BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161295.2.1
(1475 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF627578.2|BF627578 HVSMEb0005D17f Hordeum vulgare seedl... 662 0.0
gb|BM816655.1|BM816655 HB01A07_T3.ab1 HB Hordeum vulgare su... 658 0.0
gb|BU972745.1|BU972745 HB22J12r BC Hordeum vulgare subsp. v... 644 0.0
gb|BU996667.1|BU996667 HM14F14r HM Hordeum vulgare subsp. v... 613 e-174
gb|BJ544684.1|BJ544684 BJ544684 K. Sato unpublished cDNA li... 605 e-171
gb|BM443008.2|BM443008 EBro02_SQ002_C21_R root, 3 week, hyd... 555 e-156
gb|AV914847.1|AV914847 AV914847 K. Sato unpublished cDNA li... 527 e-148
gb|BQ471753.1|BQ471753 HV03F22r HV Hordeum vulgare subsp. v... 507 e-142
gb|BU969174.1|BU969174 HB10M08r BC Hordeum vulgare subsp. v... 498 e-139
gb|AV914112.1|AV914112 AV914112 K. Sato unpublished cDNA li... 496 e-138
gb|CA002810.1|CA002810 HS08J14r HS Hordeum vulgare subsp. v... 492 e-137
gb|AV915891.1|AV915891 AV915891 K. Sato unpublished cDNA li... 486 e-135
gb|BU988947.1|BU988947 HF19D20r HF Hordeum vulgare subsp. v... 486 e-135
gb|AV921006.1|AV921006 AV921006 K. Sato unpublished cDNA li... 458 e-127
gb|AV919157.1|AV919157 AV919157 K. Sato unpublished cDNA li... 422 e-116
gb|BJ549498.1|BJ549498 BJ549498 K. Sato unpublished cDNA li... 418 e-115
gb|BF258204.2|BF258204 HVSMEf0015B12f Hordeum vulgare seedl... 412 e-113
gb|BJ547041.1|BJ547041 BJ547041 K. Sato unpublished cDNA li... 379 e-103
gb|BG301258.2|BG301258 HVSMEb0020E14f Hordeum vulgare seedl... 357 7e-097
gb|BJ548879.1|BJ548879 BJ548879 K. Sato unpublished cDNA li... 357 7e-097
gb|BF253522.3|BF253522 HVSMEf0001C17f Hordeum vulgare seedl... 355 3e-096
gb|BE519855.1|BE519855 HV_CEb0021H15f Hordeum vulgare seedl... 333 1e-089
gb|BJ546337.1|BJ546337 BJ546337 K. Sato unpublished cDNA li... 329 2e-088
gb|BU970828.1|BU970828 HB15M21r BC Hordeum vulgare subsp. v... 327 6e-088
gb|BI958920.1|BI958920 HVSMEn0017D23f Hordeum vulgare rachi... 321 4e-086
gb|BJ449493.1|BJ449493 BJ449493 K. Sato unpublished cDNA li... 319 1e-085
gb|BF256948.2|BF256948 HVSMEf0011H06f Hordeum vulgare seedl... 301 3e-080
gb|BQ757608.1|BQ757608 EBem10_SQ004_K13_R embryo, 2 Day ger... 299 1e-079
gb|AL510717.1|AL510717 AL510717 Hordeum vulgare Barke devel... 297 5e-079
gb|BJ546155.1|BJ546155 BJ546155 K. Sato unpublished cDNA li... 295 2e-078
gb|CV062330.1|CV062330 BNEL78h1 Barley EST endosperm librar... 295 2e-078
gb|CV063225.1|CV063225 BNEL88a10 Barley EST endosperm libra... 295 2e-078
gb|AV911559.1|AV911559 AV911559 K. Sato unpublished cDNA li... 291 3e-077
gb|BI960078.1|BI960078 HVSMEn0023C04f Hordeum vulgare rachi... 283 8e-075
gb|BM442828.2|BM442828 EBro02_SQ001_H02_R root, 3 week, hyd... 281 3e-074
gb|BQ756196.1|BQ756196 EBem05_SQ004_C06_R embryo, 14 DPA, n... 266 2e-069
gb|BG416704.2|BG416704 HVSMEk0014D01f Hordeum vulgare testa... 262 3e-068
gb|BI954503.1|BI954503 HVSMEm0018E24f Hordeum vulgare green... 260 1e-067
gb|BM443269.2|BM443269 EBro02_SQ003_F16_R root, 3 week, hyd... 260 1e-067
gb|BF260520.3|BF260520 HVSMEf0022D16f Hordeum vulgare seedl... 252 3e-065
gb|AJ463159.1|AJ463159 AJ463159 S00002 Hordeum vulgare subs... 240 1e-061
gb|AV909659.1|AV909659 AV909659 K. Sato unpublished cDNA li... 236 2e-060
gb|AJ463158.1|AJ463158 AJ463158 S00002 Hordeum vulgare subs... 234 7e-060
gb|AL505147.1|AL505147 AL505147 Hordeum vulgare Barke roots... 232 3e-059
gb|BJ549915.1|BJ549915 BJ549915 K. Sato unpublished cDNA li... 228 4e-058
gb|BE215685.3|BE215685 HV_CEb0007P22f Hordeum vulgare seedl... 226 2e-057
gb|BJ464354.1|BJ464354 BJ464354 K. Sato unpublished cDNA li... 218 4e-055
gb|AL502423.1|AL502423 AL502423 Hordeum vulgare Barke roots... 214 6e-054
gb|BF620279.2|BF620279 HVSMEc0019E20f Hordeum vulgare seedl... 214 6e-054
gb|BU972129.1|BU972129 HB20L03r BC Hordeum vulgare subsp. v... 214 6e-054
gb|BE455469.2|BE455469 HVSMEg0017F01f Hordeum vulgare pre-a... 202 2e-050
gb|CB879349.1|CB879349 HP11N15T HP Hordeum vulgare subsp. v... 200 9e-050
gb|BF631172.1|BF631172 HVSMEb0015C21f Hordeum vulgare seedl... 198 4e-049
gb|BF259502.2|BF259502 HVSMEf0019I02f Hordeum vulgare seedl... 188 4e-046
gb|BG418221.1|BG418221 HVSMEk0021P03f Hordeum vulgare testa... 182 2e-044
gb|BM370165.2|BM370165 EBro08_SQ003_D02_R root, 3 week, dro... 182 2e-044
gb|AJ436651.1|AJ436651 AJ436651 S00002 Hordeum vulgare subs... 176 1e-042
gb|CA017471.1|CA017471 HV05E22r HV Hordeum vulgare subsp. v... 172 2e-041
gb|BQ757060.1|BQ757060 EBem10_SQ002_K18_R embryo, 2 Day ger... 168 3e-040
gb|BJ456934.1|BJ456934 BJ456934 K. Sato unpublished cDNA li... 163 2e-038
gb|BM096802.2|BM096802 EBma07_SQ001_L07_R maternal, 21 DPA,... 157 1e-036
gb|BJ544855.1|BJ544855 BJ544855 K. Sato unpublished cDNA li... 145 5e-033
gb|BI947157.1|BI947157 HVSMEl0003P09f Hordeum vulgare spike... 143 2e-032
gb|BQ757374.1|BQ757374 EBem10_SQ003_O19_R embryo, 2 Day ger... 139 3e-031
gb|CB877081.1|CB877081 HP03I02T HP Hordeum vulgare subsp. v... 125 4e-027
gb|BI951009.1|BI951009 HVSMEl0024A04f Hordeum vulgare spike... 123 2e-026
gb|BE060857.3|BE060857 HVSMEg0013J21f Hordeum vulgare pre-a... 123 2e-026
gb|CA027837.1|CA027837 HZ60D01r HZ Hordeum vulgare subsp. v... 123 2e-026
gb|CB879741.1|CB879741 HP03I02w HP Hordeum vulgare subsp. v... 119 3e-025
gb|BQ763370.1|BQ763370 EBro02_SQ008_K01_R root, 3 week, hyd... 115 4e-024
gb|BU972342.1|BU972342 HB21G01r BC Hordeum vulgare subsp. v... 107 1e-021
gb|BM096716.2|BM096716 EBma07_SQ001_G01_R maternal, 21 DPA,... 101 6e-020
gb|BU979918.1|BU979918 HA17M18r HA Hordeum vulgare subsp. v... 101 6e-020
gb|BJ547904.1|BJ547904 BJ547904 K. Sato unpublished cDNA li... 101 6e-020
gb|BU982278.1|BU982278 HA26A18r HA Hordeum vulgare subsp. v... 86 4e-015
gb|CB877082.1|CB877082 HP03I03T HP Hordeum vulgare subsp. v... 86 4e-015
gb|AL503252.1|AL503252 AL503252 Hordeum vulgare Barke roots... 66 4e-009
gb|AL506572.1|AL506572 AL506572 Hordeum vulgare Barke devel... 66 4e-009
gb|AL506691.1|AL506691 AL506691 Hordeum vulgare Barke devel... 66 4e-009
gb|AL507716.1|AL507716 AL507716 Hordeum vulgare Barke devel... 66 4e-009
gb|BF255870.2|BF255870 HVSMEf0008A22f Hordeum vulgare seedl... 66 4e-009
gb|BF260905.2|BF260905 HVSMEf0023E01f Hordeum vulgare seedl... 66 4e-009
gb|BE454127.2|BE454127 HVSMEh0080M10f Hordeum vulgare 5-45 ... 66 4e-009
gb|BI946633.1|BI946633 HVSMEl0001F12f Hordeum vulgare spike... 66 4e-009
gb|BI959050.1|BI959050 HVSMEn0017O17f Hordeum vulgare rachi... 66 4e-009
gb|BI959464.1|BI959464 HVSMEn0019M08f Hordeum vulgare rachi... 66 4e-009
gb|BI960239.1|BI960239 HVSMEn0023O02f Hordeum vulgare rachi... 66 4e-009
gb|BI960443.1|BI960443 HVSMEn0024J22f Hordeum vulgare rachi... 66 4e-009
gb|BE231175.2|BE231175 HVSMEg0017G06f Hordeum vulgare pre-a... 66 4e-009
gb|AW983194.3|AW983194 HVSMEg0008K01f Hordeum vulgare pre-a... 66 4e-009
gb|AV910273.1|AV910273 AV910273 K. Sato unpublished cDNA li... 66 4e-009
gb|AV912858.1|AV912858 AV912858 K. Sato unpublished cDNA li... 66 4e-009
gb|AV913541.1|AV913541 AV913541 K. Sato unpublished cDNA li... 66 4e-009
gb|AV913569.1|AV913569 AV913569 K. Sato unpublished cDNA li... 66 4e-009
gb|AV913652.1|AV913652 AV913652 K. Sato unpublished cDNA li... 66 4e-009
gb|AV913736.1|AV913736 AV913736 K. Sato unpublished cDNA li... 66 4e-009
gb|AV914047.1|AV914047 AV914047 K. Sato unpublished cDNA li... 66 4e-009
gb|AV915529.1|AV915529 AV915529 K. Sato unpublished cDNA li... 66 4e-009
gb|AV915934.1|AV915934 AV915934 K. Sato unpublished cDNA li... 66 4e-009
gb|AV916097.1|AV916097 AV916097 K. Sato unpublished cDNA li... 66 4e-009
gb|AV916858.1|AV916858 AV916858 K. Sato unpublished cDNA li... 66 4e-009
gb|AV917183.1|AV917183 AV917183 K. Sato unpublished cDNA li... 66 4e-009
gb|BM816179.1|BM816179 HC02E01_T3.ab1 HC Hordeum vulgare su... 66 4e-009
gb|BJ450393.1|BJ450393 BJ450393 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ454281.1|BJ454281 BJ454281 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ462500.1|BJ462500 BJ462500 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ462617.1|BJ462617 BJ462617 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ463235.1|BJ463235 BJ463235 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ463694.1|BJ463694 BJ463694 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ464032.1|BJ464032 BJ464032 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ464187.1|BJ464187 BJ464187 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ464470.1|BJ464470 BJ464470 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ464957.1|BJ464957 BJ464957 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ465124.1|BJ465124 BJ465124 K. Sato unpublished cDNA li... 66 4e-009
gb|BQ471323.1|BQ471323 HV02B15r HV Hordeum vulgare subsp. v... 66 4e-009
gb|BQ472096.1|BQ472096 HV04G11r HV Hordeum vulgare subsp. v... 66 4e-009
gb|BQ472320.1|BQ472320 HB09P05T BC Hordeum vulgare subsp. v... 66 4e-009
gb|BQ472535.1|BQ472535 HB09E05T BC Hordeum vulgare subsp. v... 66 4e-009
gb|BM100357.2|BM100357 EBma01_SQ001_P14_R maternal, 4 DPA, ... 66 4e-009
gb|BM372796.2|BM372796 EBpi05_SQ003_P06_R pistil, 8 DPA, no... 66 4e-009
gb|BM096945.2|BM096945 EBpi07_SQ001_O03_R pistil, 12 DPA, n... 66 4e-009
gb|BM443026.2|BM443026 EBro02_SQ002_D20_R root, 3 week, hyd... 66 4e-009
gb|BM443503.2|BM443503 EBro02_SQ005_G14_R root, 3 week, hyd... 66 4e-009
gb|BI777152.2|BI777152 EBro03_SQ002_C19_R root, 3 week, wat... 66 4e-009
gb|BM371206.2|BM371206 EBro04_SQ003_N12_R root, 3 week, sal... 66 4e-009
gb|BQ759253.1|BQ759253 EBpi01_SQ003_D23_R pistil, 1 DPA, no... 66 4e-009
gb|BQ762329.1|BQ762329 EBro01_SQ005_C16_R root, 3 week, hyd... 66 4e-009
gb|BQ764503.1|BQ764503 EBca01_SQ004_F05_R carpel, pre-anthe... 66 4e-009
gb|BU968354.1|BU968354 HB07E05r BC Hordeum vulgare subsp. v... 66 4e-009
gb|BU968575.1|BU968575 HB07P05r BC Hordeum vulgare subsp. v... 66 4e-009
gb|BU970086.1|BU970086 HB13I23r BC Hordeum vulgare subsp. v... 66 4e-009
gb|BU970369.1|BU970369 HB14G11r BC Hordeum vulgare subsp. v... 66 4e-009
gb|BU973256.1|BU973256 HB24E24r BC Hordeum vulgare subsp. v... 66 4e-009
gb|BU987452.1|BU987452 HF14M18r HF Hordeum vulgare subsp. v... 66 4e-009
gb|BU988522.1|BU988522 HF17O04r HF Hordeum vulgare subsp. v... 66 4e-009
gb|BU994833.1|BU994833 HM08F16r HM Hordeum vulgare subsp. v... 66 4e-009
gb|BU997112.1|BU997112 HI06P03r HI Hordeum vulgare subsp. v... 66 4e-009
gb|CA018953.1|CA018953 HV10D08r HV Hordeum vulgare subsp. v... 66 4e-009
gb|CA029444.1|CA029444 HZ65D19r HZ Hordeum vulgare subsp. v... 66 4e-009
gb|CA032127.1|CA032127 HX12B15r HX Hordeum vulgare subsp. v... 66 4e-009
gb|CB883216.1|CB883216 HQ01I23w HQ Hordeum vulgare subsp. v... 66 4e-009
gb|CB883635.1|CB883635 HQ02N10w HQ Hordeum vulgare subsp. v... 66 4e-009
gb|BQ470611.1|BQ470611 HX03H22r HX Hordeum vulgare subsp. v... 64 1e-008
gb|CA028466.1|CA028466 HZ62B03r HZ Hordeum vulgare subsp. v... 64 1e-008
gb|AL505134.1|AL505134 AL505134 Hordeum vulgare Barke roots... 62 6e-008
gb|AL506538.1|AL506538 AL506538 Hordeum vulgare Barke devel... 62 6e-008
gb|AL503569.1|AL503569 AL503569 Hordeum vulgare Barke roots... 60 2e-007
gb|AV915820.1|AV915820 AV915820 K. Sato unpublished cDNA li... 60 2e-007
gb|AV917132.1|AV917132 AV917132 K. Sato unpublished cDNA li... 60 2e-007
gb|BJ465044.1|BJ465044 BJ465044 K. Sato unpublished cDNA li... 60 2e-007
gb|BF256552.2|BF256552 HVSMEf0010F04f Hordeum vulgare seedl... 58 9e-007
gb|BF260651.2|BF260651 HVSMEf0022J07f Hordeum vulgare seedl... 58 9e-007
gb|BI960578.1|BI960578 HVSMEn0025C16f Hordeum vulgare rachi... 58 9e-007
gb|BM370094.2|BM370094 EBro08_SQ002_P14_R root, 3 week, dro... 58 9e-007
gb|CB883563.1|CB883563 HQ02K03w HQ Hordeum vulgare subsp. v... 58 9e-007
gb|CK123742.1|CK123742 BES1824105d21 BES1824 Hordeum vulgar... 58 9e-007
gb|AV909217.1|AV909217 AV909217 K. Sato unpublished cDNA li... 56 3e-006
gb|AV911101.1|AV911101 AV911101 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ477449.1|BJ477449 BJ477449 K. Sato unpublished cDNA li... 56 3e-006
gb|AL504464.1|AL504464 AL504464 Hordeum vulgare Barke roots... 54 1e-005
gb|BI956677.1|BI956677 HVSMEn0004L08f Hordeum vulgare rachi... 54 1e-005
gb|BI959302.1|BI959302 HVSMEn0019C13f Hordeum vulgare rachi... 54 1e-005
gb|CA017402.1|CA017402 HV05B15r HV Hordeum vulgare subsp. v... 54 1e-005
gb|AL508905.1|AL508905 AL508905 Hordeum vulgare Barke devel... 52 5e-005
gb|BF258305.2|BF258305 HVSMEf0015F24f Hordeum vulgare seedl... 52 5e-005
gb|BF254210.3|BF254210 HVSMEf0003F07f Hordeum vulgare seedl... 52 5e-005
gb|AV917603.1|AV917603 AV917603 K. Sato unpublished cDNA li... 52 5e-005
gb|AV918871.1|AV918871 AV918871 K. Sato unpublished cDNA li... 52 5e-005
gb|AV919076.1|AV919076 AV919076 K. Sato unpublished cDNA li... 52 5e-005
gb|AV919156.1|AV919156 AV919156 K. Sato unpublished cDNA li... 52 5e-005
gb|AV919513.1|AV919513 AV919513 K. Sato unpublished cDNA li... 52 5e-005
gb|AV919679.1|AV919679 AV919679 K. Sato unpublished cDNA li... 52 5e-005
gb|AV921216.1|AV921216 AV921216 K. Sato unpublished cDNA li... 52 5e-005
gb|AV921718.1|AV921718 AV921718 K. Sato unpublished cDNA li... 52 5e-005
gb|BJ463352.1|BJ463352 BJ463352 K. Sato unpublished cDNA li... 52 5e-005
gb|BJ463970.1|BJ463970 BJ463970 K. Sato unpublished cDNA li... 52 5e-005
gb|BJ466237.1|BJ466237 BJ466237 K. Sato unpublished cDNA li... 52 5e-005
gb|BJ466302.1|BJ466302 BJ466302 K. Sato unpublished cDNA li... 52 5e-005
gb|BJ467706.1|BJ467706 BJ467706 K. Sato unpublished cDNA li... 52 5e-005
gb|BJ467865.1|BJ467865 BJ467865 K. Sato unpublished cDNA li... 52 5e-005
gb|BQ658243.1|BQ658243 HB09P05w BC Hordeum vulgare subsp. v... 52 5e-005
gb|BQ658402.1|BQ658402 HB09E05w BC Hordeum vulgare subsp. v... 52 5e-005
gb|BQ763954.1|BQ763954 EBro03_SQ005_J20_R root, 3 week, wat... 52 5e-005
gb|BQ767952.1|BQ767952 EBro08_SQ010_E07_R root, 3 week, dro... 52 5e-005
gb|BF261472.2|BF261472 HV_CEa0001G01f Hordeum vulgare seedl... 50 2e-004
gb|CD662339.1|CD662339 UCRHV18_01dc12_b1 Drought-stressed D... 50 2e-004
gb|AL505043.1|AL505043 AL505043 Hordeum vulgare Barke roots... 48 8e-004
gb|BI959520.1|BI959520 HVSMEn0020A11f Hordeum vulgare rachi... 46 0.003
gb|BI960675.1|BI960675 HVSMEn0025M06f Hordeum vulgare rachi... 46 0.003
gb|AV918957.1|AV918957 AV918957 K. Sato unpublished cDNA li... 46 0.003
gb|AV920629.1|AV920629 AV920629 K. Sato unpublished cDNA li... 46 0.003
gb|AJ462401.1|AJ462401 AJ462401 S00002 Hordeum vulgare subs... 44 0.013
gb|BM101485.2|BM101485 EBpi01_SQ003_P22_R pistil, 1 DPA, no... 44 0.013
gb|BI958511.1|BI958511 HVSMEn0015G01f Hordeum vulgare rachi... 42 0.051
gb|BI959986.1|BI959986 HVSMEn0022L24f Hordeum vulgare rachi... 42 0.051
gb|AV936421.1|AV936421 AV936421 K. Sato unpublished cDNA li... 42 0.051
gb|BF255229.2|BF255229 HVSMEf0006E21f Hordeum vulgare seedl... 40 0.20
gb|AV920933.1|AV920933 AV920933 K. Sato unpublished cDNA li... 40 0.20
gb|BG343364.1|BG343364 HVSMEg0005I18f Hordeum vulgare pre-a... 38 0.80
gb|AV918391.1|AV918391 AV918391 K. Sato unpublished cDNA li... 38 0.80
gb|CK124463.1|CK124463 BES1824109d17 BES1824 Hordeum vulgar... 38 0.80
gb|AL499822.1|AL499822 AL499822 Hordeum vulgare Barke etiol... 36 3.2
gb|AL503719.1|AL503719 AL503719 Hordeum vulgare Barke roots... 36 3.2
gb|BG416054.1|BG416054 HVSMEk0009J13f Hordeum vulgare testa... 36 3.2
gb|AV914111.1|AV914111 AV914111 K. Sato unpublished cDNA li... 36 3.2
gb|BJ464409.1|BJ464409 BJ464409 K. Sato unpublished cDNA li... 36 3.2
gb|BM377505.2|BM377505 EBem04_SQ003_F10_R embryo, 12 DPA, n... 36 3.2
gb|BQ762115.1|BQ762115 EBpi01_SQ005_H24_R pistil, 1 DPA, no... 36 3.2
gb|BQ764456.1|BQ764456 EBan01_SQ005_M20 _R anther, yellow s... 36 3.2
gb|CA017881.1|CA017881 HV06K06r HV Hordeum vulgare subsp. v... 36 3.2
gb|CA024332.1|CA024332 HZ49A08r HZ Hordeum vulgare subsp. v... 36 3.2
gb|CV063915.1|CV063915 BNEL94f12 Barley EST endosperm libra... 36 3.2
>gb|BF627578.2|BF627578 HVSMEb0005D17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005D17f, mRNA sequence
Length = 771
Score = 662 bits (334), Expect = 0.0
Identities = 544/614 (88%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||| ||||| ||||| ||||| |||
Sbjct: 628 tggtcgccgaatatccgcttgcggaagtcggtaaccataagggggaggccgtcacggagg 569
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | | |||| || ||||||||||||
Sbjct: 568 gcgatcttgggctcccacccaagttgctccttggctctggtgatatctggcttgcgcttg 509
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 508 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 449
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 448 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 389
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 388 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 329
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
||||||||||| ||||| ||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 328 aaactcctggtctgcttgccatcgccgtaaaccgtcaaaggctccttccttagcgcctga 269
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||||||||| |||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 268 gcaacaaagttgctgacaacacggccatcgtcaatgcacatgcgtgggccataggtgtta 209
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
||||| || || |||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 208 aagatccgagcaatcctaacctcaaggttggcaccacggtggtagtccatggtcaaggtt 149
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|||||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||
Sbjct: 148 tcagctgtacgcttgccctcgtcgtagcaactcctgacaccgatggggttgacattgccc 89
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtg 958
||||| ||||||||||| ||||||||||| |||||||| |||||||| || || ||||||
Sbjct: 88 cagtaggtctccacctgagggtgctggaggggatcaccgtagacctcgctagtgctggtg 29
Query: 959 aggaggaacctggc 972
||||||||| ||||
Sbjct: 28 aggaggaacttggc 15
>gb|BM816655.1|BM816655 HB01A07_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01A07_T3.ab1 similar to dTDP-glucose 4,6-dehydratase,,
mRNA sequence
Length = 859
Score = 658 bits (332), Expect = 0.0
Identities = 576/655 (87%), Gaps = 2/655 (0%)
Strand = Plus / Minus
Query: 375 gcttgcggaagtcggagaccatgaggggaaggccctcacgc-agggggatcttcggttcc 433
||||||||||||||| |||||||||||||||| ||||| |||| |||||| || |||
Sbjct: 722 gcttgcggaagtcggtacccatgaggggaaggccgtcacgggagggcgatcttgggctcc 663
Query: 434 cacccgaggaactcctt-ggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcctg 492
||||||| | |||||| ||| | |||| || ||||||||||||||||||||||||||
Sbjct: 662 cacccgaagtgctcctttggccttggtgatatctggcttgcgcttgtgcgggtcgtcctg 603
Query: 493 ggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggc 552
|||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 602 ggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcctggacaaccttggc 543
Query: 553 aagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcgcc 612
|| || |||||||||||||| || ||||| |||| |||||||||| | | || || ||
Sbjct: 542 cagttccagcatggtgaactcaccggggttgcccaagttgaatggcncaatgtgatcacc 483
Query: 613 ttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttg 672
|||||||||| |||||| |||||||||| ||||||||| ||||||||||||||||| ||
Sbjct: 482 ttccatcagcctcatcaacccctcaaccaaatcagaaacgtattggaaactcctggtctg 423
Query: 673 ctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttact 732
||| ||||| || ||||||||||| ||||||||||| || ||||||||||||||||| ||
Sbjct: 422 cttgccatcgccgtaaaccgtcaaaggctccttccttagcgcctgagcaacaaagttgct 363
Query: 733 gacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgat 792
|||||||||||||||||||||||||||||| |||||||| || || ||||| || || ||
Sbjct: 362 gacaacacggccatcgtcaatgcacatgcgcgggccataggtgttaaagatccgagcaat 303
Query: 793 cctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgctt 852
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 302 cctaacctcaaggttggcaccacggtggtagtccatggtcaaggtttcagctgtacgctt 243
Query: 853 gccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccac 912
|||||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 242 gccctcgtcgtagcaactcctgacaccgatggggttgacattgccccagtaggtctccac 183
Query: 913 ctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacctggc 972
||| ||||||||||| |||||||| |||||||| || || ||||||||||||||| ||||
Sbjct: 182 ctgagggtgctggaggggatcaccgtagacctcgctagtgctggtgaggaggaacttggc 123
Query: 973 gttgatcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||| || ||||| |||||||| || || ||||||||||||||||||
