BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738931.2.11
(609 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF630835.3|BF630835 HVSMEb0014D02f Hordeum vulgare seedl... 377 e-103
gb|BE455946.3|BE455946 HVSMEg0017N08f Hordeum vulgare pre-a... 377 e-103
gb|BQ458327.1|BQ458327 HA05J02r HA Hordeum vulgare subsp. v... 377 e-103
gb|BQ459875.1|BQ459875 HA07N07r HA Hordeum vulgare subsp. v... 377 e-103
gb|BQ460346.1|BQ460346 HA09P16r HA Hordeum vulgare subsp. v... 377 e-103
gb|BQ657029.1|BQ657029 HA09P16u HA Hordeum vulgare subsp. v... 377 e-103
gb|BI777726.2|BI777726 EBro08_SQ001_K06_R root, 3 week, dro... 377 e-103
gb|BQ761674.1|BQ761674 EBem10_SQ001_C13_R embryo, 2 Day ger... 377 e-103
gb|BU976460.1|BU976460 HA03M06r HA Hordeum vulgare subsp. v... 377 e-103
gb|BU980716.1|BU980716 HA21H15r HA Hordeum vulgare subsp. v... 377 e-103
gb|BU985175.1|BU985175 HF06F15r HF Hordeum vulgare subsp. v... 377 e-103
gb|BU988656.1|BU988656 HF18E24r HF Hordeum vulgare subsp. v... 377 e-103
gb|BU994595.1|BU994595 HM07J04r HM Hordeum vulgare subsp. v... 377 e-103
gb|BU995255.1|BU995255 HM09K24r HM Hordeum vulgare subsp. v... 377 e-103
gb|BU998633.1|BU998633 HI11L01r HI Hordeum vulgare subsp. v... 377 e-103
gb|CA021690.1|CA021690 HZ40N02r HZ Hordeum vulgare subsp. v... 377 e-103
gb|CA028156.1|CA028156 HZ61C15r HZ Hordeum vulgare subsp. v... 377 e-103
gb|CB880123.1|CB880123 HM05J04w HM Hordeum vulgare subsp. v... 377 e-103
gb|CK125679.1|CK125679 BES1824110a14 BES1824 Hordeum vulgar... 377 e-103
gb|AW982157.3|AW982157 HVSMEg0002A21f Hordeum vulgare pre-a... 369 e-101
gb|BM377717.2|BM377717 EBem04_SQ004_A02_R embryo, 12 DPA, n... 369 e-101
gb|CB881396.1|CB881396 HM09K24w HM Hordeum vulgare subsp. v... 367 e-100
gb|AV917188.1|AV917188 AV917188 K. Sato unpublished cDNA li... 363 4e-099
gb|BM375980.2|BM375980 EBem06_SQ004_P12_R embryo, 21 DPA, n... 361 2e-098
gb|CV063157.1|CV063157 BNEL87c12 Barley EST endosperm libra... 355 1e-096
gb|BU976959.1|BU976959 HA10J18r HA Hordeum vulgare subsp. v... 351 2e-095
gb|BE231184.1|BE231184 HVSMEg0017G24f Hordeum vulgare pre-a... 323 4e-087
gb|BM444493.1|BM444493 EBem09_SQ005_G19_R embryo, 1 Day ger... 305 9e-082
gb|AV915821.1|AV915821 AV915821 K. Sato unpublished cDNA li... 289 5e-077
gb|AJ462889.1|AJ462889 AJ462889 S00002 Hordeum vulgare subs... 287 2e-076
gb|BU976960.1|BU976960 HA10J18u HA Hordeum vulgare subsp. v... 283 3e-075
gb|BE196149.3|BE196149 HVSMEh0091H23f Hordeum vulgare 5-45 ... 281 1e-074
gb|BQ658141.1|BQ658141 HA05J02u HA Hordeum vulgare subsp. v... 278 2e-073
gb|BM444405.1|BM444405 EBem09_SQ005_C01_R embryo, 1 Day ger... 276 8e-073
gb|BG299941.1|BG299941 HVSMEa0022J15f Hordeum vulgare seedl... 274 3e-072
