BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804898.2.1
(739 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM372236.2|BM372236 EBro03_SQ004_G10_R root, 3 week, wat... 48 4e-004
gb|BQ753308.1|BQ753308 EBan01_SQ001_I08_R anther, yellow st... 48 4e-004
gb|AL504432.1|AL504432 AL504432 Hordeum vulgare Barke roots... 46 0.002
gb|BI952075.1|BI952075 HVSMEm0004I13f Hordeum vulgare green... 46 0.002
gb|BF264414.3|BF264414 HV_CEa0009F20f Hordeum vulgare seedl... 46 0.002
gb|BQ470728.1|BQ470728 HX03N17r HX Hordeum vulgare subsp. v... 46 0.002
gb|CA033026.1|CA033026 HX14O10r HX Hordeum vulgare subsp. v... 46 0.002
gb|AL509190.1|AL509190 AL509190 Hordeum vulgare Barke devel... 44 0.006
gb|BG367699.1|BG367699 HVSMEi0013F02f Hordeum vulgare 20 DA... 44 0.006
gb|BI952770.1|BI952770 HVSMEm0007L02f Hordeum vulgare green... 44 0.006
gb|BF064588.1|BF064588 HV_CEb0016A03f Hordeum vulgare seedl... 44 0.006
gb|BF267816.1|BF267816 HV_CEa0018P14f Hordeum vulgare seedl... 44 0.006
gb|BQ462511.1|BQ462511 HI01B23T HI Hordeum vulgare subsp. v... 44 0.006
gb|BU997198.1|BU997198 HI07D15r HI Hordeum vulgare subsp. v... 44 0.006
gb|CB878126.1|CB878126 HP07G23T HP Hordeum vulgare subsp. v... 44 0.006
gb|CV055100.1|CV055100 BNEL116g8 Barley EST endosperm libra... 44 0.006
gb|BF625456.2|BF625456 HVSMEa0009F08f Hordeum vulgare seedl... 42 0.025
gb|BG299737.1|BG299737 HVSMEa0021J19f Hordeum vulgare seedl... 42 0.025
gb|BF259090.2|BF259090 HVSMEf0017K18f Hordeum vulgare seedl... 42 0.025
gb|BF065540.1|BF065540 HV_CEb0012L12f Hordeum vulgare seedl... 42 0.025
gb|BE455111.3|BE455111 HVSMEh0096D16f Hordeum vulgare 5-45 ... 42 0.025
gb|BE559247.3|BE559247 HV_CEb0023D12f Hordeum vulgare seedl... 42 0.025
gb|BJ464699.1|BJ464699 BJ464699 K. Sato unpublished cDNA li... 42 0.025
gb|BJ467098.1|BJ467098 BJ467098 K. Sato unpublished cDNA li... 42 0.025
gb|BM442644.2|BM442644 EBan01_SQ003_M04_R anther, yellow st... 42 0.025
gb|BM370072.2|BM370072 EBro08_SQ002_O12_R root, 3 week, dro... 42 0.025
gb|BQ764457.1|BQ764457 EBan01_SQ005_M21_R anther, yellow st... 42 0.025
gb|CA003186.1|CA003186 HS09K18r HS Hordeum vulgare subsp. v... 42 0.025
gb|CV056366.1|CV056366 BNEL16H4 Barley EST endosperm librar... 42 0.025
gb|CV056811.1|CV056811 BNEL20h11 Barley EST endosperm libra... 42 0.025
gb|CV057052.1|CV057052 BNEL23e2 Barley EST endosperm librar... 42 0.025
gb|CV060371.1|CV060371 BNEL57d5 Barley EST endosperm librar... 42 0.025
gb|CV060609.1|CV060609 BNEL5B12 Barley EST endosperm librar... 42 0.025
gb|CV060683.1|CV060683 BNEL60a10 Barley EST endosperm libra... 42 0.025
gb|CV061205.1|CV061205 BNEL66b1 Barley EST endosperm librar... 42 0.025
gb|CV063120.1|CV063120 BNEL86h11 Barley EST endosperm libra... 42 0.025
gb|CV064121.1|CV064121 BNEL98c4 Barley EST endosperm librar... 42 0.025
gb|AL504727.1|AL504727 AL504727 Hordeum vulgare Barke roots... 40 0.10
gb|AL506861.1|AL506861 AL506861 Hordeum vulgare Barke devel... 40 0.10
gb|AL508512.1|AL508512 AL508512 Hordeum vulgare Barke devel... 40 0.10
gb|AL508514.1|AL508514 AL508514 Hordeum vulgare Barke devel... 40 0.10
gb|AL508516.1|AL508516 AL508516 Hordeum vulgare Barke devel... 40 0.10
gb|BF621440.1|BF621440 HVSMEa0006P07f Hordeum vulgare seedl... 40 0.10
gb|BF622440.1|BF622440 HVSMEa0004E19f Hordeum vulgare seedl... 40 0.10
gb|BF624053.1|BF624053 HVSMEa0009A06f Hordeum vulgare seedl... 40 0.10
gb|BF621987.2|BF621987 HVSMEa0001H11f Hordeum vulgare seedl... 40 0.10
gb|BF630178.2|BF630178 HVSMEb0008D13f Hordeum vulgare seedl... 40 0.10
gb|BF631091.2|BF631091 HVSMEb0014P07f Hordeum vulgare seedl... 40 0.10
gb|BF618977.2|BF618977 HVSMEc0008O15f Hordeum vulgare seedl... 40 0.10
gb|BF255300.2|BF255300 HVSMEf0006H21f Hordeum vulgare seedl... 40 0.10
gb|BF256724.2|BF256724 HVSMEf0010N06f Hordeum vulgare seedl... 40 0.10
gb|BE194602.2|BE194602 HVSMEh0086C22f Hordeum vulgare 5-45 ... 40 0.10
gb|BG369370.1|BG369370 HVSMEi0024C09f Hordeum vulgare 20 DA... 40 0.10
gb|BI948072.1|BI948072 HVSMEl0008B10f Hordeum vulgare spike... 40 0.10
gb|BE558354.2|BE558354 HV_CEb0017F12f Hordeum vulgare seedl... 40 0.10
gb|BI959717.1|BI959717 HVSMEn0020O24f Hordeum vulgare rachi... 40 0.10
gb|BI960158.1|BI960158 HVSMEn0023H16f Hordeum vulgare rachi... 40 0.10