Sbjct: 122 accgatcctcttggccaatccaagcatgttgagtgtaccaaccacattggtcttg 68
>gb|BU972745.1|BU972745 HB22J12r BC Hordeum vulgare subsp. vulgare cDNA clone HB22J12
5-PRIME, mRNA sequence
Length = 619
Score = 644 bits (325), Expect = 0.0
Identities = 529/597 (88%)
Strand = Plus / Minus
Query: 431 tcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcc 490
||||||||||| ||||||||| | |||| || ||||||||||||||||||||||||
Sbjct: 616 tcccacccgagttgctccttggccttggtgatatctggcttgcgcttgtgcgggtcgtcc 557
Query: 491 tgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttg 550
|||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 556 tgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcctggacaaccttg 497
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcg 610
|| || || |||||||||||||| || ||||| |||| |||||||||||| | || ||
Sbjct: 496 gccagttccagcatggtgaactcaccggggttgcccaagttgaatggcccaatgtgatca 437
Query: 611 ccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtt 670
|||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||||
Sbjct: 436 ccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattggaaactcctggtc 377
Query: 671 tgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagtta 730
||||| ||||| || ||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 376 tgcttgccatcgccgtaaaccgtcaaaggctccttccttagcgcctgagcaacaaagttg 317
Query: 731 ctgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcg 790
|||||||||||||||||||||||||||||||| |||||||| || || ||||| || ||
Sbjct: 316 ctgacaacacggccatcgtcaatgcacatgcgcgggccataggtgttaaagatccgagca 257
Query: 791 atcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgc 850
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 256 atcctaacctcaaggttggcaccacggtggtagtccatggtcaaggtttcagctgtacgc 197
Query: 851 ttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctcc 910
|||||||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 196 ttgccctcgtcgtagcaactcctgacaccgatggggttgacattgccccagtaggtctcc 137
Query: 911 acctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacctg 970
||||| ||||||||||| |||||||| |||||||| || || ||||||||||||||| ||
Sbjct: 136 acctgagggtgctggaggggatcaccgtagacctcgctagtgctggtgaggaggaacttg 77
Query: 971 gcgttgatcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|| ||||||||| || ||||| |||||||| || || ||||||||||||||||||
Sbjct: 76 gcaccgatcctcttggccaatccaagcatgttgagtgtaccaaccacattggtcttg 20
>gb|BU996667.1|BU996667 HM14F14r HM Hordeum vulgare subsp. vulgare cDNA clone HM14F14
5-PRIME, mRNA sequence
Length = 604
Score = 613 bits (309), Expect = e-174
Identities = 493/553 (89%), Gaps = 1/553 (0%)
Strand = Plus / Minus
Query: 467 ggcttgcgcttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttgggg 526
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 569 ggcttgcgcttgtgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcggg 510
Query: 527 tcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttaccc 586
|||||||||||||||||||||||||| || || |||||||||||||| || ||||| |||
Sbjct: 509 tcgatggtgtcctggacaaccttggccagttccagcatggtgaactcaccggggttgccc 450
Query: 587 aggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatca 646
| |||||||||||| | || || |||||||||||| |||||| |||||||||| ||||
Sbjct: 449 aagttgaatggcccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatca 390
Query: 647 gaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttc 706
||||| ||||||||||||||||| ||||| ||||| || ||||||||||| |||||||||
Sbjct: 389 gaaacgtattggaaactcctggtctgcttgccatcgccgtaaaccgtcaaaggctccttc 330
Query: 707 ctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgaggg 766
|| || ||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 329 cttagcgcctgagcaacaaagttgctgacaacacggccatcgtcaatgcacatgcgcggg 270
Query: 767 ccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatcc 826
||||| || || ||||| || || |||||||||||||||||||||||||||||||| |||
Sbjct: 269 ccataggtgttaaagatccgagcaatcctaacctcaaggttggcaccacggtggtagtcc 210
Query: 827 atggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatggga 886
|||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 209 atggtcaaggtttcagctgtacgcttgccctcgtcgtagcaactcctgacaccgatgggg 150
Query: 887 ttgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctca 946
||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 149 ttgacattgccccagtaggtctccacctgagggtgctggaggggatcaccgtagacctcg 90
Query: 947 ctggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcaga 1006
|| || ||||||||||||||| |||| ||||||| | || ||||| |||||||| ||
Sbjct: 89 ctagtgctggtgaggaggaacttggcaccgatcctc-tggccaatccaagcatgttgagt 31
Query: 1007 gtcccaaccacat 1019
|| ||||||||||
Sbjct: 30 gtaccaaccacat 18
>gb|BJ544684.1|BJ544684 BJ544684 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34f15 5', mRNA sequence
Length = 540
Score = 605 bits (305), Expect = e-171
Identities = 452/501 (90%)
Strand = Plus / Minus
Query: 467 ggcttgcgcttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttgggg 526
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 503 ggcttgcgcttgtgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcggg 444
Query: 527 tcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttaccc 586
|||||||||||||||||||||||||| || || |||||||||||||| || ||||| |||
Sbjct: 443 tcgatggtgtcctggacaaccttggccagttccagcatggtgaactcaccggggttgccc 384
Query: 587 aggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatca 646
| |||||||||||| | || || |||||||||||| |||||| |||||||||| ||||
Sbjct: 383 aagttgaatggcccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatca 324
Query: 647 gaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttc 706
||||| ||||||||||||||||| ||||| ||||| || ||||||||||| |||||||||
Sbjct: 323 gaaacgtattggaaactcctggtctgcttgccatcgccgtaaaccgtcaaaggctccttc 264
Query: 707 ctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgaggg 766
|| || ||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 263 cttagcgcctgagcaacaaagttgctgacaacacggccatcgtcaatgcacatgcgtggg 204
Query: 767 ccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatcc 826
||||| || || ||||| || || |||||||||||||||||||||||||||||||| |||
Sbjct: 203 ccataggtgttaaagatccgagcaatcctaacctcaaggttggcaccacggtggtagtcc 144
Query: 827 atggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatggga 886
|||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 143 atggtcaaggtttcagctgtacgcttgccctcgtcgtagcaactcctgacaccgatgggg 84
Query: 887 ttgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctca 946
||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 83 ttgacattgccccagtaggtctccacctgagggtgctggaggggatcaccgtagacctcg 24
Query: 947 ctggtactggtgaggaggaac 967
|| || |||||||||||||||
Sbjct: 23 ctagtgctggtgaggaggaac 3
>gb|BM443008.2|BM443008 EBro02_SQ002_C21_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_C21 5', mRNA sequence
Length = 465
Score = 555 bits (280), Expect = e-156
Identities = 412/456 (90%)
Strand = Plus / Minus
Query: 467 ggcttgcgcttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttgggg 526
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 456 ggcttgcgcttgtgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcggg 397
Query: 527 tcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttaccc 586
|||||||||||||||||||||||||| || || |||||||||||||| || ||||| |||
Sbjct: 396 tcgatggtgtcctggacaaccttggccagttccagcatggtgaactcaccggggttgccc 337
Query: 587 aggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatca 646
| |||||||||||| | || || |||||||||||| |||||| |||||||||| ||||
Sbjct: 336 aagttgaatggcccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatca 277
Query: 647 gaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttc 706
||||| ||||||||||||||||| ||||| ||||| || ||||||||||| |||||||||
Sbjct: 276 gaaacgtattggaaactcctggtctgcttgccatcgccgtaaaccgtcaaaggctccttc 217
Query: 707 ctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgaggg 766
|| || ||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 216 cttagcgcctgagcaacaaagttgctgacaacacggccatcgtcaatgcacatgcgcggg 157
Query: 767 ccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatcc 826
||||| || || ||||| || || |||||||||||||||||||||||||||||||| |||
Sbjct: 156 ccataggtgttaaagatccgagcaatcctaacctcaaggttggcaccacggtggtagtcc 97
Query: 827 atggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatggga 886
|||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 96 atggtcaaggtttcagctgtacgcttgccctcgtcgtagcaactcctgacaccgatgggg 37
Query: 887 ttgacattgccccagtaagtctccacctgcgggtgc 922
||||||||||||||||| ||||||||||| ||||||
Sbjct: 36 ttgacattgccccagtaggtctccacctgagggtgc 1
>gb|AV914847.1|AV914847 AV914847 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8i09 5', mRNA sequence
Length = 519
Score = 527 bits (266), Expect = e-148
Identities = 418/470 (88%)
Strand = Plus / Minus
Query: 503 cggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagc 562
|||||||||||||| ||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 518 cggaactcgatccgcgcgttcgggtcgatggtgtcctggacaaccttggccagttccagc 459
Query: 563 atggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagc 622
||||||||||| || ||||| |||| |||||||||||| | || || ||||||||||||
Sbjct: 458 atggtgaactcaccggggttgcccaagttgaatggcccaatgtgatcaccttccatcagc 399
Query: 623 ttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatca 682
|||||| |||||||||| ||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 398 ctcatcaacccctcaaccaaatcagaaacgtattggaaactcctggtctgcttgccatcg 339
Query: 683 ccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacgg 742
|| ||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 338 ccgtaaaccgtcaaaggctccttccttagcgcctgagcaacaaagttgctgacaacacgg 279
Query: 743 ccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcctaacctca 802
|||||||||||||||||||| |||||||| || || ||||| || || ||||||||||||
Sbjct: 278 ccatcgtcaatgcacatgcgtgggccataggtgttaaagatccgagcaatcctaacctca 219
Query: 803 aggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcg 862
||||||||||||| | || ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 218 aggttggcaccacngnnntagtccatggtcaaggtttcagctgtacgcttgccctcgtcg 159
Query: 863 taacagctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgc 922
|| || ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 158 tagcaactcctgacaccgatggggttgacattgccccagtaggtctccacctgagggtgc 99
Query: 923 tggagaggatcaccatagacctcactggtactggtgaggaggaacctggc 972
||||| |||||||| |||||||| || || ||||||||||||||| ||||
Sbjct: 98 tggaggggatcaccgtagacctcgctagtgctggtgaggaggaacttggc 49
>gb|BQ471753.1|BQ471753 HV03F22r HV Hordeum vulgare subsp. vulgare cDNA clone HV03F22
5-PRIME, mRNA sequence
Length = 599
Score = 507 bits (256), Expect = e-142
Identities = 414/467 (88%)
Strand = Plus / Minus
Query: 561 gcatggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatca 620
||||||||||||| || ||||| | || |||||||||||| | || || ||||||||||
Sbjct: 599 gcatggtgaactcaccggggttgcncaagttgaatggcccaatgtgatcaccttccatca 540
Query: 621 gcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccat 680
|| |||||| |||||||||| ||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 539 gcctcatcaacccctcaaccaaatcagaaacgtattggaaactcctggtctgcttgccat 480
Query: 681 caccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacac 740
| || ||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 479 cgccgtaaaccgtcaaaggctccttccttagcgcctgagcaacaaagttgctgacaacac 420
Query: 741 ggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcctaacct 800
|||||||||||||||||||||| |||||||| || || ||||| || || ||||||||||
Sbjct: 419 ggccatcgtcaatgcacatgcgcgggccataggtgttaaagatccgagcaatcctaacct 360
Query: 801 caaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcat 860
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 359 caaggttggcaccacggtggtagtccatggtcaaggtttcagctgtacgcttgccctcgt 300
Query: 861 cgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggt 920
|||| || ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 299 cgtagcaactcctgacaccgatggggttgacattgccccagtaggtctccacctgagggt 240
Query: 921 gctggagaggatcaccatagacctcactggtactggtgaggaggaacctggcgttgatcc 980
||||||| |||||||| |||||||| || || ||||||||||||||| |||| |||||
Sbjct: 239 gctggaggggatcaccgtagacctcgctagtgctggtgaggaggaacttggcaccgatcc 180
Query: 981 tctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|||| || ||||| |||||||| || || ||||||||||||||||||
Sbjct: 179 tcttggccaatccaagcatgttgagtgtaccaaccacattggtcttg 133
>gb|BU969174.1|BU969174 HB10M08r BC Hordeum vulgare subsp. vulgare cDNA clone HB10M08
5-PRIME, mRNA sequence
Length = 584
Score = 498 bits (251), Expect = e-139
Identities = 415/469 (88%), Gaps = 1/469 (0%)
Strand = Plus / Minus
Query: 560 agcatggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatc 619
|||||||||||||| || ||||| |||| |||||||||| | | || || |||||||||
Sbjct: 584 agcatggtgaactcaccggggttgcccaagttgaatggcncaatgtgatcaccttccatc 525
Query: 620 agcttcatcag-accctcaaccagatcagaaacatattggaaactcctggtttgctttcc 678
||| |||||| |||||||||| ||||||||| ||||||||||||||||| ||||| ||
Sbjct: 524 agcctcatcaacnccctcaaccaaatcagaaacgtattggaaactcctggtctgcttgcc 465
Query: 679 atcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaac 738
||| || ||||||||||| ||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 464 atcgccgtaaaccgtcaaaggctccttccttagcgcctgagcaacaaagttgctgacaac 405
Query: 739 acggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcctaac 798
|||||||||||||||||||||||| |||||||| || || ||||| || || ||||||||
Sbjct: 404 acggccatcgtcaatgcacatgcgcgggccataggtgttaaagatccgagcaatcctaac 345
Query: 799 ctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctc 858
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 344 ctcaaggttggcaccacggtggtagtccatggtcaaggtttcagctgtacgcttgccctc 285
Query: 859 atcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgg 918
||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 284 gtcgtagcaactcctgacaccgatggggttgacattgccccagtaggtctccacctgagg 225
Query: 919 gtgctggagaggatcaccatagacctcactggtactggtgaggaggaacctggcgttgat 978
||||||||| |||||||| |||||||| || || ||||||||||||||| |||| |||
Sbjct: 224 gtgctggaggggatcaccgtagacctcgctagtgctggtgaggaggaacttggcaccgat 165
Query: 979 cctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|||||| || ||||| |||||||| || || ||||||||||||||||||
Sbjct: 164 cctcttggccaatccaagcatgttgagtgtaccaaccacattggtcttg 116
>gb|AV914112.1|AV914112 AV914112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m11 5', mRNA sequence
Length = 623
Score = 496 bits (250), Expect = e-138
Identities = 400/450 (88%)
Strand = Plus / Minus
Query: 578 gggttacccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctca 637
||||| |||| |||||||||||| | || || |||||||||||| |||||| ||||||
Sbjct: 623 gggttgcccaagttgaatggcccaatgtgatcaccttccatcagcctcatcaacccctca 564
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||| ||||||||| ||||||||||||||||| ||||| ||||| || |||||||||||
Sbjct: 563 accaaatcagaaacgtattggaaactcctggtctgcttgccatcgccgtaaaccgtcaaa 504
Query: 698 ggctccttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcac 757
||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 503 ggctccttccttagcgcctgagcaacaaagttgctgacaacacggccatcgtcaatgcac 444
Query: 758 atgcgagggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacgg 817
||||| |||||||| || || ||||| || || |||||||||||||||||||||||||||
Sbjct: 443 atgcgtgggccataggtgttaaagatccgagcaatcctaacctcaaggttggcaccacgg 384
Query: 818 tggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgaca 877
||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 383 tggtagtccatggtcaaggtttcagctgtacgcttgccctcgtcgtagcaactcctgaca 324
Query: 878 ccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacca 937
|||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 323 ccgatggggttgacattgccccagtaggtctccacctgagggtgctggaggggatcaccg 264
Query: 938 tagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagc 997
|||||||| || || ||||||||||||||| |||| ||||||||| || ||||| |||
Sbjct: 263 tagacctcgctagtgctggtgaggaggaacttggcaccgatcctcttggccaatccaagc 204
Query: 998 atgttcagagtcccaaccacattggtcttg 1027
||||| || || ||||||||||||||||||
Sbjct: 203 atgttgagtgtaccaaccacattggtcttg 174
>gb|CA002810.1|CA002810 HS08J14r HS Hordeum vulgare subsp. vulgare cDNA clone HS08J14
5-PRIME, mRNA sequence
Length = 466
Score = 492 bits (248), Expect = e-137
Identities = 404/456 (88%)
Strand = Plus / Minus
Query: 421 gatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtg 480
|||||| || ||||||||||| ||||||||| | |||| || ||||||||||||||
Sbjct: 466 gatcttgggctcccacccgagttgctccttggccttggtgatatctggcttgcgcttgtg 407
Query: 481 cgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctg 540
|||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 406 cgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcctg 347
Query: 541 gacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccc 600
|||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||||
Sbjct: 346 gacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggccc 287
Query: 601 cacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaa 660
| || || |||||||||||| |||||| |||||||||| ||||||||| ||||||||
Sbjct: 286 aatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattggaa 227
Query: 661 actcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagc 720
||||||||| ||||| ||||| || ||||||||||| ||||||||||| || ||||||||
Sbjct: 226 actcctggtctgcttgccatcgccgtaaaccgtcaaaggctccttccttagcgcctgagc 167
Query: 721 aacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaa 780
||||||||| |||||||||||||||||||||||||||||||| |||||||| || || ||
Sbjct: 166 aacaaagttgctgacaacacggccatcgtcaatgcacatgcgcgggccataggtgttaaa 107
Query: 781 gatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttc 840
||| || || |||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 106 gatccgagcaatcctaacctcaaggttggcaccacggtggtagtccatggtcaaggtttc 47
Query: 841 agctgtacgcttgccctcatcgtaacagctcctgac 876
|||||||||||||||||| ||||| || ||||||||
Sbjct: 46 agctgtacgcttgccctcgtcgtagcaactcctgac 11
>gb|AV915891.1|AV915891 AV915891 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16h19 5', mRNA sequence
Length = 661
Score = 486 bits (245), Expect = e-135
Identities = 374/417 (89%)
Strand = Plus / Minus
Query: 611 ccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtt 670
|||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||||
Sbjct: 643 ccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattggaaactcctggtc 584
Query: 671 tgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagtta 730
||||| ||||| || ||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 583 tgcttgccatcgccgtaaaccgtcaaaggctccttccttagcgcctgagcaacaaagttg 524
Query: 731 ctgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcg 790
|||||||||||||||||||||||||||||||| |||||||| || || ||||| || ||
Sbjct: 523 ctgacaacacggccatcgtcaatgcacatgcgtgggccataggtgttaaagatccgagca 464
Query: 791 atcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgc 850
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 463 atcctaacctcaaggttggcaccacggtggtagtccatggtcaaggtttcagctgtacgc 404
Query: 851 ttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctcc 910
|||||||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 403 ttgccctcgtcgtagcaactcctgacaccgatggggttgacattgccccagtaggtctcc 344
Query: 911 acctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacctg 970
||||| ||||||||||| |||||||| |||||||| || || ||||||||||||||| ||
Sbjct: 343 acctgagggtgctggaggggatcaccgtagacctcgctagtgctggtgaggaggaacttg 284
Query: 971 gcgttgatcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|| ||||||||| || ||||| |||||||| || || ||||||||||||||||||
Sbjct: 283 gcaccgatcctcttggccaatccaagcatgttgagtgtaccaaccacattggtcttg 227
>gb|BU988947.1|BU988947 HF19D20r HF Hordeum vulgare subsp. vulgare cDNA clone HF19D20
5-PRIME, mRNA sequence
Length = 492
Score = 486 bits (245), Expect = e-135
Identities = 374/417 (89%)
Strand = Plus / Minus
Query: 611 ccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtt 670
|||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||||
Sbjct: 481 ccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattggaaactcctggtc 422
Query: 671 tgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagtta 730
||||| ||||| || ||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 421 tgcttgccatcgccgtaaaccgtcaaaggctccttccttagcgcctgagcaacaaagttg 362