gb|BF629878.1|BF629878 HVSMEb0007D03f Hordeum vulgare seedl... 268 2e-070
gb|BG368539.1|BG368539 HVSMEi0019J01f Hordeum vulgare 20 DA... 268 2e-070
gb|BE230981.2|BE230981 HVSMEg0015F14f Hordeum vulgare pre-a... 268 2e-070
gb|BF630877.3|BF630877 HVSMEb0014E22f Hordeum vulgare seedl... 268 2e-070
gb|BF260619.3|BF260619 HVSMEf0022H22f Hordeum vulgare seedl... 268 2e-070
gb|BE060628.3|BE060628 HVSMEg0012N02f Hordeum vulgare pre-a... 268 2e-070
gb|BG344853.2|BG344853 HVSMEg0016G20f Hordeum vulgare pre-a... 268 2e-070
gb|BE455617.3|BE455617 HVSMEg0018D20f Hordeum vulgare pre-a... 268 2e-070
gb|BE196465.3|BE196465 HVSMEh0092F22f Hordeum vulgare 5-45 ... 268 2e-070
gb|AL501922.1|AL501922 AL501922 Hordeum vulgare Barke roots... 260 5e-068
gb|AL504623.1|AL504623 AL504623 Hordeum vulgare Barke roots... 260 5e-068
gb|AL505546.1|AL505546 AL505546 Hordeum vulgare Barke roots... 260 5e-068
gb|AL507504.1|AL507504 AL507504 Hordeum vulgare Barke devel... 260 5e-068
gb|BG299886.2|BG299886 HVSMEa0022F13f Hordeum vulgare seedl... 260 5e-068
gb|BE215694.1|BE215694 HV_CEb0008D21f Hordeum vulgare seedl... 260 5e-068
gb|BF627231.3|BF627231 HVSMEb0004E20f Hordeum vulgare seedl... 260 5e-068
gb|BG300119.2|BG300119 HVSMEb0010C12f Hordeum vulgare seedl... 260 5e-068
gb|BF262669.3|BF262669 HV_CEa0004J22f Hordeum vulgare seedl... 260 5e-068
gb|BM374670.1|BM374670 EBma05_SQ002_G13_R maternal, 12 DPA,... 260 5e-068
gb|AV915397.1|AV915397 AV915397 K. Sato unpublished cDNA li... 260 5e-068
gb|AV916880.1|AV916880 AV916880 K. Sato unpublished cDNA li... 260 5e-068
gb|AV919065.1|AV919065 AV919065 K. Sato unpublished cDNA li... 260 5e-068
gb|AV919098.1|AV919098 AV919098 K. Sato unpublished cDNA li... 260 5e-068
gb|AV920486.1|AV920486 AV920486 K. Sato unpublished cDNA li... 260 5e-068
gb|BM444065.1|BM444065 EBem09_SQ004_B03_R embryo, 1 Day ger... 260 5e-068
gb|BJ452851.1|BJ452851 BJ452851 K. Sato unpublished cDNA li... 260 5e-068
gb|BJ455186.1|BJ455186 BJ455186 K. Sato unpublished cDNA li... 260 5e-068
gb|BJ460399.1|BJ460399 BJ460399 K. Sato unpublished cDNA li... 260 5e-068
gb|BJ464777.1|BJ464777 BJ464777 K. Sato unpublished cDNA li... 260 5e-068
gb|BJ466280.1|BJ466280 BJ466280 K. Sato unpublished cDNA li... 260 5e-068
gb|BJ467320.1|BJ467320 BJ467320 K. Sato unpublished cDNA li... 260 5e-068
gb|BJ468268.1|BJ468268 BJ468268 K. Sato unpublished cDNA li... 260 5e-068
gb|BJ468337.1|BJ468337 BJ468337 K. Sato unpublished cDNA li... 260 5e-068
gb|BJ468338.1|BJ468338 BJ468338 K. Sato unpublished cDNA li... 260 5e-068
gb|BJ468341.1|BJ468341 BJ468341 K. Sato unpublished cDNA li... 260 5e-068
gb|BQ458309.1|BQ458309 HA05J22r HA Hordeum vulgare subsp. v... 260 5e-068