gb|BI960517.1|BI960517 HVSMEn0024O04f Hordeum vulgare rachi... 40 0.10
gb|BF628780.3|BF628780 HVSMEb0008B24f Hordeum vulgare seedl... 40 0.10
gb|BE060459.3|BE060459 HVSMEg0012F20f Hordeum vulgare pre-a... 40 0.10
gb|BE060915.3|BE060915 HVSMEg0013N09f Hordeum vulgare pre-a... 40 0.10
gb|BG367371.2|BG367371 HVSMEi0012A13f Hordeum vulgare 20 DA... 40 0.10
gb|BF261817.3|BF261817 HV_CEa0002E22f Hordeum vulgare seedl... 40 0.10
gb|AV914621.1|AV914621 AV914621 K. Sato unpublished cDNA li... 40 0.10
gb|AV919706.1|AV919706 AV919706 K. Sato unpublished cDNA li... 40 0.10
gb|BM816002.1|BM816002 HC109C02_T3.ab1 HC Hordeum vulgare s... 40 0.10
gb|AJ431790.1|AJ431790 AJ431790 S00002 Hordeum vulgare subs... 40 0.10
gb|BJ467620.1|BJ467620 BJ467620 K. Sato unpublished cDNA li... 40 0.10
gb|BQ460533.1|BQ460533 HA09D23r HA Hordeum vulgare subsp. v... 40 0.10
gb|BQ463467.1|BQ463467 HI05F21r HI Hordeum vulgare subsp. v... 40 0.10
gb|BQ740046.1|BQ740046 HC04A12 HC Hordeum vulgare subsp. vu... 40 0.10
gb|BM375139.2|BM375139 EBem06_SQ002_H14_R embryo, 21 DPA, n... 40 0.10
gb|BM375222.2|BM375222 EBem06_SQ002_L12_R embryo, 21 DPA, n... 40 0.10
gb|BM445057.2|BM445057 EBem09_SQ007_E21_R embryo, 1 Day ger... 40 0.10
gb|BM376135.2|BM376135 EBma01_SQ002_H09_R maternal, 4 DPA, ... 40 0.10
gb|BM443344.2|BM443344 EBro02_SQ003_K21_R root, 3 week, hyd... 40 0.10
gb|BQ760592.1|BQ760592 EBro03_SQ001_O04_R root, 3 week, wat... 40 0.10
gb|BU979362.1|BU979362 HA15O19r HA Hordeum vulgare subsp. v... 40 0.10
gb|BU985088.1|BU985088 HF06B13r HF Hordeum vulgare subsp. v... 40 0.10
gb|BU997141.1|BU997141 HI07A19r HI Hordeum vulgare subsp. v... 40 0.10
gb|BU998407.1|BU998407 HI10P08r HI Hordeum vulgare subsp. v... 40 0.10
gb|CA003340.1|CA003340 HS14B24r HS Hordeum vulgare subsp. v... 40 0.10
gb|CA004683.1|CA004683 HS18F23r HS Hordeum vulgare subsp. v... 40 0.10
gb|CA012415.1|CA012415 HT05F22r HT Hordeum vulgare subsp. v... 40 0.10
gb|CA012497.1|CA012497 HT05J12r HT Hordeum vulgare subsp. v... 40 0.10
gb|CA014377.1|CA014377 HT11C22r HT Hordeum vulgare subsp. v... 40 0.10
gb|CA020677.1|CA020677 HZ37C13r HZ Hordeum vulgare subsp. v... 40 0.10
gb|CA027159.1|CA027159 HZ58B04r HZ Hordeum vulgare subsp. v... 40 0.10
gb|CA031830.1|CA031830 HX11E02r HX Hordeum vulgare subsp. v... 40 0.10
gb|CA031842.1|CA031842 HX11E14r HX Hordeum vulgare subsp. v... 40 0.10
gb|BJ547384.1|BJ547384 BJ547384 K. Sato unpublished cDNA li... 40 0.10
gb|CB859797.1|CB859797 HI11K03w HI Hordeum vulgare subsp. v... 40 0.10
gb|CB879041.1|CB879041 HP10L23T HP Hordeum vulgare subsp. v... 40 0.10
gb|CB879090.1|CB879090 HP10O16T HP Hordeum vulgare subsp. v... 40 0.10
gb|CB882753.1|CB882753 HL02M03w HL Hordeum vulgare subsp. v... 40 0.10
gb|CK123704.1|CK123704 BES1824105c06 BES1824 Hordeum vulgar... 40 0.10
gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, comp... 40 0.10
gb|DQ175990.1| Hordeum vulgare subsp. vulgare clone 65-20A-... 40 0.10
gb|DQ175997.1| Hordeum vulgare subsp. vulgare clone 65-36B-... 40 0.10
gb|AU090244.1|AU090244 AU090244 Hordeum vulgare subsp. vulg... 38 0.40
gb|BE411130.1|BE411130 ISC002.D04F990406 ITEC ISC Barley Le... 38 0.40
gb|BE411463.1|BE411463 ISC005.H04F990621 ITEC ISC Barley Le... 38 0.40
gb|BE411769.1|BE411769 ISC009.A12F990811 ITEC ISC Barley Le... 38 0.40
gb|AL505997.1|AL505997 AL505997 Hordeum vulgare Barke devel... 38 0.40
gb|AV836712.1|AV836712 AV836712 K. Sato unpublished cDNA li... 38 0.40
gb|AV836790.1|AV836790 AV836790 K. Sato unpublished cDNA li... 38 0.40
gb|BF623756.1|BF623756 HVSMEa0005I19f Hordeum vulgare seedl... 38 0.40
gb|BF623468.2|BF623468 HVSMEa0002D21f Hordeum vulgare seedl... 38 0.40
gb|BF621111.2|BF621111 HVSMEa0004B12f Hordeum vulgare seedl... 38 0.40
gb|BF624902.2|BF624902 HVSMEa0005B13f Hordeum vulgare seedl... 38 0.40
gb|BF623778.2|BF623778 HVSMEa0005M17f Hordeum vulgare seedl... 38 0.40
gb|BF624712.2|BF624712 HVSMEa0017I15f Hordeum vulgare seedl... 38 0.40
gb|BF628061.2|BF628061 HVSMEb0003A12f Hordeum vulgare seedl... 38 0.40
gb|BF627121.2|BF627121 HVSMEb0004A03f Hordeum vulgare seedl... 38 0.40
gb|BG300256.1|BG300256 HVSMEb0011M24f Hordeum vulgare seedl... 38 0.40
gb|BG300703.1|BG300703 HVSMEb0018B01f Hordeum vulgare seedl... 38 0.40