Query: 731 ctgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcg 790
|||||||||||||||||||||||||||||||| |||||||| || || ||||| || ||
Sbjct: 361 ctgacaacacggccatcgtcaatgcacatgcgcgggccataggtgttaaagatccgagca 302
Query: 791 atcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgc 850
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 301 atcctaacctcaaggttggcaccacggtggtagtccatggtcaaggtttcagctgtacgc 242
Query: 851 ttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctcc 910
|||||||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 241 ttgccctcgtcgtagcaactcctgacaccgatggggttgacattgccccagtaggtctcc 182
Query: 911 acctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacctg 970
||||| ||||||||||| |||||||| |||||||| || || ||||||||||||||| ||
Sbjct: 181 acctgagggtgctggaggggatcaccgtagacctcgctagtgctggtgaggaggaacttg 122
Query: 971 gcgttgatcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|| ||||||||| || ||||| |||||||| || || ||||||||||||||||||
Sbjct: 121 gcaccgatcctcttggccaatccaagcatgttgagtgtaccaaccacattggtcttg 65
>gb|AV921006.1|AV921006 AV921006 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16h19 3', mRNA sequence
Length = 705
Score = 458 bits (231), Expect = e-127
Identities = 405/464 (87%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 238 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 297
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 298 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 357
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 358 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 417
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 418 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 477
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 478 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 537
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
||||||||||| ||||| ||||| || ||||||||||| |||| |||||| || ||||||
Sbjct: 538 aaactcctggtctgcttgccatcgccgtaaaccgtcaaaggctncttccttagcgcctga 597
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||||||||| |||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 598 gcaacaaagttgctgacaacacggccatcgtcaatgcacatgcgtgggccataggtgtta 657
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggta 822
||||| || || ||||||||||||| ||||||||||| ||||||
Sbjct: 658 aagatccgagcaatcctaacctcaangttggcaccacngtggta 701
>gb|AV919157.1|AV919157 AV919157 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m11 3', mRNA sequence
Length = 678
Score = 422 bits (213), Expect = e-116
Identities = 363/413 (87%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 237 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 296
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 297 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 356
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 357 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 416
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 417 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 476
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 477 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 536
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
||||||||||| ||||| ||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 537 aaactcctggtctgcttgccatcgccgtaaaccgtcaaaggctccttccttagcgcctga 596
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccata 771
||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 597 gcaacaaagttgctgacaacacggccatcgtcaatgcacatgcgtgggccata 649
>gb|BJ549498.1|BJ549498 BJ549498 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36d06 5', mRNA sequence
Length = 523
Score = 418 bits (211), Expect = e-115
Identities = 325/363 (89%)
Strand = Plus / Minus
Query: 665 ctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaaca 724
||||| ||||| ||||| || ||||||||||| ||||||||||| || ||||||||||||
Sbjct: 523 ctggtctgcttgccatcgccgtaaaccgtcaaaggctccttccttagcgcctgagcaaca 464
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagata 784
||||| |||||||||||||||||||||||||||||||| |||||||| || || |||||
Sbjct: 463 aagttgctgacaacacggccatcgtcaatgcacatgcgtgggccataggtgttaaagatc 404
Query: 785 cgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagct 844
|| || |||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 403 cgagcaatcctaacctcaaggttggcaccacggtggtagtccatggtcaaggtttcagct 344
Query: 845 gtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaa 904
|||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||
Sbjct: 343 gtacgcttgccctcgtcgtagcaactcctgacaccgatggggttgacattgccccagtag 284
Query: 905 gtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggagg 964
||||||||||| ||||||||||| |||||||| |||||||| || || ||||||||||||
Sbjct: 283 gtctccacctgagggtgctggaggggatcaccgtagacctcgctagtgctggtgaggagg 224
Query: 965 aacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaaccacattggtc 1024
||| |||| ||||||||| || ||||| |||||||| || || |||||||||||||||
Sbjct: 223 aacttggcaccgatcctcttggccaatccaagcatgttgagtgtaccaaccacattggtc 164
Query: 1025 ttg 1027
|||
Sbjct: 163 ttg 161
>gb|BF258204.2|BF258204 HVSMEf0015B12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015B12f, mRNA sequence
Length = 749
Score = 412 bits (208), Expect = e-113
Identities = 355/404 (87%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 404 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 345
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 344 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 285
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 284 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 225
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 224 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 165
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 164 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 105
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
||||||||||| ||||| ||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 104 aaactcctggtctgcttgccatcgccgtaaaccgtcaaaggctccttccttagcgcctga 45
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcg 762
||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 44 gcaacaaagttgctgacaacacggccatcgtcaatgcacatgcg 1
>gb|BJ547041.1|BJ547041 BJ547041 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37k14 5', mRNA sequence
Length = 565
Score = 379 bits (191), Expect = e-103
Identities = 284/315 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatat 772
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 564 gcctgagcaacaaagttgctgacaacacggccatcgtcaatgcacatgcgtgggccatag 505
Query: 773 gtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtc 832
|| || ||||| || || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 504 gtgttaaagatccgagcaatcctaacctcaaggttggcaccacggtggtagtccatggtc 445
Query: 833 aacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgaca 892
|| ||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||
Sbjct: 444 aaggtttcagctgtacgcttgccctcgtcgtagcaactcctgacaccgatggggttgaca 385
Query: 893 ttgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggta 952
||||||||||| ||||||||||| ||||||||||| |||||||| |||||||| || ||
Sbjct: 384 ttgccccagtaggtctccacctgagggtgctggaggggatcaccgtagacctcgctagtg 325
Query: 953 ctggtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtccca 1012
||||||||||||||| |||| ||||||||| || ||||| |||||||| || || |||
Sbjct: 324 ctggtgaggaggaacttggcaccgatcctcttggccaatccaagcatgttgagtgtacca 265
Query: 1013 accacattggtcttg 1027
|||||||||||||||
Sbjct: 264 accacattggtcttg 250
>gb|BG301258.2|BG301258 HVSMEb0020E14f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0020E14f, mRNA sequence
Length = 900
Score = 357 bits (180), Expect = 7e-097
Identities = 421/500 (84%), Gaps = 1/500 (0%)
Strand = Plus / Minus
Query: 467 ggcttgcgcttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttgggg 526
||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||
Sbjct: 696 ggcttgcgcttgtccgggtcgtcgacggtgttggcccggaactcgatcc-tgcgttgggg 638
Query: 527 tcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttaccc 586
|||||||||||||| || || ||||| ||||| ||||| |||||||| || ||||| |||
Sbjct: 637 tcgatggtgtcctgcaccactttggccagctccagcatcgtgaactccccggggttcccc 578
Query: 587 aggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatca 646
|| ||||| |||||||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 577 agtttgaacggccccacgtgctccccctccatcagcttcatcagcccctcaaccagatcg 518
Query: 647 gaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttc 706
|| || || ||||| ||| | || ||||| | || || || ||||||| ||||||||||
Sbjct: 517 gagacgtactggaagctcatcgtctgcttgcggtcgccgtacaccgtcaggggctccttc 458
Query: 707 ctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgaggg 766
||||||||||| || |||||||| ||||| || ||||||||||| ||||||||||| ||
Sbjct: 457 ctcagtgcctgggcgacaaagttgctgacgacccggccatcgtcgatgcacatgcgcggc 398
Query: 767 ccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatcc 826
|| || || |||||||| || |||||||| ||||| |||||||| || |||||||| |||
Sbjct: 397 ccgtaggtgttgaagatccgcgcgatcctcacctcgaggttggcgccgcggtggtagtcc 338
Query: 827 atggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatggga 886
||||||| ||||| || || | ||| ||||| ||||| ||||||| |||||||||||
Sbjct: 337 atggtcagtgtttccgccgtcctctttccctcgtcgtagcagctccgaacaccgatgggg 278
Query: 887 ttgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctca 946
||||| ||||||||||| ||||| ||||| ||||||||||| || || || ||||||||
Sbjct: 277 ttgacgttgccccagtaggtctcgacctgggggtgctggagtgggtcgccgtagacctcg 218
Query: 947 ctggtactggtgaggaggaa 966
||||| ||||||||||||||
Sbjct: 217 ctggtgctggtgaggaggaa 198
>gb|BJ548879.1|BJ548879 BJ548879 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37k14 3', mRNA sequence
Length = 618
Score = 357 bits (180), Expect = 7e-097
Identities = 334/384 (86%), Gaps = 1/384 (0%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 235 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 294
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 295 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 354
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 355 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 414
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 415 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 474
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 475 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 534
Query: 659 aaactcctggtttgctttccatcaccat-aaaccgtcaagggctccttcctcagtgcctg 717
||||||||||| ||||| ||||| || | |||||||||| ||||||||||| || |||||
Sbjct: 535 aaactcctggtctgcttgccatcgccgtaaaaccgtcaaaggctccttccttagcgcctg 594
Query: 718 agcaacaaagttactgacaacacg 741
|||||||||||| |||||||||||
Sbjct: 595 agcaacaaagttgctgacaacacg 618
>gb|BF253522.3|BF253522 HVSMEf0001C17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001C17f, mRNA sequence
Length = 850
Score = 355 bits (179), Expect = 3e-096
Identities = 323/371 (87%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 372 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 313
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 312 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 253
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 252 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 193
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 192 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 133
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 132 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 73
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
||||||||||| ||||| ||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 72 aaactcctggtctgcttgccatcgccgtaaaccgtcaaaggctccttccttagcgcctga 13
Query: 719 gcaacaaagtt 729
|||||||||||
Sbjct: 12 gcaacaaagtt 2
>gb|BE519855.1|BE519855 HV_CEb0021H15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021H15f, mRNA sequence
Length = 715
Score = 333 bits (168), Expect = 1e-089
Identities = 368/435 (84%)
Strand = Plus / Minus
Query: 532 ggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggtt 591
||||||||| || |||||||| ||||| ||||| |||||||| | ||||| ||||||||
Sbjct: 715 ggtgtcctgcaccaccttggccagctccagcatcgtgaactccnccgggttccccaggtt 656
Query: 592 gaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaac 651
||| |||||||| ||||| || ||||||||||||||||| |||||||||||||| || ||
Sbjct: 655 gaacggccccacgtgctccccctccatcagcttcatcagcccctcaaccagatcggagac 596
Query: 652 atattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcag 711
|| ||||| ||||| || ||||| || || || || ||||||| |||||||||||||||
Sbjct: 595 gtactggaagctcctcgtctgcttgccgtcgccgtacaccgtcaggggctccttcctcag 536
Query: 712 tgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccata 771
|||||| || |||||||| ||||| || ||||||||||| ||||||||||| || || ||
Sbjct: 535 tgcctgggcgacaaagttgctgacgacccggccatcgtcgatgcacatgcgcggcccgta 476
Query: 772 tgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggt 831
|| |||||||| || |||||||| ||||| |||||||| || |||||||| ||||||||
Sbjct: 475 ggtgttgaagatccgcgcgatcctcacctcgaggttggcgccgcggtggtagtccatggt 416
Query: 832 caacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgac 891
|| ||||| || || | ||| ||||| ||||| ||||||| ||||||||||| |||||
Sbjct: 415 cagtgtttccgccgtcctctttccctcgtcgtagcagctccgaacaccgatggggttgac 356
Query: 892 attgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggt 951
||||||||||| ||||| ||||| ||||||||||| || || || |||||||| |||||
Sbjct: 355 gttgccccagtaggtctcgacctgggggtgctggagtgggtcgccgtagacctcgctggt 296
Query: 952 actggtgaggaggaa 966
||||||||||||||
Sbjct: 295 gctggtgaggaggaa 281
>gb|BJ546337.1|BJ546337 BJ546337 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak39a18 3', mRNA sequence
Length = 514
Score = 329 bits (166), Expect = 2e-088
Identities = 304/350 (86%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 163 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 222
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 223 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 282
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 283 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 342
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 343 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 402
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 403 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 462
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcct 708
||||||||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 463 aaactcctggtctgcttgccatcgccgtaaaccgtcaaaggctccttcct 512
>gb|BU970828.1|BU970828 HB15M21r BC Hordeum vulgare subsp. vulgare cDNA clone HB15M21
5-PRIME, mRNA sequence
Length = 492
Score = 327 bits (165), Expect = 6e-088
Identities = 300/345 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 354 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 295
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || ||||||||||| ||||||||| | |||| || ||||||||||||
Sbjct: 294 gcgatcttgggctcccacccgagttgctccttggccttggtgatatctggcttgcgcttg 235
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 234 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 175
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 174 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 115
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 114 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 55
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||||| ||||| ||||| || ||||||||||| ||||||
Sbjct: 54 aaactcctggtctgcttgccatcgccgtaaaccgtcaaaggctcc 10
>gb|BI958920.1|BI958920 HVSMEn0017D23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017D23f, mRNA sequence
Length = 648
Score = 321 bits (162), Expect = 4e-086
Identities = 303/350 (86%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 293 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 352
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 353 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 412
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 413 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 472
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 473 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 532
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 533 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 592
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcct 708
||||||||||| ||||| ||||| || ||||||||||| ||||||||||
Sbjct: 593 aaactcctggtctgcttgccatcgccctaaaccgtcaaaagctccttcct 642
>gb|BJ449493.1|BJ449493 BJ449493 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25e05 5', mRNA sequence
Length = 398
Score = 319 bits (161), Expect = 1e-085
Identities = 332/389 (85%)
Strand = Plus / Minus
Query: 431 tcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcc 490
||||||||||| | ||||||||| | ||||||| |||||||||||||||||||||||
Sbjct: 389 tcccacccgagcagctccttggccttggtgatgtccggcttgcgcttgtgcgggtcgtcg 330
Query: 491 tgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttg 550
|||||| ||||||||||||| |||||||||||||||||||||||| || ||||||
Sbjct: 329 gcggtgttggcccggaactcgatccttgcgttggggtcgatggtgtcctgcaccaccttg 270
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcg 610
|| ||||| ||||| |||||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 269 gccagctccagcatcgtgaactcccccgggttccccaggttgaacggccccacgtgctcc 210
Query: 611 ccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtt 670
|| ||||||||||||||||| |||||||||||||| || || || ||||| ||||| ||
Sbjct: 209 ccctccatcagcttcatcagcccctcaaccagatcggagacgtactggaagctcctcgtc 150
Query: 671 tgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagtta 730
||||| || || || || ||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 149 tgcttgccgtcgccgtacaccgtcaggggctccttcctcagtgcctgggcgacaaagttg 90
Query: 731 ctgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcg 790
||||| || ||||||||||| ||||||||||| || || || || |||||||| || |||
Sbjct: 89 ctgacgacccggccatcgtcgatgcacatgcgcggcccgtaggtgttgaagatccgcgcg 30
Query: 791 atcctaacctcaaggttggcaccacggtg 819
||||| ||||| |||||||| ||||||||
Sbjct: 29 atcctcacctcgaggttggcgccacggtg 1
>gb|BF256948.2|BF256948 HVSMEf0011H06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011H06f, mRNA sequence
Length = 538
Score = 301 bits (152), Expect = 3e-080
Identities = 341/404 (84%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| |||||||||| ||||| ||||| |||
Sbjct: 404 tggtcgccgaatatccgcttgcggaagtcggtatccatgagggggaggccgtcacggagg 345
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || |||| || | | |||| || |||||||| |||
Sbjct: 344 gcgatcttgggctcccacccaagttgctccatgtccttggtgatatctggcttgcgattg 285
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| ||||||||||||||||||| |||||||||||| | ||||| |||||||||||||||
Sbjct: 284 tgagggtcgtcctgggtgttctcacggaactcgatcagcgcgttcgggtcgatggtgtcc 225
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| ||||||||| | || || |||||||||||||| || |||| |||| ||||||||||
Sbjct: 224 tgcacaaccttgtccagttccagcatggtgaactctccggggtagcccaagttgaatggc 165
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
| | || || | ||||||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 164 tcaatgtgatcacattccatcagcttcatcaacccctcaaccaaatcagaaacgtattgg 105
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
||||||||||| |||| ||||||| |||||||||| ||||||||||| || ||||||
Sbjct: 104 aaactcctggtctgctagccatcacagtaaaccgtcataggctccttccttagcgcctga 45
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcg 762
||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 44 gcaacaaagttgatgacaactcggccatcgtcaatgcacatgcg 1
>gb|BQ757608.1|BQ757608 EBem10_SQ004_K13_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ004_K13 5', mRNA sequence
Length = 479
Score = 299 bits (151), Expect = 1e-079
Identities = 280/323 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 325 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 266
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || ||||||||||| ||||||||| | |||| || ||||||||||||
Sbjct: 265 gcgatcttgggctcccacccgagttgctccttggccttggtgatatctggcttgcgcttg 206
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 205 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 146
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 145 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 86
