BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805320.2.1
(955 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV055505.1|CV055505 BNEL120d4 Barley EST endosperm libra... 319 9e-086
gb|CV061959.1|CV061959 BNEL74g6 Barley EST endosperm librar... 313 6e-084
gb|CV057703.1|CV057703 BNEL2G6 Barley EST endosperm library... 311 2e-083
gb|CV059218.1|CV059218 BNEL45f9 Barley EST endosperm librar... 311 2e-083
gb|CV063088.1|CV063088 BNEL86e2 Barley EST endosperm librar... 311 2e-083
gb|CV063938.1|CV063938 BNEL94h4 Barley EST endosperm librar... 311 2e-083
gb|BE196547.1|BE196547 HVSMEh0092J15f Hordeum vulgare 5-45 ... 309 9e-083
gb|BF630668.2|BF630668 HVSMEb0012M22f Hordeum vulgare seedl... 309 9e-083
gb|BF261068.2|BF261068 HVSMEf0023K20f Hordeum vulgare seedl... 309 9e-083
gb|BI959567.1|BI959567 HVSMEn0020D19f Hordeum vulgare rachi... 309 9e-083
gb|BJ475991.1|BJ475991 BJ475991 K. Sato unpublished cDNA li... 309 9e-083
gb|BJ476005.1|BJ476005 BJ476005 K. Sato unpublished cDNA li... 309 9e-083
gb|CV053685.1|CV053685 BNEL102a5 Barley EST endosperm libra... 309 9e-083
gb|CV053997.1|CV053997 BNEL105f12 Barley EST endosperm libr... 309 9e-083
gb|CV054193.1|CV054193 BNEL107g4 Barley EST endosperm libra... 309 9e-083
gb|CV054937.1|CV054937 BNEL115a1 Barley EST endosperm libra... 309 9e-083
gb|CV058211.1|CV058211 BNEL35e7 Barley EST endosperm librar... 309 9e-083
gb|CV059301.1|CV059301 BNEL46f2 Barley EST endosperm librar... 309 9e-083
gb|CV059709.1|CV059709 BNEL50b10 Barley EST endosperm libra... 309 9e-083
gb|CV059912.1|CV059912 BNEL52c7 Barley EST endosperm librar... 309 9e-083
gb|CV062158.1|CV062158 BNEL77a1 Barley EST endosperm librar... 309 9e-083
gb|CV063130.1|CV063130 BNEL87a1 Barley EST endosperm librar... 309 9e-083
gb|CV063470.1|CV063470 BNEL8F5 Barley EST endosperm library... 309 9e-083
gb|BF258475.2|BF258475 HVSMEf0015N04f Hordeum vulgare seedl... 307 4e-082
gb|CV053732.1|CV053732 BNEL102f1 Barley EST endosperm libra... 307 4e-082
gb|BG415891.1|BG415891 HVSMEk0008M05f Hordeum vulgare testa... 303 6e-081
gb|BG417611.2|BG417611 HVSMEk0018I23f Hordeum vulgare testa... 303 6e-081
gb|CV054968.1|CV054968 BNEL115d1 Barley EST endosperm libra... 303 6e-081
gb|BF254873.2|BF254873 HVSMEf0005E15f Hordeum vulgare seedl... 297 3e-079
gb|BF263338.3|BF263338 HV_CEa0006H19f Hordeum vulgare seedl... 297 3e-079
gb|BE216259.3|BE216259 HV_CEb0010A09f Hordeum vulgare seedl... 297 3e-079
gb|AL511015.1|AL511015 AL511015 Hordeum vulgare Barke devel... 295 1e-078
gb|BJ475862.1|BJ475862 BJ475862 K. Sato unpublished cDNA li... 295 1e-078
gb|BQ660433.1|BQ660433 HI02I10u HI Hordeum vulgare subsp. v... 295 1e-078
gb|BU976492.1|BU976492 HA03M19u HA Hordeum vulgare subsp. v... 295 1e-078
gb|CB874594.1|CB874594 HX05L20w HX Hordeum vulgare subsp. v... 295 1e-078
gb|CB882663.1|CB882663 HL02I04w HL Hordeum vulgare subsp. v... 295 1e-078
gb|AL503228.1|AL503228 AL503228 Hordeum vulgare Barke roots... 293 5e-078
gb|AL503322.1|AL503322 AL503322 Hordeum vulgare Barke roots... 293 5e-078
gb|AL507741.1|AL507741 AL507741 Hordeum vulgare Barke devel... 293 5e-078
gb|BF266381.2|BF266381 HV_CEa0014P19f Hordeum vulgare seedl... 293 5e-078
gb|BJ471141.1|BJ471141 BJ471141 K. Sato unpublished cDNA li... 293 5e-078
gb|BJ473227.1|BJ473227 BJ473227 K. Sato unpublished cDNA li... 293 5e-078
gb|BQ460308.1|BQ460308 HA06K06r HA Hordeum vulgare subsp. v... 293 5e-078
gb|BQ460647.1|BQ460647 HA06F14r HA Hordeum vulgare subsp. v... 293 5e-078
gb|BQ462948.1|BQ462948 HI02I10r HI Hordeum vulgare subsp. v... 293 5e-078
gb|BQ470259.1|BQ470259 HX02E23r HX Hordeum vulgare subsp. v... 293 5e-078
gb|BQ665146.1|BQ665146 HX02E23u HX Hordeum vulgare subsp. v... 293 5e-078
gb|BQ665559.1|BQ665559 HX04C11u HX Hordeum vulgare subsp. v... 293 5e-078
gb|BQ665771.1|BQ665771 HZ01B03u HZ Hordeum vulgare subsp. v... 293 5e-078
gb|BM377951.2|BM377951 EBem04_SQ004_L03_R embryo, 12 DPA, n... 293 5e-078
gb|BI776662.2|BI776662 EBpi07_SQ001_F02_R pistil, 12 DPA, n... 293 5e-078
gb|BQ767540.1|BQ767540 EBro08_SQ009_N03_R root, 3 week, dro... 293 5e-078
gb|BU976021.1|BU976021 HA03A02u HA Hordeum vulgare subsp. v... 293 5e-078
gb|BU982445.1|BU982445 HA26J06r HA Hordeum vulgare subsp. v... 293 5e-078
gb|BU986860.1|BU986860 HF13B22r HF Hordeum vulgare subsp. v... 293 5e-078
gb|BU994404.1|BU994404 HM06P09r HM Hordeum vulgare subsp. v... 293 5e-078
gb|CA000551.1|CA000551 HS07L09u HS Hordeum vulgare subsp. v... 293 5e-078
gb|CA011032.1|CA011032 HT07D17u HT Hordeum vulgare subsp. v... 293 5e-078
gb|CA020381.1|CA020381 HZ36C03r HZ Hordeum vulgare subsp. v... 293 5e-078
gb|CA021088.1|CA021088 HZ39B05r HZ Hordeum vulgare subsp. v... 293 5e-078
gb|CA022107.1|CA022107 HZ42C23r HZ Hordeum vulgare subsp. v... 293 5e-078
gb|CA029974.1|CA029974 HX05L20r HX Hordeum vulgare subsp. v... 293 5e-078
gb|CA030027.1|CA030027 HX05O01r HX Hordeum vulgare subsp. v... 293 5e-078
gb|CA030454.1|CA030454 HX07B22r HX Hordeum vulgare subsp. v... 293 5e-078
gb|CA031179.1|CA031179 HX09D19r HX Hordeum vulgare subsp. v... 293 5e-078
gb|CA032352.1|CA032352 HX12M06r HX Hordeum vulgare subsp. v... 293 5e-078
gb|CA032537.1|CA032537 HX13F10r HX Hordeum vulgare subsp. v... 293 5e-078
gb|CB874578.1|CB874578 HX05L04w HX Hordeum vulgare subsp. v... 293 5e-078
gb|CB874637.1|CB874637 HX05O01w HX Hordeum vulgare subsp. v... 293 5e-078
gb|CB874799.1|CB874799 HX06F16w HX Hordeum vulgare subsp. v... 293 5e-078
gb|CB875746.1|CB875746 HX09D19w HX Hordeum vulgare subsp. v... 293 5e-078
gb|CB876591.1|CB876591 HX11M06w HX Hordeum vulgare subsp. v... 293 5e-078
gb|CB876888.1|CB876888 HP02M11T HP Hordeum vulgare subsp. v... 293 5e-078
gb|CB879574.1|CB879574 HP02M11w HP Hordeum vulgare subsp. v... 293 5e-078
gb|CB880575.1|CB880575 HM06P09w HM Hordeum vulgare subsp. v... 293 5e-078
gb|CK122934.1|CK122934 BES1824101e20 BES1824 Hordeum vulgar... 293 5e-078
emb|AJ277096.1|HVU277096 Hordeum vulgare mRNA for putative ... 293 5e-078
gb|BU994865.1|BU994865 HM08H02r HM Hordeum vulgare subsp. v... 291 2e-077
gb|CA022203.1|CA022203 HZ42H06r HZ Hordeum vulgare subsp. v... 291 2e-077
gb|CA024630.1|CA024630 HZ49N16r HZ Hordeum vulgare subsp. v... 291 2e-077
gb|BU977013.1|BU977013 HA10L02u HA Hordeum vulgare subsp. v... 287 3e-076
gb|AL508180.1|AL508180 AL508180 Hordeum vulgare Barke devel... 285 1e-075
gb|CA008616.1|CA008616 HU11I16r HU Hordeum vulgare subsp. v... 285 1e-075
gb|BQ767886.1|BQ767886 EBro08_SQ010_I04_R root, 3 week, dro... 283 5e-075
gb|BJ471999.1|BJ471999 BJ471999 K. Sato unpublished cDNA li... 281 2e-074
gb|CA013042.1|CA013042 HT07D17r HT Hordeum vulgare subsp. v... 281 2e-074
gb|BQ471049.1|BQ471049 HX04N02r HX Hordeum vulgare subsp. v... 280 8e-074
gb|CA005218.1|CA005218 HU11I16u HU Hordeum vulgare subsp. v... 280 8e-074
gb|BQ740141.1|BQ740141 HC109B01 HC Hordeum vulgare subsp. v... 278 3e-073
gb|BG418624.1|BG418624 HVSMEk0023I22f Hordeum vulgare testa... 276 1e-072
gb|BJ471017.1|BJ471017 BJ471017 K. Sato unpublished cDNA li... 276 1e-072
gb|BJ477406.1|BJ477406 BJ477406 K. Sato unpublished cDNA li... 276 1e-072
gb|CV053585.1|CV053585 BNEL100h5 Barley EST endosperm libra... 276 1e-072
gb|CV053696.1|CV053696 BNEL102b5 Barley EST endosperm libra... 276 1e-072
gb|CV055391.1|CV055391 BNEL11B1 Barley EST endosperm librar... 276 1e-072
gb|CV056514.1|CV056514 BNEL18F2 Barley EST endosperm librar... 276 1e-072
gb|CV058213.1|CV058213 BNEL35e9 Barley EST endosperm librar... 276 1e-072
gb|CV059221.1|CV059221 BNEL45g11 Barley EST endosperm libra... 276 1e-072
gb|BM816747.1|BM816747 HB02E01_T3.ab1 HB Hordeum vulgare su... 274 5e-072
gb|BG415438.1|BG415438 HVSMEk0006I01f Hordeum vulgare testa... 268 3e-070
gb|AV929827.1|AV929827 AV929827 K. Sato unpublished cDNA li... 268 3e-070
gb|AV929922.1|AV929922 AV929922 K. Sato unpublished cDNA li... 268 3e-070
gb|AV930259.1|AV930259 AV930259 K. Sato unpublished cDNA li... 268 3e-070
gb|BM444112.1|BM444112 EBem09_SQ004_D05_R embryo, 1 Day ger... 268 3e-070
gb|AJ436478.1|AJ436478 AJ436478 S00002 Hordeum vulgare subs... 268 3e-070
gb|AJ463411.1|AJ463411 AJ463411 S00002 Hordeum vulgare subs... 268 3e-070
gb|BQ471288.1|BQ471288 HV02A01r HV Hordeum vulgare subsp. v... 268 3e-070
gb|BQ656595.1|BQ656595 HA02O05u HA Hordeum vulgare subsp. v... 268 3e-070
gb|BQ658321.1|BQ658321 HB09K03w BC Hordeum vulgare subsp. v... 268 3e-070
gb|BM099983.2|BM099983 EBes01_SQ004_N07_R embryo sac, 4-6 D... 268 3e-070
gb|BU987910.1|BU987910 HF16B20r HF Hordeum vulgare subsp. v... 268 3e-070
gb|CA011219.1|CA011219 HT06H21u HT Hordeum vulgare subsp. v... 268 3e-070
gb|CA023120.1|CA023120 HZ45E17r HZ Hordeum vulgare subsp. v... 268 3e-070
gb|CV058832.1|CV058832 BNEL41e11 Barley EST endosperm libra... 268 3e-070
gb|CA032663.1|CA032663 HX13N05r HX Hordeum vulgare subsp. v... 266 1e-069
gb|BM374720.1|BM374720 EBma05_SQ002_J16_R maternal, 12 DPA,... 260 8e-068
