BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805016.2.1
(1645 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF257618.2|BF257618 HVSMEf0013F22f Hordeum vulgare seedl... 547 e-154
gb|BQ465243.1|BQ465243 HU03A18r HU Hordeum vulgare subsp. v... 547 e-154
gb|CA008057.1|CA008057 HU09M12r HU Hordeum vulgare subsp. v... 511 e-143
gb|BU990375.1|BU990375 HF24N12r HF Hordeum vulgare subsp. v... 484 e-135
gb|BF260166.2|BF260166 HVSMEf0021E13f Hordeum vulgare seedl... 480 e-134
gb|CA011986.1|CA011986 HT04B17r HT Hordeum vulgare subsp. v... 474 e-132
gb|BJ544004.1|BJ544004 BJ544004 K. Sato unpublished cDNA li... 474 e-132
gb|AV913940.1|AV913940 AV913940 K. Sato unpublished cDNA li... 444 e-123
gb|BJ544857.1|BJ544857 BJ544857 K. Sato unpublished cDNA li... 402 e-110
gb|BE216076.2|BE216076 HV_CEb0009F11f Hordeum vulgare seedl... 394 e-108
gb|CA027033.1|CA027033 HZ57L06r HZ Hordeum vulgare subsp. v... 357 8e-097
gb|AW983459.2|AW983459 HVSMEg0010L09f Hordeum vulgare pre-a... 351 5e-095
gb|BG414677.1|BG414677 HVSMEk0003F07f Hordeum vulgare testa... 339 2e-091
gb|BQ464485.1|BQ464485 HF02G16r HF Hordeum vulgare subsp. v... 339 2e-091
gb|BI950800.1|BI950800 HVSMEl0023D18f Hordeum vulgare spike... 309 2e-082
gb|AL507409.1|AL507409 AL507409 Hordeum vulgare Barke devel... 293 9e-078
gb|BF623883.2|BF623883 HVSMEa0007H15f Hordeum vulgare seedl... 293 9e-078
gb|BI948616.1|BI948616 HVSMEl0010E07f Hordeum vulgare spike... 293 9e-078
gb|BI950265.1|BI950265 HVSMEl0020A13f Hordeum vulgare spike... 293 9e-078
gb|BG368299.2|BG368299 HVSMEi0017H23f Hordeum vulgare 20 DA... 293 9e-078
gb|BM816720.1|BM816720 HC114E01_SK.ab1 HC Hordeum vulgare s... 293 9e-078
gb|BQ460721.1|BQ460721 HA06B20r HA Hordeum vulgare subsp. v... 293 9e-078
gb|BM368094.2|BM368094 EBed01_SQ002_C15_R endosperm, 6 DPA,... 293 9e-078
gb|CA029934.1|CA029934 HX05J22r HX Hordeum vulgare subsp. v... 293 9e-078
gb|BU978698.1|BU978698 HA14A10r HA Hordeum vulgare subsp. v... 280 1e-073
gb|BQ469755.1|BQ469755 HZ01M10r HZ Hordeum vulgare subsp. v... 278 6e-073
gb|BI949898.1|BI949898 HVSMEl0016N02f Hordeum vulgare spike... 272 3e-071
gb|BG369741.2|BG369741 HVSMEi0025M09f Hordeum vulgare 20 DA... 266 2e-069
gb|CD662734.1|CD662734 UCRHV18_02dg12_b1 Drought-stressed D... 248 5e-064
gb|CA008519.1|CA008519 HU11D12r HU Hordeum vulgare subsp. v... 234 7e-060
gb|BQ662213.1|BQ662213 HS01B18w HS Hordeum vulgare subsp. v... 232 3e-059
gb|BQ764773.1|BQ764773 EBca01_SQ004_I20 _R carpel, pre-anth... 230 1e-058
gb|BG417170.1|BG417170 HVSMEk0016J11f Hordeum vulgare testa... 228 5e-058
gb|BQ467415.1|BQ467415 HS03K23r HS Hordeum vulgare subsp. v... 206 2e-051
gb|AV921554.1|AV921554 AV921554 K. Sato unpublished cDNA li... 202 3e-050
gb|BM444581.1|BM444581 EBem09_SQ005_M15_R embryo, 1 Day ger... 198 4e-049
gb|CA000540.1|CA000540 HS07K15u HS Hordeum vulgare subsp. v... 194 6e-048
gb|CA032326.1|CA032326 HX12L02r HX Hordeum vulgare subsp. v... 188 4e-046
gb|AL500264.1|AL500264 AL500264 Hordeum vulgare Barke etiol... 186 2e-045
gb|AV934648.1|AV934648 AV934648 K. Sato unpublished cDNA li... 180 1e-043
gb|AV936843.1|AV936843 AV936843 K. Sato unpublished cDNA li... 178 4e-043
gb|BJ546339.1|BJ546339 BJ546339 K. Sato unpublished cDNA li... 178 4e-043
gb|BG369450.2|BG369450 HVSMEi0024H04f Hordeum vulgare 20 DA... 174 6e-042
gb|BJ545521.1|BJ545521 BJ545521 K. Sato unpublished cDNA li... 172 2e-041
gb|BE216060.2|BE216060 HV_CEb0009E14f Hordeum vulgare seedl... 170 9e-041
gb|BQ662690.1|BQ662690 HS03K23u HS Hordeum vulgare subsp. v... 153 2e-035
gb|BM445276.2|BM445276 EBem09_SQ007_P03_R embryo, 1 Day ger... 153 2e-035
gb|BF620937.3|BF620937 HVSMEa0003B02f Hordeum vulgare seedl... 143 2e-032
gb|BQ665984.1|BQ665984 HZ01M10u HZ Hordeum vulgare subsp. v... 141 8e-032
gb|CA032830.1|CA032830 HX14F06r HX Hordeum vulgare subsp. v... 133 2e-029
gb|CA015912.1|CA015912 HV11G05u HV Hordeum vulgare subsp. v... 103 2e-020
gb|BM371524.2|BM371524 EBma08_SQ003_B03_R maternal, 28 DPA,... 100 3e-019
gb|BI777624.2|BI777624 EBro08_SQ001_A11_R root, 3 week, dro... 100 3e-019
gb|AL507036.1|AL507036 AL507036 Hordeum vulgare Barke devel... 98 1e-018
gb|AL507613.1|AL507613 AL507613 Hordeum vulgare Barke devel... 98 1e-018
gb|BQ460661.1|BQ460661 HA06E17r HA Hordeum vulgare subsp. v... 98 1e-018
gb|CA002853.1|CA002853 HS08L13r HS Hordeum vulgare subsp. v... 98 1e-018
gb|CA003536.1|CA003536 HS14M16r HS Hordeum vulgare subsp. v... 98 1e-018
gb|CA009497.1|CA009497 HU14E17r HU Hordeum vulgare subsp. v... 98 1e-018
gb|CA018123.1|CA018123 HV07J04r HV Hordeum vulgare subsp. v... 98 1e-018
gb|CA018856.1|CA018856 HV09N19r HV Hordeum vulgare subsp. v... 98 1e-018
gb|CA031428.1|CA031428 HX09O18r HX Hordeum vulgare subsp. v... 98 1e-018
gb|CV059013.1|CV059013 BNEL43d7 Barley EST endosperm librar... 98 1e-018
gb|AL510614.1|AL510614 AL510614 Hordeum vulgare Barke devel... 94 2e-017
gb|CA019760.1|CA019760 HV13A11r HV Hordeum vulgare subsp. v... 94 2e-017
gb|CA020023.1|CA020023 HV14B22r HV Hordeum vulgare subsp. v... 94 2e-017
gb|AL511322.1|AL511322 AL511322 Hordeum vulgare Barke devel... 92 7e-017
gb|BF624632.2|BF624632 HVSMEa0017F04f Hordeum vulgare seedl... 92 7e-017
gb|BE195094.1|BE195094 HVSMEh0088E12f Hordeum vulgare 5-45 ... 92 7e-017
gb|BF627842.2|BF627842 HVSMEb0005P05f Hordeum vulgare seedl... 92 7e-017
gb|BI947601.1|BI947601 HVSMEl0006A21f Hordeum vulgare spike... 92 7e-017
gb|BF065487.1|BF065487 HV_CEb0012J03f Hordeum vulgare seedl... 92 7e-017
gb|CA020250.1|CA020250 HV14M06r HV Hordeum vulgare subsp. v... 92 7e-017
gb|BQ468361.1|BQ468361 HM01A19T HM Hordeum vulgare subsp. v... 90 3e-016
gb|AV832823.1|AV832823 AV832823 K. Sato unpublished cDNA li... 88 1e-015
gb|BU996447.1|BU996447 HM13K09r HM Hordeum vulgare subsp. v... 86 4e-015
gb|CB882786.1|CB882786 HL02N12w HL Hordeum vulgare subsp. v... 86 4e-015
gb|BI946594.1|BI946594 HVSMEl0001A09f Hordeum vulgare spike... 80 3e-013
gb|AL506148.1|AL506148 AL506148 Hordeum vulgare Barke devel... 78 1e-012
gb|AL507668.1|AL507668 AL507668 Hordeum vulgare Barke devel... 78 1e-012
gb|BE559324.1|BE559324 HV_CEb0024B22f Hordeum vulgare seedl... 78 1e-012
gb|BF265760.2|BF265760 HV_CEa0013E07f Hordeum vulgare seedl... 78 1e-012
gb|BF265966.2|BF265966 HV_CEa0013M21f Hordeum vulgare seedl... 78 1e-012
gb|AV924641.1|AV924641 AV924641 K. Sato unpublished cDNA li... 78 1e-012
gb|AV926309.1|AV926309 AV926309 K. Sato unpublished cDNA li... 78 1e-012
gb|AV932975.1|AV932975 AV932975 K. Sato unpublished cDNA li... 78 1e-012
gb|BI776717.2|BI776717 EBpi07_SQ001_I13_R pistil, 12 DPA, n... 78 1e-012
gb|BM370867.2|BM370867 EBro04_SQ002_J15_R root, 3 week, sal... 78 1e-012
gb|BQ754405.1|BQ754405 EBca01_SQ003_N18_R carpel, pre-anthe... 78 1e-012
gb|BQ765166.1|BQ765166 EBro03_SQ006_N12_R root, 3 week, wat... 78 1e-012
gb|BQ767061.1|BQ767061 EBro08_SQ007_I24_R root, 3 week, dro... 78 1e-012
gb|CA002173.1|CA002173 HS06L19r HS Hordeum vulgare subsp. v... 78 1e-012
gb|CA002177.1|CA002177 HS06L24r HS Hordeum vulgare subsp. v... 78 1e-012
gb|CA003209.1|CA003209 HS09L24r HS Hordeum vulgare subsp. v... 78 1e-012
gb|CA003896.1|CA003896 HS15P12r HS Hordeum vulgare subsp. v... 78 1e-012
gb|CA007094.1|CA007094 HU06L13r HU Hordeum vulgare subsp. v... 78 1e-012
gb|CA013492.1|CA013492 HT08K04r HT Hordeum vulgare subsp. v... 78 1e-012
gb|CA017990.1|CA017990 HV07B06r HV Hordeum vulgare subsp. v... 78 1e-012
gb|CA023375.1|CA023375 HZ46A15r HZ Hordeum vulgare subsp. v... 78 1e-012
gb|BJ547080.1|BJ547080 BJ547080 K. Sato unpublished cDNA li... 78 1e-012
gb|BJ547294.1|BJ547294 BJ547294 K. Sato unpublished cDNA li... 78 1e-012
gb|BJ547556.1|BJ547556 BJ547556 K. Sato unpublished cDNA li... 78 1e-012
gb|BJ547588.1|BJ547588 BJ547588 K. Sato unpublished cDNA li... 78 1e-012
gb|BU998754.1|BU998754 HI12B03r HI Hordeum vulgare subsp. v... 76 4e-012
gb|CA014051.1|CA014051 HT10E01r HT Hordeum vulgare subsp. v... 74 2e-011
gb|BU983194.1|BU983194 HA28N18r HA Hordeum vulgare subsp. v... 72 6e-011
gb|BF616389.2|BF616389 HVSMEc0007C16f Hordeum vulgare seedl... 70 3e-010
gb|BI955028.1|BI955028 HVSMEm0020O14f Hordeum vulgare green... 70 3e-010
gb|CA027461.1|CA027461 HZ58P24r HZ Hordeum vulgare subsp. v... 70 3e-010
gb|BF616622.2|BF616622 HVSMEc0010N09f Hordeum vulgare seedl... 66 4e-009
gb|BE420930.1|BE420930 HWM004.A07 ITEC HWM Barley Leaf Libr... 64 2e-008
gb|BI948387.1|BI948387 HVSMEl0009F14f Hordeum vulgare spike... 64 2e-008
gb|BF266282.2|BF266282 HV_CEa0014L02f Hordeum vulgare seedl... 64 2e-008
gb|BJ447003.1|BJ447003 BJ447003 K. Sato unpublished cDNA li... 64 2e-008
gb|BQ459152.1|BQ459152 HA02C15r HA Hordeum vulgare subsp. v... 64 2e-008
gb|BQ460041.1|BQ460041 HA07G07r HA Hordeum vulgare subsp. v... 64 2e-008
gb|BU967401.1|BU967401 HB04D03r BC Hordeum vulgare subsp. v... 64 2e-008
gb|BU967531.1|BU967531 HB04J15r BC Hordeum vulgare subsp. v... 64 2e-008
gb|BU973690.1|BU973690 HB25L17r BC Hordeum vulgare subsp. v... 64 2e-008
gb|BU978653.1|BU978653 HA13N23r HA Hordeum vulgare subsp. v... 64 2e-008
gb|BU986529.1|BU986529 HF12C06r HF Hordeum vulgare subsp. v... 64 2e-008
gb|BU987246.1|BU987246 HF14D12r HF Hordeum vulgare subsp. v... 64 2e-008
gb|BU987917.1|BU987917 HF16C03r HF Hordeum vulgare subsp. v... 64 2e-008
gb|BU988005.1|BU988005 HF16G10r HF Hordeum vulgare subsp. v... 64 2e-008
gb|BU988955.1|BU988955 HF19E06r HF Hordeum vulgare subsp. v... 64 2e-008
gb|CA032014.1|CA032014 HX11M05r HX Hordeum vulgare subsp. v... 64 2e-008
gb|CB877624.1|CB877624 HP05J18T HP Hordeum vulgare subsp. v... 64 2e-008
gb|BQ758588.1|BQ758588 EBma07_SQ002_O03_R maternal, 21 DPA,... 62 6e-008
gb|CB878788.1|CB878788 HP09M21T HP Hordeum vulgare subsp. v... 62 6e-008
gb|BI953415.1|BI953415 HVSMEm0012J14f Hordeum vulgare green... 60 2e-007
gb|BM369466.2|BM369466 EBem07_SQ003_K18_R embryo, 28 DPA, n... 60 2e-007
gb|BF625733.2|BF625733 HVSMEa0013G20f Hordeum vulgare seedl... 58 1e-006
gb|BG367410.1|BG367410 HVSMEi0012C18f Hordeum vulgare 20 DA... 58 1e-006
gb|BU986091.1|BU986091 HF09K01r HF Hordeum vulgare subsp. v... 58 1e-006
gb|BE194325.1|BE194325 HVSMEh0085C11f Hordeum vulgare 5-45 ... 54 2e-005
gb|BF267676.2|BF267676 HV_CEa0018J08f Hordeum vulgare seedl... 50 2e-004
gb|BI947010.1|BI947010 HVSMEl0003D06f Hordeum vulgare spike... 48 0.001
gb|AL501450.1|AL501450 AL501450 Hordeum vulgare Barke roots... 46 0.004
gb|AL509560.1|AL509560 AL509560 Hordeum vulgare Barke devel... 46 0.004
gb|AL510951.1|AL510951 AL510951 Hordeum vulgare Barke devel... 46 0.004
gb|BE193876.2|BE193876 HVSMEh0082M09f Hordeum vulgare 5-45 ... 46 0.004
gb|BE196549.2|BE196549 HVSMEh0092J17f Hordeum vulgare 5-45 ... 46 0.004
gb|AV930296.1|AV930296 AV930296 K. Sato unpublished cDNA li... 46 0.004
gb|AJ462890.1|AJ462890 AJ462890 S00002 Hordeum vulgare subs... 46 0.004
gb|AJ462891.1|AJ462891 AJ462891 S00002 Hordeum vulgare subs... 46 0.004
gb|BJ451484.1|BJ451484 BJ451484 K. Sato unpublished cDNA li... 46 0.004
gb|BJ455006.1|BJ455006 BJ455006 K. Sato unpublished cDNA li... 46 0.004
gb|BJ456136.1|BJ456136 BJ456136 K. Sato unpublished cDNA li... 46 0.004
gb|BJ458979.1|BJ458979 BJ458979 K. Sato unpublished cDNA li... 46 0.004
gb|BM368741.2|BM368741 EBem08_SQ004_H16_R embryo, 40 DPA, n... 46 0.004
gb|BM374239.2|BM374239 EBpi03_SQ003_B01_R pistil, 4 DPA, no... 46 0.004
gb|BQ756054.1|BQ756054 EBem05_SQ001_H16_R embryo, 14 DPA, n... 46 0.004
gb|BQ763089.1|BQ763089 EBro02_SQ007_L03_R root, 3 week, hyd... 46 0.004
gb|BU971318.1|BU971318 HB17E08r BC Hordeum vulgare subsp. v... 46 0.004
gb|BU999535.1|BU999535 HI14M21r HI Hordeum vulgare subsp. v... 46 0.004
gb|CA000804.1|CA000804 HS06L19u HS Hordeum vulgare subsp. v... 46 0.004
gb|CA027458.1|CA027458 HZ58P20r HZ Hordeum vulgare subsp. v... 46 0.004
gb|CA027563.1|CA027563 HZ59F03r HZ Hordeum vulgare subsp. v... 46 0.004
gb|CB859966.1|CB859966 HI12C19w HI Hordeum vulgare subsp. v... 46 0.004