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||| ||||| ||||||
Sbjct: 85 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcggaaacgtattgg 26
Query: 659 aaactcctggtttgctttccatc 681
||||||||||| ||||| |||||
Sbjct: 25 aaactcctggtctgcttgccatc 3
>gb|AL510717.1|AL510717 AL510717 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05M18u 3',
mRNA sequence
Length = 580
Score = 297 bits (150), Expect = 5e-079
Identities = 289/334 (86%), Gaps = 1/334 (0%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 225 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 284
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || ||||||||||| ||||||||| | |||| || ||||||||||||
Sbjct: 285 gcgatcttgggctcccacccgagttgctccttggccttggtgatatctggcttgcgcttg 344
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 345 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 404
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 405 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 464
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatc-agaaacatattg 657
|| | || || |||||||||||| |||||| |||||||||| ||| |||||| |||||
Sbjct: 465 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcaagaaacgtattg 524
Query: 658 gaaactcctggtttgctttccatcaccataaacc 691
|||||||||||| ||||| ||||| || ||||||
Sbjct: 525 gaaactcctggtctgcttgccatcgccgtaaacc 558
>gb|BJ546155.1|BJ546155 BJ546155 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34f15 3', mRNA sequence
Length = 555
Score = 295 bits (149), Expect = 2e-078
Identities = 275/317 (86%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 237 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 296
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 297 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 356
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 357 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 416
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 417 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 476
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 477 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 536
Query: 659 aaactcctggtttgctt 675
||||||||||| |||||
Sbjct: 537 aaactcctggtctgctt 553
>gb|CV062330.1|CV062330 BNEL78h1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL78h1 5' similar to UDP-glucuronic
acid decarboxylase, mRNA sequence
Length = 563
Score = 295 bits (149), Expect = 2e-078
Identities = 275/317 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 320 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 261
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || ||||||||||| |||||| || | |||| || ||||||||||||
Sbjct: 260 gcgatcttgggctcccacccgagttgctcctttgccttggtgatatctggcttgcgcttg 201
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 200 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 141
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 140 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 81
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 80 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 21
Query: 659 aaactcctggtttgctt 675
||||||||||| |||||
Sbjct: 20 aaactcctggtctgctt 4
>gb|CV063225.1|CV063225 BNEL88a10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL88a10 5' similar to dTDP-glucose
4-6-dehydratase-like protein, mRNA sequence
Length = 622
Score = 295 bits (149), Expect = 2e-078
Identities = 275/317 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 320 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 261
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || ||||||||||| |||||| || | |||| || ||||||||||||
Sbjct: 260 gcgatcttgggctcccacccgagttgctcctttgccttggtgatatctggcttgcgcttg 201
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 200 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 141
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 140 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 81
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 80 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 21
Query: 659 aaactcctggtttgctt 675
||||||||||| |||||
Sbjct: 20 aaactcctggtctgctt 4
>gb|AV911559.1|AV911559 AV911559 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak13i23 3', mRNA sequence
Length = 551
Score = 291 bits (147), Expect = 3e-077
Identities = 270/311 (86%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 237 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 296
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 297 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 356
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 357 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 416
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 417 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 476
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | || || |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 477 ccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaatcagaaacgtattgg 536
Query: 659 aaactcctggt 669
|||||||||||
Sbjct: 537 aaactcctggt 547
>gb|BI960078.1|BI960078 HVSMEn0023C04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023C04f, mRNA sequence
Length = 617
Score = 283 bits (143), Expect = 8e-075
Identities = 356/426 (83%), Gaps = 1/426 (0%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| |||||||||| ||||||||| || ||||| | || ||
Sbjct: 430 tggtcgccgaagatgcgggtgcggaagtcntggaccatgagcgggaggccgttccggagc 371
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| | ||| || ||||||||||| | ||||||||| | ||||||| ||||||||||||
Sbjct: 370 gccaccttgggctcccacccgagcagctccttggccttggtgatgtccggcttgcgcttg 311
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 310 tgcgggtcgtcggcggtgttggcccggaactcgatccttgcgttggggtcgatggtgtcc 251
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||| ||||| ||||| |||||||| || ||||| ||||||||||| |||
Sbjct: 250 tgcaccaccttggccagctccagcatcgtgaactcccccgggttccccaggttgaacggc 191
Query: 599 cccacatgctcgccttccatcagctt-catcagaccctcaaccagatcagaaacatattg 657
||||| ||||| || ||||||||||| |||||| |||||||||||||| || || || ||
Sbjct: 190 cccacgtgctccccctccatcagcttncatcagcccctcaaccagatcggagacgtactg 131
Query: 658 gaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctg 717
||| ||||| || ||||| || || || || ||||||| |||||||||||||||||||||
Sbjct: 130 gaagctcctcgtctgcttgccgtcgccgtacaccgtcaggggctccttcctcagtgcctg 71
Query: 718 agcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtatt 777
|| |||||||| ||||| || ||||||||||| ||||||||||| || || || || ||
Sbjct: 70 ggcgacaaagttgctgacgacccggccatcgtcgatgcacatgcgcggcccgtaggtgtt 11
Query: 778 gaagat 783
||||||
Sbjct: 10 gaagat 5
>gb|BM442828.2|BM442828 EBro02_SQ001_H02_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_H02 5', mRNA sequence
Length = 574
Score = 281 bits (142), Expect = 3e-074
Identities = 307/362 (84%)
Strand = Plus / Minus
Query: 605 tgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactc 664
||||| || ||||||||||||||||| |||||||||||||| || || || ||||| |||
Sbjct: 570 tgctccccctccatcagcttcatcagcccctcaaccagatcggagacgtactggaagctc 511
Query: 665 ctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaaca 724
|| || ||||| || || || || ||||||| ||||||||||||||||||||| || |||
Sbjct: 510 ctcgtctgcttgccgtcgccgtacaccgtcaggggctccttcctcagtgcctgggcgaca 451
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagata 784
||||| ||||| || ||||||||||| ||||||||||| || || || || ||||||||
Sbjct: 450 aagttgctgacgacccggccatcgtcgatgcacatgcgcggcccgtaggtgttgaagatc 391
Query: 785 cgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagct 844
|| |||||||| ||||| |||||||| || |||||||| |||||||||| ||||| ||
Sbjct: 390 cgcgcgatcctcacctcgaggttggcgccgcggtggtagtccatggtcagtgtttccgcc 331
Query: 845 gtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaa 904
|| | ||||||||| ||||| ||||||| ||||||||||| ||||| |||||||||||
Sbjct: 330 gtcctcttgccctcgtcgtagcagctccgaacaccgatggggttgacgttgccccagtag 271
Query: 905 gtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggagg 964
||||| ||||| ||||||||||| || || || |||||||| ||||| ||||||||||||
Sbjct: 270 gtctcgacctgggggtgctggagtgggtcgccgtagacctcgctggtgctggtgaggagg 211
Query: 965 aa 966
||
Sbjct: 210 aa 209
>gb|BQ756196.1|BQ756196 EBem05_SQ004_C06_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ004_C06 5', mRNA sequence
Length = 251
Score = 266 bits (134), Expect = 2e-069
Identities = 222/250 (88%), Gaps = 1/250 (0%)
Strand = Plus / Minus
Query: 643 atcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctc 702
||||||||| ||||||||||||||||| |||| ||||| || ||||||||||| |||||
Sbjct: 250 atcagaaacgtattggaaactcctggtgtgctagccatcgccgtaaaccgtcaaaggctc 191
Query: 703 cttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcg 762
|||| | || ||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 190 cttctttagcgcctgagcagcaaagttgatgacaacacggccatcgtcaatgcacatgcg 131
Query: 763 agggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggta 822
|||||||| || || ||||| || || |||||||| |||||||||||||||||||||||
Sbjct: 130 cgggccataggtgttaaagatccgagcaatcctaacgtcaaggttggcaccacggtggta 71
Query: 823 atccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacacc-ga 881
| |||||||||| ||||||||||||||||||||||| ||||| || ||||||||||| ||
Sbjct: 70 agccatggtcaaggtttcagctgtacgcttgccctcgtcgtagcaactcctgacaccaga 11
Query: 882 tgggattgac 891
|||| |||||
Sbjct: 10 tggggttgac 1
>gb|BG416704.2|BG416704 HVSMEk0014D01f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014D01f, mRNA sequence
Length = 692
Score = 262 bits (132), Expect = 3e-068
Identities = 366/444 (82%)
Strand = Plus / Minus
Query: 523 ggggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtt 582
|||||||||||||||||| | |||||||| || || ||||| ||||||| | |||||
Sbjct: 570 ggggtcgatggtgtcctgcgccaccttggccagttcgagcatcctgaactccaccgggtt 511
Query: 583 acccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccag 642
||||||||||| |||||||| ||||| || |||||||| |||||||| |||||||||||
Sbjct: 510 ccccaggttgaacggccccacgtgctccccctccatcaggttcatcagcccctcaaccag 451
Query: 643 atcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctc 702
||| || || || ||||| ||||| || ||||| | ||||| || ||||||| || ||
Sbjct: 450 atcggagacgtactggaagctcctagtgtgcttgcagtcaccgtacaccgtcagtgggtc 391
Query: 703 cttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcg 762
||||||||||||||| || ||| |||| ||||| || ||||||| ||| |||||||||||
Sbjct: 390 cttcctcagtgcctgggcgacacagttgctgacgacccggccatagtcgatgcacatgcg 331
Query: 763 agggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggta 822
|| || || || |||||||| || |||||||| |||| |||||||| || ||||||||
Sbjct: 330 cggcccgtaggtgttgaagatccgcgcgatcctcacctagaggttggcgccgcggtggta 271
Query: 823 atccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgat 882
|||||||||| ||||| || || | ||| ||||| | ||| ||||||| ||||||||
Sbjct: 270 gtccatggtcagtgtttccgccgtcctctttccctcgttgtagcagctccgaacaccgat 211
Query: 883 gggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagac 942
||| |||| ||||||||||| ||||| ||||| ||||||||||| || || || |||||
Sbjct: 210 ggggttgaagttgccccagtaggtctcgacctgggggtgctggagtgggtcgccgtagac 151
Query: 943 ctcactggtactggtgaggaggaa 966
||| ||||| ||||||||||||||
Sbjct: 150 ctcgctggtgctggtgaggaggaa 127
>gb|BI954503.1|BI954503 HVSMEm0018E24f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0018E24f, mRNA sequence
Length = 678
Score = 260 bits (131), Expect = 1e-067
Identities = 202/226 (89%)
Strand = Plus / Minus
Query: 802 aaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatc 861
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 635 aaggttggcaccacggtggtagtccatggtcaaggtttcagctgtacgcttgccctcgtc 576
Query: 862 gtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtg 921
||| || ||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 575 gtagcaactcctgacaccgatggggttgacattgccncagtaggtctccacctgagggtg 516
Query: 922 ctggagaggatcaccatagacctcactggtactggtgaggaggaacctggcgttgatcct 981
|||||| |||||||| |||||||| || || ||||||||||||||| |||| ||||||
Sbjct: 515 ctggaggggatcaccgtagacctcgctagtgctggtgaggaggaacttggcaccgatcct 456
Query: 982 ctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
||| || ||||| |||||||| || || ||||||||||||||||||
Sbjct: 455 cttggccaatccaagcatgttgagtgtaccaaccacattggtcttg 410
>gb|BM443269.2|BM443269 EBro02_SQ003_F16_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ003_F16 5', mRNA sequence
Length = 439
Score = 260 bits (131), Expect = 1e-067
Identities = 290/343 (84%)
Strand = Plus / Minus
Query: 624 tcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcac 683
||||||| |||||||||||||| || || || ||||| ||||| || ||||| || || |
Sbjct: 439 tcatcagcccctcaaccagatcggagacgtactggaagctcctcgtctgcttgccgtcgc 380
Query: 684 cataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggc 743
| || ||||||| ||||||||||||||||||||| || |||||||| ||||| || ||||
Sbjct: 379 cgtacaccgtcaggggctccttcctcagtgcctgggcgacaaagttgctgacgacccggc 320
Query: 744 catcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcctaacctcaa 803
||||||| ||||||||||| || || || || |||||||| || |||||||| ||||| |
Sbjct: 319 catcgtcgatgcacatgcgcggcccgtaggtgttgaagatccgcgcgatcctcacctcga 260
Query: 804 ggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgt 863
||||||| || |||||||| |||||||||| ||||| || || | ||||||||| ||||
Sbjct: 259 ggttggcgccgcggtggtagtccatggtcagtgtttccgccgtcctcttgccctcgtcgt 200
Query: 864 aacagctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgct 923
| ||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 199 agcagctccgaacaccgatggggttgacgttgccccagtaggtctcgacctgggggtgct 140
Query: 924 ggagaggatcaccatagacctcactggtactggtgaggaggaa 966
|||| || || || |||||||| ||||| ||||||||||||||
Sbjct: 139 ggagtgggtcgccgtagacctcgctggtgctggtgaggaggaa 97
>gb|BF260520.3|BF260520 HVSMEf0022D16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022D16f, mRNA sequence
Length = 691
Score = 252 bits (127), Expect = 3e-065
Identities = 310/371 (83%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 375 tggtcgccgaatatccgcttgcggaagtcggtaaccatgaggggcaggccgtcacggagg 316
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||| ||||||||
Sbjct: 315 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcatgcgcttg 256
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
| ||||||||| |||||||||| |||||||||||||| |||||||||| ||||||||||
Sbjct: 255 tacgggtcgtcatgggtgttctcacggaactcgatccgcgcgttggggtagatggtgtcc 196
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| ||||| ||||| || || |||||||||||||| || ||||| ||| ||||||||||
Sbjct: 195 tgcacaacgttggccagttccagcatggtgaactcaccggggttgcccgagttgaatggc 136
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
| | || ||||||||||||||| ||||| |||||||||| |||||||| |||||
Sbjct: 135 acaatgtgatcgccttccatcagcctcatcgccccctcaaccaaatcagaaaggtattgt 76
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
||||||||||| ||||| ||||| || ||| ||||||| ||||||||| | || || |||
Sbjct: 75 aaactcctggtgtgcttgccatcgccgtaagccgtcaaaggctccttcgttagcgcgtga 16
Query: 719 gcaacaaagtt 729
||| |||||||
Sbjct: 15 gcatcaaagtt 5
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 59 tctcaacaaagaattaga 76
||||||||||||||||||
Sbjct: 658 tctcaacaaagaattaga 641
>gb|AJ463159.1|AJ463159 AJ463159 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200085A08F1, mRNA sequence
Length = 420
Score = 240 bits (121), Expect = 1e-061
Identities = 232/269 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 269 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 210
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || ||||||||||| |||||| || | |||| || ||||||||||||
Sbjct: 209 gcgatcttgggctcccacccgagttgctcctttgccttggtgatatctggcttgcgcttg 150
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 149 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 90
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 89 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 30
Query: 599 cccacatgctcgccttccatcagcttcat 627
|| | || || |||||||||||| ||||
Sbjct: 29 ccaatgtgatcaccttccatcagcctcat 1
>gb|AV909659.1|AV909659 AV909659 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak13i23 5', mRNA sequence
Length = 521
Score = 236 bits (119), Expect = 2e-060
Identities = 253/295 (85%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 297 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 238
Query: 419 gggatcttcggttcccacccgaggaactccttg-gcgcggctgatgtcgggcttgcgctt 477
| |||||| || |||||||| || ||||||| || | |||| || |||||||||||
Sbjct: 237 gcgatcttgggctcccacccaagttgctccttgtgccttggtgatatctggcttgcgctt 178
Query: 478 gtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtc 537
||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||
Sbjct: 177 gtgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtc 118
Query: 538 ctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatgg 597
||||||||||||||| || || |||||||||||||| || ||||| |||| |||||||||
Sbjct: 117 ctggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatgg 58
Query: 598 ccccacatgctcgcctt-ccatcagcttcatcagaccctcaaccagatcagaaac 651
||| | || || |||| |||||||| |||||| |||||||||| |||||||||
Sbjct: 57 cccaatgtgatcaccttnccatcagcctcatcaacccctcaaccaaatcagaaac 3
>gb|AJ463158.1|AJ463158 AJ463158 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200037F02F1, mRNA sequence
Length = 360
Score = 234 bits (118), Expect = 7e-060
Identities = 211/242 (87%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 259 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 200
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || ||||||||||| |||||| || | |||| || ||||||||||||
Sbjct: 199 gcgatcttgggctcccacccgagttgctcctttgccttggtgatatctggcttgcgcttg 140
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 139 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 80
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||||
Sbjct: 79 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatggc 20
Query: 599 cc 600
||
Sbjct: 19 cc 18
>gb|AL505147.1|AL505147 AL505147 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I19V 5', mRNA sequence
Length = 647
Score = 232 bits (117), Expect = 3e-059
Identities = 211/239 (88%), Gaps = 3/239 (1%)
Strand = Plus / Minus
Query: 791 atcctaacctcaa-ggttggcaccacggtggtaatccatggtcaacgtttca-gctgtac 848
||||||||||||| ||||||||||||||||||| |||||| |||| |||||| |||||||
Sbjct: 588 atcctaacctcaaaggttggcaccacggtggtagtccatg-tcaaggtttcaagctgtac 530
Query: 849 gcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtct 908
|||||||||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 529 gcttgccctcgtcgtagcaactcctgacaccgatggggttgacattgccccagtaggtct 470
Query: 909 ccacctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacc 968
||||||| |||||||| || |||||||| |||||||| || || |||||||||||||||
Sbjct: 469 ccacctgagggtgctgnaggggatcaccgtagacctcgctagtgctggtgaggaggaact 410
Query: 969 tggcgttgatcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|||| ||||||||| | ||||| |||||||| || || ||||||||||||||||||
Sbjct: 409 tggcaccgatcctcttggncaatccaagcatgttgagtgtaccaaccacattggtcttg 351
>gb|BJ549915.1|BJ549915 BJ549915 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36d06 3', mRNA sequence
Length = 463
Score = 228 bits (115), Expect = 4e-058
Identities = 210/242 (86%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 221 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 280
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 281 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 340
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 341 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 400
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||| || || |||||||||||||| || |||| |||| ||||||||||
Sbjct: 401 tggacaaccttggccagttccagcatggtgaactcaccgnggttgcccaagttgaatggc 460
Query: 599 cc 600
||
Sbjct: 461 cc 462
>gb|BE215685.3|BE215685 HV_CEb0007P22f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0007P22f, mRNA sequence
Length = 521
Score = 226 bits (114), Expect = 2e-057
Identities = 207/238 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 238 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 179
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || ||||||||||| |||||| || | |||| || ||||||||||||
Sbjct: 178 gcgatcttgggctcccacccgagttgctcctttgccttggtgatatctggcttgcgcttg 119
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 118 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 59
