tccaccgcctcccattccctcctt 4
Score = 87.7 bits (44), Expect = 1e-015
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 749 gtcaaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgc 808
|||| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||
Sbjct: 614 gtcagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgc 555
Query: 809 tccttctgctggagaacaaagatgatatctccagtggtagtatcaggtgcttcatc 864
|||||||||||||| || ||||| || ||||||||| |||||||| ||||||||
Sbjct: 554 tccttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 499
>gb|BF616389.2|BF616389 HVSMEc0007C16f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0007C16f, mRNA sequence
Length = 605
Score = 327 bits (165), Expect = 7e-088
Identities = 225/245 (91%)
Strand = Plus / Minus
Query: 1369 tccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcg 1428
||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 322 tccacgacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 263
Query: 1429 cttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatc 1488
||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 262 cttatcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 203
Query: 1489 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatc 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 202 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 143
Query: 1549 ctgggacgcgtctttggagaccccgaggatctcgtagtaccgtgtgttgtcgctcttctt 1608
| ||||||||| |||| || || |||||||||||||| || ||| ||| | |||||||
Sbjct: 142 ttaggacgcgtcattgggcacgcccaggatctcgtagtagcgcgtgctgtggatcttctt 83
Query: 1609 cggcg 1613
|||||
Sbjct: 82 cggcg 78
>gb|AV936347.1|AV936347 AV936347 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10p23 3', mRNA sequence
Length = 595
Score = 325 bits (164), Expect = 3e-087
Identities = 411/492 (83%), Gaps = 6/492 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 100 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 159
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 160 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 219
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 220 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 279
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 280 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 339
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 340 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 399
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 400 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 459
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 460 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 519
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||||
Sbjct: 520 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 579
Query: 811 cttctgctggag 822
||||||||||||
Sbjct: 580 cttctgctggag 591
>gb|BJ548460.1|BJ548460 BJ548460 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25k12 3', mRNA sequence
Length = 584
Score = 325 bits (164), Expect = 3e-087
Identities = 411/492 (83%), Gaps = 6/492 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 93 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 152
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 153 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 212
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 213 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 272
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 273 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 332
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 333 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 392
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 393 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 452
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 453 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 512
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||||
Sbjct: 513 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 572
Query: 811 cttctgctggag 822
||||||||||||
Sbjct: 573 cttctgctggag 584
>gb|BJ548534.1|BJ548534 BJ548534 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29p02 3', mRNA sequence
Length = 576
Score = 325 bits (164), Expect = 3e-087
Identities = 411/492 (83%), Gaps = 6/492 (1%)
Strand = Plus / Plus
Query: 337 ctactgctgggcgcactgcaccctctgcccaccgcct---ggcacatcatcatcctcgtc 393
|||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||||
Sbjct: 81 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 140
Query: 394 gtaggcctcctgg---tggtgctgctgccgcctccgcatctcctcttcgatgttcacgtc 450
||||||||||| || |||||||| ||||||||||||| || || |||| | ||
Sbjct: 141 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 200
Query: 451 gtacgtcattgtctcctcgcactcgtctagctccatgtcagtgtactgtgatactggctt 510
||| | ||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 201 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 260
Query: 511 gggcgggagaacaacctccagggccttgcactgctccgggctcaacgagtccgggaactc 570
||||||||| || ||| |||||||||||||| ||| ||||| |||||| ||||| |
Sbjct: 261 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 320
Query: 571 caccgaaaagtgaatgtacagcttgcccttcatgaagggcctctgatacatgggcatgcc 630
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 380
Query: 631 ttcatcgttgattgccttgaaagaatcaggcttcacaacttcaccagggttcgatttgat 690
|| |||||||| |||||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 381 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 440
Query: 691 cagcagctgcctgttatccaagtgagtcagaacaaactggaagccacacagagattcagt 750
|||||||| ||| |||||| |||| || ||| | ||||||||||| || | || ||
Sbjct: 441 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 500
Query: 751 caaggtcagtgtgtgctcgtagaagaggtcatcgccctttctcttgaacttgggatgctc 810
|| |||||| |||||||| ||||||||||| || |||| | |||||| ||||| |||||
Sbjct: 501 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 560
Query: 811 cttctgctggag 822
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Sbjct: 561 cttctgctggag 572
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 200,583
Number of Sequences: 312970
Number of extensions: 200583
Number of successful extensions: 58966
Number of sequences better than 0.5: 234
Number of HSP's better than 0.5 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57937
Number of HSP's gapped (non-prelim): 816
length of query: 1629
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1610
effective length of database: 169,188,109
effective search space: 272392855490
effective search space used: 272392855490
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)