gb|CB874739.1|CB874739 HX06C21w HX Hordeum vulgare subsp. v... 46 0.004
gb|BM370893.2|BM370893 EBro04_SQ002_L09_R root, 3 week, sal... 44 0.015
gb|AV913049.1|AV913049 AV913049 K. Sato unpublished cDNA li... 42 0.057
gb|AV915331.1|AV915331 AV915331 K. Sato unpublished cDNA li... 42 0.057
gb|AV917803.1|AV917803 AV917803 K. Sato unpublished cDNA li... 42 0.057
gb|AV918185.1|AV918185 AV918185 K. Sato unpublished cDNA li... 42 0.057
gb|AV918750.1|AV918750 AV918750 K. Sato unpublished cDNA li... 42 0.057
gb|AV918791.1|AV918791 AV918791 K. Sato unpublished cDNA li... 42 0.057
gb|AV919081.1|AV919081 AV919081 K. Sato unpublished cDNA li... 42 0.057
gb|AV921881.1|AV921881 AV921881 K. Sato unpublished cDNA li... 42 0.057
gb|AV929735.1|AV929735 AV929735 K. Sato unpublished cDNA li... 42 0.057
gb|AV931194.1|AV931194 AV931194 K. Sato unpublished cDNA li... 42 0.057
gb|AV932812.1|AV932812 AV932812 K. Sato unpublished cDNA li... 42 0.057
gb|AV933573.1|AV933573 AV933573 K. Sato unpublished cDNA li... 42 0.057
gb|AV934096.1|AV934096 AV934096 K. Sato unpublished cDNA li... 42 0.057
gb|AV935440.1|AV935440 AV935440 K. Sato unpublished cDNA li... 42 0.057
gb|AV935618.1|AV935618 AV935618 K. Sato unpublished cDNA li... 42 0.057
gb|AV936006.1|AV936006 AV936006 K. Sato unpublished cDNA li... 42 0.057
gb|AV936347.1|AV936347 AV936347 K. Sato unpublished cDNA li... 42 0.057
gb|AJ435921.1|AJ435921 AJ435921 S00002 Hordeum vulgare subs... 42 0.057
gb|BJ471254.1|BJ471254 BJ471254 K. Sato unpublished cDNA li... 42 0.057
gb|BJ547221.1|BJ547221 BJ547221 K. Sato unpublished cDNA li... 42 0.057
gb|BJ547299.1|BJ547299 BJ547299 K. Sato unpublished cDNA li... 42 0.057
gb|BJ547912.1|BJ547912 BJ547912 K. Sato unpublished cDNA li... 42 0.057
gb|BJ548050.1|BJ548050 BJ548050 K. Sato unpublished cDNA li... 42 0.057
gb|BJ548460.1|BJ548460 BJ548460 K. Sato unpublished cDNA li... 42 0.057
gb|BJ548534.1|BJ548534 BJ548534 K. Sato unpublished cDNA li... 42 0.057
gb|BJ548555.1|BJ548555 BJ548555 K. Sato unpublished cDNA li... 42 0.057
gb|BJ548639.1|BJ548639 BJ548639 K. Sato unpublished cDNA li... 42 0.057
gb|BJ549026.1|BJ549026 BJ549026 K. Sato unpublished cDNA li... 42 0.057
gb|BJ549059.1|BJ549059 BJ549059 K. Sato unpublished cDNA li... 42 0.057
gb|BJ549776.1|BJ549776 BJ549776 K. Sato unpublished cDNA li... 42 0.057
gb|BJ549828.1|BJ549828 BJ549828 K. Sato unpublished cDNA li... 42 0.057
gb|BG365672.1|BG365672 HVSMEi0003L05f Hordeum vulgare 20 DA... 40 0.23
gb|BM097025.2|BM097025 EBpi07_SQ002_C14_R pistil, 12 DPA, n... 40 0.23
>gb|BF257618.2|BF257618 HVSMEf0013F22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0013F22f, mRNA sequence
Length = 873
Score = 547 bits (276), Expect = e-154
Identities = 570/668 (85%)
Strand = Plus / Minus
Query: 580 tccacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcata 639
|||||| |||| || || ||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 676 tccacgctgaactcgacgaacaggcgacccttcatgaaaggccggccatgctgaggcatg 617
Query: 640 ccttcatcgttaatggccttgtgttgacctggtttaataacctccccggggtcagatttg 699
|| || || || ||||||||||| ||||| || || || | |||||| || | ||||||
Sbjct: 616 ccctcgtcatttatggccttgtgctgaccaggctttatgatctccccaggattggatttg 557
Query: 700 atcagaagctgtcgcccatcaagatgagtaagaacaaactggaagccacacaatgcttcg 759
|||||||||||||| ||||||||||| || |||||||||||||||||||| | || ||
Sbjct: 556 atcagaagctgtcggccatcaagatgggtcagaacaaactggaagccacagagcgcctca 497
Query: 760 gtgagagagattgtgtgctcaacatataagtcatcgtacatcctcttaaattttggatgg 819
|| |||||||| || |||||||| | | |||||| || ||||||| |||||||| ||
Sbjct: 496 gtcagagagatcgtatgctcaacgaacaggtcatccgacttcctcttgaattttgggtgc 437
Query: 820 tctttaagttgcaagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagct 879
||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 436 tctttaagttgcaagacaaaaactatgtctcctgtcactgtatcaggagcttcatcagct 377
Query: 880 tgaccctggaatacaatcttttggttatgttgcattcctttctccacatgaacctctaac 939
| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct: 376 tcaccctggaatacaatcttttggccatgttgcattcccttctccacatgaacctccaag 317
Query: 940 accttcttctcctggactaccttgtttcctttacagcttgggcatttgtccttgtcactt 999
||||||||||||||| ||| ||||| ||| | |||||||||||| | ||||||||||||
Sbjct: 316 accttcttctcctgggttactttgttgcctctgcagcttgggcatctatccttgtcactt 257
Query: 1000 atgatctcacctgatcctttgcattcagggcaaacagtgttcatctgttggatcatgcca 1059
|| ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 256 atcatctcgcctgatcctctgcattcagggcaaacagtattcatctgttggatcatgcca 197
Query: 1060 aggcctatctgtcttgtgattgttctcattccagcaccacgacaaccatggcatgttcct 1119
| |||||||||||||| || | |||||||| |||||||| |||||| ||| || |
Sbjct: 196 ggtcctatctgtcttgttatcatcctcattcctgcaccacggcaaccactgcaagtagcc 137
Query: 1120 gatgccccactcttggatcctttccccttgcacttggagcacaaagcactccgcgataaa 1179
||||||||||||||||||||||| |||||||| || || | | || |||| ||||||
Sbjct: 136 gatgccccactcttggatcctttacccttgcattttccacaaagaacattccgtgataaa 77
Query: 1180 gatagtttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcacc 1239
|||||||| ||||| | ||||||||||| || || || ||||||||||| |||||||||
Sbjct: 76 gatagttttttggtagcaccattgtacaggtcttccaacgaaaccttcatggtatgcacc 17
Query: 1240 acatcttc 1247
|| |||||
Sbjct: 16 acgtcttc 9
>gb|BQ465243.1|BQ465243 HU03A18r HU Hordeum vulgare subsp. vulgare cDNA clone HU03A18
5-PRIME, mRNA sequence
Length = 654
Score = 547 bits (276), Expect = e-154
Identities = 507/584 (86%)
Strand = Plus / Minus
Query: 694 gatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactggaagccacacaat 753
|||||||||||||||||||| ||||||||||| || |||||||||||||||||||| |
Sbjct: 597 gatttgatcagaagctgtcggccatcaagatgggtcagaacaaactggaagccacagagc 538
Query: 754 gcttcggtgagagagattgtgtgctcaacatataagtcatcgtacatcctcttaaatttt 813
|| || || |||||||| || |||||||| | | |||||| || ||||||| ||||||
Sbjct: 537 gcctcagtcagagagatcgtatgctcaacgaacaggtcatccgacttcctcttgaatttt 478
Query: 814 ggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccgtatcaggagcttca 873
|| || ||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 477 gggtgctctttaagttgcaagacaaaaactatgtctcctgtcactgtatcaggagcttca 418
Query: 874 tcagcttgaccctggaatacaatcttttggttatgttgcattcctttctccacatgaacc 933
||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 417 tcagcttcaccctggaatacaatcttttggccatgttgcattcccttctccacatgaacc 358
Query: 934 tctaacaccttcttctcctggactaccttgtttcctttacagcttgggcatttgtccttg 993
|| || ||||||||||||||| ||| ||||| ||| | |||||||||||| | ||||||
Sbjct: 357 tccaagaccttcttctcctgggttactttgttgcctctgcagcttgggcatctatccttg 298
Query: 994 tcacttatgatctcacctgatcctttgcattcagggcaaacagtgttcatctgttggatc 1053
|||||||| ||||| ||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 297 tcacttatcatctcgcctgatcctctgcattcagggcaaacagtattcatctgttggatc 238
Query: 1054 atgccaaggcctatctgtcttgtgattgttctcattccagcaccacgacaaccatggcat 1113
|||||| | |||||||||||||| || | |||||||| |||||||| |||||| |||
Sbjct: 237 atgccaggtcctatctgtcttgttatcatcctcattcctgcaccacggcaaccactgcaa 178
Query: 1114 gttcctgatgccccactcttggatcctttccccttgcacttggagcacaaagcactccgc 1173
|| | ||||||||||||||||||||||| |||||||| || || | | || ||||
Sbjct: 177 gtagccgatgccccactcttggatcctttacccttgcattttccacaaagaacattccgt 118
Query: 1174 gataaagatagtttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagta 1233
|||||||||||||| ||||| | ||||||||||| || || || ||||||||||| |||
Sbjct: 117 gataaagatagttttttggtagcaccattgtacaggtcttccaacgaaaccttcatggta 58
Query: 1234 tgcaccacatcttcaccacgcttttgtctgcgtcctcttgagct 1277
|||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 57 tgcaccacatcttcaccacgcttttgtctgcgtcctctcgagct 14
>gb|CA008057.1|CA008057 HU09M12r HU Hordeum vulgare subsp. vulgare cDNA clone HU09M12
5-PRIME, mRNA sequence
Length = 639
Score = 511 bits (258), Expect = e-143
Identities = 525/614 (85%)
Strand = Plus / Minus
Query: 652 atggccttgtgttgacctggtttaataacctccccggggtcagatttgatcagaagctgt 711
||||||||||| ||||| || || || | |||||| || | ||||||||||||||||||
Sbjct: 624 atggccttgtgctgaccaggctttatgatctccccaggattggatttgatcagaagctgt 565
Query: 712 cgcccatcaagatgagtaagaacaaactggaagccacacaatgcttcggtgagagagatt 771
|| ||||||||||| || |||||||||||||||||||| | || || || ||||||||
Sbjct: 564 cggccatcaagatgggtcagaacaaactggaagccacagagcgcctcagtcagagagatc 505
Query: 772 gtgtgctcaacatataagtcatcgtacatcctcttaaattttggatggtctttaagttgc 831
|| |||||||| | | |||||| || ||||||| |||||||| || ||||||||||||
Sbjct: 504 gtatgctcaacgaacaggtcatccgacttcctcttgaattttgggtgctctttaagttgc 445
Query: 832 aagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagcttgaccctggaat 891
||||||||||| ||||||||||| || |||||||||||||||||||||| ||||||||||
Sbjct: 444 aagacaaaaactatgtctcctgtcactgtatcaggagcttcatcagcttcaccctggaat 385
Query: 892 acaatcttttggttatgttgcattcctttctccacatgaacctctaacaccttcttctcc 951
|||||||||||| ||||||||| | ||||||||||||||||| || ||||||||||||
Sbjct: 384 acaatcttttggccatgttgcatagccttctccacatgaacctccaagaccttcttctcc 325
Query: 952 tggactaccttgtttcctttacagcttgggcatttgtccttgtcacttatgatctcacct 1011
||| ||| ||||| ||| | |||||||||||| | |||||||||||||| ||||| |||
Sbjct: 324 tgggttactttgttgcctctgcagcttgggcatctatccttgtcacttatcatctcgcct 265
Query: 1012 gatcctttgcattcagggcaaacagtgttcatctgttggatcatgccaaggcctatctgt 1071
|||||| ||||||||||||||||||| ||||||||||||||||||||| | |||||||||
Sbjct: 264 gatcctctgcattcagggcaaacagtattcatctgttggatcatgccaggtcctatctgt 205
Query: 1072 cttgtgattgttctcattccagcaccacgacaaccatggcatgttcctgatgccccactc 1131
||||| || | |||||||| |||||||| |||||| ||| || | ||||||||||||
Sbjct: 204 cttgttatcatcctcattcctgcaccacggcaaccactgcaagtagccgatgccccactc 145
Query: 1132 ttggatcctttccccttgcacttggagcacaaagcactccgcgataaagatagtttcttg 1191
||||||||||| |||||||| || || | | || |||| |||||||||||||| |||
Sbjct: 144 ttggatcctttacccttgcattttccacaaagaacattccgtgataaagatagttttttg 85
Query: 1192 gttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcaccacatcttcacca 1251
|| | ||||||||||| || || || ||||||||||| |||||||||||||||||||||
Sbjct: 84 gtagcaccattgtacaggtcttccaacgaaaccttcatggtatgcaccacatcttcacca 25
Query: 1252 cgcttttgtctgcg 1265
||||||||| ||||
Sbjct: 24 cgcttttgtttgcg 11
>gb|BU990375.1|BU990375 HF24N12r HF Hordeum vulgare subsp. vulgare cDNA clone HF24N12
5-PRIME, mRNA sequence
Length = 682
Score = 484 bits (244), Expect = e-135
Identities = 457/528 (86%)
Strand = Plus / Minus
Query: 763 agagagattgtgtgctcaacatataagtcatcgtacatcctcttaaattttggatggtct 822
|||||||| || |||||||| | | |||||| || ||||||| |||||||| || |||
Sbjct: 681 agagagatcgtatgctcaacgaacaggtcatccgacttcctcttgaattttgggtgctct 622
Query: 823 ttaagttgcaagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagcttga 882
|||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| |
Sbjct: 621 ttaagttgcaagacaaaaactatgtctcctgtcactgtatcaggagcttcatcagcttca 562
Query: 883 ccctggaatacaatcttttggttatgttgcattcctttctccacatgaacctctaacacc 942
||||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||
Sbjct: 561 ccctggaatacaatcttttggccatgttgcattcccttctccacatgaacctccaagacc 502
Query: 943 ttcttctcctggactaccttgtttcctttacagcttgggcatttgtccttgtcacttatg 1002
|||||||||||| ||| ||||| ||| | |||||||||||| | ||||||||||||||
Sbjct: 501 ttcttctcctgggttactttgttgcctctgcagcttgggcatctatccttgtcacttatc 442
Query: 1003 atctcacctgatcctttgcattcagggcaaacagtgttcatctgttggatcatgccaagg 1062
||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 441 atctcgcctgatcctctgcattcagggcaaacagtattcatctgttggatcatgccaggt 382
Query: 1063 cctatctgtcttgtgattgttctcattccagcaccacgacaaccatggcatgttcctgat 1122
|||||||||||||| || | |||||||| |||||||| |||||| ||| || | |||
Sbjct: 381 cctatctgtcttgttatcatcctcattcctgcaccacggcaaccactgcaagtagccgat 322
Query: 1123 gccccactcttggatcctttccccttgcacttggagcacaaagcactccgcgataaagat 1182
|||||||||||||||||||| |||||||| || || | | || |||| |||||||||
Sbjct: 321 gccccactcttggatcctttacccttgcattttccacaaagaacattccgtgataaagat 262
Query: 1183 agtttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcaccaca 1242
||||| ||||| | ||||||||||| || || || ||||||||||| ||||||||||||
Sbjct: 261 agttttttggtagcaccattgtacaggtcttccaacgaaaccttcatggtatgcaccaca 202