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatg 596
|||||||||||||| || || |||||||||||||| || ||||| |||| ||||||||
Sbjct: 58 tggacaaccttggccagttccagcatggtgaactcaccggggttgcccaagttgaatg 1
>gb|BJ464354.1|BJ464354 BJ464354 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33o24 5', mRNA sequence
Length = 592
Score = 218 bits (110), Expect = 4e-055
Identities = 185/210 (88%)
Strand = Plus / Minus
Query: 838 ttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcc 897
||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 592 ttcagctgtacgcttgccctcgtcgtagcaactcctgacaccgatggggttgacattgcc 533
Query: 898 ccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggt 957
|||||| ||||||||||| ||||||||||| |||||||| |||||||| || || |||||
Sbjct: 532 ccagtaggtctccacctgagggtgctggaggggatcaccgtagacctcgctagtgctggt 473
Query: 958 gaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaaccac 1017
|||||||||| |||| ||||||||| || ||||| |||||||| || || ||||||||
Sbjct: 472 gaggaggaacttggcaccgatcctcttggccaatccaagcatgttgagtgtaccaaccac 413
Query: 1018 attggtcttgtgctatcacaaaggttaagg 1047
||||||||||||| ||| | ||||| ||||
Sbjct: 412 attggtcttgtgccatctcgaaggtcaagg 383
Score = 44.1 bits (22), Expect = 0.013
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1176 gtgaagtgaacagtaagcgaagttgcttag 1205
||||||||| |||||||| |||||||||||
Sbjct: 266 gtgaagtgagcagtaagcaaagttgcttag 237
>gb|AL502423.1|AL502423 AL502423 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I19u 3', mRNA sequence
Length = 645
Score = 214 bits (108), Expect = 6e-054
Identities = 190/216 (87%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 333 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 392
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || ||||||||||| ||||||||| | |||| || ||||||||||||
Sbjct: 393 gcgatcttgggctcccacccgagttgctccttggccttggtgatatctggcttgcgcttg 452
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 453 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 512
Query: 539 tggacaaccttgg-caagctcaagcatggtgaactc 573
||||||||||||| |||| || ||||||||||||||
Sbjct: 513 tggacaaccttggccaagttccagcatggtgaactc 548
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 59 tctcaacaaagaattaga 76
||||||||||||||||||
Sbjct: 50 tctcaacaaagaattaga 67
>gb|BF620279.2|BF620279 HVSMEc0019E20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019E20f, mRNA sequence
Length = 677
Score = 214 bits (108), Expect = 6e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 503 cggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagc 562
||||||||||||| |||||||||||||||||||||||| || |||||||| ||||| |||
Sbjct: 305 cggaactcgatccttgcgttggggtcgatggtgtcctgcaccaccttggccagctccagc 364
Query: 563 atggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagc 622
|| |||||||| || ||||| ||||||||||| || ||||| ||||| | |||||||||
Sbjct: 365 atcgtgaactcccccgggttccccaggttgaacgggcccacgtgctcctcctccatcagc 424
Query: 623 ttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatca 682
|| ||||| | |||||||||||| || || || ||||| ||||| || ||||| || ||
Sbjct: 425 ttgatcagccgctcaaccagatcggagacgtactggaagctcctcgtctgcttgccgtcg 484
Query: 683 ccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacgg 742
|| || ||||| | |||||||||||| |||||||| || |||||||| ||||| || |||
Sbjct: 485 ccgtacaccgttaggggctccttcctaagtgcctgggcgacaaagttgctgacgacccgg 544
Query: 743 ccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcctaacctca 802
|||||||| |||||||||| || || || || ||||||| || |||||||| |||||
Sbjct: 545 ccatcgtcgatgcacatgcccggcccgtacgtgatgaagatccgcgcgatcctcacctcc 604
Query: 803 aggttggc 810
||||||||
Sbjct: 605 aggttggc 612
Score = 44.1 bits (22), Expect = 0.013
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 431 tcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcggg 484
||||||||||| | ||||||||| | ||||||| |||| |||||||||||||
Sbjct: 233 tcccacccgagcagctccttggccttggtgatgtccggctcgcgcttgtgcggg 286
>gb|BU972129.1|BU972129 HB20L03r BC Hordeum vulgare subsp. vulgare cDNA clone HB20L03
5-PRIME, mRNA sequence
Length = 412
Score = 214 bits (108), Expect = 6e-054
Identities = 171/192 (89%)
Strand = Plus / Minus
Query: 836 gtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattg 895
||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 409 gtttcagctgtacgcttgccctcgtcgtagcaactcctgacaccgatggggttgacattg 350
Query: 896 ccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactg 955
|||||||| ||||||||||| ||||||||||| |||||||| |||||||| || || |||
Sbjct: 349 ccccagtaggtctccacctgagggtgctggaggggatcaccgtagacctcgctagtgctg 290
Query: 956 gtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaacc 1015
|||||||||||| |||| ||||||||| || ||||| |||||||| || || ||||||
Sbjct: 289 gtgaggaggaacttggcaccgatcctcttggccaatccaagcatgttgagtgtaccaacc 230
Query: 1016 acattggtcttg 1027
||||||||||||
Sbjct: 229 acattggtcttg 218
>gb|BE455469.2|BE455469 HVSMEg0017F01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017F01f, mRNA sequence
Length = 588
Score = 202 bits (102), Expect = 2e-050
Identities = 237/282 (84%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| |||||||||| ||||||||| || ||||| | || ||
Sbjct: 537 tggtcgccgaagatgcgggtgcggaagtcctggaccatgagcgggaggccgttccggagc 478
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| | ||| || ||||||||||| | ||||||||| | ||||||| ||||||||||||
Sbjct: 477 gccaccttgggctcccacccgagcagctccttggccttggtgatgtccggcttgcgcttg 418
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 417 tgcgggtcgtcggcggtgttggcccggaactcgatccttgcgttggggtcgatggtgtcc 358
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||| ||||| ||||| |||||||| || ||||| ||||||||||| |||
Sbjct: 357 tgcaccaccttggccagctccagcatcgtgaactcccccgggttccccaggttgaacggc 298
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaacc 640
||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 297 cccacgtgctccccctccatcagcttcatcagcccctcaacc 256
>gb|CB879349.1|CB879349 HP11N15T HP Hordeum vulgare subsp. vulgare cDNA clone HP11N15
5-PRIME, mRNA sequence
Length = 604
Score = 200 bits (101), Expect = 9e-050
Identities = 164/185 (88%)
Strand = Plus / Minus
Query: 843 ctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagt 902
|||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||||||
Sbjct: 604 ctgtacgcttgccctcgtcgtagcaactcctgacaccgatggggttgacattgccccagt 545
Query: 903 aagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtgagga 962
| ||||||||||| ||||||||||| |||||||| |||||||| || || ||||||||||
Sbjct: 544 aggtctccacctgagggtgctggaggggatcaccgtagacctcgctagtgctggtgagga 485
Query: 963 ggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaaccacattgg 1022
||||| |||| ||||||||| || ||||| |||||||| || || |||||||||||||
Sbjct: 484 ggaacttggcaccgatcctcttggccaatccaagcatgttgagtgtaccaaccacattgg 425
Query: 1023 tcttg 1027
|||||
Sbjct: 424 tcttg 420
>gb|BF631172.1|BF631172 HVSMEb0015C21f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0015C21f, mRNA sequence
Length = 764
Score = 198 bits (100), Expect = 4e-049
Identities = 199/232 (85%)
Strand = Plus / Minus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
||||||||||| ||| || |||||||| ||||||| ||| ||| |||||| |||||||||
Sbjct: 466 aacctcaaggtcggccccccggtggtagtccatggccaaggttccagctgcacgcttgcc 407
Query: 856 ctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacctg 915
||| ||| | || ||| ||||||||||||| ||||||||||||||| | ||||||||||
Sbjct: 406 ctcgtcgcagcaactcatgacaccgatggggttgacattgccccagcaggtctccacctc 347
Query: 916 cgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacctggcgtt 975
||||||||||| |||||||| |||||||| || || ||||||||||||||| ||||
Sbjct: 346 agggtgctggaggggatcaccgtagacctcgctagtgctggtgaggaggaacttggcacc 287
Query: 976 gatcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||| || ||||| |||||||| || || ||||||||||||||||||
Sbjct: 286 gatcctcttggccaatccaagcatgttgagtgtaccaaccacattggtcttg 235
>gb|BF259502.2|BF259502 HVSMEf0019I02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019I02f, mRNA sequence
Length = 524
Score = 188 bits (95), Expect = 4e-046
Identities = 185/215 (86%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 309 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 368
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 369 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 428
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 429 tgcgggtcgtcctgagtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 488
Query: 539 tggacaaccttggcaagctcaagcatggtgaactc 573
||||||||||| || || | ||||||||||||||
Sbjct: 489 tggacaacctttgccagtttcagcatggtgaactc 523
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 59 tctcaacaaagaattaga 76
||||||||||||||||||
Sbjct: 26 tctcaacaaagaattaga 43
>gb|BG418221.1|BG418221 HVSMEk0021P03f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0021P03f, mRNA sequence
Length = 491
Score = 182 bits (92), Expect = 2e-044
Identities = 227/272 (83%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| ||||| |||||||||| ||||||||| || ||||| | || ||
Sbjct: 219 tggtcgccgaaaatgcgggtgcggaagtcctggaccatgagcgggaggccgttccggagc 278
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| | ||| || ||||||||||| | ||||||||| | ||||||| ||||||||||||
Sbjct: 279 gccaccttgggctcccacccgagcagctccttggccttggtgatgtccggcttgcgcttg 338
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 339 tgcgggtcgtcggcggtgttggcccggaactcgatccttgcgttggggtcgatggtgtcc 398
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||| ||||| ||||| |||||||| || ||||| ||||||||||| |||
Sbjct: 399 tgcaccaccttggccagctccagcatcgtgaactcccccgggttccccaggttgaacggc 458
Query: 599 cccacatgctcgccttccatcagcttcatcag 630
||||| ||||| || |||||||||||||||||
Sbjct: 459 cccacgtgctccccctccatcagcttcatcag 490
>gb|BM370165.2|BM370165 EBro08_SQ003_D02_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_D02 5', mRNA sequence
Length = 242
Score = 182 bits (92), Expect = 2e-044
Identities = 173/200 (86%)
Strand = Plus / Minus
Query: 431 tcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcc 490
||||||||||| | ||||||||| | ||||||| |||||||||||||||||||||||
Sbjct: 202 tcccacccgagcagctccttggccttggtgatgtccggcttgcgcttgtgcgggtcgtcg 143
Query: 491 tgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttg 550
|||||| ||||||||||||| |||||||||||||||||||||||| || ||||||
Sbjct: 142 gcggtgttggcccggaactcgatccttgcgttggggtcgatggtgtcctgcaccaccttg 83
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcg 610
|| ||||| ||||| |||||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 82 gccagctccagcatcgtgaactcccccgggttccccaggttgaacggccccacgtgctcc 23
Query: 611 ccttccatcagcttcatcag 630
|| |||||||||||||||||
Sbjct: 22 ccctccatcagcttcatcag 3
>gb|AJ436651.1|AJ436651 AJ436651 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200036H03F1, mRNA sequence
Length = 466
Score = 176 bits (89), Expect = 1e-042
Identities = 161/185 (87%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 197 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 138
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || ||||||||||| |||||| || | |||| || ||||||||||||
Sbjct: 137 gcgatcttgggctcccacccgagttgctcctttgccttggtgatatctggcttgcgcttg 78
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 77 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtgtcc 18
Query: 539 tggac 543
|||||
Sbjct: 17 tggac 13
>gb|CA017471.1|CA017471 HV05E22r HV Hordeum vulgare subsp. vulgare cDNA clone HV05E22
5-PRIME, mRNA sequence
Length = 500
Score = 172 bits (87), Expect = 2e-041
Identities = 141/159 (88%)
Strand = Plus / Minus
Query: 869 ctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgctggaga 928
||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 498 ctcctgacaccgatggggttgacattgccccagtaggtctccacctgagggtgctggagg 439
Query: 929 ggatcaccatagacctcactggtactggtgaggaggaacctggcgttgatcctctttgct 988
|||||||| |||||||| || || ||||||||||||||| |||| ||||||||| ||
Sbjct: 438 ggatcaccgtagacctcgctagtgctggtgaggaggaacttggcaccgatcctcttggcc 379
Query: 989 aatccgagcatgttcagagtcccaaccacattggtcttg 1027
||||| |||||||| || || ||||||||||||||||||
Sbjct: 378 aatccaagcatgttgagtgtaccaaccacattggtcttg 340
>gb|BQ757060.1|BQ757060 EBem10_SQ002_K18_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ002_K18 5', mRNA sequence
Length = 315
Score = 168 bits (85), Expect = 3e-040
Identities = 154/177 (87%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 177 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 118
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || ||||||||||| ||||||||| | |||| || ||||||||||||
Sbjct: 117 gcgatcttgggctcccacccgagttgctccttggccttggtgatatctggcttgcgcttg 58
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtg 535
|||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 57 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcgatggtg 1
>gb|BJ456934.1|BJ456934 BJ456934 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25e05 3', mRNA sequence
Length = 434
Score = 163 bits (82), Expect = 2e-038
Identities = 208/250 (83%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| |||||||||| ||||||||| || ||||| | || ||
Sbjct: 185 tggtcgccgaagatgcgggtgcggaagtcctggaccatgagcgggaggccgttccggagc 244
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| | ||| || ||||||||||| | ||||||||| | ||||||| ||||||||||||
Sbjct: 245 gccaccttgggctcccacccgagcagctccttggccttggtgatgtccggcttgcgcttg 304
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 305 tgcgggtcgtcggcggtgttggcccggaactcgatccttgcgttggggtcgatggtgtcc 364
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||| ||||| ||||| |||||||| || ||||| ||||||||||| |||
Sbjct: 365 tgcaccaccttggccagctccagcatcgtgaactcccccgggttccccaggttgaacggc 424
Query: 599 cccacatgct 608
||||| ||||
Sbjct: 425 cccacgtgct 434
>gb|BM096802.2|BM096802 EBma07_SQ001_L07_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ001_L07 5', mRNA sequence
Length = 289
Score = 157 bits (79), Expect = 1e-036
Identities = 163/191 (85%)
Strand = Plus / Minus
Query: 776 ttgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaac 835
|||||||| || |||||||| ||||| |||||||| || |||||||| ||||||||||
Sbjct: 278 ttgaagatccgcgcgatcctcacctcgaggttggcgccgcggtggtagtccatggtcagt 219
Query: 836 gtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattg 895
||||| || || | ||||||||| ||||| ||||||| ||||||||||| ||||| |||
Sbjct: 218 gtttccgccgtcctcttgccctcgtcgtagcagctccgaacaccgatggggttgacgttg 159
Query: 896 ccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactg 955
|||||||| ||||| ||||| ||||||||||| || || || |||||||| ||||| |||
Sbjct: 158 ccccagtaggtctcgacctgggggtgctggagtgggtcgccgtagacctcgctggtgctg 99
Query: 956 gtgaggaggaa 966
|||||||||||
Sbjct: 98 gtgaggaggaa 88
>gb|BJ544855.1|BJ544855 BJ544855 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak39a18 5', mRNA sequence
Length = 161
Score = 145 bits (73), Expect = 5e-033
Identities = 130/149 (87%)
Strand = Plus / Minus
Query: 560 agcatggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatc 619
|||||||||||||| || ||||| |||| |||||||||||| | || || |||||||||
Sbjct: 151 agcatggtgaactcaccggggttgcccaagttgaatggcccaatgtgatcaccttccatc 92
Query: 620 agcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttcca 679
||| |||||| |||||||||| ||||||||| ||||||||||||||||| ||||| |||
Sbjct: 91 agcctcatcaacccctcaaccaaatcagaaacgtattggaaactcctggtctgcttgcca 32
Query: 680 tcaccataaaccgtcaagggctccttcct 708
|| || ||||||||||| |||||||||||
Sbjct: 31 tcgccgtaaaccgtcaaaggctccttcct 3
>gb|BI947157.1|BI947157 HVSMEl0003P09f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0003P09f, mRNA sequence
Length = 498
Score = 143 bits (72), Expect = 2e-032
Identities = 147/172 (85%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 172 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 113
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||| | | |||| || ||||||||||||
Sbjct: 112 gcgatcttgggctcccacccaagttgctccttgcccttggtgatatctggcttgcgcttg 53
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcga 530
|||||||||||||||||||||| |||||||||||||| ||||| |||||||
Sbjct: 52 tgcgggtcgtcctgggtgttctcacggaactcgatccgcgcgttcgggtcga 1
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 59 tctcaacaaagaattaga 76
||||||||||||||||||
Sbjct: 455 tctcaacaaagaattaga 438
>gb|BQ757374.1|BQ757374 EBem10_SQ003_O19_R embryo, 2 Day germination, no treatment, cv Optic,
EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ003_O19 5', mRNA sequence
Length = 285
Score = 139 bits (70), Expect = 3e-031
Identities = 121/138 (87%)
Strand = Plus / Minus
Query: 890 acattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactg 949
|||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||| ||
Sbjct: 285 acattgccccagtaggtctccacctgagggtgctggaggggatcaccgtagacctcgcta 226
Query: 950 gtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtc 1009
|| ||||||||||||||| |||| ||||||||| || ||||| |||||||| || ||
Sbjct: 225 gtgctggtgaggaggaacttggcaccgatcctcttggccaatccaagcatgttgagtgta 166
Query: 1010 ccaaccacattggtcttg 1027
||||||||||||||||||
Sbjct: 165 ccaaccacattggtcttg 148
>gb|CB877081.1|CB877081 HP03I02T HP Hordeum vulgare subsp. vulgare cDNA clone HP03I02
5-PRIME, mRNA sequence
Length = 340
Score = 125 bits (63), Expect = 4e-027
Identities = 174/211 (82%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| |||||||||| ||||||||| || ||||| | || ||
Sbjct: 236 tggtcgccgaagatgcgggtgcggaagtcctggaccatgagcgggaggccgttccggagc 177
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| | ||| || ||||||||||| | ||||||||| | ||||||| ||||||||||||
Sbjct: 176 gccaccttgggctcccacccgagcagctccttggccttggtgatgtccggcttgcgcttg 117
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 116 tgcgggtcgtcggcggtgttggcccggaactcgatccttgcgttggggtcgatggtgtcc 57
Query: 539 tggacaaccttggcaagctcaagcatggtga 569
|| || |||||||| ||||| ||||| ||||
Sbjct: 56 tgcaccaccttggccagctccagcatcgtga 26
>gb|BI951009.1|BI951009 HVSMEl0024A04f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0024A04f, mRNA sequence
Length = 852
Score = 123 bits (62), Expect = 2e-026
Identities = 196/238 (82%), Gaps = 2/238 (0%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| |||||||||| ||||||||| || ||||| | || ||
Sbjct: 241 tggtcgccgaagatgcgggtgcggaagtcctggaccatgagcgggaggccgttccggagc 182
Query: 419 gggatcttcggt-tcccacccgaggaactccttggcgcggctgatgtcgggcttgcgctt 477
| | |||||| ||||||| ||| | ||||||||| | ||||||| |||||||||||
Sbjct: 181 gccaccttcgggctcccaccggagcagctccttggccttggtgatgtccggcttgcgctt 122
Query: 478 gtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtc 537
|||||||||||| |||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 121 gtgcgggtcgtcggcggtgttggcccggaactcgatccttgcgttggggtcgatggtgtc 62
Query: 538 ctggacaaccttggcaagctcaagcatggtgaactcgccagggtt-acccaggttgaa 594
||| || |||||||| ||||| ||||| |||||||| || ||||| |||||||||||
Sbjct: 61 ctgcaccaccttggccagctccagcatcgtgaactcccccgggttcccccaggttgaa 4
>gb|BE060857.3|BE060857 HVSMEg0013J21f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0013J21f, mRNA sequence
Length = 481
Score = 123 bits (62), Expect = 2e-026
Identities = 122/142 (85%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 143 tggtcgccgaatatccgcttgcggaagtcggtaaccatgagggggaggccgtcacggagg 84
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| |||||| || |||||||| || ||||||||| | |||| || ||||||||||||
Sbjct: 83 gcgatcttgggctcccacccaagttgctccttggccttggtgatatctggcttgcgcttg 24
Query: 479 tgcgggtcgtcctgggtgttct 500
||||||||||||||||||||||
Sbjct: 23 tgcgggtcgtcctgggtgttct 2
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 59 tctcaacaaagaattaga 76
||||||||||||||||||
Sbjct: 426 tctcaacaaagaattaga 409
>gb|CA027837.1|CA027837 HZ60D01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60D01
5-PRIME, mRNA sequence
Length = 364
Score = 123 bits (62), Expect = 2e-026
Identities = 128/150 (85%)
Strand = Plus / Minus
Query: 817 gtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgac 876
|||||| |||||||||| ||||| || || | ||||||||| ||||| ||||||| ||
Sbjct: 364 gtggtagtccatggtcagtgtttccgccgtcctcttgccctcgtcgtagcagctccgaac 305
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||| || || ||
Sbjct: 304 accgatggggttgacgttgccccagtaggtctcgacctgggggtgctggagtgggtcgcc 245
Query: 937 atagacctcactggtactggtgaggaggaa 966
|||||||| ||||| ||||||||||||||
Sbjct: 244 gtagacctcgctggtgctggtgaggaggaa 215
>gb|CB879741.1|CB879741 HP03I02w HP Hordeum vulgare subsp. vulgare cDNA clone HP03I02
3-PRIME, mRNA sequence
Length = 387
Score = 119 bits (60), Expect = 3e-025