gb|BQ459454.1|BQ459454 HA01A05r HA Hordeum vulgare subsp. v... 260 5e-068
gb|BM368346.2|BM368346 EBed01_SQ002_O06_R endosperm, 6 DPA,... 260 5e-068
gb|BM441033.2|BM441033 EBed02_SQ002_D15_R endosperm, 8 DPA,... 260 5e-068
gb|BM097576.2|BM097576 EBem04_SQ002_B14_R embryo, 12 DPA, n... 260 5e-068
gb|BM377604.2|BM377604 EBem04_SQ003_K06_R embryo, 12 DPA, n... 260 5e-068
gb|BM376466.2|BM376466 EBem05_SQ002_E12_R embryo, 14 DPA, n... 260 5e-068
gb|BM375405.2|BM375405 EBem06_SQ003_E02_R embryo, 21 DPA, n... 260 5e-068
gb|BM368997.2|BM368997 EBem07_SQ002_D22_R embryo, 28 DPA, n... 260 5e-068
gb|BM099140.2|BM099140 EBes01_SQ002_F13_R embryo sac, 4-6 D... 260 5e-068
gb|BM100706.2|BM100706 EBma01_SQ005_P24_R maternal, 4 DPA, ... 260 5e-068
gb|BI781031.2|BI781031 EBma03_SQ001_D09_R maternal, 8 DPA, ... 260 5e-068
gb|BM373034.2|BM373034 EBma04_SQ002_N07_R maternal, 10 DPA,... 260 5e-068
gb|BM097966.2|BM097966 EBpi03_SQ002_C20_R pistil, 4 DPA, no... 260 5e-068
gb|BM374225.2|BM374225 EBpi03_SQ003_A08_R pistil, 4 DPA, no... 260 5e-068
gb|BI776429.2|BI776429 EBpi05_SQ001_E17_R pistil, 8 DPA, no... 260 5e-068
gb|BI776744.2|BI776744 EBpi07_SQ001_J24_R pistil, 12 DPA, n... 260 5e-068
gb|BM097257.2|BM097257 EBpi07_SQ002_O09_R pistil, 12 DPA, n... 260 5e-068
gb|BI779605.2|BI779605 EBro01_SQ004_I23_R root, 3 week, hyd... 260 5e-068
gb|BM442845.2|BM442845 EBro02_SQ001_I11_R root, 3 week, hyd... 260 5e-068
gb|BM442951.2|BM442951 EBro02_SQ002_A06_R root, 3 week, hyd... 260 5e-068
gb|BM372167.2|BM372167 EBro03_SQ004_D09_R root, 3 week, wat... 260 5e-068
gb|BI778408.2|BI778408 EBro07_SQ003_D13_R root, 3 week, red... 260 5e-068
gb|BM370231.2|BM370231 EBro08_SQ003_G23_R root, 3 week, dro... 260 5e-068
gb|BQ762310.1|BQ762310 EBro01_SQ005_N10_R root, 3 week, hyd... 260 5e-068
gb|BQ765354.1|BQ765354 EBro03_SQ006_N20_R root, 3 week, wat... 260 5e-068
gb|BQ766365.1|BQ766365 EBro08_SQ005_D21_R root, 3 week, dro... 260 5e-068
gb|BQ768827.1|BQ768827 EBro08_SQ012_D24_R root, 3 week, dro... 260 5e-068
gb|BU970292.1|BU970292 HB14D11r BC Hordeum vulgare subsp. v... 260 5e-068
gb|BU973820.1|BU973820 HB26B04r BC Hordeum vulgare subsp. v... 260 5e-068
gb|BU976551.1|BU976551 HA03O09r HA Hordeum vulgare subsp. v... 260 5e-068
gb|BU978546.1|BU978546 HA13I22r HA Hordeum vulgare subsp. v... 260 5e-068
gb|BU979605.1|BU979605 HA16L04r HA Hordeum vulgare subsp. v... 260 5e-068
gb|BU979684.1|BU979684 HA16O23r HA Hordeum vulgare subsp. v... 260 5e-068
gb|BU981909.1|BU981909 HA24P16r HA Hordeum vulgare subsp. v... 260 5e-068
gb|BU983560.1|BU983560 HA30C11r HA Hordeum vulgare subsp. v... 260 5e-068