Query: 1243 tcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaaag 1290
||||||||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 201 tcttcaccacgcttttgtctgcgtcctctcgagctgcccccgccaaag 154
Score = 107 bits (54), Expect = 1e-021
Identities = 105/122 (86%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 132 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 73
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 72 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 13
Query: 1429 ac 1430
||
Sbjct: 12 ac 11
>gb|BF260166.2|BF260166 HVSMEf0021E13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021E13f, mRNA sequence
Length = 546
Score = 480 bits (242), Expect = e-134
Identities = 470/546 (86%)
Strand = Plus / Minus
Query: 710 gtcgcccatcaagatgagtaagaacaaactggaagccacacaatgcttcggtgagagaga 769
|||| ||||||||||| || |||||||||||||||||||| | || || || |||||||
Sbjct: 546 gtcggccatcaagatgggtcagaacaaactggaagccacagagcgcctcagtcagagaga 487
Query: 770 ttgtgtgctcaacatataagtcatcgtacatcctcttaaattttggatggtctttaagtt 829
| || |||||||| | | |||||| || ||||||| |||||||| || ||||||||||
Sbjct: 486 tcgtatgctcaacgaacaggtcatccgacttcctcttgaattttgggtgctctttaagtt 427
Query: 830 gcaagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagcttgaccctgga 889
||||||||||||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct: 426 gcaagacaaaaactatgtctcctgtcactgtatcaggagcttcatcagcttcaccctgga 367
Query: 890 atacaatcttttggttatgttgcattcctttctccacatgaacctctaacaccttcttct 949
|||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||||
Sbjct: 366 atacaatcttttggccatgttgcattcccttctccacatgaacctccaagaccttcttct 307
Query: 950 cctggactaccttgtttcctttacagcttgggcatttgtccttgtcacttatgatctcac 1009
||||| ||| ||||| ||| | |||||||||||| | |||||||||||||| ||||| |
Sbjct: 306 cctgggttactttgttgcctctgcagcttgggcatctatccttgtcacttatcatctcgc 247
Query: 1010 ctgatcctttgcattcagggcaaacagtgttcatctgttggatcatgccaaggcctatct 1069
|||||||| ||||||||||||||||||| ||||||||||||||||||||| | |||||||
Sbjct: 246 ctgatcctctgcattcagggcaaacagtattcatctgttggatcatgccaggtcctatct 187
Query: 1070 gtcttgtgattgttctcattccagcaccacgacaaccatggcatgttcctgatgccccac 1129
||||||| || | |||||||| |||||||| |||||| ||| || | ||||||||||
Sbjct: 186 gtcttgttatcatcctcattcctgcaccacggcaaccactgcaagtagccgatgccccac 127
Query: 1130 tcttggatcctttccccttgcacttggagcacaaagcactccgcgataaagatagtttct 1189
||||||||||||| |||||||| || || | | || |||| |||||||||||||| |
Sbjct: 126 tcttggatcctttacccttgcattttccacaaagaacattccgtgataaagatagttttt 67
Query: 1190 tggttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcaccacatcttcac 1249
|||| | ||||||||||| || || || ||||||||||| |||||||||||||||||||
Sbjct: 66 tggtagcaccattgtacaggtcttccaacgaaaccttcatggtatgcaccacatcttcac 7
Query: 1250 cacgct 1255
||||||
Sbjct: 6 cacgct 1
>gb|CA011986.1|CA011986 HT04B17r HT Hordeum vulgare subsp. vulgare cDNA clone HT04B17
5-PRIME, mRNA sequence
Length = 650
Score = 474 bits (239), Expect = e-132
Identities = 521/615 (84%)
Strand = Plus / Minus
Query: 418 tgctgcctgcgcctcatctcctcttctatgttgacatcgtgaagggtggtctcctcgcac 477
||||||||||| |||||||||||||||||||| || ||||| | ||| || |||||||||
Sbjct: 625 tgctgcctgcgtctcatctcctcttctatgttcacgtcgtgcatggtcgtttcctcgcac 566
Query: 478 tggtccagctccatgtccgacagttggctccctggtttcggcggaaggatcttctccaac 537
|| |||| |||||||||||| |||||||||||| | ||||| ||||||||||| |
Sbjct: 565 tgatccacgtccatgtccgacgactggctccctggtcttggcggcaggatcttctcaagt 506
Query: 538 gaacggcactgggcaggggagagcacaccaggctcgggaaactccacgttgaattcaaca 597
|| ||| ||| ||||| || || |||||||| || |||||||| |||| || ||
Sbjct: 505 gacttgcattggctaggggtcagtactccaggctcagggaactccacactgaactcgacg 446
Query: 598 aacagacgacccttcatgaaaggacggccatgctgaggcataccttcatcgttaatggcc 657
||||| ||||||||||||||||| ||||||||||||||||| || || || || ||||||
Sbjct: 445 aacaggcgacccttcatgaaaggccggccatgctgaggcatgccctcgtcatttatggcc 386
Query: 658 ttgtgttgacctggtttaataacctccccggggtcagatttgatcagaagctgtcgccca 717
||||| ||||| || || || | |||||| || | |||||||||||||||||||| |||
Sbjct: 385 ttgtgctgaccaggctttatgatctccccaggattggatttgatcagaagctgtcggcca 326
Query: 718 tcaagatgagtaagaacaaactggaagccacacaatgcttcggtgagagagattgtgtgc 777
|||||||| || |||||||||||||||||||| | || || || |||||||| || |||
Sbjct: 325 tcaagatgggtcagaacaaactggaagccacagagcgcctcagtcagagagatcgtatgc 266
Query: 778 tcaacatataagtcatcgtacatcctcttaaattttggatggtctttaagttgcaagaca 837
||||| | | |||||| || ||||||| |||||||| || ||||||||||||||||||
Sbjct: 265 tcaacgaacaggtcatccgacttcctcttgaattttgggtgctctttaagttgcaagaca 206
Query: 838 aaaacaatgtctcctgtaaccgtatcaggagcttcatcagcttgaccctggaatacaatc 897
||||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 aaaactatgtctcctgtcactgtatcaggagcttcatcagcttcaccctggaatacaatc 146
Query: 898 ttttggttatgttgcattcctttctccacatgaacctctaacaccttcttctcctggact 957
|||||| |||||||||||| ||||||||||||||||| || ||||||||||||||| |
Sbjct: 145 ttttggccatgttgcattcccttctccacatgaacctccaagaccttcttctcctgggtt 86
Query: 958 accttgtttcctttacagcttgggcatttgtccttgtcacttatgatctcacctgatcct 1017
|| ||||| ||| | |||||||||||| | |||||||||||||| ||||| |||||||||
Sbjct: 85 actttgttgcctctgcagcttgggcatctatccttgtcacttatcatctcgcctgatcct 26
Query: 1018 ttgcattcagggcaa 1032
||||||||||||||
Sbjct: 25 ctgcattcagggcaa 11
>gb|BJ544004.1|BJ544004 BJ544004 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak17j20 5', mRNA sequence
Length = 543
Score = 474 bits (239), Expect = e-132
Identities = 440/507 (86%)
Strand = Plus / Minus
Query: 565 ccaggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacgg 624
|||||||| || ||||||||| |||| || || ||||| ||||||||||||||||| |||
Sbjct: 534 ccaggctcagggaactccacgctgaagtcgacgaacaggcgacccttcatgaaaggccgg 475
Query: 625 ccatgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctcc 684
|||||||||||||| || || || || ||||||||||| ||||| || || || | ||||
Sbjct: 474 ccatgctgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcc 415
Query: 685 ccggggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactggaag 744
|| || | |||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 414 ccaggattggatttgatcagaagctgtcggccatcaagatgggtcagaacaaactggaag 355
Query: 745 ccacacaatgcttcggtgagagagattgtgtgctcaacatataagtcatcgtacatcctc 804
||||| | || || || |||||||| || |||||||| | | |||||| || |||||
Sbjct: 354 ccacagagcgcctcagtcagagagatcgtatgctcaacgaacaggtcatccgacttcctc 295
Query: 805 ttaaattttggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccgtatca 864
|| |||||||| || ||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 294 ttgaattttgggtgctctttaagttgcaagacaaaaactatgtctcctgtcactgtatca 235
Query: 865 ggagcttcatcagcttgaccctggaatacaatcttttggttatgttgcattcctttctcc 924
|||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 234 ggagcttcatcagcttcaccctggaatacaatcttttggccatgttgcattcccttctcc 175
Query: 925 acatgaacctctaacaccttcttctcctggactaccttgtttcctttacagcttgggcat 984
||||||||||| || ||||||||||||||| ||| ||||| ||| | ||||||||||||
Sbjct: 174 acatgaacctccaagaccttcttctcctgggttactttgttgcctctgcagcttgggcat 115
Query: 985 ttgtccttgtcacttatgatctcacctgatcctttgcattcagggcaaacagtgttcatc 1044
| |||||||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||
Sbjct: 114 ctatccttgtcacttatcatctcgcctgatcctctgcattcagggcaaacagtattcatc 55
Query: 1045 tgttggatcatgccaaggcctatctgt 1071
||||||||||||||| | |||||||||
Sbjct: 54 tgttggatcatgccaggtcctatctgt 28
>gb|AV913940.1|AV913940 AV913940 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23n08 5', mRNA sequence
Length = 590
Score = 444 bits (224), Expect = e-123
Identities = 458/536 (85%)
Strand = Plus / Minus
Query: 565 ccaggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacgg 624
|||||||| || ||||||||| |||| || || ||||| ||||||||||||||||| |||
Sbjct: 548 ccaggctcagggaactccacgctgaactcgacgaacaggcgacccttcatgaaaggccgg 489
Query: 625 ccatgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctcc 684
|||||| ||||||| || || || || ||||||||||| ||||| || || || | ||||
Sbjct: 488 ccatgccgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcc 429
Query: 685 ccggggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactggaag 744
|| || | |||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 428 ccaggattggatttgatcagaagctgtcgaccatcaagatgggtcagaacaaactggaag 369
Query: 745 ccacacaatgcttcggtgagagagattgtgtgctcaacatataagtcatcgtacatcctc 804
||||| | || || || |||||||| | |||||||| | | |||||| || |||||
Sbjct: 368 ccacagagagcctcagtcagagagatcgcatgctcaacgaacaggtcatccgacttcctc 309
Query: 805 ttaaattttggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccgtatca 864
|| |||||||| || ||||||||||||||||||| ||| ||||||||||| || ||||||
Sbjct: 308 ttgaattttgggtgctctttaagttgcaagacaacaactatgtctcctgttactgtatca 249
Query: 865 ggagcttcatcagcttgaccctggaatacaatcttttggttatgttgcattcctttctcc 924
|||||||||||||||| |||||||||||| ||||||||| |||||||||||| ||||||
Sbjct: 248 ggagcttcatcagcttcaccctggaatacgatcttttggccatgttgcattcccttctcc 189
Query: 925 acatgaacctctaacaccttcttctcctggactaccttgtttcctttacagcttgggcat 984
||||||||||| || ||||| ||||||||| ||| ||||| ||| | || |||||||||
Sbjct: 188 acatgaacctccaagacctttttctcctgggttactttgttgcctctgcaacttgggcat 129
Query: 985 ttgtccttgtcacttatgatctcacctgatcctttgcattcagggcaaacagtgttcatc 1044
| |||||||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||
Sbjct: 128 ctatccttgtcacttatcatctcgcctgatcctctgcattcagggcaaacagtattcatc 69
Query: 1045 tgttggatcatgccaaggcctatctgtcttgtgattgttctcattccagcaccacg 1100
||||||||||||||| | |||||||||||||| || | |||||||| ||||||||
Sbjct: 68 tgttggatcatgccaggtcctatctgtcttgttatcatcctcattcctgcaccacg 13
>gb|BJ544857.1|BJ544857 BJ544857 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak39b08 5', mRNA sequence
Length = 635
Score = 402 bits (203), Expect = e-110
Identities = 470/559 (84%)
Strand = Plus / Minus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 560 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 501
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| || ||||||||||| |||| |||||||||||| ||||||
Sbjct: 500 ttcacgtcgtgcatggtcgtttcctcgcactgatccacgtccatgtccgacgactggctc 441
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 440 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 381
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || ||||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 380 ggctcagggaactccacgctgaagtcgacgaacaggcgacccttcatgaaaggccggcca 321
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||||||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 320 tgctgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcccca 261
Query: 688 gggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactggaagcca 747
|| | |||||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 260 ggattggatttgatcagaagctgtcggccatcaagatgggtcagaacaaactggaagcca 201
Query: 748 cacaatgcttcggtgagagagattgtgtgctcaacatataagtcatcgtacatcctctta 807
|| | || || || |||||||| || |||||||| | | |||||| || |||||||
Sbjct: 200 cagagcgcctcagtcagagagatcgtatgctcaacgaacaggtcatccgacttcctcttg 141
Query: 808 aattttggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccgtatcagga 867
|||||||| || ||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 140 aattttgggtgctctttaagttgcaagacaaaaactatgtctcctgtcactgtatcagga 81
Query: 868 gcttcatcagcttgaccctggaatacaatcttttggttatgttgcattcctttctccaca 927
||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 80 gcttcatcagcttcaccctggaatacaatcttttggccatgttgcattcccttctccaca 21
Query: 928 tgaacctctaacaccttct 946
|||||||| || |||||||
Sbjct: 20 tgaacctccaagaccttct 2
>gb|BE216076.2|BE216076 HV_CEb0009F11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009F11f, mRNA sequence
Length = 556
Score = 394 bits (199), Expect = e-108
Identities = 432/510 (84%)
Strand = Plus / Minus
Query: 633 aggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccggggtc 692
|||||| ||||| || || ||||| ||||| ||||| || || || | |||||| || |
Sbjct: 556 aggcatgccttcgtcatttatggctttgtgctgaccaggctttatgatctccccaggatg 497
Query: 693 agatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactggaagccacacaa 752