Identities = 165/200 (82%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| |||||||||| ||||||||| || ||||| | || ||
Sbjct: 184 tggtcgccgaagatgcgggtgcggaagtcctggaccatgagcgggaggccgttccggagc 243
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| | ||| || ||||||||||| | ||||||||| | ||||||| ||||||||||||
Sbjct: 244 gccaccttgggctcccacccgagcagctccttggccttggtgatgtccggcttgcgcttg 303
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 304 tgcgggtcgtcggcggtgttggcccggaactcgatccttgcgttggggtcgatggtgtcc 363
Query: 539 tggacaaccttggcaagctc 558
|| || |||||||| |||||
Sbjct: 364 tgcaccaccttggccagctc 383
>gb|BQ763370.1|BQ763370 EBro02_SQ008_K01_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_K01 5', mRNA sequence
Length = 532
Score = 115 bits (58), Expect = 4e-024
Identities = 112/130 (86%)
Strand = Plus / Minus
Query: 546 ccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacat 605
||||||| ||||| ||||| |||||||| || ||||| ||||||||||| |||||||| |
Sbjct: 139 ccttggccagctccagcatcgtgaactcccccgggttccccaggttgaacggccccacgt 80
Query: 606 gctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcc 665
|||| || ||||||||||||||||| |||||||||||||| || || || ||||| ||||
Sbjct: 79 gctccccctccatcagcttcatcagcccctcaaccagatcggagacgtactggaagctcc 20
Query: 666 tggtttgctt 675
| || |||||
Sbjct: 19 tcgtctgctt 10
Score = 44.1 bits (22), Expect = 0.013
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggcc 408
||||||||||||||||| |||||||||| ||||||||| || |||||
Sbjct: 342 tggtcgccgaagatgcgggtgcggaagtcctggaccatgagcgggaggcc 293
>gb|BU972342.1|BU972342 HB21G01r BC Hordeum vulgare subsp. vulgare cDNA clone HB21G01
5-PRIME, mRNA sequence
Length = 407
Score = 107 bits (54), Expect = 1e-021
Identities = 150/182 (82%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| |||||||||| ||||||||| || ||||| | || ||
Sbjct: 202 tggtcgccgaagatgcgggtgcggaagtcctggaccatgagcgggaggccgttccggagc 143
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
| | ||| || ||||||||||| | ||||||||| | ||||||| ||||||||||||
Sbjct: 142 gccaccttgggctcccacccgagcagctccttggccttggtgatgtccggcttgcgcttg 83
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 82 tgcgggtcgtcggcggtgttggcccggaactcgatccttgcgttggggtcgatggtgtcc 23
Query: 539 tg 540
||
Sbjct: 22 tg 21
>gb|BM096716.2|BM096716 EBma07_SQ001_G01_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ001_G01 5', mRNA sequence
Length = 278
Score = 101 bits (51), Expect = 6e-020
Identities = 120/143 (83%)
Strand = Plus / Minus
Query: 824 tccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatg 883
|||||||||| ||||| || || | |||||||| | ||| ||||||| |||||||||
Sbjct: 276 tccatggtcagtgtttccgccgtcctcttgccctggtggtagcagctccgaacaccgatg 217
Query: 884 ggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacc 943
|| ||||| ||||||||||| ||||| ||||| ||||||||||| || || || ||||||
Sbjct: 216 gggttgacgttgccccagtaggtctcgacctgggggtgctggagtgggtcgccgtagacc 157
Query: 944 tcactggtactggtgaggaggaa 966
|| ||||| ||||||||||||||
Sbjct: 156 tcgctggtgctggtgaggaggaa 134
>gb|BU979918.1|BU979918 HA17M18r HA Hordeum vulgare subsp. vulgare cDNA clone HA17M18
5-PRIME, mRNA sequence
Length = 585
Score = 101 bits (51), Expect = 6e-020
Identities = 126/151 (83%)
Strand = Plus / Minus
Query: 636 caaccagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
||||||||||||||||||| || ||||| | ||||| |||||||||||||| || ||||
Sbjct: 570 caaccagatcagaaacatactgaaaacttcgagtttgttttccatcaccatatactgtca 511
Query: 696 agggctccttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgc 755
|| | || | ||||||||| |||||||| || || || ||||| ||||| || | ||
Sbjct: 510 ttggatgtttgcgcagtgcctgtgcaacaaaattgctaaccacacgaccatcatccaggc 451
Query: 756 acatgcgagggccatatgtattgaagatacg 786
|||| ||||||||||||||||||||||||||
Sbjct: 450 acatacgagggccatatgtattgaagatacg 420
>gb|BJ547904.1|BJ547904 BJ547904 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41g23 5', mRNA sequence
Length = 681
Score = 101 bits (51), Expect = 6e-020
Identities = 126/151 (83%)
Strand = Plus / Minus
Query: 636 caaccagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
||||||||||||||||||| || ||||| | ||||| |||||||||||||| || ||||
Sbjct: 644 caaccagatcagaaacatactgaaaacttcgagtttgttttccatcaccatatactgtca 585
Query: 696 agggctccttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgc 755
|| | || | ||||||||| |||||||| || || || ||||| ||||| || | ||
Sbjct: 584 ttggatgtttgcgcagtgcctgtgcaacaaaattgctaaccacacgaccatcatccaggc 525
Query: 756 acatgcgagggccatatgtattgaagatacg 786
|||| ||||||||||||||||||||||||||
Sbjct: 524 acatacgagggccatatgtattgaagatacg 494
>gb|BU982278.1|BU982278 HA26A18r HA Hordeum vulgare subsp. vulgare cDNA clone HA26A18
5-PRIME, mRNA sequence
Length = 565
Score = 85.7 bits (43), Expect = 4e-015
Identities = 209/263 (79%), Gaps = 1/263 (0%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
|||||||| || |||| ||||||| ||||| || | |||||||||||| ||||||||
Sbjct: 316 gggtcgattgtttccttcacaacctctgcaagttccaacatggtgaactctccagggttt 257
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| || || | ||| || | |||||||| ||||| || ||||||||
Sbjct: 256 cctagattgaaagggccaatatgatcactctccatcagagccatcaatccagcaaccaga 197
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||||| || ||||| | ||||| |||||||||||||| || |||| || |
Sbjct: 196 tcagaaacatactgaaaacttcgagtttgttttccatcaccatatactgtcattggatgt 137
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 763
|| | ||||||||| |||||||| || || || ||||| ||||| || | |||||| |||
Sbjct: 136 ttgcgcagtgcctgtgcaacaaaattgctaaccacacgaccatcatccaggcacatacga 77
Query: 764 gggccatatgtattgaagatacg 786
|||||||||||||| ||||||||
Sbjct: 76 gggccatatgtatt-aagatacg 55
>gb|CB877082.1|CB877082 HP03I03T HP Hordeum vulgare subsp. vulgare cDNA clone HP03I03
5-PRIME, mRNA sequence
Length = 215
Score = 85.7 bits (43), Expect = 4e-015
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 431 tcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcc 490
||||||||||| | ||||||||| | ||||||| ||||||||| ||||||||| |||
Sbjct: 165 tcccacccgagcagctccttggccttggtgatgtccggcttgcgcctgtgcgggttgtcg 106
Query: 491 tgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttg 550
|||||| ||| ||||||||| ||||||||||||||||||||| || || ||||||
Sbjct: 105 gcggtgttggcccggtactcgatccttgcgttggggtcgatggtgtcatgcaccaccttg 46
Query: 551 gcaagctcaagcatggtga 569
|| ||||| ||||| ||||
Sbjct: 45 gccagctctagcatcgtga 27
>gb|AL503252.1|AL503252 AL503252 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01F04T 5', mRNA sequence
Length = 700
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 593 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 534
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 533 ctccgtctgaggatgctcaagaggatcaccata 501
>gb|AL506572.1|AL506572 AL506572 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03J03T 5',
mRNA sequence
Length = 700
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 621 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 562
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 561 ctccgtctgaggatgctcaagaggatcaccata 529
>gb|AL506691.1|AL506691 AL506691 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03P08T 5',
mRNA sequence
Length = 700
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 607 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 548
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 547 ctccgtctgaggatgctcaagaggatcaccata 515
>gb|AL507716.1|AL507716 AL507716 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06K11V 5',
mRNA sequence
Length = 700
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 620 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 561
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 560 ctccgtctgaggatgctcaagaggatcaccata 528
>gb|BF255870.2|BF255870 HVSMEf0008A22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0008A22f, mRNA sequence
Length = 871
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 632 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 573
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 572 ctccgtctgaggatgctcaagaggatcaccata 540
>gb|BF260905.2|BF260905 HVSMEf0023E01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023E01f, mRNA sequence
Length = 758
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 704 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 645
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 644 ctccgtctgaggatgctcaagaggatcaccata 612
>gb|BE454127.2|BE454127 HVSMEh0080M10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0080M10f, mRNA sequence
Length = 716
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 626 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 567
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 566 ctccgtctgaggatgctcaagaggatcaccata 534
>gb|BI946633.1|BI946633 HVSMEl0001F12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0001F12f, mRNA sequence
Length = 786
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 202 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 143
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 142 ctccgtctgaggatgctcaagaggatcaccata 110
Score = 44.1 bits (22), Expect = 0.013
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||||| |||||||||||||| ||||||
Sbjct: 336 gcctgagcaatgaagttaccaacaacacggccatcatcaatg 295
>gb|BI959050.1|BI959050 HVSMEn0017O17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017O17f, mRNA sequence
Length = 648
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 613 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 554
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 553 ctccgtctgaggatgctcaagaggatcaccata 521
>gb|BI959464.1|BI959464 HVSMEn0019M08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019M08f, mRNA sequence
Length = 654
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 560 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 501
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 500 ctccgtctgaggatgctcaagaggatcaccata 468
>gb|BI960239.1|BI960239 HVSMEn0023O02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023O02f, mRNA sequence
Length = 646
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 631 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 572
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 571 ctccgtctgaggatgctcaagaggatcaccata 539
>gb|BI960443.1|BI960443 HVSMEn0024J22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024J22f, mRNA sequence
Length = 641
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 616 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 557
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 556 ctccgtctgaggatgctcaagaggatcaccata 524
>gb|BE231175.2|BE231175 HVSMEg0017G06f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017G06f, mRNA sequence
Length = 939
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 139 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 80
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 79 ctccgtctgaggatgctcaagaggatcaccata 47
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 273 gcctgagcaatgaagttactaacaacacggccatcatcaatg 232
>gb|AW983194.3|AW983194 HVSMEg0008K01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0008K01f, mRNA sequence
Length = 811
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 630 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 571
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 570 ctccgtctgaggatgctcaagaggatcaccata 538
>gb|AV910273.1|AV910273 AV910273 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak3p07 5', mRNA sequence
Length = 468
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 177 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 118
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 117 ctccgtctgaggatgctcaagaggatcaccata 85
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 311 gcctgagcaatgaagttactaacaacacggccatcatcaatg 270
>gb|AV912858.1|AV912858 AV912858 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j24 5', mRNA sequence
Length = 599
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 494 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 435
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 434 ctccgtctgaggatgctcaagaggatcaccata 402
>gb|AV913541.1|AV913541 AV913541 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22h07 5', mRNA sequence
Length = 573
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 180 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 121
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 120 ctccgtctgaggatgctcaagaggatcaccata 88
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 314 gcctgagcaatgaagttactaacaacacggccatcatcaatg 273
>gb|AV913569.1|AV913569 AV913569 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i15 5', mRNA sequence
Length = 582
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 420 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 361
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 360 ctccgtctgaggatgctcaagaggatcaccata 328
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 554 gcctgagcaatgaagttactaacaacacggccatcatcaatg 513
>gb|AV913652.1|AV913652 AV913652 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22n04 5', mRNA sequence
Length = 589
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 488 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 429
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 428 ctccgtctgaggatgctcaagaggatcaccata 396
>gb|AV913736.1|AV913736 AV913736 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23b18 5', mRNA sequence
Length = 660
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 296 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 237
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 236 ctccgtctgaggatgctcaagaggatcaccata 204
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 430 gcctgagcaatgaagttactaacaacacggccatcatcaatg 389
>gb|AV914047.1|AV914047 AV914047 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4f20 5', mRNA sequence
Length = 449
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 149 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 90
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 89 ctccgtctgaggatgctcaagaggatcaccata 57
Score = 46.1 bits (23), Expect = 0.003
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 716 tgagcaacaaagttactgacaacacggccatcgtcaatg 754
||||||| |||||||| |||||||||||||| ||||||
Sbjct: 280 tgagcaatgaagttactaacaacacggccatcatcaatg 242
>gb|AV915529.1|AV915529 AV915529 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14p07 5', mRNA sequence
Length = 645
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 397 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 338
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 337 ctccgtctgaggatgctcaagaggatcaccata 305
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 531 gcctgagcaatgaagttactaacaacacggccatcatcaatg 490
>gb|AV915934.1|AV915934 AV915934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16l08 5', mRNA sequence
Length = 661
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 619 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 560
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 559 ctccgtctgaggatgctcaagaggatcaccata 527
>gb|AV916097.1|AV916097 AV916097 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1h02 5', mRNA sequence
Length = 532
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 371 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 312
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 311 ctccgtctgaggatgctcaagaggatcaccata 279
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 505 gcctgagcaatgaagttactaacaacacggccatcatcaatg 464
>gb|AV916858.1|AV916858 AV916858 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19o01 5', mRNA sequence
Length = 404
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 298 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 239
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 238 ctccgtctgaggatgctcaagaggatcaccata 206
>gb|AV917183.1|AV917183 AV917183 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8g03 5', mRNA sequence
Length = 478
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 314 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 255
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 254 ctccgtctgaggatgctcaagaggatcaccata 222
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 448 gcctgagcaatgaagttactaacaacacggccatcatcaatg 407
>gb|BM816179.1|BM816179 HC02E01_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC02E01_T3.ab1 similar to dTDP-glucose 4,6-dehydratase,,
mRNA sequence
Length = 789
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 468 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 409
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 408 ctccgtctgaggatgctcaagaggatcaccata 376
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 602 gcctgagcaatgaagttactaacaacacggccatcatcaatg 561
>gb|BJ450393.1|BJ450393 BJ450393 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak29f24 5', mRNA sequence
Length = 637
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 517 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 458
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 457 ctccgtctgaggatgctcaagaggatcaccata 425
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 727 gttactgacaacacggccatcgtcaatg 754
|||||| |||||||||||||| ||||||
Sbjct: 637 gttactaacaacacggccatcatcaatg 610
>gb|BJ454281.1|BJ454281 BJ454281 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak46n15 5', mRNA sequence
Length = 614
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 155 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 96
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 95 ctccgtctgaggatgctcaagaggatcaccata 63
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 289 gcctgagcaatgaagttactaacaacacggccatcatcaatg 248
>gb|BJ462500.1|BJ462500 BJ462500 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28m06 5', mRNA sequence
Length = 566
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 419 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 360
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 359 ctccgtctgaggatgctcaagaggatcaccata 327
>gb|BJ462617.1|BJ462617 BJ462617 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i05 5', mRNA sequence
Length = 604
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 115 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 56
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 55 ctccgtctgaggatgctcaagaggatcaccata 23
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 249 gcctgagcaatgaagttactaacaacacggccatcatcaatg 208
>gb|BJ463235.1|BJ463235 BJ463235 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26g08 5', mRNA sequence
Length = 559
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 398 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 339
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 338 ctccgtctgaggatgctcaagaggatcaccata 306
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 532 gcctgagcaatgaagttactaacaacacggccatcatcaatg 491
>gb|BJ463694.1|BJ463694 BJ463694 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30b17 5', mRNA sequence
Length = 595
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 437 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 378
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 377 ctccgtctgaggatgctcaagaggatcaccata 345
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 571 gcctgagcaatgaagttactaacaacacggccatcatcaatg 530
>gb|BJ464032.1|BJ464032 BJ464032 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31i13 5', mRNA sequence
Length = 486
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 371 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 312
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 311 ctccgtctgaggatgctcaagaggatcaccata 279
>gb|BJ464187.1|BJ464187 BJ464187 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33d22 5', mRNA sequence
Length = 511
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 398 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 339
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 338 ctccgtctgaggatgctcaagaggatcaccata 306