gb|AL507256.1|AL507256 AL507256 Hordeum vulgare Barke devel... 258 3e-067
gb|BF625618.2|BF625618 HVSMEa0013A04f Hordeum vulgare seedl... 254 5e-066
gb|BF260271.1|BF260271 HVSMEf0021I23f Hordeum vulgare seedl... 254 5e-066
gb|BF619587.2|BF619587 HVSMEc0004I07f Hordeum vulgare seedl... 254 5e-066
gb|BI956368.1|BI956368 HVSMEn0002O17f Hordeum vulgare rachi... 254 5e-066
gb|BF263315.2|BF263315 HV_CEa0006G20f Hordeum vulgare seedl... 254 5e-066
gb|BF264565.2|BF264565 HV_CEa0009M09f Hordeum vulgare seedl... 254 5e-066
gb|BF619394.2|BF619394 HVSMEc0003B12f Hordeum vulgare seedl... 254 5e-066
gb|BF259989.3|BF259989 HVSMEf0020M23f Hordeum vulgare seedl... 254 5e-066
gb|BE196141.3|BE196141 HVSMEh0091H15f Hordeum vulgare 5-45 ... 254 5e-066
gb|BE601523.3|BE601523 HVSMEh0097O11f Hordeum vulgare 5-45 ... 254 5e-066
gb|BG368727.2|BG368727 HVSMEi0020G11f Hordeum vulgare 20 DA... 254 5e-066
gb|BG368811.2|BG368811 HVSMEi0020M10f Hordeum vulgare 20 DA... 254 5e-066
gb|BQ463476.1|BQ463476 HI05G07r HI Hordeum vulgare subsp. v... 254 5e-066
gb|BQ469524.1|BQ469524 HZ01B03r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|BQ470610.1|BQ470610 HX03H21r HX Hordeum vulgare subsp. v... 254 5e-066
gb|BQ470825.1|BQ470825 HX04C11r HX Hordeum vulgare subsp. v... 254 5e-066
gb|BQ757835.1|BQ757835 EBem10_SQ005_G02_R embryo, 2 Day ger... 254 5e-066
gb|BU968732.1|BU968732 HB08G18r BC Hordeum vulgare subsp. v... 254 5e-066
gb|BU970544.1|BU970544 HB14P12r BC Hordeum vulgare subsp. v... 254 5e-066
gb|BU972290.1|BU972290 HB21D16r BC Hordeum vulgare subsp. v... 254 5e-066
gb|BU976491.1|BU976491 HA03M19r HA Hordeum vulgare subsp. v... 254 5e-066
gb|BU977012.1|BU977012 HA10L02r HA Hordeum vulgare subsp. v... 254 5e-066
gb|BU979503.1|BU979503 HA16G01r HA Hordeum vulgare subsp. v... 254 5e-066
gb|BU980095.1|BU980095 HA18I17r HA Hordeum vulgare subsp. v... 254 5e-066
gb|BU981279.1|BU981279 HA23C10r HA Hordeum vulgare subsp. v... 254 5e-066
gb|BU981456.1|BU981456 HA23K20r HA Hordeum vulgare subsp. v... 254 5e-066
gb|BU982283.1|BU982283 HA26A23r HA Hordeum vulgare subsp. v... 254 5e-066
gb|BU983962.1|BU983962 HA31J05r HA Hordeum vulgare subsp. v... 254 5e-066
gb|BU998227.1|BU998227 HI10G08r HI Hordeum vulgare subsp. v... 254 5e-066
gb|CA003485.1|CA003485 HS14J24r HS Hordeum vulgare subsp. v... 254 5e-066
gb|CA007320.1|CA007320 HU07I17r HU Hordeum vulgare subsp. v... 254 5e-066
gb|CA012326.1|CA012326 HT05B21r HT Hordeum vulgare subsp. v... 254 5e-066
gb|CA018273.1|CA018273 HV08C06r HV Hordeum vulgare subsp. v... 254 5e-066
gb|CA020848.1|CA020848 HZ38A18r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA021503.1|CA021503 HZ40E16r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA022503.1|CA022503 HZ43G20r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA022633.1|CA022633 HZ43O12r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA022878.1|CA022878 HZ44J20r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA023021.1|CA023021 HZ45A05r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA023408.1|CA023408 HZ46C13r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA023467.1|CA023467 HZ46F10r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA026627.1|CA026627 HZ56H10r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA026755.1|CA026755 HZ56N22r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA027395.1|CA027395 HZ58M14r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA027517.1|CA027517 HZ59D01r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA029078.1|CA029078 HZ64C07r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA029155.1|CA029155 HZ64G01r HZ Hordeum vulgare subsp. v... 254 5e-066
gb|CA029958.1|CA029958 HX05L04r HX Hordeum vulgare subsp. v... 254 5e-066
gb|CA030193.1|CA030193 HX06F16r HX Hordeum vulgare subsp. v... 254 5e-066
gb|BQ656695.1|BQ656695 HA02I11u HA Hordeum vulgare subsp. v... 250 7e-065
gb|BQ657950.1|BQ657950 HA06F09u HA Hordeum vulgare subsp. v... 248 3e-064
gb|CA001453.1|CA001453 HS17P15u HS Hordeum vulgare subsp. v... 248 3e-064
gb|BQ665714.1|BQ665714 HX04N02u HX Hordeum vulgare subsp. v... 246 1e-063
gb|BU981245.1|BU981245 HA23A19r HA Hordeum vulgare subsp. v... 246 1e-063
gb|CV058003.1|CV058003 BNEL33c6 Barley EST endosperm librar... 246 1e-063
gb|AV925121.1|AV925121 AV925121 K. Sato unpublished cDNA li... 244 4e-063
gb|BU977828.1|BU977828 HA12B21u HA Hordeum vulgare subsp. v... 244 4e-063
gb|BI954703.1|BI954703 HVSMEm0019F24f Hordeum vulgare green... 242 2e-062
gb|BI946965.1|BI946965 HVSMEl0003A09f Hordeum vulgare spike... 240 7e-062
gb|BI953314.1|BI953314 HVSMEm0012C08f Hordeum vulgare green... 240 7e-062
gb|BU979961.1|BU979961 HA17P11r HA Hordeum vulgare subsp. v... 240 7e-062
gb|BE215104.2|BE215104 HV_CEb0005N05f Hordeum vulgare seedl... 238 3e-061
gb|BE519961.2|BE519961 HV_CEb0021N23f Hordeum vulgare seedl... 238 3e-061
gb|CV060154.1|CV060154 BNEL55a4 Barley EST endosperm librar... 238 3e-061
gb|BQ657952.1|BQ657952 HA06F14u HA Hordeum vulgare subsp. v... 234 4e-060
gb|BU974699.1|BU974699 HB28N02r BC Hordeum vulgare subsp. v... 234 4e-060
gb|CA021861.1|CA021861 HZ41F24r HZ Hordeum vulgare subsp. v... 234 4e-060
gb|CA027732.1|CA027732 HZ59N15r HZ Hordeum vulgare subsp. v... 234 4e-060
gb|CA012136.1|CA012136 HT04I21r HT Hordeum vulgare subsp. v... 232 2e-059
gb|BU974627.1|BU974627 HB28J04r BC Hordeum vulgare subsp. v... 226 1e-057
gb|AV924829.1|AV924829 AV924829 K. Sato unpublished cDNA li... 222 2e-056
gb|BU983237.1|BU983237 HA28P24r HA Hordeum vulgare subsp. v... 222 2e-056
gb|AW983540.3|AW983540 HVSMEg0010P19f Hordeum vulgare pre-a... 214 4e-054
gb|BQ458910.1|BQ458910 HA02O05r HA Hordeum vulgare subsp. v... 214 4e-054
gb|BU977827.1|BU977827 HA12B21r HA Hordeum vulgare subsp. v... 214 4e-054
gb|BU983351.1|BU983351 HA29G23r HA Hordeum vulgare subsp. v... 214 4e-054
gb|CA012804.1|CA012804 HT06H21r HT Hordeum vulgare subsp. v... 214 4e-054
gb|BM440979.1|BM440979 EBed02_SQ002_B04_R endosperm, 8 DPA,... 210 6e-053
gb|AL500720.1|AL500720 AL500720 Hordeum vulgare Barke roots... 208 2e-052
gb|AV924734.1|AV924734 AV924734 K. Sato unpublished cDNA li... 206 1e-051
gb|CA002504.1|CA002504 HS07L09r HS Hordeum vulgare subsp. v... 206 1e-051
gb|AL500601.1|AL500601 AL500601 Hordeum vulgare Barke roots... 198 2e-049
gb|CA030650.1|CA030650 HX07L08r HX Hordeum vulgare subsp. v... 198 2e-049
gb|BI777363.1|BI777363 EBro03_SQ003_A15_R root, 3 week, wat... 194 4e-048
gb|BF627673.2|BF627673 HVSMEb0005H22f Hordeum vulgare seedl... 190 6e-047
gb|BQ755566.1|BQ755566 EBed07_SQ003_A03_R endosperm, 28 DPA... 188 2e-046
gb|CV063625.1|CV063625 BNEL91d4 Barley EST endosperm librar... 186 9e-046
emb|AJ400725.1|HVU400725 Hordeum vulgare partial mRNA for p... 186 9e-046
gb|CV064243.1|CV064243 BNEL99f9 Barley EST endosperm librar... 184 4e-045
gb|AL504570.1|AL504570 AL504570 Hordeum vulgare Barke roots... 180 6e-044
gb|BQ460593.1|BQ460593 HA06I03r HA Hordeum vulgare subsp. v... 174 3e-042
gb|BQ469375.1|BQ469375 HM04G17r HM Hordeum vulgare subsp. v... 174 3e-042
gb|BQ657912.1|BQ657912 HA06I03u HA Hordeum vulgare subsp. v... 174 3e-042
gb|BQ661623.1|BQ661623 HM04G17u HM Hordeum vulgare subsp. v... 174 3e-042
gb|BQ767692.1|BQ767692 EBro08_SQ009_H16_R root, 3 week, dro... 174 3e-042
gb|BU997239.1|BU997239 HI07G01r HI Hordeum vulgare subsp. v... 174 3e-042
gb|CB858525.1|CB858525 HI07G01w HI Hordeum vulgare subsp. v... 174 3e-042
gb|CA015835.1|CA015835 HV12B08u HV Hordeum vulgare subsp. v... 168 2e-040
gb|BF628564.2|BF628564 HVSMEb0006J05f Hordeum vulgare seedl... 165 3e-039
gb|BI776646.2|BI776646 EBpi07_SQ001_E06_R pistil, 12 DPA, n... 165 3e-039
gb|BQ472588.1|BQ472588 HB09B12T BC Hordeum vulgare subsp. v... 159 2e-037
gb|BU968299.1|BU968299 HB07B12r BC Hordeum vulgare subsp. v... 159 2e-037
gb|CA013933.1|CA013933 HT09O13r HT Hordeum vulgare subsp. v... 159 2e-037
gb|AL511423.1|AL511423 AL511423 Hordeum vulgare Barke devel... 155 3e-036
gb|BQ759209.1|BQ759209 EBma08_SQ003_O24_R maternal, 28 DPA,... 155 3e-036
gb|BF265305.3|BF265305 HV_CEa0011J18f Hordeum vulgare seedl... 151 5e-035
gb|BM368290.2|BM368290 EBed01_SQ002_L12_R endosperm, 6 DPA,... 151 5e-035
gb|BU983250.1|BU983250 HA29B04r HA Hordeum vulgare subsp. v... 143 1e-032
gb|CA029674.1|CA029674 HZ65O04r HZ Hordeum vulgare subsp. v... 141 5e-032
gb|BU978425.1|BU978425 HA13D19r HA Hordeum vulgare subsp. v... 129 2e-028
gb|CV057098.1|CV057098 BNEL24a12 Barley EST endosperm libra... 119 2e-025
gb|CV060818.1|CV060818 BNEL61e8 Barley EST endosperm librar... 119 2e-025
gb|CV055395.1|CV055395 BNEL11B2 Barley EST endosperm librar... 113 1e-023
gb|BF258368.3|BF258368 HVSMEf0015I15f Hordeum vulgare seedl... 109 2e-022
gb|CA010483.1|CA010483 HT09O13u HT Hordeum vulgare subsp. v... 103 1e-020
gb|CA028890.1|CA028890 HZ63I18r HZ Hordeum vulgare subsp. v... 103 1e-020
gb|CA028114.1|CA028114 HZ61A15r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|BQ759211.1|BQ759211 EBma08_SQ003_P23_R maternal, 28 DPA,... 98 6e-019