|||||||||||||||||||| ||||||||||| || |||||||||||||||||||| |
Sbjct: 496 ggatttgatcagaagctgtcgaccatcaagatgggtcagaacaaactggaagccacagag 437
Query: 753 tgcttcggtgagagagattgtgtgctcaacatataagtcatcgtacatcctcttaaattt 812
|| || || |||||||| | |||||||| | | |||||| || ||||||| |||||
Sbjct: 436 agcctcagtcagagagatcgcatgctcaacgaacaggtcatccgacttcctcttgaattt 377
Query: 813 tggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccgtatcaggagcttc 872
||| || ||||||||||||||||||| ||| ||||||||||| || ||||||||||||||
Sbjct: 376 tgggtgctctttaagttgcaagacaacaactatgtctcctgttactgtatcaggagcttc 317
Query: 873 atcagcttgaccctggaatacaatcttttggttatgttgcattcctttctccacatgaac 932
|||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||||||
Sbjct: 316 atcagcttcaccctggaatacgatcttttggccatgttgcattcccttctccacatgaac 257
Query: 933 ctctaacaccttcttctcctggactaccttgtttcctttacagcttgggcatttgtcctt 992
||| || ||||| ||||||||| ||| ||||| ||| | || ||||||||| | |||||
Sbjct: 256 ctccaagacctttttctcctgggttactttgttgcctctgcaacttgggcatctatcctt 197
Query: 993 gtcacttatgatctcacctgatcctttgcattcagggcaaacagtgttcatctgttggat 1052
||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 196 gtcacttatcatctcgcctgatcctctgcattcagggcaaacagtattcatctgttggat 137
Query: 1053 catgccaaggcctatctgtcttgtgattgttctcattccagcaccacgacaaccatggca 1112
||||||| | |||||||||||||| || | ||||||| |||||||| ||| || |||
Sbjct: 136 catgccaggtcctatctgtcttgttatcatcctcattcntgcaccacggcaagcactgca 77
Query: 1113 tgttcctgatgccccactcttggatccttt 1142
|| | |||||||||||||||||||||||
Sbjct: 76 agtagccgatgccccactcttggatccttt 47
>gb|CA027033.1|CA027033 HZ57L06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57L06
5-PRIME, mRNA sequence
Length = 482
Score = 357 bits (180), Expect = 8e-097
Identities = 360/420 (85%)
Strand = Plus / Minus
Query: 565 ccaggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacgg 624
|||||||| || |||||||| |||| || || ||||| ||||||||||||||||| |||
Sbjct: 436 ccaggctcagggaactccacactgaactcgacgaacaggcgacccttcatgaaaggccgg 377
Query: 625 ccatgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctcc 684
|||||||||||||| || || || || ||||||||||| ||||| || || || | ||||
Sbjct: 376 ccatgctgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcc 317
Query: 685 ccggggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactggaag 744
|| || | |||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 316 ccaggattggatttgatcagaagctgtcggccatcaagatgggtcagaacaaactggaag 257
Query: 745 ccacacaatgcttcggtgagagagattgtgtgctcaacatataagtcatcgtacatcctc 804
||||| | || || || |||||||| || |||||||| | | |||||| || |||||
Sbjct: 256 ccacagagcgcctcagtcagagagatcgtatgctcaacgaacaggtcatccgacttcctc 197
Query: 805 ttaaattttggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccgtatca 864
|| |||||||| || ||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 196 ttgaattttgggtgctctttaagttgcaagacaaaaactatgtctcctgtcactgtatca 137
Query: 865 ggagcttcatcagcttgaccctggaatacaatcttttggttatgttgcattcctttctcc 924
|||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 136 ggagcttcatcagcttcaccctggaatacaatcttttggccatgttgcattcccttctcc 77
Query: 925 acatgaacctctaacaccttcttctcctggactaccttgtttcctttacagcttgggcat 984
||||||||||| || ||||||||||||||| ||| ||||| ||| | ||||||||||||
Sbjct: 76 acatgaacctccaagaccttcttctcctgggttactttgttgcctctgcagcttgggcat 17
>gb|AW983459.2|AW983459 HVSMEg0010L09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010L09f, mRNA sequence
Length = 865
Score = 351 bits (177), Expect = 5e-095
Identities = 429/513 (83%)
Strand = Plus / Minus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 513 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 454
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| || ||||||||||| |||| |||||||||||| ||||||
Sbjct: 453 ttcacgtcgtgcatggtcgtttcctcgcactgatccacgtccatgtccgacgactggctc 394
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 393 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 334
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || ||||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 333 ggctcagggaactccacgctgaactcgacgaacaggcgacccttcatgaaaggccggcca 274
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||||||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 273 tgctgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcccca 214
Query: 688 gggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactggaagcca 747
|| | |||||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 213 ggattggatttgatcagaagctgtcggccatcaagatgggtcagaacaaactggaagcca 154
Query: 748 cacaatgcttcggtgagagagattgtgtgctcaacatataagtcatcgtacatcctctta 807
|| | || || || |||||||| || |||||||| | | |||||| || |||||||
Sbjct: 153 cagagcgcctcagtcagagagatcgtatgctcaacgaacaggtcatccgacttcctcttg 94
Query: 808 aattttggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccgtatcagga 867
|||||||| || ||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 93 aattttgggtgctctttaagttgcaagacaaaaactatgtctcctgtcactgtatcagga 34
Query: 868 gcttcatcagcttgaccctggaatacaatcttt 900
||||||||||||| |||||||||||||||||||
Sbjct: 33 gcttcatcagcttcaccctggaatacaatcttt 1
>gb|BG414677.1|BG414677 HVSMEk0003F07f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0003F07f, mRNA sequence
Length = 624
Score = 339 bits (171), Expect = 2e-091
Identities = 396/471 (84%)
Strand = Plus / Minus
Query: 820 tctttaagttgcaagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagct 879
||||||||||||||| ||||| ||||||||||| | | |||||||||||||||||
Sbjct: 473 tctttaagttgcaagcaaaaaagtatgtctcctgtcaatgattcaggagcttcatcagcg 414
Query: 880 tgaccctggaatacaatcttttggttatgttgcattcctttctccacatgaacctctaac 939
| ||| |||||| ||||||||||| |||||||||||| |||||||||||||| || ||
Sbjct: 413 tcaccttggaattcaatcttttggccatgttgcattccgttctccacatgaacttccaag 354
Query: 940 accttcttctcctggactaccttgtttcctttacagcttgggcatttgtccttgtcactt 999
|| ||||| |||||| || ||||| | | | |||||||||||| | ||||||||||||
Sbjct: 353 acattcttatcctgggtaactttgttgcgtctgcagcttgggcatctatccttgtcactt 294
Query: 1000 atgatctcacctgatcctttgcattcagggcaaacagtgttcatctgttggatcatgcca 1059
|| || || ||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 293 atcatatcgcctgatcctctgcattcagggcaaacagtattcatctgttggatcatgcca 234
Query: 1060 aggcctatctgtcttgtgattgttctcattccagcaccacgacaaccatggcatgttcct 1119
| |||||||||||||| || | ||||||| |||||||| |||||| ||| || |
Sbjct: 233 ggtcctatctgtcttgttatcatcctcattcatgcaccacggcaaccactgcaagtagcc 174
Query: 1120 gatgccccactcttggatcctttccccttgcacttggagcacaaagcactccgcgataaa 1179
||||||||||||||||||||||| |||||||| || || | | || |||| ||||||
Sbjct: 173 gatgccccactcttggatcctttacccttgcattttccacaaagaacattccgtgataaa 114
Query: 1180 gatagtttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcacc 1239
|||||||| ||||| | ||||||||||| || || || ||||||||||| |||||||||
Sbjct: 113 gatagttttttggtagcaccattgtacaggtcttccaacgaaaccttcatggtatgcacc 54
Query: 1240 acatcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaaag 1290
|||||||||||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 53 acatcttcaccacgcttttgtctgcgtcctctcgagctgcccccgccaaag 3
>gb|BQ464485.1|BQ464485 HF02G16r HF Hordeum vulgare subsp. vulgare cDNA clone HF02G16
5-PRIME, mRNA sequence
Length = 589
Score = 339 bits (171), Expect = 2e-091
Identities = 300/343 (87%)
Strand = Plus / Minus
Query: 800 tcctcttaaattttggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccg 859
||||||| |||||||| || ||||||||||||||||||| ||| ||||||||||| || |
Sbjct: 544 tcctcttgaattttgggtgctctttaagttgcaagacaacaactatgtctcctgttactg 485
Query: 860 tatcaggagcttcatcagcttgaccctggaatacaatcttttggttatgttgcattcctt 919
||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| |
Sbjct: 484 tatcaggagcttcatcagcttcaccctggaatacgatcttttggccatgttgcattccct 425
Query: 920 tctccacatgaacctctaacaccttcttctcctggactaccttgtttcctttacagcttg 979
|||||||||||||||| || ||||| ||||||||| ||| ||||| ||| | || ||||
Sbjct: 424 tctccacatgaacctccaagacctttttctcctgggttactttgttgcctctgcaacttg 365
Query: 980 ggcatttgtccttgtcacttatgatctcacctgatcctttgcattcagggcaaacagtgt 1039
||||| | |||||||||||||| ||||| ||||||||| ||||||||||||||||||| |
Sbjct: 364 ggcatctatccttgtcacttatcatctcgcctgatcctctgcattcagggcaaacagtat 305
Query: 1040 tcatctgttggatcatgccaaggcctatctgtcttgtgattgttctcattccagcaccac 1099
|||||||||||||||||||| | |||||||||||||| || | |||||||| |||||||
Sbjct: 304 tcatctgttggatcatgccaggtcctatctgtcttgttatcatcctcattcctgcaccac 245
Query: 1100 gacaaccatggcatgttcctgatgccccactcttggatccttt 1142
| ||| || ||| || | |||||||||||||||||||||||
Sbjct: 244 ggcaagcactgcaagtagccgatgccccactcttggatccttt 202
>gb|BI950800.1|BI950800 HVSMEl0023D18f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0023D18f, mRNA sequence
Length = 535
Score = 309 bits (156), Expect = 2e-082
Identities = 389/467 (83%)
Strand = Plus / Minus
Query: 824 taagttgcaagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagcttgac 883
|||||||||| | ||||| ||||||||||| || |||||||||| ||||| || || ||
Sbjct: 492 taagttgcaaaaaaaaaaatatgtctcctgtcactgtatcaggagattcataagattcac 433
Query: 884 cctggaatacaatcttttggttatgttgcattcctttctccacatgaacctctaacacct 943
|||||||| |||||||||| |||||||||| | ||||||||||||||||| || ||||
Sbjct: 432 actggaataaaatcttttggccatgttgcatttccttctccacatgaacctccaagacct 373
Query: 944 tcttctcctggactaccttgtttcctttacagcttgggcatttgtccttgtcacttatga 1003
||||||||||| ||| ||||| ||| | |||||||||||| | |||||||||||||| |
Sbjct: 372 tcttctcctgggttactttgttgcctctgcagcttgggcatntatccttgtcacttatca 313
Query: 1004 tctcacctgatcctttgcattcagggcaaacagtgttcatctgttggatcatgccaaggc 1063
| | ||||||||| ||||||||||||||||||| ||||||||||||||||||||| | |
Sbjct: 312 tatagcctgatcctctgcattcagggcaaacagtattcatctgttggatcatgccaggtc 253
Query: 1064 ctatctgtcttgtgattgttctcattccagcaccacgacaaccatggcatgttcctgatg 1123
| ||||||||||| || | ||||||| |||||| | |||||| ||| || | | |
Sbjct: 252 caatctgtcttgttatcatcgtcattcctgcaccagggcaaccactgcaagtagcccaag 193
Query: 1124 ccccactcttggatcctttccccttgcacttggagcacaaagcactccgcgataaagata 1183
||||||| ||||||||||| |||||||| || || | | || |||| ||||||||||
Sbjct: 192 ccccacttttggatcctttacccttgcattttccacaaagaacattccgtgataaagata 133
Query: 1184 gtttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcaccacat 1243
|||| ||||| | ||| ||||||| || || || ||||||||||| |||||||||||||
Sbjct: 132 gttttttggtagcaccaatgtacaggtcttccaacgaaaccttcatggtatgcaccacat 73
Query: 1244 cttcaccacgcttttgtctgcgtcctcttgagctaccacccccaaag 1290
||||||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 72 tttcaccacgcttttgtctgcgtcctctcgagctgcccccgccaaag 26
>gb|AL507409.1|AL507409 AL507409 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05H16V 5',
mRNA sequence
Length = 669
Score = 293 bits (148), Expect = 9e-078
Identities = 265/304 (87%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 405 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 346
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 345 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 286
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 285 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 226
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 225 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 166
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaac 1608
|||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 165 acaccaagcacctcgtaatacttggtgttgttgctagtcttccttggcatgcgtccaaac 106
Query: 1609 atgg 1612
||||
Sbjct: 105 atgg 102
Score = 165 bits (83), Expect = 6e-039
Identities = 204/243 (83%), Gaps = 1/243 (0%)
Strand = Plus / Minus
Query: 1049 ggatcatgccaaggcctatctgtcttgtgattgttctcattccagcaccacga-caacca 1107
||||||||||| | |||||||||||||| || | |||||||| |||||||| ||||||
Sbjct: 669 ggatcatgccaggtcctatctgtcttgttatcatcctcattcctgcaccacgggcaacca 610
Query: 1108 tggcatgttcctgatgccccactcttggatcctttccccttgcacttggagcacaaagca 1167
||| || | ||||||||||||||||||||||| |||||||| || || | | ||
Sbjct: 609 ctgcaagtagccgatgccccactcttggatcctttacccttgcattttccacaaagaaca 550
Query: 1168 ctccgcgataaagatagtttcttggttgtcccattgtacagatcgtctaaggaaaccttc 1227