>gb|BJ464470.1|BJ464470 BJ464470 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34h21 5', mRNA sequence
Length = 535
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 286 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 227
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 226 ctccgtctgaggatgctcaagaggatcaccata 194
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 420 gcctgagcaatgaagttactaacaacacggccatcatcaatg 379
>gb|BJ464957.1|BJ464957 BJ464957 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36l20 5', mRNA sequence
Length = 630
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 306 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 247
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 246 ctccgtctgaggatgctcaagaggatcaccata 214
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 440 gcctgagcaatgaagttactaacaacacggccatcatcaatg 399
>gb|BJ465124.1|BJ465124 BJ465124 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37p12 5', mRNA sequence
Length = 640
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 320 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 261
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 260 ctccgtctgaggatgctcaagaggatcaccata 228
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 454 gcctgagcaatgaagttactaacaacacggccatcatcaatg 413
>gb|BQ471323.1|BQ471323 HV02B15r HV Hordeum vulgare subsp. vulgare cDNA clone HV02B15
5-PRIME, mRNA sequence
Length = 677
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 640 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 581
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 580 ctccgtctgaggatgctcaagaggatcaccata 548
>gb|BQ472096.1|BQ472096 HV04G11r HV Hordeum vulgare subsp. vulgare cDNA clone HV04G11
5-PRIME, mRNA sequence
Length = 634
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 629 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 570
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 569 ctccgtctgaggatgctcaagaggatcaccata 537
>gb|BQ472320.1|BQ472320 HB09P05T BC Hordeum vulgare subsp. vulgare cDNA clone HB09P05
5-PRIME, mRNA sequence
Length = 700
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 637 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 578
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 577 ctccgtctgaggatgctcaagaggatcaccata 545
>gb|BQ472535.1|BQ472535 HB09E05T BC Hordeum vulgare subsp. vulgare cDNA clone HB09E05
5-PRIME, mRNA sequence
Length = 632
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 502 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 443
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 442 ctccgtctgaggatgctcaagaggatcaccata 410
Score = 44.1 bits (22), Expect = 0.013
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatg 754
|||||||| |||||||||||||| ||||||
Sbjct: 624 aagttactaacaacacggccatcatcaatg 595
>gb|BM100357.2|BM100357 EBma01_SQ001_P14_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ001_P14 5', mRNA sequence
Length = 453
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 325 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 266
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 265 ctccgtctgaggatgctcaagaggatcaccata 233
Score = 36.2 bits (18), Expect = 3.2
Identities = 27/30 (90%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatg 754
|||||| | |||||||||||||| ||||||
Sbjct: 447 aagttattaacaacacggccatcatcaatg 418
>gb|BM372796.2|BM372796 EBpi05_SQ003_P06_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ003_P06 5', mRNA sequence
Length = 563
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 171 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 112
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 111 ctccgtctgaggatgctcaagaggatcaccata 79
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 305 gcctgagcaatgaagttactaacaacacggccatcatcaatg 264
>gb|BM096945.2|BM096945 EBpi07_SQ001_O03_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_O03 5', mRNA sequence
Length = 452
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 294 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 235
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 234 ctccgtctgaggatgctcaagaggatcaccata 202
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 428 gcctgagcaatgaagttactaacaacacggccatcatcaatg 387
>gb|BM443026.2|BM443026 EBro02_SQ002_D20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_D20 5', mRNA sequence
Length = 457
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 161 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 102
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 101 ctccgtctgaggatgctcaagaggatcaccata 69
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 295 gcctgagcaatgaagttactaacaacacggccatcatcaatg 254
>gb|BM443503.2|BM443503 EBro02_SQ005_G14_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_G14 5', mRNA sequence
Length = 671
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 632 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 573
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 572 ctccgtctgaggatgctcaagaggatcaccata 540
>gb|BI777152.2|BI777152 EBro03_SQ002_C19_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_C19 5', mRNA sequence
Length = 432
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 331 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 272
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 271 ctccgtctgaggatgctcaagaggatcaccata 239
>gb|BM371206.2|BM371206 EBro04_SQ003_N12_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_N12 5', mRNA sequence
Length = 632
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 593 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 534
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 533 ctccgtctgaggatgctcaagaggatcaccata 501
>gb|BQ759253.1|BQ759253 EBpi01_SQ003_D23_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_D23 5', mRNA sequence
Length = 448
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 126 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 67
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 66 ctccgtctgaggatgctcaagaggatcaccata 34
Score = 46.1 bits (23), Expect = 0.003
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 716 tgagcaacaaagttactgacaacacggccatcgtcaatg 754
||||||| |||||||| |||||||||||||| ||||||
Sbjct: 257 tgagcaatgaagttactaacaacacggccatcatcaatg 219
>gb|BQ762329.1|BQ762329 EBro01_SQ005_C16_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_C16 5', mRNA sequence
Length = 610
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 220 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 161
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 160 ctccgtctgaggatgctcaagaggatcaccata 128
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 354 gcctgagcaatgaagttactaacaacacggccatcatcaatg 313
>gb|BQ764503.1|BQ764503 EBca01_SQ004_F05_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_F05 5', mRNA sequence
Length = 744
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 541 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 482
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 481 ctccgtctgaggatgctcaagaggatcaccata 449
>gb|BU968354.1|BU968354 HB07E05r BC Hordeum vulgare subsp. vulgare cDNA clone HB07E05
5-PRIME, mRNA sequence
Length = 633
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 502 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 443
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 442 ctccgtctgaggatgctcaagaggatcaccata 410
>gb|BU968575.1|BU968575 HB07P05r BC Hordeum vulgare subsp. vulgare cDNA clone HB07P05
5-PRIME, mRNA sequence
Length = 674
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 637 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 578
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 577 ctccgtctgaggatgctcaagaggatcaccata 545
>gb|BU970086.1|BU970086 HB13I23r BC Hordeum vulgare subsp. vulgare cDNA clone HB13I23
5-PRIME, mRNA sequence
Length = 488
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 385 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 326
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 325 ctccgtctgaggatgctcaagaggatcaccata 293
>gb|BU970369.1|BU970369 HB14G11r BC Hordeum vulgare subsp. vulgare cDNA clone HB14G11
5-PRIME, mRNA sequence
Length = 683
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 580 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 521
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 520 ctccgtctgaggatgctcaagaggatcaccata 488
>gb|BU973256.1|BU973256 HB24E24r BC Hordeum vulgare subsp. vulgare cDNA clone HB24E24
5-PRIME, mRNA sequence
Length = 586
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 429 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 370
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 369 ctccgtctgaggatgctcaagaggatcaccata 337
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 563 gcctgagcaatgaagttactaacaacacggccatcatcaatg 522
>gb|BU987452.1|BU987452 HF14M18r HF Hordeum vulgare subsp. vulgare cDNA clone HF14M18
5-PRIME, mRNA sequence
Length = 654
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 617 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 558
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 557 ctccgtctgaggatgctcaagaggatcaccata 525
>gb|BU988522.1|BU988522 HF17O04r HF Hordeum vulgare subsp. vulgare cDNA clone HF17O04
5-PRIME, mRNA sequence
Length = 532
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 429 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 370
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 369 ctccgtctgaggatgctcaagaggatcaccata 337
>gb|BU994833.1|BU994833 HM08F16r HM Hordeum vulgare subsp. vulgare cDNA clone HM08F16
5-PRIME, mRNA sequence
Length = 645
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 356 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 297
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 296 ctccgtctgaggatgctcaagaggatcaccata 264
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 490 gcctgagcaatgaagttactaacaacacggccatcatcaatg 449
>gb|BU997112.1|BU997112 HI06P03r HI Hordeum vulgare subsp. vulgare cDNA clone HI06P03
5-PRIME, mRNA sequence
Length = 641
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 607 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 548
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 547 ctccgtctgaggatgctcaagaggatcaccata 515
>gb|CA018953.1|CA018953 HV10D08r HV Hordeum vulgare subsp. vulgare cDNA clone HV10D08
5-PRIME, mRNA sequence
Length = 666
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 629 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 570
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 569 ctccgtctgaggatgctcaagaggatcaccata 537
>gb|CA029444.1|CA029444 HZ65D19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65D19
5-PRIME, mRNA sequence
Length = 626
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 589 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 530
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 529 ctccgtctgaggatgctcaagaggatcaccata 497
>gb|CA032127.1|CA032127 HX12B15r HX Hordeum vulgare subsp. vulgare cDNA clone HX12B15
5-PRIME, mRNA sequence
Length = 649
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 603 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 544
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 543 ctccgtctgaggatgctcaagaggatcaccata 511
>gb|CB883216.1|CB883216 HQ01I23w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ01I23
3-PRIME, mRNA sequence
Length = 654
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 629 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 570
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 569 ctccgtctgaggatgctcaagaggatcaccata 537
>gb|CB883635.1|CB883635 HQ02N10w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02N10
3-PRIME, mRNA sequence
Length = 675
Score = 65.9 bits (33), Expect = 4e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 627 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 568
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 567 ctccgtctgaggatgctcaagaggatcaccata 535
>gb|BQ470611.1|BQ470611 HX03H22r HX Hordeum vulgare subsp. vulgare cDNA clone HX03H22
5-PRIME, mRNA sequence
Length = 475
Score = 63.9 bits (32), Expect = 1e-008
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 956 gtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaacc 1015
|||||||||||| |||| ||||||||| || ||||| |||||||| || || ||||||
Sbjct: 475 gtgaggaggaacttggcaccgatcctcttggccaatccaagcatgttgagtgtaccaacc 416
Query: 1016 acattggtcttg 1027
||||||||||||
Sbjct: 415 acattggtcttg 404
>gb|CA028466.1|CA028466 HZ62B03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62B03
5-PRIME, mRNA sequence
Length = 367
Score = 63.9 bits (32), Expect = 1e-008
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 107 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 48
Query: 907 ctccacctgcgggtgctggagaggatcaccat 938
|||| ||| || |||| |||||||||||||
Sbjct: 47 ctccgtctgaggatgctcaagaggatcaccat 16
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 241 gcctgagcaatgaagttactaacaacacggccatcatcaatg 200
>gb|AL505134.1|AL505134 AL505134 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I01V 5', mRNA sequence
Length = 691
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 849 gcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtct 908
|||| ||||||||||| ||||||||||| || || || || |||||||||||||| | ||
Sbjct: 600 gcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggcct 541
Query: 909 ccacctgcgggtgctggagaggatcaccata 939
|| ||| || |||| ||||||||||||||
Sbjct: 540 ccgtctgaggatgctcaagaggatcaccata 510
>gb|AL506538.1|AL506538 AL506538 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03H14T 5',
mRNA sequence
Length = 700
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 849 gcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtct 908
|||| ||||||||||| ||||||||||| || || || || |||||||||||||| | ||
Sbjct: 616 gcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggcct 557
Query: 909 ccacctgcgggtgctggagaggatcaccata 939
|| ||| || |||| ||||||||||||||
Sbjct: 556 ccgtctgaggatgctcaagaggatcaccata 526
>gb|AL503569.1|AL503569 AL503569 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02K09T 5', mRNA sequence
Length = 700
Score = 60.0 bits (30), Expect = 2e-007
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 854 ccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacc 913
||||||||||| ||||||||||| || || || || |||||||||||||| | |||| |
Sbjct: 581 ccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggcctccgtc 522
Query: 914 tgcgggtgctggagaggatcaccata 939
|| || |||| ||||||||||||||
Sbjct: 521 tgaggatgctcaagaggatcaccata 496
>gb|AV915820.1|AV915820 AV915820 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16c09 5', mRNA sequence
Length = 490
Score = 60.0 bits (30), Expect = 2e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 737 acacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacg 786
||||| ||||| || | |||||| ||||||||||||||||||||||||||
Sbjct: 475 acacgaccatcatccaggcacatacgagggccatatgtattgaagatacg 426
>gb|AV917132.1|AV917132 AV917132 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20o08 5', mRNA sequence
Length = 447
Score = 60.0 bits (30), Expect = 2e-007
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 854 ccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacc 913
||||||||||| ||||||||||| || || || || |||||||||||||| | |||| |
Sbjct: 391 ccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggcctccgtc 332
Query: 914 tgcgggtgctggagaggatcaccata 939
|| || |||| ||||||||||||||
Sbjct: 331 tgaggatgctcaagaggatcaccata 306
>gb|BJ465044.1|BJ465044 BJ465044 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37d05 5', mRNA sequence
Length = 416
Score = 60.0 bits (30), Expect = 2e-007
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||| ||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 366 acgcttaccctcatngtagcagctcctgactccaattgggttaacattgccccagtaggc 307
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 306 ctccgtctgaggatgctcaagaggatcaccata 274
>gb|BF256552.2|BF256552 HVSMEf0010F04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010F04f, mRNA sequence
Length = 840
Score = 58.0 bits (29), Expect = 9e-007
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| ||||||||||| ||||||||||| || || || || ||||||||||||||
Sbjct: 83 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagta 27
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 217 gcctgagcaatgaagttactaacaacacggccatcatcaatg 176
>gb|BF260651.2|BF260651 HVSMEf0022J07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022J07f, mRNA sequence
Length = 803
Score = 58.0 bits (29), Expect = 9e-007
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 308 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 249
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
||| ||| || |||| ||||||||||||||
Sbjct: 248 gtccgtctgaggatgctcaagaggatcaccata 216
Score = 46.1 bits (23), Expect = 0.003
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 716 tgagcaacaaagttactgacaacacggccatcgtcaatg 754
||||||| |||||||| |||||||||||||| ||||||
Sbjct: 439 tgagcaatgaagttactaacaacacggccatcatcaatg 401
>gb|BI960578.1|BI960578 HVSMEn0025C16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025C16f, mRNA sequence
Length = 644
Score = 58.0 bits (29), Expect = 9e-007
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| || |||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 609 acgcttaccttcatcgtagcagctcctgactccaattgggttaacattgccccagtaggc 550
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 549 ctccgtctgaggatgctcaagaggatcaccata 517
>gb|BM370094.2|BM370094 EBro08_SQ002_P14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ002_P14 5', mRNA sequence
Length = 590
Score = 58.0 bits (29), Expect = 9e-007
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| ||||||||||| ||||||||||| || || || || ||||||||||||||
Sbjct: 218 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagta 162
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 352 gcctgagcaatgaagttactaacaacacggccatcatcaatg 311
>gb|CB883563.1|CB883563 HQ02K03w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02K03
3-PRIME, mRNA sequence
Length = 652
Score = 58.0 bits (29), Expect = 9e-007
Identities = 78/93 (83%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||||||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 627 acgcttaccctcatcgtagcagctcctgactccaattgg-ttaacattgccccagtaggc 569
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| || |||| ||||||||||||||
Sbjct: 568 ctccgtctgaggatgctcaagaggatcaccata 536
>gb|CK123742.1|CK123742 BES1824105d21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D215 5-PRIME, mRNA sequence
Length = 746
Score = 58.0 bits (29), Expect = 9e-007
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| ||||||||||| ||||||||||| || || || || ||||||||||||||
Sbjct: 639 acgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagta 583
>gb|AV909217.1|AV909217 AV909217 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12a20 5', mRNA sequence
Length = 630
Score = 56.0 bits (28), Expect = 3e-006
Identities = 130/164 (79%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
|||||||| || |||| ||||||| ||||| || | |||||||||||| ||||||||
Sbjct: 228 gggtcgattgtttccttcacaacctctgcaagttccaacatggtgaactctccagggttt 169
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| || || | ||| || | |||||||| ||||| || ||||||||
Sbjct: 168 cctagattgaaagggccaatatgatcactctccatcagagccatcaatccagcaaccaga 109
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccata 687
||||||||||| || ||||| | ||||| ||||||||||||||
Sbjct: 108 tcagaaacatactgaaaacttcgagtttgttttccatcaccata 65
>gb|AV911101.1|AV911101 AV911101 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12a20 3', mRNA sequence
Length = 680
Score = 56.0 bits (28), Expect = 3e-006
Identities = 130/164 (79%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
|||||||| || |||| ||||||| ||||| || | |||||||||||| ||||||||
Sbjct: 462 gggtcgattgtttccttcacaacctctgcaagttccaacatggtgaactctccagggttt 521
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| || || | ||| || | |||||||| ||||| || ||||||||