gb|CV059663.1|CV059663 BNEL4F1 Barley EST endosperm library... 98 6e-019
gb|BQ658448.1|BQ658448 HB09B12w BC Hordeum vulgare subsp. v... 96 3e-018
gb|BQ760186.1|BQ760186 EBpi07_SQ003_O10_R pistil, 12 DPA, n... 94 1e-017
gb|CB880989.1|CB880989 HM08H02w HM Hordeum vulgare subsp. v... 76 2e-012
gb|BQ460653.1|BQ460653 HA06F09r HA Hordeum vulgare subsp. v... 74 9e-012
gb|CA026606.1|CA026606 HZ56G09r HZ Hordeum vulgare subsp. v... 70 1e-010
gb|CA027072.1|CA027072 HZ57M24r HZ Hordeum vulgare subsp. v... 70 1e-010
gb|CB875243.1|CB875243 HX07L08w HX Hordeum vulgare subsp. v... 70 1e-010
gb|CV054310.1|CV054310 BNEL109b11 Barley EST endosperm libr... 70 1e-010
gb|CB875748.1|CB875748 HX09D21w HX Hordeum vulgare subsp. v... 64 9e-009
gb|CB875755.1|CB875755 HX09E13w HX Hordeum vulgare subsp. v... 64 9e-009
gb|CK125472.1|CK125472 BES1824108k03 BES1824 Hordeum vulgar... 60 1e-007
gb|CV057695.1|CV057695 BNEL2G1 Barley EST endosperm library... 46 0.002
gb|BF257796.3|BF257796 HVSMEf0013O07f Hordeum vulgare seedl... 42 0.033
gb|BG416377.2|BG416377 HVSMEk0011M22f Hordeum vulgare testa... 42 0.033
gb|BQ470970.1|BQ470970 HX04J10r HX Hordeum vulgare subsp. v... 42 0.033
gb|CA017461.1|CA017461 HV05E10r HV Hordeum vulgare subsp. v... 42 0.033
gb|CA033012.1|CA033012 HX14N17r HX Hordeum vulgare subsp. v... 42 0.033
gb|BI956703.1|BI956703 HVSMEn0004N19f Hordeum vulgare rachi... 40 0.13
gb|BI957620.1|BI957620 HVSMEn0010G12f Hordeum vulgare rachi... 40 0.13
gb|BQ766120.1|BQ766120 EBro08_SQ005_I01_R root, 3 week, dro... 40 0.13
gb|CA012285.1|CA012285 HT04P19r HT Hordeum vulgare subsp. v... 40 0.13
gb|CA025664.1|CA025664 HZ52N09r HZ Hordeum vulgare subsp. v... 40 0.13
gb|CB882550.1|CB882550 HL02C23w HL Hordeum vulgare subsp. v... 40 0.13
>gb|CV055505.1|CV055505 BNEL120d4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL120d4 5' similar to putative
kinetochore protein, mRNA sequence
Length = 721
Score = 319 bits (161), Expect = 9e-086
Identities = 232/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 292 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 351
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 352 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 411
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 412 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 471
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 472 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 531
Query: 578 tcaccggaggcggcgg 593
||| ||||||| ||||
Sbjct: 532 tcancggaggctgcgg 547
Score = 137 bits (69), Expect = 8e-031
Identities = 96/104 (92%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||| ||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 616 acgtgcttgntgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 675
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggat 771
||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 676 gggatgccgttgtcggcgcagtcgtcctcga-catgtggcggat 718
>gb|CV061959.1|CV061959 BNEL74g6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL74g6 5' similar to skp1 protein,
mRNA sequence
Length = 710
Score = 313 bits (158), Expect = 6e-084
Identities = 231/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 271 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 330
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 331 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 390
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 391 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 450
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 451 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 510
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 511 tcancggnggctgcgg 526
Score = 56.0 bits (28), Expect = 2e-006
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgtt 720
|||||||||||| |||||||||| |||||||| ||||||| | || |||||||
Sbjct: 593 acgtgcttgttg-agtactcgatgaccttggagaggatctngnagntgacgtt 644
>gb|CV057703.1|CV057703 BNEL2G6 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL2G6 5' similar to putative SKP1 protein,
mRNA sequence
Length = 702
Score = 311 bits (157), Expect = 2e-083
Identities = 231/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 223 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 282
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 283 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 342
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 343 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 402
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 403 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 462
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 463 tcancgggggctgcgg 478
Score = 182 bits (92), Expect = 1e-044
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 547 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 606
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||
Sbjct: 607 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgacttcatg 666
Query: 788 gccaccgcctcttccacctcgaact 812
|| ||||||| | ||||| |||||
Sbjct: 667 gcgaccgcctnctncacctngaact 691
>gb|CV059218.1|CV059218 BNEL45f9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL45f9 5' similar to putative
kinetochore protein, mRNA sequence
Length = 636
Score = 311 bits (157), Expect = 2e-083
Identities = 231/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 243 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 302
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 303 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 362
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 363 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 422
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 423 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 482
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 483 tcagcggnggctgcgg 498
Score = 85.7 bits (43), Expect = 2e-015
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||| ||||||||||| | ||
Sbjct: 567 acgtgcttgttgcagtactcgatgaccttggagaggatctttgagttgacgttggngagc 626
Query: 728 gggatgccgt 737
||||||||||
Sbjct: 627 gggatgccgt 636
>gb|CV063088.1|CV063088 BNEL86e2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL86e2 5' similar to putative
kinetochore protein, mRNA sequence
Length = 714
Score = 311 bits (157), Expect = 2e-083
Identities = 231/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 249 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 308
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 309 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 368
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 369 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 428
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 429 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 488
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 489 tcancgggggctgcgg 504
Score = 155 bits (78), Expect = 3e-036
Identities = 112/121 (92%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgtt-aggaag 726
||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 573 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggaag 632
Query: 727 agggatgccgttgtcggcgcagtcatcctcgatcatgtggc-ggatggtctgcgactcca 785
||||||||||||||||||||||| |||||||||||||||| |||| || ||||||||||
Sbjct: 633 cgggatgccgttgtcggcgcagtcgtcctcgatcatgtggcgggattgtntgcgactcca 692
Query: 786 t 786
|
Sbjct: 693 t 693
>gb|CV063938.1|CV063938 BNEL94h4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94h4 5' similar to putative SKP1
protein, mRNA sequence
Length = 636
Score = 311 bits (157), Expect = 2e-083
Identities = 231/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 271 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 330
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 331 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 390
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 391 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 450
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 451 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 510
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 511 tcancgggggctgcgg 526
Score = 67.9 bits (34), Expect = 6e-010
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttg 709
||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 595 acgtgcttgttgcagtactcgatgaccttggagaggatcttg 636
>gb|BE196547.1|BE196547 HVSMEh0092J15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092J15f, mRNA sequence
Length = 934
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 467 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 408
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 407 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 348
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 347 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 288