|||| |||||||||||||| ||||| | ||||||||||| || || || |||||||||
Sbjct: 549 ttccgtgataaagatagttttttggtagcaccattgtacaggtcttccaacgaaaccttc 490
Query: 1228 atagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctaccaccccca 1287
|| ||||||||||||||||||||||||||||||||||||||||| ||||| || || |||
Sbjct: 489 atggtatgcaccacatcttcaccacgcttttgtctgcgtcctctcgagctgcccccgcca 430
Query: 1288 aag 1290
|||
Sbjct: 429 aag 427
>gb|BF623883.2|BF623883 HVSMEa0007H15f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0007H15f, mRNA sequence
Length = 494
Score = 293 bits (148), Expect = 9e-078
Identities = 265/304 (87%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 403 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 344
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 343 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 284
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 283 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 224
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 223 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 164
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaac 1608
|||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 163 acaccaagcacctcgtaatacttggtgttgttgctagtcttccttggcatgcgtccaaac 104
Query: 1609 atgg 1612
||||
Sbjct: 103 atgg 100
Score = 99.6 bits (50), Expect = 3e-019
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 1221 aaccttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctacc 1280
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 494 aaccttcatggtatgcaccacatcttcaccacgcttttgtctgcgtcctctcgagctgcc 435
Query: 1281 acccccaaag 1290
|| ||||||
Sbjct: 434 cccgccaaag 425
>gb|BI948616.1|BI948616 HVSMEl0010E07f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0010E07f, mRNA sequence
Length = 861
Score = 293 bits (148), Expect = 9e-078
Identities = 265/304 (87%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 398 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 339
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 338 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 279
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 278 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 219
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 218 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 159
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaac 1608
|||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 158 acaccaagcacctcgtaatacttggtgttgttgctagtcttccttggcatgcgtccaaac 99
Query: 1609 atgg 1612
||||
Sbjct: 98 atgg 95
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1220 aaaccttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctac 1279
|||| ||||| ||| || || ||| ||||||||||||||||||| ||||||| ||||| |
Sbjct: 490 aaactttcatggtacgccccccatattcaccacgcttttgtctgagtcctctcgagctgc 431
Query: 1280 cacccccaaag 1290
| || ||||||
Sbjct: 430 ccccgccaaag 420
>gb|BI950265.1|BI950265 HVSMEl0020A13f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0020A13f, mRNA sequence
Length = 468
Score = 293 bits (148), Expect = 9e-078
Identities = 265/304 (87%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 381 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 322
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 321 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 262
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 202
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 201 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 142
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaac 1608
|||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 141 acaccaagcacctcgtaatacttggtgttgttgctagtcttccttggcatgcgtccaaac 82
Query: 1609 atgg 1612
||||
Sbjct: 81 atgg 78
Score = 91.7 bits (46), Expect = 7e-017
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 1225 ttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctaccaccc 1284
||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 468 ttcatggtatgcaccacatcttcaccacgcttttgtctgcgtcctctcgagctgcccccg 409
Query: 1285 ccaaag 1290
||||||
Sbjct: 408 ccaaag 403
>gb|BG368299.2|BG368299 HVSMEi0017H23f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0017H23f, mRNA sequence
Length = 750
Score = 293 bits (148), Expect = 9e-078
Identities = 265/304 (87%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 386 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 327
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 326 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 267
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 266 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 207
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 206 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 147
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaac 1608
|||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 146 acaccaagcacctcgtaatacttggtgttgttgctagtcttccttggcatgcgtccaaac 87
Query: 1609 atgg 1612
||||
Sbjct: 86 atgg 83
Score = 186 bits (94), Expect = 2e-045
Identities = 229/274 (83%)
Strand = Plus / Minus
Query: 1017 tttgcattcagggcaaacagtgttcatctgttggatcatgccaaggcctatctgtcttgt 1076
|||||||| ||||||||||| |||||||||||||||| || | | || |||||||||||
Sbjct: 681 tttgcattaagggcaaacaggattcatctgttggatcaagcaaggtcccatctgtcttgt 622
Query: 1077 gattgttctcattccagcaccacgacaaccatggcatgttcctgatgccccactcttgga 1136
|| | |||| ||| |||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 621 aataatcctcaatcctgcaccacggcaaccattgaaagtagccgatgccccactcttgga 562
Query: 1137 tcctttccccttgcacttggagcacaaagcactccgcgataaagatagtttcttggttgt 1196
|||||| |||||||| || || | | || |||| |||||||||||||| ||||| |
Sbjct: 561 tcctttacccttgcattttccacaaagaacattccgtgataaagatagttttttggtagc 502
Query: 1197 cccattgtacagatcgtctaaggaaaccttcatagtatgcaccacatcttcaccacgctt 1256
||||||||||| || || || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 accattgtacaggtcttccaacgaaaccttcatggtatgcaccacatcttcaccacgctt 442
Query: 1257 ttgtctgcgtcctcttgagctaccacccccaaag 1290
||||||||||||||| ||||| || || ||||||
Sbjct: 441 ttgtctgcgtcctctcgagctgcccccgccaaag 408
>gb|BM816720.1|BM816720 HC114E01_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC114E01_SK.ab1 similar to DNAJ PROTEIN HOMOLOG 2
gi|542196|pir|S42031 LDJ2 protein - leek
gi|454303|emb|CAA54720.1| (X77632) LDJ2 [Allium porrum],
mRNA sequence
Length = 860
Score = 293 bits (148), Expect = 9e-078
Identities = 265/304 (87%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 423 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 364
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 363 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 304
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 303 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 244
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 243 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 184
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaac 1608
|||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 183 acaccaagcacctcgtaatacttggtgttgttgctagtcttccttggcatgcgtccaaac 124
Query: 1609 atgg 1612
||||
Sbjct: 123 atgg 120
Score = 226 bits (114), Expect = 2e-057
Identities = 269/319 (84%), Gaps = 2/319 (0%)
Strand = Plus / Minus
Query: 973 cagcttgggcatttgtccttgtcacttatgatctcacctgatcctttgcattca-gggca 1031
|||||||||||| | |||||||||||||| ||||| | ||||| | |||||||| |||||
Sbjct: 762 cagcttgggcatctatccttgtcacttatcatctcgcntgatc-tctgcattcaagggca 704
Query: 1032 aacagtgttcatctgttggatcatgccaaggcctatctgtcttgtgattgttctcattcc 1091
|||||| ||||||||||||||||||||| | ||||||||||| | || | |||||||
Sbjct: 703 aacagtattcatctgttggatcatgccaggtcctatctgtctgnttatcatcntcattcc 644
Query: 1092 agcaccacgacaaccatggcatgttcctgatgccccactcttggatcctttccccttgca 1151
|||||||| |||||| ||| || | ||||||||||||||||||||||| ||||||||
Sbjct: 643 tgcaccacggcaaccactgcaagtagccgatgccccactcttggatcctttacccttgca 584
Query: 1152 cttggagcacaaagcactccgcgataaagatagtttcttggttgtcccattgtacagatc 1211
|| || | | || |||| |||||||||||||| ||||| | ||||||||||| ||
Sbjct: 583 ttttccacaaagaacattccgtgataaagatagttttttggtagcaccattgtacaggtc 524
Query: 1212 gtctaaggaaaccttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctct 1271
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ttccaacgaaaccttcatggtatgcaccacatcttcaccacgcttttgtctgcgtcctct 464
Query: 1272 tgagctaccacccccaaag 1290
||||| || || ||||||
Sbjct: 463 cgagctgcccccgccaaag 445
>gb|BQ460721.1|BQ460721 HA06B20r HA Hordeum vulgare subsp. vulgare cDNA clone HA06B20
5-PRIME, mRNA sequence
Length = 650
Score = 293 bits (148), Expect = 9e-078
Identities = 265/304 (87%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 391 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 332
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 331 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 272
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 271 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 212
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 211 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 152
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaac 1608
|||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 151 acaccaagcacctcgtaatacttggtgttgttgctagtcttccttggcatgcgtccaaac 92
Query: 1609 atgg 1612
||||
Sbjct: 91 atgg 88
Score = 170 bits (86), Expect = 9e-041
Identities = 200/238 (84%)
Strand = Plus / Minus
Query: 1053 catgccaaggcctatctgtcttgtgattgttctcattccagcaccacgacaaccatggca 1112
||||||| | |||||||||||||| || | |||||||| |||||||| |||||| |||
Sbjct: 650 catgccaggtcctatctgtcttgttatcatcctcattcctgcaccacggcaaccactgca 591
Query: 1113 tgttcctgatgccccactcttggatcctttccccttgcacttggagcacaaagcactccg 1172
|| | ||||||||||||||||||||||| |||||||| || || | | || ||||
Sbjct: 590 agtagccgatgccccactcttggatcctttacccttgcattttccacaaagaacattccg 531
Query: 1173 cgataaagatagtttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagt 1232
|||||||||||||| ||||| | ||||||||||| || || || ||||||||||| ||
Sbjct: 530 tgataaagatagttttttggtagcaccattgtacaggtcttccaacgaaaccttcatggt 471
Query: 1233 atgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaaag 1290
||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 470 atgcaccacatcttcaccacgcttttgtctgcgtcctctcgagctgcccccgccaaag 413
>gb|BM368094.2|BM368094 EBed01_SQ002_C15_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_C15 5', mRNA sequence
Length = 481
Score = 293 bits (148), Expect = 9e-078
Identities = 265/304 (87%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 404 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 345
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 344 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 285
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 284 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 225
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 224 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 165
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaac 1608
|||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 164 acaccaagcacctcgtaatacttggtgttgttgctagtcttccttggcatgcgtccaaac 105
Query: 1609 atgg 1612
||||
Sbjct: 104 atgg 101
Score = 65.9 bits (33), Expect = 4e-009
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 1237 accacatcttcaccacgcttttgtctgcgtcctcttgagct 1277
|||||||||||||| |||||||||||||||||||| |||||
Sbjct: 481 accacatcttcaccccgcttttgtctgcgtcctctcgagct 441
>gb|CA029934.1|CA029934 HX05J22r HX Hordeum vulgare subsp. vulgare cDNA clone HX05J22
5-PRIME, mRNA sequence
Length = 700
Score = 293 bits (148), Expect = 9e-078
Identities = 265/304 (87%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 411 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 352
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 351 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 292
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 291 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 232