Sbjct: 522 cctagattgaaagggccaatatgatcactctccatcagagccatcaatccagcaaccaga 581
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccata 687
||||||||||| || ||||| | ||||| ||||||||||||||
Sbjct: 582 tcagaaacatactgaaaacttcgagtttgttttccatcaccata 625
>gb|BJ477449.1|BJ477449 BJ477449 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41g23 3', mRNA sequence
Length = 679
Score = 56.0 bits (28), Expect = 3e-006
Identities = 130/164 (79%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
|||||||| || |||| ||||||| ||||| || | |||||||||||| ||||||||
Sbjct: 462 gggtcgattgtttccttcacaacctctgcaagttccaacatggtgaactctccagggttt 521
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| || || | ||| || | |||||||| ||||| || ||||||||
Sbjct: 522 cctagattgaaagggccaatatgatcactctccatcagagccatcaatccagcaaccaga 581
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccata 687
||||||||||| || ||||| | ||||| ||||||||||||||
Sbjct: 582 tcagaaacatactgaaaacttcgagtttgttttccatcaccata 625
>gb|AL504464.1|AL504464 AL504464 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05F22V 5', mRNA sequence
Length = 700
Score = 54.0 bits (27), Expect = 1e-005
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 849 gcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtct 908
|||| ||||||||||| ||||||||||| || || || || ||||||||||||| | ||
Sbjct: 629 gcttaccctcatcgtagcagctcctgactccaattgggttaccattgccccagtaggcct 570
Query: 909 ccacctgcgggtgctggagaggatcaccata 939
|| ||| || |||| ||||||||||||||
Sbjct: 569 ccgtctgaggatgctcaagaggatcaccata 539
>gb|BI956677.1|BI956677 HVSMEn0004L08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004L08f, mRNA sequence
Length = 812
Score = 54.0 bits (27), Expect = 1e-005
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 849 gcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtct 908
|||| ||||||||||| |||||| |||| || || || || |||||||||||||| | ||
Sbjct: 617 gcttaccctcatcgtagcagctcgtgactccaattgggttaacattgccccagtaggcct 558
Query: 909 ccacctgcgggtgctggagaggatcaccata 939
|| ||| || |||| ||||||||||||||
Sbjct: 557 ccgtctgaggatgctcaagaggatcaccata 527
>gb|BI959302.1|BI959302 HVSMEn0019C13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019C13f, mRNA sequence
Length = 661
Score = 54.0 bits (27), Expect = 1e-005
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| ||||||| ||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 618 acgcttaccctcatngtagcagctcctgactccaattgggttaacattgccccagtaggc 559
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| ||| | |||| ||||||||||||||
Sbjct: 558 ctccgtctgagnatgctcaagaggatcaccata 526
>gb|CA017402.1|CA017402 HV05B15r HV Hordeum vulgare subsp. vulgare cDNA clone HV05B15
5-PRIME, mRNA sequence
Length = 476
Score = 54.0 bits (27), Expect = 1e-005
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatgc 755
|||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 52 gcctgagcaatgaagttactaacaacacggccatcatcaatgc 10
>gb|AL508905.1|AL508905 AL508905 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10C11V 5',
mRNA sequence
Length = 692
Score = 52.0 bits (26), Expect = 5e-005
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 854 ccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacc 913
||||||||||| ||||||||||| || || || || ||||||||||||| | |||| |
Sbjct: 614 ccctcatcgtagcagctcctgactccaattgggttaccattgccccagtaggcctccgtc 555
Query: 914 tgcgggtgctggagaggatcaccata 939
|| || |||| ||||||||||||||
Sbjct: 554 tgaggatgctcaagaggatcaccata 529
>gb|BF258305.2|BF258305 HVSMEf0015F24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015F24f, mRNA sequence
Length = 745
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 153 gcctgagcaatgaagttactaacaacacggccatcatcaatg 112
>gb|BF254210.3|BF254210 HVSMEf0003F07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003F07f, mRNA sequence
Length = 828
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 192 gcctgagcaatgaagttactaacaacacggccatcatcaatg 151
Score = 44.1 bits (22), Expect = 0.013
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgac 876
|||||| ||||||||||| |||||||||||
Sbjct: 58 acgcttaccctcatcgtagcagctcctgac 29
>gb|AV917603.1|AV917603 AV917603 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j24 3', mRNA sequence
Length = 682
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 636 gcctgagcaatgaagttactaacaacacggccatcatcaatg 677
>gb|AV918871.1|AV918871 AV918871 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i15 3', mRNA sequence
Length = 630
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 583 gcctgagcaatgaagttactaacaacacggccatcatcaatg 624
>gb|AV919076.1|AV919076 AV919076 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4f20 3', mRNA sequence
Length = 594
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatg 587
>gb|AV919156.1|AV919156 AV919156 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m06 3', mRNA sequence
Length = 721
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 546 gcctgagcaatgaagttactaacaacacggccatcatcaatg 587
Score = 44.1 bits (22), Expect = 0.013
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 847 acgcttgccctcatcgtaacagctcctgac 876
|||||| ||||||||||| |||||||||||
Sbjct: 680 acgcttaccctcatcgtagcagctcctgac 709
>gb|AV919513.1|AV919513 AV919513 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6f24 3', mRNA sequence
Length = 658
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 611 gcctgagcaatgaagttactaacaacacggccatcatcaatg 652
>gb|AV919679.1|AV919679 AV919679 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7b24 3', mRNA sequence
Length = 628
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 584 gcctgagcaatgaagttactaacaacacggccatcatcaatg 625
>gb|AV921216.1|AV921216 AV921216 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1h02 3', mRNA sequence
Length = 628
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 582 gcctgagcaatgaagttactaacaacacggccatcatcaatg 623
>gb|AV921718.1|AV921718 AV921718 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12h18 3', mRNA sequence
Length = 626
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatg 529
>gb|BJ463352.1|BJ463352 BJ463352 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27b23 5', mRNA sequence
Length = 635
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 180 gcctgagcaatgaagttactaacaacacggccatcatcaatg 139
Score = 36.2 bits (18), Expect = 3.2
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcc 872
|||||| ||||||||||| |||||||
Sbjct: 46 acgcttaccctcatcgtagcagctcc 21
>gb|BJ463970.1|BJ463970 BJ463970 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31e18 5', mRNA sequence
Length = 623
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 165 gcctgagcaatgaagttactaacaacacggccatcatcaatg 124
>gb|BJ466237.1|BJ466237 BJ466237 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31e18 3', mRNA sequence
Length = 628
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 583 gcctgagcaatgaagttactaacaacacggccatcatcaatg 624
>gb|BJ466302.1|BJ466302 BJ466302 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31i13 3', mRNA sequence
Length = 582
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 508 gcctgagcaatgaagttactaacaacacggccatcatcaatg 549
>gb|BJ467706.1|BJ467706 BJ467706 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i05 3', mRNA sequence
Length = 683
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 637 gcctgagcaatgaagttactaacaacacggccatcatcaatg 678
>gb|BJ467865.1|BJ467865 BJ467865 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30b17 3', mRNA sequence
Length = 630
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 584 gcctgagcaatgaagttactaacaacacggccatcatcaatg 625
>gb|BQ658243.1|BQ658243 HB09P05w BC Hordeum vulgare subsp. vulgare cDNA clone HB09P05
3-PRIME, mRNA sequence
Length = 665
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 539 gcctgagcaatgaagttactaacaacacggccatcatcaatg 580
>gb|BQ658402.1|BQ658402 HB09E05w BC Hordeum vulgare subsp. vulgare cDNA clone HB09E05
3-PRIME, mRNA sequence
Length = 660
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 616 gcctgagcaatgaagttactaacaacacggccatcatcaatg 657
>gb|BQ763954.1|BQ763954 EBro03_SQ005_J20_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_J20 5', mRNA sequence
Length = 622
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 46 gcctgagcaatgaagttactaacaacacggccatcatcaatg 5
>gb|BQ767952.1|BQ767952 EBro08_SQ010_E07_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_E07 5', mRNA sequence
Length = 605
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 124 gcctgagcaatgaagttactaacaacacggccatcatcaatg 83
>gb|BF261472.2|BF261472 HV_CEa0001G01f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001G01f, mRNA sequence
Length = 843
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 893 ttgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggta 952
||||||||||| ||||| ||||| ||||||||||| || || || || ||||| |||||
Sbjct: 798 ttgccccagtaggtctcgacctgggggtgctggagtgggtcgccgtaaacctcgctggtg 739
Query: 953 ctggt 957
|||||
Sbjct: 738 ctggt 734
>gb|CD662339.1|CD662339 UCRHV18_01dc12_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_01dc12, mRNA sequence
Length = 231
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 392 accatgaggggaaggccctcacgcagggggatcttcggttcccacccga 440
||||||||||| ||||| ||||| |||| |||||| || ||||||||||
Sbjct: 170 accatgagggggaggccgtcacgaagggcgatcttgggctcccacccga 218
>gb|AL505043.1|AL505043 AL505043 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07D11V 5', mRNA sequence
Length = 673
Score = 48.1 bits (24), Expect = 8e-004
Identities = 76/92 (82%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 849 gcttgccctcatcgtaacagctcctgac-accgatgggattgacattgccccagtaagtc 907
|||| ||||||||||| ||||||||||| || || || || |||||||||||||| | |
Sbjct: 630 gcttaccctcatcgtagcagctcctgactcccaattgggttaacattgccccagtaggcc 571
Query: 908 tccacctgcgggtgctggagaggatcaccata 939
||| ||| || |||| ||||||||||||||
Sbjct: 570 tccgtctgaggatgctcaagaggatcaccata 539
>gb|BI959520.1|BI959520 HVSMEn0020A11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020A11f, mRNA sequence
Length = 678
Score = 46.1 bits (23), Expect = 0.003
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 854 ccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacc 913
||||||| ||| ||||||||||| || || || || ||||||||||||| | |||| |
Sbjct: 607 ccctcatngtagcagctcctgactccaattgggttaccattgccccagtaggcctccgtc 548
Query: 914 tgcgggtgctggagaggatcaccata 939
|| || |||| ||||||||||||||
Sbjct: 547 tgaggatgctcaagaggatcaccata 522
>gb|BI960675.1|BI960675 HVSMEn0025M06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025M06f, mRNA sequence
Length = 666
Score = 46.1 bits (23), Expect = 0.003
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 854 ccctcatcgtaacagctcctgacaccga-tgggattgacattgccccagta 903
||||||||||| ||||||||||| || | |||| || ||||||||||||||
Sbjct: 610 ccctcatcgtagcagctcctgactcccattgggtttaacattgccccagta 560
>gb|AV918957.1|AV918957 AV918957 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22n04 3', mRNA sequence
Length = 671
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatc 747
|||||||||| |||||||| ||||||||||||||
Sbjct: 637 gcctgagcaatgaagttactaacaacacggccatc 671
>gb|AV920629.1|AV920629 AV920629 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14p07 3', mRNA sequence
Length = 694
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatc 747
|||||||||| |||||||| ||||||||||||||
Sbjct: 648 gcctgagcaatgaagttactaacaacacggccatc 682
>gb|AJ462401.1|AJ462401 AJ462401 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200055F04F1, mRNA sequence
Length = 240
Score = 44.1 bits (22), Expect = 0.013
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggcc 408
||||||||||||||||| |||||||||| ||||||||| || |||||
Sbjct: 97 tggtcgccgaagatgcgggtgcggaagtcctggaccatgagcgggaggcc 48
>gb|BM101485.2|BM101485 EBpi01_SQ003_P22_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_P22 5', mRNA sequence
Length = 615
Score = 44.1 bits (22), Expect = 0.013
Identities = 75/93 (80%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| || |||| ||| ||||||||||| || || || || |||||||||||||| |
Sbjct: 513 acgcttaccttcatngtagcagctcctgactccaattgggttaacattgccccagtaggc 454
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
||| ||| || |||| ||||||||||||||
Sbjct: 453 ctctgtctgaggatgctcaagaggatcaccata 421
>gb|BI958511.1|BI958511 HVSMEn0015G01f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015G01f, mRNA sequence
Length = 612
Score = 42.1 bits (21), Expect = 0.051
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 855 cctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||||||| ||||||||||| || || || || ||||||||||||||
Sbjct: 612 cctcatcgtaccagctcctgactccaattgg-ttaacattgccccagta 565
>gb|BI959986.1|BI959986 HVSMEn0022L24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022L24f, mRNA sequence
Length = 723
Score = 42.1 bits (21), Expect = 0.051
Identities = 75/93 (80%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagt 906
|||||| || |||||||| |||||| |||| || || || || |||||||||||||| |
Sbjct: 686 acgcttaccgtcatcgtagcagctcttgactccaattgggttaacattgccccagtaggc 627
Query: 907 ctccacctgcgggtgctggagaggatcaccata 939
|||| || || |||| ||||||||||||||
Sbjct: 626 ctccgtgtgaggatgctcaagaggatcaccata 594
>gb|AV936421.1|AV936421 AV936421 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11e02 3', mRNA sequence
Length = 647
Score = 42.1 bits (21), Expect = 0.051
Identities = 130/165 (78%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
|||||||| || |||| ||||||| ||||| || | |||||||||||| ||||||||
Sbjct: 462 gggtcgattgtttccttcacaacctctgcaagttccaacatggtgaactctccagggttt 521
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| || || | ||| || | |||||||| ||||| || ||||||||
Sbjct: 522 cctagattgaaagggccaatatgatcactctccatcagagccatcaatccagcaaccaga 581
Query: 644 tcagaaacatattggaaac-tcctggtttgctttccatcaccata 687
||||||||||| || |||| | | ||||| ||||||||||||||
Sbjct: 582 tcagaaacatactgaaaactttcgagtttgttttccatcaccata 626
>gb|BF255229.2|BF255229 HVSMEf0006E21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0006E21f, mRNA sequence
Length = 597
Score = 40.1 bits (20), Expect = 0.20
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 980 ctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|||||||| | |||||||||||||| ||||||| ||||| ||||||
Sbjct: 498 ctctttgcaagtccgagcatgttcaaggtcccaatgacattcgtcttg 451
>gb|AV920933.1|AV920933 AV920933 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16c09 3', mRNA sequence
Length = 606
Score = 40.1 bits (20), Expect = 0.20
Identities = 110/140 (78%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
|||||||| || |||| ||||||| ||||| || | |||||||||||| ||||||||
Sbjct: 463 gggtcgattgtttccttcacaacctctgcaagttccaacatggtgaactctccagggttt 522
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| || || | ||| || | |||||||| ||||| || ||||||||
Sbjct: 523 cctagattgaaagggccaatatgatcactctccatcagagccatcaatccagcaaccaga 582
Query: 644 tcagaaacatattggaaact 663
||||||||||| || |||||
Sbjct: 583 tcagaaacatactgaaaact 602
>gb|BG343364.1|BG343364 HVSMEg0005I18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005I18f, mRNA sequence
Length = 998
Score = 38.2 bits (19), Expect = 0.80
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1185 acagtaagcgaagttgctt 1203
|||||||||||||||||||
Sbjct: 816 acagtaagcgaagttgctt 798
>gb|AV918391.1|AV918391 AV918391 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20o08 3', mRNA sequence
Length = 699
Score = 38.2 bits (19), Expect = 0.80
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 725 aagttactgacaacacggccatc 747
|||||||| ||||||||||||||
Sbjct: 666 aagttactaacaacacggccatc 688
>gb|CK124463.1|CK124463 BES1824109d17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D179 5-PRIME, mRNA sequence
Length = 694
Score = 38.2 bits (19), Expect = 0.80
Identities = 85/107 (79%)
Strand = Plus / Minus
Query: 851 ttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctcc 910
||||||||||| || || || || ||||| || ||||| |||| ||||| |||||||||
Sbjct: 657 ttgccctcatcatagcaacttctaacacctataggattaacatgcccccaataagtctcc 598
Query: 911 acctgcgggtgctggagaggatcaccatagacctcactggtactggt 957
|||||| |||| || || |||||||| || ||||| || |||||
Sbjct: 597 ttctgcggatgctcaagtgggtcaccataaacttcacttgtgctggt 551
>gb|AL499822.1|AL499822 AL499822 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03J17r 3', mRNA sequence
Length = 561
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 741 ggccatcgtcaatgcaca 758
||||||||||||||||||
Sbjct: 419 ggccatcgtcaatgcaca 402
>gb|AL503719.1|AL503719 AL503719 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03D04T 5', mRNA sequence
Length = 700
Score = 36.2 bits (18), Expect = 3.2
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 890 acattgccccagtaagtctccacctgcgggtgctggagaggatcaccata 939
|||||||||||||| | |||| ||| || |||| ||||||||||||||
Sbjct: 590 acattgccccagtaggcctccgtctgaggatgctcaagaggatcaccata 541
>gb|BG416054.1|BG416054 HVSMEk0009J13f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0009J13f, mRNA sequence
Length = 995
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1253 gaaaattgaaatgcgccc 1270
||||||||||||||||||
Sbjct: 934 gaaaattgaaatgcgccc 951
>gb|AV914111.1|AV914111 AV914111 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m06 5', mRNA sequence
Length = 550
Score = 36.2 bits (18), Expect = 3.2
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 890 acattgccccagtaagtctccacctgcgggtgctggagaggatcaccata 939
|||||||||||||| | |||| ||| || |||| ||||||||||||||
Sbjct: 537 acattgccccagtaggcctccgtctgaggatgctcaagaggatcaccata 488
>gb|BJ464409.1|BJ464409 BJ464409 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34d02 5', mRNA sequence
Length = 584
Score = 36.2 bits (18), Expect = 3.2
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 890 acattgccccagtaagtctccacctgcgggtgctggagaggatcaccata 939
|||||||||||||| | |||| ||| || |||| ||||||||||||||
Sbjct: 566 acattgccccagtaggcctccgtctgaggatgctcaagaggatcaccata 517
>gb|BM377505.2|BM377505 EBem04_SQ003_F10_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_F10 5', mRNA sequence
Length = 594
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 741 ggccatcgtcaatgcaca 758
||||||||||||||||||
Sbjct: 272 ggccatcgtcaatgcaca 289
>gb|BQ762115.1|BQ762115 EBpi01_SQ005_H24_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ005_H24 5', mRNA sequence
Length = 556
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 741 ggccatcgtcaatgcaca 758
||||||||||||||||||
Sbjct: 296 ggccatcgtcaatgcaca 313
>gb|BQ764456.1|BQ764456 EBan01_SQ005_M20 _R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_M20 5', mRNA sequence
Length = 384
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 741 ggccatcgtcaatgcaca 758
||||||||||||||||||
Sbjct: 305 ggccatcgtcaatgcaca 322
>gb|CA017881.1|CA017881 HV06K06r HV Hordeum vulgare subsp. vulgare cDNA clone HV06K06
5-PRIME, mRNA sequence
Length = 500
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 741 ggccatcgtcaatgcaca 758
||||||||||||||||||
Sbjct: 305 ggccatcgtcaatgcaca 322
>gb|CA024332.1|CA024332 HZ49A08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49A08
5-PRIME, mRNA sequence
Length = 620
Score = 36.2 bits (18), Expect = 3.2
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 890 acattgccccagtaagtctccacctgcgggtgctggagaggatcaccata 939
|||||||||||||| | |||| ||| || |||| ||||||||||||||
Sbjct: 567 acattgccccagtaggcctccgtctgaggatgctcaagaggatcaccata 518
>gb|CV063915.1|CV063915 BNEL94f12 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL94f12 5' similar to Unknown Function, mRNA
sequence
Length = 320
Score = 36.2 bits (18), Expect = 3.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 983 tttgctaatccgagcatg 1000
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Sbjct: 105 tttgctaatccgagcatg 122
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 133,319
Number of Sequences: 312970
Number of extensions: 133319
Number of successful extensions: 37380
Number of sequences better than 10.0: 212
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36809
Number of HSP's gapped (non-prelim): 519
length of query: 1475
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1456
effective length of database: 169,188,109
effective search space: 246337886704
effective search space used: 246337886704
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)