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 287 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 228
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 227 tcagcgggggctgcgg 212
Score = 204 bits (103), Expect = 4e-051
Identities = 133/143 (93%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 143 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 84
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 83 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 24
Query: 788 gccaccgcctcttccacctcgaa 810
|| |||||||| |||||||||||
Sbjct: 23 gcgaccgcctcctccacctcgaa 1
>gb|BF630668.2|BF630668 HVSMEb0012M22f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0012M22f, mRNA sequence
Length = 715
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 549 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 490
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 489 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 430
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 429 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 370
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 369 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 310
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 309 tcagcgggggctgcgg 294
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 225 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 166
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 165 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 106
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 105 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 46
Query: 848 ttctcgcc 855
||||||||
Sbjct: 45 ttctcgcc 38
>gb|BF261068.2|BF261068 HVSMEf0023K20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023K20f, mRNA sequence
Length = 735
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 599 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 540
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 539 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 480
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 479 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 420
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 419 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 360
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 359 tcagcgggggctgcgg 344
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 275 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 216
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 215 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 156
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 155 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 96
Query: 848 ttctcgcc 855
||||||||
Sbjct: 95 ttctcgcc 88
>gb|BI959567.1|BI959567 HVSMEn0020D19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020D19f, mRNA sequence
Length = 648
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 620 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 561
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 560 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 501
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 500 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 441
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 440 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 381
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 380 tcagcgggggctgcgg 365
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 296 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 237
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 236 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 177
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 176 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 117
Query: 848 ttctcgcc 855
||||||||
Sbjct: 116 ttctcgcc 109
>gb|BJ475991.1|BJ475991 BJ475991 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30p12 3', mRNA sequence
Length = 483
Score = 309 bits (156), Expect = 9e-083
Identities = 221/243 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 239 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 298
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 299 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 358
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 359 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 418
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 419 aggtcgaanagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 478
Query: 578 tca 580
|||
Sbjct: 479 tca 481
>gb|BJ476005.1|BJ476005 BJ476005 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31a23 3', mRNA sequence
Length = 483
Score = 309 bits (156), Expect = 9e-083
Identities = 221/243 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 239 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 298
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 299 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 358
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 359 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 418
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 419 aggtcgaanagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 478
Query: 578 tca 580
|||
Sbjct: 479 tca 481
>gb|CV053685.1|CV053685 BNEL102a5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL102a5 5' similar to putative
kinetochore protein, mRNA sequence
Length = 705
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 274 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 333
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 334 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 393
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 394 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 453
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 454 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 513
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 514 tcagcgggggctgcgg 529
Score = 99.6 bits (50), Expect = 2e-019
Identities = 92/102 (90%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||| ||||||||||| || ||
Sbjct: 598 acgtgcttgttgcagtactcgatgaccttggagaggatctttgagttgacgttggggagc 657
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcgg 769
||||||||| |||||||||| || |||||||| |||||||||
Sbjct: 658 gggatgccg-tgtcggcgca-tcgtcctcgat-atgtggcgg 696
>gb|CV053997.1|CV053997 BNEL105f12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL105f12 5' similar to putative
SKP1 protein, mRNA sequence
Length = 708
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 223 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 282
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 283 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 342
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 343 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 402
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 403 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 462
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 463 tcagcgggggctgcgg 478
Score = 208 bits (105), Expect = 2e-052
Identities = 147/162 (90%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 547 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 606
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 607 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 666
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagctt 829
|| ||||||| ||||||| |||||||| ||| || ||||||
Sbjct: 667 gcgaccgcctnctccacctngaactcctngccgtccgagctt 708
>gb|CV054193.1|CV054193 BNEL107g4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL107g4 5' similar to putative SKP1
protein, mRNA sequence
Length = 714
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 271 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 330
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 331 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 390
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 391 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 450
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 451 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 510
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 511 tcagcgggggctgcgg 526
Score = 137 bits (69), Expect = 8e-031
Identities = 95/104 (91%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||| | | |||||||||||||||||||| || ||
Sbjct: 595 acgtgcttgttgcagtactcgatgacctggnagaggatcttggagttgacgttggggagc 654
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggat 771
|||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 655 gggatgccgttgtcggcgcaatcgtcctcgatcatgtggcggat 698
>gb|CV054937.1|CV054937 BNEL115a1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL115a1 5' similar to putative
kinetochore protein, mRNA sequence
Length = 714
Score = 309 bits (156), Expect = 9e-083