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 231 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 172
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaac 1608
|||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 171 acaccaagcacctcgtaatacttggtgttgttgctagtcttccttggcatgcgtccaaac 112
Query: 1609 atgg 1612
||||
Sbjct: 111 atgg 108
Score = 222 bits (112), Expect = 3e-056
Identities = 229/268 (85%)
Strand = Plus / Minus
Query: 1023 ttcagggcaaacagtgttcatctgttggatcatgccaaggcctatctgtcttgtgattgt 1082
||||||||||||||| ||||||||||||||||||||| | |||||||||||||| || |
Sbjct: 700 ttcagggcaaacagtattcatctgttggatcatgccaggtcctatctgtcttgttatcat 641
Query: 1083 tctcattccagcaccacgacaaccatggcatgttcctgatgccccactcttggatccttt 1142
|||||||| |||||||| |||||| ||| || | |||||||||||||||||||||||
Sbjct: 640 cctcattcctgcaccacggcaaccactgcaagtagccgatgccccactcttggatccttt 581
Query: 1143 ccccttgcacttggagcacaaagcactccgcgataaagatagtttcttggttgtcccatt 1202
|||||||| || || | | || |||| |||||||||||||| ||||| | |||||
Sbjct: 580 acccttgcattttccacaaagaacattccgtgataaagatagttttttggtagcaccatt 521
Query: 1203 gtacagatcgtctaaggaaaccttcatagtatgcaccacatcttcaccacgcttttgtct 1262
|||||| || || || ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 520 gtacaggtcttccaacgaaaccttcatggtatgcaccacatcttcaccacgcttttgtct 461
Query: 1263 gcgtcctcttgagctaccacccccaaag 1290
||||||||| ||||| || || ||||||
Sbjct: 460 gcgtcctctcgagctgcccccgccaaag 433
>gb|BU978698.1|BU978698 HA14A10r HA Hordeum vulgare subsp. vulgare cDNA clone HA14A10
5-PRIME, mRNA sequence
Length = 686
Score = 280 bits (141), Expect = 1e-073
Identities = 273/317 (86%)
Strand = Plus / Minus
Query: 974 agcttgggcatttgtccttgtcacttatgatctcacctgatcctttgcattcagggcaaa 1033
||||||||||| | |||||||||||||| ||||| ||||||||| |||||||||||||||
Sbjct: 686 agcttgggcatctatccttgtcacttatcatctcgcctgatcctctgcattcagggcaaa 627
Query: 1034 cagtgttcatctgttggatcatgccaaggcctatctgtcttgtgattgttctcattccag 1093
|||| ||||||||||||||||||||| | |||||||||||||| || | |||||||| |
Sbjct: 626 cagtattcatctgttggatcatgccaggtcctatctgtcttgttatcatcctcattcctg 567
Query: 1094 caccacgacaaccatggcatgttcctgatgccccactcttggatcctttccccttgcact 1153
||||||| |||||| ||| || | ||||||||||||||||||||||| |||||||| |
Sbjct: 566 caccacggcaaccactgcaagtagccgatgccccactcttggatcctttacccttgcatt 507
Query: 1154 tggagcacaaagcactccgcgataaagatagtttcttggttgtcccattgtacagatcgt 1213
| || | | || |||| |||||||||||||| ||||| | ||||||||||| || |
Sbjct: 506 ttccacaaagaacattccgtgataaagatagttttttggtagcaccattgtacaggtctt 447
Query: 1214 ctaaggaaaccttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttg 1273
| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 446 ccaacgaaaccttcatggtatgcaccacatcttcaccacgcttttgtctgcgtcctctcg 387
Query: 1274 agctaccacccccaaag 1290
|||| || || ||||||
Sbjct: 386 agctgcccccgccaaag 370
Score = 254 bits (128), Expect = 8e-066
Identities = 245/284 (86%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 348 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 289
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 288 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 229
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 228 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 169
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 168 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 109
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttcct 1592
|||||||| ||||||||||||||||| ||||| ||| |||||||
Sbjct: 108 acaccaagcacctcgtaatacttggtgttgttgctagtcttcct 65
>gb|BQ469755.1|BQ469755 HZ01M10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01M10
5-PRIME, mRNA sequence
Length = 547
Score = 278 bits (140), Expect = 6e-073
Identities = 272/316 (86%)
Strand = Plus / Minus
Query: 975 gcttgggcatttgtccttgtcacttatgatctcacctgatcctttgcattcagggcaaac 1034
|||||||||| | |||||||||||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 547 gcttgggcatctatccttgtcacttatcatctcgcctgatcctctgcattcagggcaaac 488
Query: 1035 agtgttcatctgttggatcatgccaaggcctatctgtcttgtgattgttctcattccagc 1094
||| ||||||||||||||||||||| | |||||||||||||| || | |||||||| ||
Sbjct: 487 agtattcatctgttggatcatgccaggtcctatctgtcttgttatcatcctcattcctgc 428
Query: 1095 accacgacaaccatggcatgttcctgatgccccactcttggatcctttccccttgcactt 1154
|||||| |||||| ||| || | ||||||||||||||||||||||| |||||||| ||
Sbjct: 427 accacggcaaccactgcaagtagccgatgccccactcttggatcctttacccttgcattt 368
Query: 1155 ggagcacaaagcactccgcgataaagatagtttcttggttgtcccattgtacagatcgtc 1214
|| | | || |||| |||||||||||||| ||||| | ||||||||||| || ||
Sbjct: 367 tccacaaagaacattccgtgataaagatagttttttggtagcaccattgtacaggtcttc 308
Query: 1215 taaggaaaccttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttga 1274
|| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 307 caacgaaaccttcatggtatgcaccacatcttcaccacgcttttgtctgcgtcctctcga 248
Query: 1275 gctaccacccccaaag 1290
||| || || ||||||
Sbjct: 247 gctgcccccgccaaag 232
Score = 202 bits (102), Expect = 3e-050
Identities = 183/210 (87%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 210 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 151
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 150 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 91
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 90 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 31
Query: 1489 ttttttatggcagcttttctgtatgctttc 1518
|||||||| |||||||| | ||| ||||||
Sbjct: 30 ttttttatagcagctttccggtaagctttc 1
>gb|BI949898.1|BI949898 HVSMEl0016N02f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0016N02f, mRNA sequence
Length = 529
Score = 272 bits (137), Expect = 3e-071
Identities = 262/304 (86%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||| || ||| |||||||| |||
Sbjct: 398 agttgttcaaatatgtcaaaggggctatgcatatcactgnggccgccgcctcccatccct 339
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 338 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 279
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 278 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 219
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 218 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 159
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaac 1608
|||||||| ||||||||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 158 acaccaagcacctcgtaatacttggtggtgttgctagtcttccttggcatgcgtccaaac 99
Query: 1609 atgg 1612
||||
Sbjct: 98 atgg 95
>gb|BG369741.2|BG369741 HVSMEi0025M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025M09f, mRNA sequence
Length = 742
Score = 266 bits (134), Expect = 2e-069
Identities = 269/314 (85%)
Strand = Plus / Minus
Query: 1299 acccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcc 1358
||||| ||| ||||| ||| |||||||||| |||||| | |||||| |||||| ||| ||
Sbjct: 424 acccgcaaatagttgttcacaaatgtcaaaggggctaggcaaatcaatgctgccgccgcc 365
Query: 1359 tcccattccttccttaagggcatcttctccatactggtcatagatctccctcttctccgg 1418
|||||| | ||| || || |||||||||||| | |||||||| || |||||||| || ||
Sbjct: 364 tcccatccgttctttcagtgcatcttctccaaattggtcataaatttccctcttttcagg 305
Query: 1419 gtcactaagaacatcataagcttgagacagctctttaaacttctcagggtctccaccctt 1478
|||| |||| ||||| |||||||| | || |||||||||||||||||||||||||||||
Sbjct: 304 gtcattaagtacatcgtaagcttgtgccaattctttaaacttctcagggtctccaccctt 245
Query: 1479 atcaggatggttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgc 1538
||||||||||||||||| |||||||| | ||| |||||||| | ||||||| | ||||
Sbjct: 244 gtcaggatggttttttatagcagctttccggtaagctttcttcaactcatccggggttgc 185
Query: 1539 ggtcttagacacaccaagaacctcgtaatacttggtattgttactactcttccttggcat 1598
||||| || |||||||| ||||||||||||||||| ||||| ||| |||||||||||||
Sbjct: 184 tgtcttggatacaccaagcacctcgtaatacttggtgttgttgctagtcttccttggcat 125
Query: 1599 gcgtccaaacatgg 1612
||||||||||||||
Sbjct: 124 gcgtccaaacatgg 111
>gb|CD662734.1|CD662734 UCRHV18_02dg12_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_02dg12, mRNA sequence
Length = 860
Score = 248 bits (125), Expect = 5e-064
Identities = 380/465 (81%)
Strand = Plus / Plus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 396 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 455
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| ||||| || ||||| |||| |||||||||||| ||||||
Sbjct: 456 ttcacgtcgtgcatggtcgtctcttcacactgatccacgtccatgtccgacgactggctc 515
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 516 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 575
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || ||||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 576 ggctcagggaactccacgctgaactcgacgaacaggcgacccttcatgaaaggccggcca 635
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||| ||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 636 tgccgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcccca 695
Query: 688 gggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactggaagcca 747
|| | |||||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 696 ggattggatttgatcagaagctgtcgaccatcaagatgggtcagaacaaactggaagcca 755
Query: 748 cacaatgcttcggtgagagagattgtgtgctcaacatataagtcatcgtacatcctctta 807
|| | || || || |||||||| | |||||||| | | |||||| || |||||||
Sbjct: 756 cagagagcctcagtcagagagatcgcatgctcaacgaacaggtcatccgacttcctcttg 815
Query: 808 aattttggatggtctttaagttgcaagacaaaaacaatgtctcct 852
|||||||| || ||||||||||||||||||| ||| |||||||||
Sbjct: 816 aattttgggtgctctttaagttgcaagacaacaactatgtctcct 860
>gb|CA008519.1|CA008519 HU11D12r HU Hordeum vulgare subsp. vulgare cDNA clone HU11D12
5-PRIME, mRNA sequence
Length = 292
Score = 234 bits (118), Expect = 7e-060
Identities = 244/286 (85%)
Strand = Plus / Minus
Query: 973 cagcttgggcatttgtccttgtcacttatgatctcacctgatcctttgcattcagggcaa 1032
|||||||||||| | |||||||| ||||| ||||| ||||||||| ||||||||||||||
Sbjct: 286 cagcttgggcatctatccttgtcgcttatcatctcgcctgatcctctgcattcagggcaa 227
Query: 1033 acagtgttcatctgttggatcatgccaaggcctatctgtcttgtgattgttctcattcca 1092
||||| |||||||||||||||||| || | |||||||||||||| || | ||||||||
Sbjct: 226 acagtattcatctgttggatcatggcaggtcctatctgtcttgttatcatcctcattcct 167
Query: 1093 gcaccacgacaaccatggcatgttcctgatgccccactcttggatcctttccccttgcac 1152
|||||||| |||||| ||| || | ||||||||||||||||||||||| ||||||||
Sbjct: 166 gcaccacggcaaccactgcaagtagccgatgccccactcttggatcctttacccttgcat 107
Query: 1153 ttggagcacaaagcactccgcgataaagatagtttcttggttgtcccattgtacagatcg 1212
|| || | | || |||| |||||||||||||| ||||| | ||||||||||| ||
Sbjct: 106 tttccacaaagaacattccgtgataaagatagttttttggtagcaccattgtacaggtct 47
Query: 1213 tctaaggaaaccttcatagtatgcaccacatcttcaccacgctttt 1258
|| || ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 46 tccaacgaaaccttcatggtatgcaccacatcttcaccacgctttt 1
>gb|BQ662213.1|BQ662213 HS01B18w HS Hordeum vulgare subsp. vulgare cDNA clone HS01B18
3-PRIME, mRNA sequence
Length = 646
Score = 232 bits (117), Expect = 3e-059
Identities = 366/449 (81%)
Strand = Plus / Plus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 198 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 257
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| ||||| || ||||| |||| |||||||||||| ||||||
Sbjct: 258 ttcacgtcgtgcatggtcgtctcttcacactgatccacgtccatgtccgacgactggctc 317
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 318 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 377
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || ||||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 378 ggctcagggaactccacgctgaactcgacgaacaggcgacccttcatgaaaggccggcca 437
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||| ||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 438 tgccgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcccca 497
Query: 688 gggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactggaagcca 747
|| | |||||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 498 ggattggatttgatcagaagctgtcgaccatcaagatgggtcagaacaaactggaagcca 557