gb|BG301193.1|BG301193 HVSMEb0019O02f Hordeum vulgare seedl... 38 0.40
gb|BF254321.2|BF254321 HVSMEf0003K07f Hordeum vulgare seedl... 38 0.40
gb|BF255382.2|BF255382 HVSMEf0006L08f Hordeum vulgare seedl... 38 0.40
gb|BF256785.2|BF256785 HVSMEf0011A04f Hordeum vulgare seedl... 38 0.40
gb|BF257740.2|BF257740 HVSMEf0013L20f Hordeum vulgare seedl... 38 0.40
gb|BF260877.2|BF260877 HVSMEf0023C21f Hordeum vulgare seedl... 38 0.40
gb|BE060493.2|BE060493 HVSMEg0012H07f Hordeum vulgare pre-a... 38 0.40
gb|BE060709.2|BE060709 HVSMEg0013B08f Hordeum vulgare pre-a... 38 0.40
gb|BE195706.2|BE195706 HVSMEh0090D15f Hordeum vulgare 5-45 ... 38 0.40
gb|BE454265.2|BE454265 HVSMEh0093H14f Hordeum vulgare 5-45 ... 38 0.40
gb|BE454544.2|BE454544 HVSMEh0094C24f Hordeum vulgare 5-45 ... 38 0.40
gb|BI948903.1|BI948903 HVSMEl0011F19f Hordeum vulgare spike... 38 0.40
gb|BI949543.1|BI949543 HVSMEl0014I18f Hordeum vulgare spike... 38 0.40
gb|BI950203.1|BI950203 HVSMEl0019I12f Hordeum vulgare spike... 38 0.40
gb|BI953640.1|BI953640 HVSMEm0013K18f Hordeum vulgare green... 38 0.40
gb|BI957854.1|BI957854 HVSMEn0011M04f Hordeum vulgare rachi... 38 0.40
gb|BF262651.2|BF262651 HV_CEa0004J04f Hordeum vulgare seedl... 38 0.40
gb|BF263494.2|BF263494 HV_CEa0006O07f Hordeum vulgare seedl... 38 0.40
gb|BF264458.2|BF264458 HV_CEa0009H17f Hordeum vulgare seedl... 38 0.40
gb|BF265998.2|BF265998 HV_CEa0013O05f Hordeum vulgare seedl... 38 0.40
gb|BF266074.2|BF266074 HV_CEa0014B20f Hordeum vulgare seedl... 38 0.40
gb|BI958537.1|BI958537 HVSMEn0015H21f Hordeum vulgare rachi... 38 0.40
gb|BI959966.1|BI959966 HVSMEn0022K14f Hordeum vulgare rachi... 38 0.40
gb|BI960439.1|BI960439 HVSMEn0024J16f Hordeum vulgare rachi... 38 0.40
gb|BF261448.2|BF261448 HV_CEa0001E24f Hordeum vulgare seedl... 38 0.40
gb|BF628704.3|BF628704 HVSMEb0007E13f Hordeum vulgare seedl... 38 0.40
gb|BF256678.3|BF256678 HVSMEf0010L01f Hordeum vulgare seedl... 38 0.40
gb|BF257225.3|BF257225 HVSMEf0012D23f Hordeum vulgare seedl... 38 0.40
gb|AW982674.3|AW982674 HVSMEg0003O12f Hordeum vulgare pre-a... 38 0.40
gb|BG343457.2|BG343457 HVSMEg0005N02f Hordeum vulgare pre-a... 38 0.40
gb|BG343607.2|BG343607 HVSMEg0006A05f Hordeum vulgare pre-a... 38 0.40
gb|BG344242.2|BG344242 HVSMEg0008F05f Hordeum vulgare pre-a... 38 0.40
gb|AW983491.3|AW983491 HVSMEg0010N05f Hordeum vulgare pre-a... 38 0.40
gb|BG368532.2|BG368532 HVSMEi0019I06f Hordeum vulgare 20 DA... 38 0.40
gb|BF264748.3|BF264748 HV_CEa0010E07f Hordeum vulgare seedl... 38 0.40
gb|BF265862.3|BF265862 HV_CEa0013I13f Hordeum vulgare seedl... 38 0.40
gb|BF267624.3|BF267624 HV_CEa0018H04f Hordeum vulgare seedl... 38 0.40
gb|AV915502.1|AV915502 AV915502 K. Sato unpublished cDNA li... 38 0.40
gb|AV916151.1|AV916151 AV916151 K. Sato unpublished cDNA li... 38 0.40
gb|AV919607.1|AV919607 AV919607 K. Sato unpublished cDNA li... 38 0.40
gb|AV926552.1|AV926552 AV926552 K. Sato unpublished cDNA li... 38 0.40
gb|BM444496.1|BM444496 EBem09_SQ005_H02_R embryo, 1 Day ger... 38 0.40
gb|BM444590.1|BM444590 EBem09_SQ005_N04_R embryo, 1 Day ger... 38 0.40
gb|BM817016.1|BM817016 HB108C08_SK.ab1 HB Hordeum vulgare s... 38 0.40
gb|BM817107.1|BM817107 HC02A05_T3.ab1 HC Hordeum vulgare su... 38 0.40
gb|BM817266.1|BM817266 HC112A10_T3.ab1 HC Hordeum vulgare s... 38 0.40
gb|BM817329.1|BM817329 HC105E06_T3.ab1 HC Hordeum vulgare s... 38 0.40
gb|BM817348.1|BM817348 HC105H12_T3.ab1 HC Hordeum vulgare s... 38 0.40
gb|AJ433184.1|AJ433184 AJ433184 S00002 Hordeum vulgare subs... 38 0.40
gb|AJ460344.1|AJ460344 AJ460344 S00002 Hordeum vulgare subs... 38 0.40
gb|AJ462407.1|AJ462407 AJ462407 S00002 Hordeum vulgare subs... 38 0.40
gb|BJ465174.1|BJ465174 BJ465174 K. Sato unpublished cDNA li... 38 0.40
gb|BJ468880.1|BJ468880 BJ468880 K. Sato unpublished cDNA li... 38 0.40
gb|BQ459969.1|BQ459969 HA07J10r HA Hordeum vulgare subsp. v... 38 0.40
gb|BQ462889.1|BQ462889 HI02F08r HI Hordeum vulgare subsp. v... 38 0.40
gb|BQ462979.1|BQ462979 HI02K04r HI Hordeum vulgare subsp. v... 38 0.40
gb|BQ465819.1|BQ465819 HU04M13r HU Hordeum vulgare subsp. v... 38 0.40
gb|BQ465886.1|BQ465886 HU04P11r HU Hordeum vulgare subsp. v... 38 0.40
gb|BQ466144.1|BQ466144 HT01L08T HT Hordeum vulgare subsp. v... 38 0.40