Identities = 224/247 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 319 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 378
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 379 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 438
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 439 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 498
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 499 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 558
Query: 578 tcaccgg 584
||| |||
Sbjct: 559 tcancgg 565
Score = 44.1 bits (22), Expect = 0.008
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgac 717
||||||||| ||||||||| ||| |||| | | | |||||||||||||||
Sbjct: 643 acgtgcttggtgcagtacttgatgacctggaagaagatcttggagttgac 692
>gb|CV058211.1|CV058211 BNEL35e7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL35e7 5' similar to putative SKP1
protein, mRNA sequence
Length = 615
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||| ||
Sbjct: 271 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagaca 330
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 331 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 390
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 391 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 450
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 451 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 510
Query: 578 tcaccggaggcggcgg 593
||| ||||||| ||||
Sbjct: 511 tcagcggaggctgcgg 526
Score = 42.1 bits (21), Expect = 0.033
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcg 688
|||||||||||||||||||||
Sbjct: 595 acgtgcttgttgcagtactcg 615
>gb|CV059301.1|CV059301 BNEL46f2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL46f2 5' similar to putative
kinetochore protein, mRNA sequence
Length = 640
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 525 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 466
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 465 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 406
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 405 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 346
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 345 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 286
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 285 tcagcgggggctgcgg 270
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 201 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 142
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 141 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 82
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 81 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 22
Query: 848 ttctcgcc 855
||||||||
Sbjct: 21 ttctcgcc 14
>gb|CV059709.1|CV059709 BNEL50b10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL50b10 5' similar to putative SKP1
protein, mRNA sequence
Length = 568
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 203 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 262
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 263 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 322
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 323 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 382
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 383 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 442
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 443 tcagcgggggctgcgg 458
Score = 67.9 bits (34), Expect = 6e-010
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttg 709
||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 527 acgtgcttgttgcagtactcgatgaccttggagaggatcttg 568
>gb|CV059912.1|CV059912 BNEL52c7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL52c7 5' similar to putative SKP1
protein, mRNA sequence
Length = 530
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 311 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 252
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 251 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 192
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 191 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 132
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 131 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 72
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 71 tcagcgggggctgcgg 56
>gb|CV062158.1|CV062158 BNEL77a1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL77a1 5' similar to putative
kinetochore protein, mRNA sequence
Length = 772
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 203 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 262
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 263 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 322
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 323 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 382
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 383 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 442
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 443 tcagcgggggctgcgg 458
Score = 99.6 bits (50), Expect = 2e-019
Identities = 89/98 (90%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 527 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 586
Query: 728 g-ggatgccgttgtc-ggcgcagtcat-cctcgatcat 762
| ||||||||||||| ||||||||| | ||||||||||
Sbjct: 587 gnggatgccgttgtcgggcgcagtcgtccctcgatcat 624
>gb|CV063130.1|CV063130 BNEL87a1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87a1 5' similar to putative SKP1
protein, mRNA sequence
Length = 695
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 525 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 466
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 465 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 406
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 405 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 346
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 345 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 286
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 285 tcagcgggggctgcgg 270
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 201 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 142
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 141 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 82
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 81 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 22
Query: 848 ttctcgcc 855
||||||||
Sbjct: 21 ttctcgcc 14
>gb|CV063470.1|CV063470 BNEL8F5 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL8F5 5' similar to putative SKP1 protein,
mRNA sequence
Length = 530
Score = 309 bits (156), Expect = 9e-083
Identities = 231/256 (90%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 311 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 252
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 251 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 192
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 191 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 132
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 131 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 72
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 71 tcagcgggggctgcgg 56
>gb|BF258475.2|BF258475 HVSMEf0015N04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015N04f, mRNA sequence
Length = 752
Score = 307 bits (155), Expect = 4e-082
Identities = 221/243 (90%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 246 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 187
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 186 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 127
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 126 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 67
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 66 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 7
Query: 578 tca 580
|||
Sbjct: 6 tca 4
>gb|CV053732.1|CV053732 BNEL102f1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL102f1 5' similar to putative
kinetochore protein, mRNA sequence
Length = 699
Score = 307 bits (155), Expect = 4e-082
Identities = 230/256 (89%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 239 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 298
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| |||| || ||||||||||||||||| |||
Sbjct: 299 ttcttgatgttgaatgtcttgcggatctcctctgnngttttgcccttgatcatgtcggca 358
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 359 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 418
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 419 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 478
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 479 tcancgggggctgcgg 494
Score = 155 bits (78), Expect = 3e-036
Identities = 107/116 (92%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttagg-aag 726