Query: 748 cacaatgcttcggtgagagagattgtgtgctcaacatataagtcatcgtacatcctctta 807
|| | || || || |||||||| | |||||||| | | |||||| || |||||||
Sbjct: 558 cagagagcctcagtcagagagatcgcatgctcaacgaacaggtcatccgacttcctcttg 617
Query: 808 aattttggatggtctttaagttgcaagac 836
|||||||| || |||||||||||||||||
Sbjct: 618 aattttgggtgctctttaagttgcaagac 646
>gb|BQ764773.1|BQ764773 EBca01_SQ004_I20 _R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_I20 5', mRNA sequence
Length = 505
Score = 230 bits (116), Expect = 1e-058
Identities = 257/304 (84%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| | |||||| | |
Sbjct: 356 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcgtcccatcctt 297
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 296 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 237
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 236 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 177
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| ||||| | | |||| | |||| ||||| ||
Sbjct: 176 ttttttatagcagctttccggtaaaaattcttcaaataatccggggttgctgtcttggat 117
Query: 1549 acaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaac 1608
|||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 116 acaccaagcacctcgtaatacttggtgttgttgatagtcttccttggcatgcgtccaaac 57
Query: 1609 atgg 1612
||||
Sbjct: 56 atgg 53
Score = 107 bits (54), Expect = 1e-021
Identities = 105/122 (86%)
Strand = Plus / Minus
Query: 1169 tccgcgataaagatagtttcttggttgtcccattgtacagatcgtctaaggaaaccttca 1228
|||| |||| ||||||||| ||||| | ||||||||||| || || || ||||| ||||
Sbjct: 499 tccgtgatagagatagttttttggtagcaccattgtacaggtcttccaacgaaacgttca 440
Query: 1229 tagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaa 1288
| |||||||||||||||||||||||||||||| |||||||||| ||||| || || ||||
Sbjct: 439 tggtatgcaccacatcttcaccacgcttttgtgtgcgtcctctcgagctgcccccgccaa 380
Query: 1289 ag 1290
||
Sbjct: 379 ag 378
>gb|BG417170.1|BG417170 HVSMEk0016J11f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0016J11f, mRNA sequence
Length = 483
Score = 228 bits (115), Expect = 5e-058
Identities = 223/259 (86%)
Strand = Plus / Minus
Query: 1309 agttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattcct 1368
||||| ||||| |||||||| |||||||| | ||||||||||| ||| |||||||| |||
Sbjct: 259 agttgttcaaatatgtcaaaggggctatgcatatcactgctgccgccgcctcccatccct 200
Query: 1369 tccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaaga 1428
|| || || |||||||||||||| |||||||| || |||||||| || |||||| |||||
Sbjct: 199 tctttcagtgcatcttctccatattggtcataaatttccctcttttcagggtcattaaga 140
Query: 1429 acatcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatgg 1488
||||| |||||||| | || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 139 acatcgtaagcttgtgccaattctttaaacttctcagggtctccacccttgtcaggatgg 80
Query: 1489 ttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagac 1548
|||||||| |||||||| | ||| |||||||| | ||||||| | |||| ||||| ||
Sbjct: 79 ttttttatagcagctttccggtaagctttcttcaactcatccggggttgctgtcttggat 20
Query: 1549 acaccaagaacctcgtaat 1567
|||||||| ||||||||||
Sbjct: 19 acaccaagcacctcgtaat 1
Score = 149 bits (75), Expect = 3e-034
Identities = 147/171 (85%)
Strand = Plus / Minus
Query: 1120 gatgccccactcttggatcctttccccttgcacttggagcacaaagcactccgcgataaa 1179
||||||||||||||||||||||| |||||||| || || | | || |||| ||||||
Sbjct: 451 gatgccccactcttggatcctttacccttgcattttccacaaagaacattccgtgataaa 392
Query: 1180 gatagtttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcacc 1239
|||||||| ||||| | ||||||||||| || || || ||||||||||| |||||||||
Sbjct: 391 gatagttttttggtagcaccattgtacaggtcttccaacgaaaccttcatggtatgcacc 332
Query: 1240 acatcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaaag 1290
|||||||||||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 331 acatcttcaccacgcttttgtctgcgtcctctcgagctgcccccgccaaag 281
>gb|BQ467415.1|BQ467415 HS03K23r HS Hordeum vulgare subsp. vulgare cDNA clone HS03K23
5-PRIME, mRNA sequence
Length = 335
Score = 206 bits (104), Expect = 2e-051
Identities = 197/228 (86%)
Strand = Plus / Minus
Query: 1385 ctccatactggtcatagatctccctcttctccgggtcactaagaacatcataagcttgag 1444
||||||| |||||||| || |||||||| || |||||| |||| || || |||||||| |
Sbjct: 335 ctccatattggtcataaatttccctcttttcagggtcattaagcacctcgtaagcttgtg 276
Query: 1445 acagctctttaaacttctcagggtctccacccttatcaggatggttttttatggcagctt 1504
| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 275 cccattctttaaacttctcagggtctccacccttgtcaggatggttttttatagcagctt 216
Query: 1505 ttctgtatgctttcttaagctcatcctgacttgcggtcttagacacaccaagaacctcgt 1564
| | ||| |||||||| | ||||||| | |||| ||||| || |||||||| |||||||
Sbjct: 215 tccggtaagctttcttcaactcatccggggttgctgtcttggatacaccaagcacctcgt 156
Query: 1565 aatacttggtattgttactactcttccttggcatgcgtccaaacatgg 1612
|||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct: 155 aatacttggtgttgttgctagtcttccttggcatgcgtccaaacatgg 108
>gb|AV921554.1|AV921554 AV921554 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23n08 3', mRNA sequence
Length = 621
Score = 202 bits (102), Expect = 3e-050
Identities = 294/358 (82%)
Strand = Plus / Plus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 264 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 323
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| ||||| || ||||| |||| |||||||||||| ||||||
Sbjct: 324 ttcacgtcgtgcatggtcgtctcttcacactgatccacgtccatgtccgacgactggctc 383
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 384 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 443
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || ||||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 444 ggctcagggaactccacgctgaactcgacgaacaggcgacccttcatgaaaggccggcca 503
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||| ||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 504 tgccgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcccca 563
Query: 688 gggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactggaagc 745
|| | |||||||||||||||||||| ||||||||||| || ||||||||||||||||
Sbjct: 564 ggattggatttgatcagaagctgtcgaccatcaagatgggtcagaacaaactggaagc 621
>gb|BM444581.1|BM444581 EBem09_SQ005_M15_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ005_M15 5', mRNA sequence
Length = 412
Score = 198 bits (100), Expect = 4e-049
Identities = 334/412 (81%)
Strand = Plus / Minus
Query: 430 ctcatctcctcttctatgttgacatcgtgaagggtggtctcctcgcactggtccagctcc 489
||||||||||||| |||||| || ||||| | ||| || ||||||||||| |||| |||
Sbjct: 412 ctcatctcctcttatatgttcacgtcgtgcatggtcgtttcctcgcactgatccacgtcc 353
Query: 490 atgtccgacagttggctccctggtttcggcggaaggatcttctccaacgaacggcactgg 549
||||||||| |||||||||||| | ||||| ||||||||||| | || ||| |||
Sbjct: 352 atgtccgacgactggctccctggtcttggcggcaggatcttctcaagtgacttgcattgg 293
Query: 550 gcaggggagagcacaccaggctcgggaaactccacgttgaattcaacaaacagacgaccc 609
||||| || || |||||||| || |||||||| |||| || || ||||| ||||||
Sbjct: 292 ctaggggtcagtactccaggctcagggaactccacactgaactcgacgaacaggcgaccc 233
Query: 610 ttcatgaaaggacggccatgctgaggcataccttcatcgttaatggccttgtgttgacct 669
||||||||||| ||||||||||||||||| || || || || ||||||||||| |||||
Sbjct: 232 ttcatgaaaggccggccatgctgaggcatgccgtcgtcatttatggccttgtgctgacca 173
Query: 670 ggtttaataacctccccggggtcagatttgatcagaagctgtcgcccatcaagatgagta 729
|| || || | |||||| || | |||||||||||||||||||| | |||||| ||
Sbjct: 172 ggctttatgatctccccaggattggatttgatcagaagctgtcggaggtaaagatgggtc 113
Query: 730 agaacaaactggaagccacacaatgcttcggtgagagagattgtgtgctcaacatataag 789
|||||||||||||||||||| | || || || |||||||| || |||||||| | | |
Sbjct: 112 agaacaaactggaagccacagagcgcctcagtcagagagatcgtatgctcaacgaacagg 53
Query: 790 tcatcgtacatcctcttaaattttggatggtctttaagttgcaagacaaaaa 841
||||| || ||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 52 tcatccgacttcctcttgaattttgggtgctctttaagttgcaagacaaaaa 1
>gb|CA000540.1|CA000540 HS07K15u HS Hordeum vulgare subsp. vulgare cDNA clone HS07K15
3-PRIME, mRNA sequence
Length = 551
Score = 194 bits (98), Expect = 6e-048
Identities = 290/354 (81%)
Strand = Plus / Plus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 198 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 257
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| ||||| || ||||| |||| |||||||||||| ||||||
Sbjct: 258 ttcacgtcgtgcatggtcgtctcttcacactgatccacgtccatgtccgacgactggctc 317
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 318 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 377
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || ||||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 378 ggctcagggaactccacgctgaactcgacgaacaggcgacccttcatgaaaggccggcca 437
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||| ||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 438 tgccgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcccca 497
Query: 688 gggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactgg 741
|| | |||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 498 ggattggatttgatcagaagctgtcgaccatcaagatgggtcagaacaaactgg 551
>gb|CA032326.1|CA032326 HX12L02r HX Hordeum vulgare subsp. vulgare cDNA clone HX12L02
5-PRIME, mRNA sequence
Length = 643
Score = 188 bits (95), Expect = 4e-046
Identities = 288/351 (82%), Gaps = 1/351 (0%)
Strand = Plus / Minus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 366 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 307
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| || ||||||||||| |||| |||||||||||| ||||||
Sbjct: 306 ttcacgtcgtgcatggtcgtttcctcgcactgatccacgtccatgtccgacgactggctc 247
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 246 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 187
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || |||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 186 ggctcagggaactccacactgaactcgacgaacaggcgacccttcatgaaaggccggcca 127
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||||||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 126 tgctgaggcatgccctcgtcatttatggccttgtgctgaccaggctttat-atctcccca 68
Query: 688 gggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaac 738
|| | |||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 67 ggattggatttgatcagaagctgtcggccatcaagatgggtcagaacaaac 17
>gb|AL500264.1|AL500264 AL500264 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05M06r 3', mRNA sequence
Length = 599
Score = 186 bits (94), Expect = 2e-045
Identities = 277/338 (81%)
Strand = Plus / Plus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 262 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 321
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| || ||||||||||| |||| |||||||||||| ||||||
Sbjct: 322 ttcacgtcgtgcatggtcgtttcctcgcactgatccacgtccatgtccgacgactggctc 381
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 382 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 441
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || |||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 442 ggctcagggaactccacactgaactcgacgaacaggcgacccttcatgaaaggccggcca 501
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||||||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 502 tgctgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcccca 561
Query: 688 gggtcagatttgatcagaagctgtcgcccatcaagatg 725
|| | |||||||||||||||||||| |||||||||||
Sbjct: 562 ggattggatttgatcagaagctgtcggccatcaagatg 599
>gb|AV934648.1|AV934648 AV934648 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal1b23 3', mRNA sequence
Length = 598
Score = 180 bits (91), Expect = 1e-043
Identities = 271/331 (81%)
Strand = Plus / Plus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 268 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 327
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| || ||||||||||| |||| |||||||||||| ||||||
Sbjct: 328 ttcacgtcgtgcatggtcgtttcctcgcactgatccacgtccatgtccgacgactggctc 387
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 388 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 447