gb|BQ469139.1|BQ469139 HM03I10r HM Hordeum vulgare subsp. v... 38 0.40
gb|BQ470029.1|BQ470029 HX01I24T HX Hordeum vulgare subsp. v... 38 0.40
gb|BQ470445.1|BQ470445 HX03A04r HX Hordeum vulgare subsp. v... 38 0.40
gb|BQ470457.1|BQ470457 HX03A17r HX Hordeum vulgare subsp. v... 38 0.40
gb|BQ470555.1|BQ470555 HX03F09r HX Hordeum vulgare subsp. v... 38 0.40
gb|BQ471159.1|BQ471159 HV01F05T HV Hordeum vulgare subsp. v... 38 0.40
gb|BQ134698.1|BQ134698 LP20027 Lemma/palea-enriched cDNA li... 38 0.40
gb|BQ294531.1|BQ294531 LP10296 Lemma/palea-enriched cDNA li... 38 0.40
gb|BQ663102.1|BQ663102 HT01M06w HT Hordeum vulgare subsp. v... 38 0.40
gb|BQ739906.1|BQ739906 HB05A01 HB Hordeum vulgare subsp. vu... 38 0.40
gb|BM369140.2|BM369140 EBem07_SQ002_K23_R embryo, 28 DPA, n... 38 0.40
gb|BI780906.2|BI780906 EBma05_SQ001_G24_R maternal, 12 DPA,... 38 0.40
gb|BI779584.2|BI779584 EBro01_SQ004_H21_R root, 3 week, hyd... 38 0.40
gb|BI777137.2|BI777137 EBro03_SQ002_B20_R root, 3 week, wat... 38 0.40
gb|BI777279.2|BI777279 EBro03_SQ002_L09_R root, 3 week, wat... 38 0.40
gb|BI778163.2|BI778163 EBro07_SQ002_G11_R root, 3 week, red... 38 0.40
gb|BQ754153.1|BQ754153 EBca01_SQ003_A08_R carpel, pre-anthe... 38 0.40
gb|BQ754156.1|BQ754156 EBca01_SQ003_A11_R carpel, pre-anthe... 38 0.40
gb|BQ756546.1|BQ756546 EBem09_SQ003_A13_R embryo, 1 Day ger... 38 0.40
gb|BQ758888.1|BQ758888 EBma07_SQ003_J03_R maternal, 21 DPA,... 38 0.40
gb|BQ760902.1|BQ760902 EBro03_SQ003_M19_R root, 3 week, wat... 38 0.40
gb|BQ762658.1|BQ762658 EBro02_SQ004_K17_R root, 3 week, hyd... 38 0.40
gb|BQ763122.1|BQ763122 EBro02_SQ007_D12_R root, 3 week, hyd... 38 0.40
gb|BQ763393.1|BQ763393 EBro02_SQ008_A11_R root, 3 week, hyd... 38 0.40
gb|BQ765546.1|BQ765546 EBro03_SQ007_A14_R root, 3 week, wat... 38 0.40
gb|BQ766997.1|BQ766997 EBro08_SQ007_N18_R root, 3 week, dro... 38 0.40
gb|BQ767179.1|BQ767179 EBro08_SQ008_N05_R root, 3 week, dro... 38 0.40
gb|BQ767996.1|BQ767996 EBro08_SQ010_L10_R root, 3 week, dro... 38 0.40
gb|BQ768346.1|BQ768346 EBro08_SQ011_O09_R root, 3 week, dro... 38 0.40
gb|BQ768755.1|BQ768755 EBro08_SQ012_H15_R root, 3 week, dro... 38 0.40
gb|BU975894.1|BU975894 HB32K01r BC Hordeum vulgare subsp. v... 38 0.40
gb|BU977785.1|BU977785 HA12A16r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU978701.1|BU978701 HA14A13r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU979204.1|BU979204 HA15H06r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU979466.1|BU979466 HA16E04r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU980406.1|BU980406 HA20J03r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU981163.1|BU981163 HA22N03r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU982239.1|BU982239 HA25O22r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU982242.1|BU982242 HA25P02r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU983117.1|BU983117 HA28J19r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU983784.1|BU983784 HA31A16r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU983851.1|BU983851 HA31D20r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU994168.1|BU994168 HM05P14r HM Hordeum vulgare subsp. v... 38 0.40
gb|BU996646.1|BU996646 HM14E12r HM Hordeum vulgare subsp. v... 38 0.40
gb|BU996964.1|BU996964 HI06H02r HI Hordeum vulgare subsp. v... 38 0.40
gb|BU997517.1|BU997517 HI08D15r HI Hordeum vulgare subsp. v... 38 0.40
gb|BU997619.1|BU997619 HI08I06r HI Hordeum vulgare subsp. v... 38 0.40
gb|BU997731.1|BU997731 HI08N15r HI Hordeum vulgare subsp. v... 38 0.40
gb|BU999094.1|BU999094 HI13D16r HI Hordeum vulgare subsp. v... 38 0.40
gb|CA001642.1|CA001642 HS05C17r HS Hordeum vulgare subsp. v... 38 0.40
gb|CA002740.1|CA002740 HS08G05r HS Hordeum vulgare subsp. v... 38 0.40
gb|CA008949.1|CA008949 HU12K15r HU Hordeum vulgare subsp. v... 38 0.40
gb|CA009688.1|CA009688 HU14N09r HU Hordeum vulgare subsp. v... 38 0.40
gb|CA012068.1|CA012068 HT04F17r HT Hordeum vulgare subsp. v... 38 0.40
gb|CA017976.1|CA017976 HV07A04r HV Hordeum vulgare subsp. v... 38 0.40
gb|CA019008.1|CA019008 HV10G22r HV Hordeum vulgare subsp. v... 38 0.40
gb|CA019335.1|CA019335 HV11K15r HV Hordeum vulgare subsp. v... 38 0.40