||||||||| ||||||||||||| |||||||| |||||||||||||||||||| || |||
Sbjct: 563 acgtgcttgntgcagtactcgatgaccttggagaggatcttggagttgacgtttgggaag 622
Query: 727 agggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgact 782
||||||||||||||||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 623 cgggatgccgttgtcggcgcagtcgtnctcgatcatgtggcggattgtctgcgact 678
>gb|BG415891.1|BG415891 HVSMEk0008M05f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0008M05f, mRNA sequence
Length = 676
Score = 303 bits (153), Expect = 6e-081
Identities = 225/249 (90%)
Strand = Plus / Minus
Query: 345 aggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttga 404
||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 615 aggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtcattcttga 556
Query: 405 tgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtct 464
||||||| |||||||| ||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 555 tgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggcaacagtct 496
Query: 465 gacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtcga 524
||||||||||||| ||||| ||||||||||| || ||||| ||||||| |||||||||||
Sbjct: 495 gacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatgaggtcga 436
Query: 525 aaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcctcaccgg 584
| || || |||||||||||||||||||| || || ||||||||||||||||||||| |||
Sbjct: 435 agagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcctcagcgg 376
Query: 585 aggcggcgg 593
||| ||||
Sbjct: 375 gggctgcgg 367
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 298 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 239
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 238 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 179
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 178 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 119
Query: 848 ttctcgcc 855
||||||||
Sbjct: 118 ttctcgcc 111
>gb|BG417611.2|BG417611 HVSMEk0018I23f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0018I23f, mRNA sequence
Length = 810
Score = 303 bits (153), Expect = 6e-081
Identities = 230/256 (89%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 621 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtanagtca 562
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 561 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 502
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 501 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 442
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 441 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 382
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 381 tcagcgggggctgcgg 366
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 297 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 238
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 237 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 178
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 177 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 118
Query: 848 ttctcgcc 855
||||||||
Sbjct: 117 ttctcgcc 110
>gb|CV054968.1|CV054968 BNEL115d1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL115d1 5' similar to putative
kinetochore protein, mRNA sequence
Length = 719
Score = 303 bits (153), Expect = 6e-081
Identities = 230/256 (89%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 230 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 289
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || |||||||||||||||| |||
Sbjct: 290 ttcttgatgttgaatgtcttgcggatctcctctggggttntgcccttgatcatgtcggca 349
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 350 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 409
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 410 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 469
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 470 tcagcgggggctgcgg 485
Score = 125 bits (63), Expect = 3e-027
Identities = 102/115 (88%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||||||||||| |||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 554 acgtgcttgttgcaatactcgatgaccttggagaggatcttggagttgacgttggggagc 613
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgact 782
||||||||| ||||||||||||| ||||||||||||||| | ||||||||||
Sbjct: 614 gggatgccggtgtcggcgcagtccgtctcgatcatgtggcgatttgtctgcgact 668
>gb|BF254873.2|BF254873 HVSMEf0005E15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0005E15f, mRNA sequence
Length = 594
Score = 297 bits (150), Expect = 3e-079
Identities = 225/250 (90%)
Strand = Plus / Minus
Query: 344 aaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttg 403
||||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||
Sbjct: 594 aaggcccactggttctccctgcggatctcttcctcctcctcaggtgtaaagtcattcttg 535
Query: 404 atgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtc 463
|||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 534 atgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggcaacagtc 475
Query: 464 tgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtcg 523
|||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||||||||
Sbjct: 474 tgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatgaggtcg 415
Query: 524 aaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcctcaccg 583
|| || || |||||||||||||||||||| || || ||||||||||||||||||||| ||
Sbjct: 414 aagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcctcagcg 355
Query: 584 gaggcggcgg 593
| ||| ||||
Sbjct: 354 ggggctgcgg 345
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 276 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 217
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 216 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 157
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 156 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 97
Query: 848 ttctcgcc 855
||||||||
Sbjct: 96 ttctcgcc 89
>gb|BF263338.3|BF263338 HV_CEa0006H19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006H19f, mRNA sequence
Length = 844
Score = 297 bits (150), Expect = 3e-079
Identities = 229/256 (89%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||| ||||||||||||||| ||||||||||| || |||||
Sbjct: 713 tactcaaaggcccactggttctncctgcggatctcctcctcctcctcaggtgtanagtca 654
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 653 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 594
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 593 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 534
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 533 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 474
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 473 tcagcgggggctgcgg 458
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 389 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 330
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 329 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 270
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 269 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 210
Query: 848 ttctcgcc 855
||||||||
Sbjct: 209 ttctcgcc 202
>gb|BE216259.3|BE216259 HV_CEb0010A09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010A09f, mRNA sequence
Length = 697
Score = 297 bits (150), Expect = 3e-079
Identities = 229/256 (89%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||| ||||||||||||| ||||||||||| || |||||
Sbjct: 619 tactcaaaggcccactggttctccntgcggatctcctcctcctcctcaggtgtanagtca 560
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 559 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 500
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 499 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 440
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 439 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 380
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 379 tcagcgggggctgcgg 364
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 295 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 236
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 235 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 176
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 175 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 116
Query: 848 ttctcgcc 855
||||||||
Sbjct: 115 ttctcgcc 108
>gb|AL511015.1|AL511015 AL511015 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06L14u 3',
mRNA sequence
Length = 601
Score = 295 bits (149), Expect = 1e-078
Identities = 229/256 (89%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 247 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 306
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 307 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 366
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 367 acagtctgacaggtcaggtccagcagccccttgatgttnaggtagttggcagccaggatg 426