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || ||||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 448 ggctcagggaactccacgctgaactcgacgaacaggcgacccttcatgaaaggccggcca 507
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||||||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 508 tgctgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcccca 567
Query: 688 gggtcagatttgatcagaagctgtcgcccat 718
|| | |||||||||||||||||||| ||||
Sbjct: 568 ggattggatttgatcagaagctgtcggccat 598
>gb|AV936843.1|AV936843 AV936843 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7o24 3', mRNA sequence
Length = 614
Score = 178 bits (90), Expect = 4e-043
Identities = 267/326 (81%)
Strand = Plus / Plus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 287 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 346
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| || ||||||||||| |||| |||||||||||| ||||||
Sbjct: 347 ttcacgtcgtgcatggtcgtttcctcgcactgatccacgtccatgtccgacgactggctc 406
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 407 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 466
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || ||||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 467 ggctcagggaactccacgctgaactcgacgaacaggcgacccttcatgaaaggccggcca 526
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||||||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 527 tgctgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcccca 586
Query: 688 gggtcagatttgatcagaagctgtcg 713
|| | ||||||||||||||||||||
Sbjct: 587 ggattggatttgatcagaagctgtcg 612
>gb|BJ546339.1|BJ546339 BJ546339 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak39b08 3', mRNA sequence
Length = 618
Score = 178 bits (90), Expect = 4e-043
Identities = 267/326 (81%)
Strand = Plus / Plus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 292 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 351
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| || ||||||||||| |||| |||||||||||| ||||||
Sbjct: 352 ttcacgtcgtgcatggtcgtttcctcgcactgatccacgtccatgtccgacgactggctc 411
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 412 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 471
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || ||||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 472 ggctcagggaactccacgctgaagtcgacgaacaggcgacccttcatgaaaggccggcca 531
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||||||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 532 tgctgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcccca 591
Query: 688 gggtcagatttgatcagaagctgtcg 713
|| | ||||||||||||||||||||
Sbjct: 592 ggattggatttgatcagaagctgtcg 617
>gb|BG369450.2|BG369450 HVSMEi0024H04f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024H04f, mRNA sequence
Length = 806
Score = 174 bits (88), Expect = 6e-042
Identities = 262/320 (81%)
Strand = Plus / Minus
Query: 430 ctcatctcctcttctatgttgacatcgtgaagggtggtctcctcgcactggtccagctcc 489
|||||||||||||||||||| || ||| | | ||| || ||||||| || |||| |||
Sbjct: 342 ctcatctcctcttctatgttcacgtcgcgcatggtagtttcctcgccatgatccacgtcc 283
Query: 490 atgtccgacagttggctccctggtttcggcggaaggatcttctccaacgaacggcactgg 549
||||||||| |||||||||||| | | ||| ||||||||||| | || ||| |||
Sbjct: 282 atgtccgacgcctggctccctggtcttgacggcaggatcttctcaagtgacttgcattgg 223
Query: 550 gcaggggagagcacaccaggctcgggaaactccacgttgaattcaacaaacagacgaccc 609
||||| || || |||||||| || ||||||||| |||| || || ||||| ||||||
Sbjct: 222 ctaggggtcagtactccaggctcagggaactccacgctgaactcgacgaacaggcgaccc 163
Query: 610 ttcatgaaaggacggccatgctgaggcataccttcatcgttaatggccttgtgttgacct 669
||||||||||| ||||||||||||||||| || || || || ||||||||||| |||||
Sbjct: 162 ttcatgaaaggccggccatgctgaggcatgccctcgtcatttatggccttgtgctgacca 103
Query: 670 ggtttaataacctccccggggtcagatttgatcagaagctgtcgcccatcaagatgagta 729
|| || || | |||||| || | |||||||||||||||||||| ||||||||||| ||
Sbjct: 102 ggctttatgatctccccaggattggatttgatcagaagctgtcggccatcaagatgggtc 43
Query: 730 agaacaaactggaagccaca 749
||||||||||||||||||||
Sbjct: 42 agaacaaactggaagccaca 23
>gb|BJ545521.1|BJ545521 BJ545521 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17j20 3', mRNA sequence
Length = 575
Score = 172 bits (87), Expect = 2e-041
Identities = 266/326 (81%)
Strand = Plus / Plus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 248 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 307
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| || ||||||||||| |||| |||||||||||| ||||||
Sbjct: 308 ttcacgtcgtgcatggtcgtttcctcgcactgatccacgtccatgtccgacgactggctc 367
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 368 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 427
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || ||||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 428 ggctcagggaactccacgctgaagtcgacgaacaggcgacccttcatgaaaggccggcca 487
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctccccg 687
||||||||||| || || || || ||||||||||| ||||| || || || | ||||||
Sbjct: 488 tgctgaggcatgccctcgtcatttatggccttgtgctgaccaggctttatgatctcccca 547
Query: 688 gggtcagatttgatcagaagctgtcg 713
|| | |||||||||| |||||||||
Sbjct: 548 ggattggatttgatcanaagctgtcg 573
>gb|BE216060.2|BE216060 HV_CEb0009E14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009E14f, mRNA sequence
Length = 572
Score = 170 bits (86), Expect = 9e-041
Identities = 185/218 (84%)
Strand = Plus / Minus
Query: 859 gtatcaggagcttcatcagcttgaccctggaatacaatcttttggttatgttgcattcct 918
|||||||||||||||||||||| |||||||||| | ||| ||||| |||||||||||||
Sbjct: 330 gtatcaggagcttcatcagcttcaccctggaatgcgatcatttggctatgttgcattccc 271
Query: 919 ttctccacatgaacctctaacaccttcttctcctggactaccttgtttcctttacagctt 978
||||||||||||||||| || ||||| || | ||| ||| |||| | | | || ||
Sbjct: 270 ttctccacatgaacctccaagacctttttgtgttgggttactctgttgcatgtgcaactc 211
Query: 979 gggcatttgtccttgtcacttatgatctcacctgatcctttgcattcagggcaaacagtg 1038
|||||| | ||||||||| |||| ||||| ||||||| | |||||||||||||||||||
Sbjct: 210 gggcatctatccttgtcatttatcatctcgcctgatcgtctgcattcagggcaaacagta 151
Query: 1039 ttcatctgttggatcatgccaaggcctatctgtcttgt 1076
|||||||||||||||||| || | ||||||||||||||
Sbjct: 150 ttcatctgttggatcatgacaggtcctatctgtcttgt 113
>gb|BQ662690.1|BQ662690 HS03K23u HS Hordeum vulgare subsp. vulgare cDNA clone HS03K23
3-PRIME, mRNA sequence
Length = 593
Score = 153 bits (77), Expect = 2e-035
Identities = 230/281 (81%)
Strand = Plus / Plus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 282 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 341
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| || ||||||||||| |||| |||||||||||| ||||||
Sbjct: 342 ttcacgtcgtgcatggtcgtttcctcgcactgatccacgtccatgtccgacgactggctc 401
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 402 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 461
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || |||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 462 ggctcagggaactccacactgaactcgacgaacaggcgacccttcatgaaaggccggcca 521
Query: 628 tgctgaggcataccttcatcgttaatggccttgtgttgacc 668
||||||||||| || || || || ||||||||||| |||||
Sbjct: 522 tgctgaggcatgccctcgtcatttatggccttgtgctgacc 562
>gb|BM445276.2|BM445276 EBem09_SQ007_P03_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ007_P03 5', mRNA sequence
Length = 225
Score = 153 bits (77), Expect = 2e-035
Identities = 188/225 (83%)
Strand = Plus / Minus
Query: 617 aaggacggccatgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaa 676
|||| ||||||||||||||||| || || || || ||||||||||| ||||| || || |
Sbjct: 225 aaggccggccatgctgaggcatgccctcgtcatttatggccttgtgctgaccaggcttta 166
Query: 677 taacctccccggggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaa 736
| | |||||| || | |||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 165 tgatctccccaggattggatttgatcagaagctgtcggccatcaagatgggtcagaacaa 106
Query: 737 actggaagccacacaatgcttcggtgagagagattgtgtgctcaacatataagtcatcgt 796
||||||||||||| | || || || |||||||| || |||||||| | | ||||||
Sbjct: 105 actggaagccacagagcgcctcagtcagagagatcgtatgctcaacgaacaggtcatccg 46
Query: 797 acatcctcttaaattttggatggtctttaagttgcaagacaaaaa 841
|| ||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 45 acttcctcttgaattttgggtgctctttaagttgcaagacaaaaa 1
>gb|BF620937.3|BF620937 HVSMEa0003B02f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0003B02f, mRNA sequence
Length = 822
Score = 143 bits (72), Expect = 2e-032
Identities = 165/196 (84%)
Strand = Plus / Minus
Query: 1417 gggtcactaagaacatcataagcttgagacagctctttaaacttctcagggtctccaccc 1476
|||||| ||| |||||| | |||||| | || |||||| ||||| ||||||||||||||
Sbjct: 282 gggtcattaaaaacatcgtcagcttgtgccaattctttatacttcccagggtctccaccc 223
Query: 1477 ttatcaggatggttttttatggcagcttttctgtatgctttcttaagctcatcctgactt 1536
| |||| || ||||||||| ||||||| | ||| |||||||| | ||||||| | ||
Sbjct: 222 atgtcagaatagttttttatatcagctttccggtaagctttcttcaactcatccggggtt 163
Query: 1537 gcggtcttagacacaccaagaacctcgtaatacttggtattgttactactcttccttggc 1596
|| ||||| || |||||||| ||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 162 gctgtcttggatacaccaagcacctcgtaatacttggtgttgttgctagtcttccttggc 103
Query: 1597 atgcgtccaaacatgg 1612
||||||||||||||||
Sbjct: 102 atgcgtccaaacatgg 87
>gb|BQ665984.1|BQ665984 HZ01M10u HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01M10
3-PRIME, mRNA sequence
Length = 534
Score = 141 bits (71), Expect = 8e-032
Identities = 206/251 (82%)
Strand = Plus / Plus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 278 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 337
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| || ||||||||||| |||| |||||||||||| ||||||
Sbjct: 338 ttcacgtcgtgcatggtcgtttcctcgcactgatccacgtccatgtccgacgactggctc 397
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 398 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 457
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || |||||||| |||| || || ||||| ||||||||||||||||| ||||||
Sbjct: 458 ggctcagggaactccacactgaactcgacgaacaggcgacccttcatgaaaggccggcca 517
Query: 628 tgctgaggcat 638
|||||||||||
Sbjct: 518 tgctgaggcat 528
>gb|CA032830.1|CA032830 HX14F06r HX Hordeum vulgare subsp. vulgare cDNA clone HX14F06
5-PRIME, mRNA sequence
Length = 623
Score = 133 bits (67), Expect = 2e-029
Identities = 224/275 (81%), Gaps = 1/275 (0%)
Strand = Plus / Minus
Query: 388 tcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatg 447
||||||||||| ||||| ||| | | || ||||||||||| ||||||||||||||||||
Sbjct: 298 tcttcatcgtatgcttcttgccgcctttgatgctgcctgcgtctcatctcctcttctatg 239
Query: 448 ttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttggctc 507
|| || ||||| | ||| || ||||||||||| |||| |||||||||||| ||||||
Sbjct: 238 ttcacgtcgtgcatggtcgtttcctcgcactgatccacgtccatgtccgacgactggctc 179
Query: 508 cctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcacacca 567
|||||| | ||||| ||||||||||| | || ||| ||| ||||| || || |||
Sbjct: 178 cctggtcttggcggcaggatcttctcaagtgacttgcattggctaggggtcagtactcca 119
Query: 568 ggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacggcca 627
||||| || |||||||| |||| || || ||||| ||||||||||| ||||| ||||||
Sbjct: 118 ggctcagggaactccacactgaactcgacgaacaggcgacccttcat-aaaggccggcca 60
Query: 628 tgctgaggcataccttcatcgttaatggccttgtg 662
||||||||||| || || || || |||||||||||
Sbjct: 59 tgctgaggcatgccctcgtcatttatggccttgtg 25
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 181,675
Number of Sequences: 312970
Number of extensions: 181675
Number of successful extensions: 54558
Number of sequences better than 0.5: 194
Number of HSP's better than 0.5 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54052
Number of HSP's gapped (non-prelim): 458
length of query: 1645
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1626
effective length of database: 169,188,109
effective search space: 275099865234
effective search space used: 275099865234
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)