gb|CA020408.1|CA020408 HZ36D07r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA022995.1|CA022995 HZ44P03r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA023155.1|CA023155 HZ45G08r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA023404.1|CA023404 HZ46C09r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA024795.1|CA024795 HZ50F08r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA025072.1|CA025072 HZ51C05r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA025080.1|CA025080 HZ51C13r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA027398.1|CA027398 HZ58M17r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA029542.1|CA029542 HZ65I08r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA030214.1|CA030214 HX06G16r HX Hordeum vulgare subsp. v... 38 0.40
gb|CB858276.1|CB858276 HI06G16w HI Hordeum vulgare subsp. v... 38 0.40
gb|CB859179.1|CB859179 HI09J18w HI Hordeum vulgare subsp. v... 38 0.40
gb|CB859646.1|CB859646 HI11B22w HI Hordeum vulgare subsp. v... 38 0.40
gb|CB878475.1|CB878475 HP08K18T HP Hordeum vulgare subsp. v... 38 0.40
gb|CB879054.1|CB879054 HP10M16T HP Hordeum vulgare subsp. v... 38 0.40
gb|CB883134.1|CB883134 HQ01E22w HQ Hordeum vulgare subsp. v... 38 0.40
gb|CB883453.1|CB883453 HQ02E23w HQ Hordeum vulgare subsp. v... 38 0.40
gb|CV057702.1|CV057702 BNEL2G5 Barley EST endosperm library... 38 0.40
gb|CV060964.1|CV060964 BNEL63d2 Barley EST endosperm librar... 38 0.40
gb|CV064300.1|CV064300 BNEL9D11 Barley EST endosperm librar... 38 0.40
gb|CK123339.1|CK123339 BES1824103g05 BES1824 Hordeum vulgar... 38 0.40
gb|CK123759.1|CK123759 BES1824105e14 BES1824 Hordeum vulgar... 38 0.40
gb|CK124060.1|CK124060 BES1824106n17 BES1824 Hordeum vulgar... 38 0.40
emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box ... 38 0.40
>gb|BM372236.2|BM372236 EBro03_SQ004_G10_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_G10 5', mRNA sequence
Length = 441
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 gccgccgccgccgtcgtcgccgcc 40
||||||||||||||||||||||||
Sbjct: 339 gccgccgccgccgtcgtcgccgcc 362
>gb|BQ753308.1|BQ753308 EBan01_SQ001_I08_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ001_I08 5', mRNA sequence
Length = 377
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 ccgccgccgccgccgtcgtcgccg 38
||||||||||||||||||||||||
Sbjct: 226 ccgccgccgccgccgtcgtcgccg 203
>gb|AL504432.1|AL504432 AL504432 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05E10V 5', mRNA sequence
Length = 377
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 58 gtgcaccgtcatggacctcccccacgtcgtcgccgaggctcccgccg 104
||||| |||| |||||||||||||||| | ||| ||||| |||||||
Sbjct: 228 gtgcagcgtcctggacctcccccacgttgccgcggaggcccccgccg 274
>gb|BI952075.1|BI952075 HVSMEm0004I13f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0004I13f, mRNA sequence
Length = 1144
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 gcggccgcggcaccgccgccgccgccg 29
||||||||||| |||||||||||||||
Sbjct: 4 gcggccgcggcgccgccgccgccgccg 30
>gb|BF264414.3|BF264414 HV_CEa0009F20f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009F20f, mRNA sequence
Length = 831
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 gcggccgcggcaccgccgccgccgccg 29
||||||||||| |||||||||||||||
Sbjct: 316 gcggccgcggcgccgccgccgccgccg 342
>gb|BQ470728.1|BQ470728 HX03N17r HX Hordeum vulgare subsp. vulgare cDNA clone HX03N17
5-PRIME, mRNA sequence
Length = 602
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 gcggccgcggcaccgccgccgccgccg 29
||||||||||| |||||||||||||||
Sbjct: 174 gcggccgcggcgccgccgccgccgccg 200
>gb|CA033026.1|CA033026 HX14O10r HX Hordeum vulgare subsp. vulgare cDNA clone HX14O10
5-PRIME, mRNA sequence
Length = 611
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 gcggccgcggcaccgccgccgccgccg 29
||||||||||| |||||||||||||||
Sbjct: 225 gcggccgcggcgccgccgccgccgccg 251
>gb|AL509190.1|AL509190 AL509190 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10P14V 5',
mRNA sequence
Length = 598
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ccgccgccgccgtcgtcgccgc 39
||||||||||||||||||||||
Sbjct: 288 ccgccgccgccgtcgtcgccgc 309
>gb|BG367699.1|BG367699 HVSMEi0013F02f Hordeum vulgare 20 DAP spike EST library
HVcDNA0010 (20 DAP) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEi0013F02f, mRNA sequence