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 427 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 486
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 487 tcagcgggggctgcgg 502
>gb|BJ475862.1|BJ475862 BJ475862 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30e09 3', mRNA sequence
Length = 464
Score = 295 bits (149), Expect = 1e-078
Identities = 219/243 (90%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 220 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 279
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| | ||| || ||||||||||||||||| |||
Sbjct: 280 ttcttgatgttgaatgtcttgcggatctcctntggggttttgcccttgatcatgtcggca 339
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 340 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 399
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || ||||||||||||||||| || || || ||||||||||||||||||
Sbjct: 400 aggtcgaagagggttgcctggtcgaccttgacnaactctgcgtcccagttcttgaggtcc 459
Query: 578 tca 580
|||
Sbjct: 460 tca 462
>gb|BQ660433.1|BQ660433 HI02I10u HI Hordeum vulgare subsp. vulgare cDNA clone HI02I10
3-PRIME, mRNA sequence
Length = 529
Score = 295 bits (149), Expect = 1e-078
Identities = 229/256 (89%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 257 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 316
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 317 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 376
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 377 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 436
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 437 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 496
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 497 tcagcggnggctgcgg 512
>gb|BU976492.1|BU976492 HA03M19u HA Hordeum vulgare subsp. vulgare cDNA clone HA03M19
3-PRIME, mRNA sequence
Length = 556
Score = 295 bits (149), Expect = 1e-078
Identities = 229/256 (89%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 257 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 316
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 317 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 376
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 377 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 436
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 437 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 496
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 497 tcancgggggctgcgg 512
>gb|CB874594.1|CB874594 HX05L20w HX Hordeum vulgare subsp. vulgare cDNA clone HX05L20
3-PRIME, mRNA sequence
Length = 539
Score = 295 bits (149), Expect = 1e-078
Identities = 229/256 (89%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 257 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 316
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 317 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 376
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 377 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 436
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 437 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 496
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 497 tcancgggggctgcgg 512
>gb|CB882663.1|CB882663 HL02I04w HL Hordeum vulgare subsp. vulgare cDNA clone HL02I04
3-PRIME, mRNA sequence
Length = 575
Score = 295 bits (149), Expect = 1e-078
Identities = 229/256 (89%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 234 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 293
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 294 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 353
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 354 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 413
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 414 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 473
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 474 tcancgggggctgcgg 489
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgat 690
|||||||||||||||||||||||
Sbjct: 552 acgtgcttgttgcagtactcgat 574
>gb|AL503228.1|AL503228 AL503228 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01D08T 5', mRNA sequence
Length = 700
Score = 293 bits (148), Expect = 5e-078
Identities = 229/256 (89%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 551 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 492
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 491 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 432
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 431 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 372
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 371 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 312
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 311 tcagcgggggctgcgg 296
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 233 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 174
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 173 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 114
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 113 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 54
Query: 848 ttctcgcc 855
||||||||
Sbjct: 53 ttctcgcc 46
>gb|AL503322.1|AL503322 AL503322 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K04T 5', mRNA sequence
Length = 700
Score = 293 bits (148), Expect = 5e-078
Identities = 229/256 (89%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 680 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 621
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 620 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 561
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 560 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 501
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 500 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 441
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 440 tcagcgggggctgcgg 425
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 362 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 303
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 302 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 243
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 242 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 183
Query: 848 ttctcgcc 855
||||||||
Sbjct: 182 ttctcgcc 175
>gb|AL507741.1|AL507741 AL507741 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06L14V 5',
mRNA sequence
Length = 700
Score = 293 bits (148), Expect = 5e-078
Identities = 229/256 (89%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 608 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 549
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 548 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 489
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 488 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 429
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 428 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 369
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 368 tcagcgggggctgcgg 353
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 290 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 231
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 230 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 171
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 170 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 111
Query: 848 ttctcgcc 855
||||||||
Sbjct: 110 ttctcgcc 103
>gb|BF266381.2|BF266381 HV_CEa0014P19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0014P19f, mRNA sequence
Length = 534
Score = 293 bits (148), Expect = 5e-078
Identities = 229/256 (89%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 448 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 389
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
||||| |||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 388 ttctttatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 329
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
||||| |||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 328 acagtgtgacaggtcaggtccagcagccccttgatgtttaggtagttggcagccaggatg 269
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 268 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttcttgaggtcc 209
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 208 tcaacgggggctgcgg 193
Score = 180 bits (91), Expect = 6e-044
Identities = 112/119 (94%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 124 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 65
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccat 786
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 64 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccat 6
>gb|BJ471141.1|BJ471141 BJ471141 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30p12 5', mRNA sequence
Length = 440
Score = 293 bits (148), Expect = 5e-078
Identities = 221/244 (90%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 246 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 187
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 186 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 127
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 126 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 67
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagtt-cttgaggtc 576
|||||||| || || |||||||||||||||||||| || || |||||||| |||||||||
Sbjct: 66 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttncttgaggtc 7
Query: 577 ctca 580
||||
Sbjct: 6 ctca 3
>gb|BJ473227.1|BJ473227 BJ473227 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41d08 5', mRNA sequence
Length = 506
Score = 293 bits (148), Expect = 5e-078
Identities = 221/244 (90%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 246 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcaggtgtaaagtca 187
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 186 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 127
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 126 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 67
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagtt-cttgaggtc 576
|||||||| || || |||||||||||||||||||| || || |||||||| |||||||||
Sbjct: 66 aggtcgaagagggttgcctggtcgaccttgacgaactctgcgtcccagttncttgaggtc 7
Query: 577 ctca 580
||||
Sbjct: 6 ctca 3
>gb|BQ460308.1|BQ460308 HA06K06r HA Hordeum vulgare subsp. vulgare cDNA clone HA06K06
5-PRIME, mRNA sequence
Length = 663
Score = 293 bits (148), Expect = 5e-078
Identities = 229/256 (89%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 624 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 565
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 564 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 505
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 504 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 445
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 444 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 385
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 384 tcagcgggggctgcgg 369
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 306 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 247
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 246 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 187
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 186 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 127
Query: 848 ttctcgcc 855
||||||||
Sbjct: 126 ttctcgcc 119
>gb|BQ460647.1|BQ460647 HA06F14r HA Hordeum vulgare subsp. vulgare cDNA clone HA06F14
5-PRIME, mRNA sequence
Length = 627
Score = 293 bits (148), Expect = 5e-078
Identities = 229/256 (89%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 616 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 557
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 556 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 497
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 496 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 437
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 436 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 377
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 376 tcagcgggggctgcgg 361
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 298 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 239
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 238 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 179
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 178 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 119
Query: 848 ttctcgcc 855
||||||||
Sbjct: 118 ttctcgcc 111
>gb|BQ462948.1|BQ462948 HI02I10r HI Hordeum vulgare subsp. vulgare cDNA clone HI02I10
5-PRIME, mRNA sequence
Length = 656
Score = 293 bits (148), Expect = 5e-078
Identities = 229/256 (89%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 579 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 520
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 519 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 460
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 459 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 400
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 399 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 340
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 339 tcagcgggggctgcgg 324
Score = 254 bits (128), Expect = 5e-066
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||
Sbjct: 261 acgtgcttgttgcagtactcgatgaccttggagaggatcttggagttgacgttggggagc 202
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtggcggatggtctgcgactccatc 787
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 201 gggatgccgttgtcggcgcagtcgtcctcgatcatgtggcggattgtctgcgactccatg 142
Query: 788 gccaccgcctcttccacctcgaactcctcgccatcggagcttttgagggttatcatcttc 847
|| |||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 141 gcgaccgcctcctccacctcgaactcctcgccgtccgagctcttgagcgtgatcatcttc 82
Query: 848 ttctcgcc 855
||||||||
Sbjct: 81 ttctcgcc 74
>gb|BQ470259.1|BQ470259 HX02E23r HX Hordeum vulgare subsp. vulgare cDNA clone HX02E23
5-PRIME, mRNA sequence
Length = 615
Score = 293 bits (148), Expect = 5e-078
Identities = 229/256 (89%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 340 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 281
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 280 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 221
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 220 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 161
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 160 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 101
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 100 tcagcgggggctgcgg 85
>gb|BQ665146.1|BQ665146 HX02E23u HX Hordeum vulgare subsp. vulgare cDNA clone HX02E23
3-PRIME, mRNA sequence
Length = 560
Score = 293 bits (148), Expect = 5e-078
Identities = 229/256 (89%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 276 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 335
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 336 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 395
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 396 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 455
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 456 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 515
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 516 tcagcgggggctgcgg 531
>gb|BQ665559.1|BQ665559 HX04C11u HX Hordeum vulgare subsp. vulgare cDNA clone HX04C11
3-PRIME, mRNA sequence
Length = 570
Score = 293 bits (148), Expect = 5e-078
Identities = 229/256 (89%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 269 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 328
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 329 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 388
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 389 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 448
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 449 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 508
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 509 tcagcgggggctgcgg 524
>gb|BQ665771.1|BQ665771 HZ01B03u HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01B03
3-PRIME, mRNA sequence
Length = 534
Score = 293 bits (148), Expect = 5e-078
Identities = 229/256 (89%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct: 250 tactcaaaggcccactggttctccctgcggatctcctcctcctcctcgggtgtaaagtca 309
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 310 ttcttgatgttgaatgtcttgcggatctcctctggggttttgcccttgatcatgtcggca 369
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||||
Sbjct: 370 acagtctgacaggtcaggtccagcagccccttgatgttgaggtagttggcagccaggatg 429
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatcccagttcttgaggtcc 577
|||||||| || || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 430 aggtcgaagagggttgcctggtcaaccttgacgaactctgcgtcccagttcttgaggtcc 489
Query: 578 tcaccggaggcggcgg 593
||| ||| ||| ||||
Sbjct: 490 tcagcgggggctgcgg 505
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 118,317
Number of Sequences: 312970
Number of extensions: 118317
Number of successful extensions: 37710
Number of sequences better than 0.5: 260
Number of HSP's better than 0.5 without gapping: 259
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 36936
Number of HSP's gapped (non-prelim): 546
length of query: 955
length of database: 175,134,539
effective HSP length: 19
effective length of query: 936
effective length of database: 169,188,109
effective search space: 158360070024
effective search space used: 158360070024
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)