Length = 540
Score = 44.1 bits (22), Expect = 0.006
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcgccgcc 40
|||||||||||||||||| |||||||
Sbjct: 48 ccgccgccgccgccgtcgccgccgcc 73
Score = 42.1 bits (21), Expect = 0.025
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 cgccgccgccgccgtcgtcgccgcc 40
|||||||||||||| ||||||||||
Sbjct: 46 cgccgccgccgccgccgtcgccgcc 70
>gb|BI952770.1|BI952770 HVSMEm0007L02f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0007L02f, mRNA sequence
Length = 876
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 cgccgccgccgccgtcgtcgcc 37
||||||||||||||||||||||
Sbjct: 228 cgccgccgccgccgtcgtcgcc 207
>gb|BF064588.1|BF064588 HV_CEb0016A03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016A03f, mRNA sequence
Length = 602
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 cgccgccgccgccgtcgtcgcc 37
||||||||||||||||||||||
Sbjct: 303 cgccgccgccgccgtcgtcgcc 282
>gb|BF267816.1|BF267816 HV_CEa0018P14f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018P14f, mRNA sequence
Length = 805
Score = 44.1 bits (22), Expect = 0.006
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 caccgccgccgccgccgtcgtcgccg 38
||||||||||||||||| ||||||||
Sbjct: 29 caccgccgccgccgccgccgtcgccg 54
>gb|BQ462511.1|BQ462511 HI01B23T HI Hordeum vulgare subsp. vulgare cDNA clone HI01B23
5-PRIME, mRNA sequence
Length = 310
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 cgccgccgccgccgtcgtcgcc 37
||||||||||||||||||||||
Sbjct: 22 cgccgccgccgccgtcgtcgcc 43
>gb|BU997198.1|BU997198 HI07D15r HI Hordeum vulgare subsp. vulgare cDNA clone HI07D15
5-PRIME, mRNA sequence
Length = 540
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 ccgccgccgccgccgtcgtcgc 36
||||||||||||||||||||||
Sbjct: 242 ccgccgccgccgccgtcgtcgc 221
>gb|CB878126.1|CB878126 HP07G23T HP Hordeum vulgare subsp. vulgare cDNA clone HP07G23
5-PRIME, mRNA sequence
Length = 573
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 cgccgccgccgccgtcgtcgcc 37
||||||||||||||||||||||
Sbjct: 64 cgccgccgccgccgtcgtcgcc 43
>gb|CV055100.1|CV055100 BNEL116g8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL116g8 5' similar to HAP3, mRNA
sequence
Length = 674
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 ccgccgccgccgccgtcgtcgc 36
||||||||||||||||||||||
Sbjct: 230 ccgccgccgccgccgtcgtcgc 209
>gb|BF625456.2|BF625456 HVSMEa0009F08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0009F08f, mRNA sequence
Length = 474
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 43 ccgccgccgccgccgtcgtcg 23
>gb|BG299737.1|BG299737 HVSMEa0021J19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021J19f, mRNA sequence
Length = 569
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 129 ccgccgccgccgccgtcgtcg 149
>gb|BF259090.2|BF259090 HVSMEf0017K18f Hordeum vulgare seedling root EST library
HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEf0017K18f, mRNA sequence
Length = 811
Score = 42.1 bits (21), Expect = 0.025
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcgccgc 39
|||||| ||||||||||||||||||
Sbjct: 15 ccgccgacgccgccgtcgtcgccgc 39
>gb|BF065540.1|BF065540 HV_CEb0012L12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012L12f, mRNA sequence
Length = 563
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 ccgccgccgccgtcgtcgccg 38
|||||||||||||||||||||
Sbjct: 53 ccgccgccgccgtcgtcgccg 33
>gb|BE455111.3|BE455111 HVSMEh0096D16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096D16f, mRNA sequence
Length = 708
Score = 42.1 bits (21), Expect = 0.025
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 cgccgccgccgccgtcgtcgccgcc 40
|||||||||||||| ||||||||||
Sbjct: 19 cgccgccgccgccgccgtcgccgcc 43
Score = 38.2 bits (19), Expect = 0.40
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcgcc 37
|||||||||||||||||| ||||
Sbjct: 21 ccgccgccgccgccgtcgccgcc 43
>gb|BE559247.3|BE559247 HV_CEb0023D12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023D12f, mRNA sequence
Length = 821
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 69 ccgccgccgccgccgtcgtcg 49
>gb|BJ464699.1|BJ464699 BJ464699 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35p23 5', mRNA sequence
Length = 563
Score = 42.1 bits (21), Expect = 0.025
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 16 cgccgccgccgccgtcgtcgccgcc 40
|||||||||||||||| ||||||||
Sbjct: 122 cgccgccgccgccgtcttcgccgcc 98
>gb|BJ467098.1|BJ467098 BJ467098 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35p23 3', mRNA sequence
Length = 519
Score = 42.1 bits (21), Expect = 0.025
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 cgccgccgccgccgtcgtcgccgcc 40
|||||||||||||||| ||||||||
Sbjct: 386 cgccgccgccgccgtcttcgccgcc 410
>gb|BM442644.2|BM442644 EBan01_SQ003_M04_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_M04 5', mRNA sequence
Length = 379
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 ccgccgccgccgtcgtcgccg 38
|||||||||||||||||||||
Sbjct: 299 ccgccgccgccgtcgtcgccg 319
>gb|BM370072.2|BM370072 EBro08_SQ002_O12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ002_O12 5', mRNA sequence
Length = 600
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 208 ccgccgccgccgccgtcgtcg 188
>gb|BQ764457.1|BQ764457 EBan01_SQ005_M21_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_M21 5', mRNA sequence
Length = 691
Score = 42.1 bits (21), Expect = 0.025
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 15 ccgccgccgccgccgtcgtcgccgc 39
|||||||||||||||||| ||||||
Sbjct: 52 ccgccgccgccgccgtcgccgccgc 28
Score = 40.1 bits (20), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 17 gccgccgccgccgtcgtcgccgcc 40
||||||||||||| ||||||||||
Sbjct: 53 gccgccgccgccgccgtcgccgcc 30
>gb|CA003186.1|CA003186 HS09K18r HS Hordeum vulgare subsp. vulgare cDNA clone HS09K18
5-PRIME, mRNA sequence
Length = 460
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 247 ccgccgccgccgccgtcgtcg 227
>gb|CV056366.1|CV056366 BNEL16H4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL16H4 5' similar to Unknown
Function, mRNA sequence
Length = 187
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 118 ccgccgccgccgccgtcgtcg 138
>gb|CV056811.1|CV056811 BNEL20h11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL20h11 5' similar to Unknown
Function, mRNA sequence
Length = 187
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 118 ccgccgccgccgccgtcgtcg 138
>gb|CV057052.1|CV057052 BNEL23e2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL23e2 5' similar to Unknown
Function, mRNA sequence
Length = 187
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 118 ccgccgccgccgccgtcgtcg 138
>gb|CV060371.1|CV060371 BNEL57d5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL57d5 5' similar to Unknown
Function, mRNA sequence
Length = 187
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 118 ccgccgccgccgccgtcgtcg 138
>gb|CV060609.1|CV060609 BNEL5B12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL5B12 5' similar to Unknown
Function, mRNA sequence
Length = 187
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 118 ccgccgccgccgccgtcgtcg 138
>gb|CV060683.1|CV060683 BNEL60a10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL60a10 5' similar to Unknown
Function, mRNA sequence
Length = 187
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 118 ccgccgccgccgccgtcgtcg 138
>gb|CV061205.1|CV061205 BNEL66b1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL66b1 5' similar to Unknown
Function, mRNA sequence
Length = 172
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 103 ccgccgccgccgccgtcgtcg 123
>gb|CV063120.1|CV063120 BNEL86h11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL86h11 5' similar to 60S
RIBOSOMAL PROTEIN L5, mRNA sequence
Length = 687
Score = 42.1 bits (21), Expect = 0.025
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 cgccgccgccgccgtcgtcgccgcc 40
||||||||||||||||| |||||||
Sbjct: 35 cgccgccgccgccgtcgccgccgcc 59
>gb|CV064121.1|CV064121 BNEL98c4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL98c4 5' similar to Unknown
Function, mRNA sequence
Length = 172
Score = 42.1 bits (21), Expect = 0.025
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcg 35
|||||||||||||||||||||
Sbjct: 103 ccgccgccgccgccgtcgtcg 123
>gb|AL504727.1|AL504727 AL504727 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06D10V 5', mRNA sequence
Length = 596
Score = 40.1 bits (20), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 17 gccgccgccgccgtcgtcgccgcc 40
|||||||||||||||| |||||||
Sbjct: 143 gccgccgccgccgtcgccgccgcc 166
>gb|AL506861.1|AL506861 AL506861 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04H11T 5',
mRNA sequence
Length = 700
Score = 40.1 bits (20), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcgccg 38
||||||||||||||| ||||||||
Sbjct: 153 ccgccgccgccgccgccgtcgccg 176
>gb|AL508512.1|AL508512 AL508512 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08P17V 5',
mRNA sequence
Length = 700
Score = 40.1 bits (20), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 cgccgccgccgccgtcgtcgccgc 39
|||||||||||||||| |||||||
Sbjct: 97 cgccgccgccgccgtcctcgccgc 120
>gb|AL508514.1|AL508514 AL508514 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08P19V 5',
mRNA sequence
Length = 700
Score = 40.1 bits (20), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 17 gccgccgccgccgtcgtcgccgcc 40
|||||||||||||||| |||||||
Sbjct: 184 gccgccgccgccgtcgccgccgcc 207
>gb|AL508516.1|AL508516 AL508516 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08P23V 5',
mRNA sequence
Length = 629
Score = 40.1 bits (20), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 17 gccgccgccgccgtcgtcgccgcc 40
|||||||||||||||| |||||||
Sbjct: 184 gccgccgccgccgtcgccgccgcc 207
>gb|BF621440.1|BF621440 HVSMEa0006P07f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0006P07f, mRNA sequence
Length = 819
Score = 40.1 bits (20), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcgccg 38
||||||||||||||| ||||||||
Sbjct: 54 ccgccgccgccgccgccgtcgccg 77
>gb|BF622440.1|BF622440 HVSMEa0004E19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004E19f, mRNA sequence
Length = 494
Score = 40.1 bits (20), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcgccg 38
||||||||||||||| ||||||||
Sbjct: 40 ccgccgccgccgccgccgtcgccg 63
>gb|BF624053.1|BF624053 HVSMEa0009A06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0009A06f, mRNA sequence
Length = 813
Score = 40.1 bits (20), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcgccg 38
||||||||||||||| ||||||||
Sbjct: 36 ccgccgccgccgccgccgtcgccg 59
>gb|BF621987.2|BF621987 HVSMEa0001H11f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001H11f, mRNA sequence
Length = 611
Score = 40.1 bits (20), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcgccg 38
||||||||||||||| ||||||||
Sbjct: 39 ccgccgccgccgccgccgtcgccg 62
>gb|BF630178.2|BF630178 HVSMEb0008D13f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008D13f, mRNA sequence
Length = 498
Score = 40.1 bits (20), Expect = 0.10
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 caccgccgccgccgccgtcg 32
||||||||||||||||||||
Sbjct: 26 caccgccgccgccgccgtcg 45
>gb|BF631091.2|BF631091 HVSMEb0014P07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0014P07f, mRNA sequence
Length = 827
Score = 40.1 bits (20), Expect = 0.10
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3 gcggccgcggcaccgccgccgccgccgt 30
||||||||| | ||||||||||||||||
Sbjct: 86 gcggccgcgtcgccgccgccgccgccgt 113
>gb|BF618977.2|BF618977 HVSMEc0008O15f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0008O15f, mRNA sequence
Length = 583
Score = 40.1 bits (20), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ccgccgccgccgccgtcgtcgccg 38
||||||||||||||| ||||||||
Sbjct: 32 ccgccgccgccgccgccgtcgccg 55
>gb|BF255300.2|BF255300 HVSMEf0006H21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006H21f, mRNA sequence
Length = 584
Score = 40.1 bits (20), Expect = 0.10
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 71 gacctcccccacgtcgtcgccgaggctcccgccggc 106
||||||||| || ||||||||||||| |||| ||||
Sbjct: 71 gacctccccgacttcgtcgccgaggcacccgacggc 106
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 186,365
Number of Sequences: 312970
Number of extensions: 186365
Number of successful extensions: 78923
Number of sequences better than 0.5: 261
Number of HSP's better than 0.5 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77890
Number of HSP's gapped (non-prelim): 715
length of query: 739
length of database: 175,134,539
effective HSP length: 19
effective length of query: 720
effective length of database: 169,188,109
effective search space: 121815438480
effective search space used: 121815438480
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)