gb|BU983644.1|BU983644 HA30H06r HA Hordeum vulgare subsp. v... 260 5e-068
gb|BU983718.1|BU983718 HA30M11r HA Hordeum vulgare subsp. v... 260 5e-068
gb|BU984285.1|BU984285 HF03I03r HF Hordeum vulgare subsp. v... 260 5e-068
gb|BU985291.1|BU985291 HF06L04r HF Hordeum vulgare subsp. v... 260 5e-068
gb|BU986491.1|BU986491 HF12A10r HF Hordeum vulgare subsp. v... 260 5e-068
gb|BU987926.1|BU987926 HF16C15r HF Hordeum vulgare subsp. v... 260 5e-068
gb|BU989071.1|BU989071 HF19K22r HF Hordeum vulgare subsp. v... 260 5e-068
gb|BU996300.1|BU996300 HM13C20r HM Hordeum vulgare subsp. v... 260 5e-068
gb|CA023665.1|CA023665 HZ47A02r HZ Hordeum vulgare subsp. v... 260 5e-068
gb|CA025223.1|CA025223 HZ51J01r HZ Hordeum vulgare subsp. v... 260 5e-068
gb|CA026283.1|CA026283 HZ55H09r HZ Hordeum vulgare subsp. v... 260 5e-068
gb|CA028695.1|CA028695 HZ62P10r HZ Hordeum vulgare subsp. v... 260 5e-068
gb|CA032899.1|CA032899 HX14I08r HX Hordeum vulgare subsp. v... 260 5e-068
gb|CB874442.1|CB874442 HX05E13w HX Hordeum vulgare subsp. v... 260 5e-068
gb|CB876292.1|CB876292 HX10N16w HX Hordeum vulgare subsp. v... 260 5e-068
gb|CV054992.1|CV054992 BNEL115f10 Barley EST endosperm libr... 260 5e-068
gb|CV056483.1|CV056483 BNEL18C12 Barley EST endosperm libra... 260 5e-068
gb|CV056574.1|CV056574 BNEL19C6 Barley EST endosperm librar... 260 5e-068
gb|CV058764.1|CV058764 BNEL40f2 Barley EST endosperm librar... 260 5e-068
gb|CV060443.1|CV060443 BNEL58b8 Barley EST endosperm librar... 260 5e-068
gb|CV061282.1|CV061282 BNEL67a3 Barley EST endosperm librar... 260 5e-068
gb|CV061425.1|CV061425 BNEL68f9 Barley EST endosperm librar... 260 5e-068
gb|CV061478.1|CV061478 BNEL69d10 Barley EST endosperm libra... 260 5e-068
gb|CV061600.1|CV061600 BNEL6G5 Barley EST endosperm library... 260 5e-068
gb|CV061625.1|CV061625 BNEL70a8 Barley EST endosperm librar... 260 5e-068
gb|CK122133.1|CK122133 BES1824101j09 BES1824 Hordeum vulgar... 260 5e-068
gb|CK122498.1|CK122498 BES1824103l04 BES1824 Hordeum vulgar... 260 5e-068
gb|CK123126.1|CK123126 BES1824102d14 BES1824 Hordeum vulgar... 260 5e-068
gb|CK123486.1|CK123486 BES1824104d01 BES1824 Hordeum vulgar... 260 5e-068
gb|CK123491.1|CK123491 BES1824104d06 BES1824 Hordeum vulgar... 260 5e-068
gb|CK123502.1|CK123502 BES1824104d17 BES1824 Hordeum vulgar... 260 5e-068
gb|CK123728.1|CK123728 BES1824105d07 BES1824 Hordeum vulgar... 260 5e-068
gb|CK124068.1|CK124068 BES1824106o04 BES1824 Hordeum vulgar... 260 5e-068
gb|CK124971.1|CK124971 BES1824111A2e04 BES1824 Hordeum vulg... 260 5e-068
gb|CK125666.1|CK125666 BES1824109k13 BES1824 Hordeum vulgar... 260 5e-068
gb|BE454486.3|BE454486 HVSMEh0094K06f Hordeum vulgare 5-45 ... 258 2e-067
gb|BQ464445.1|BQ464445 HF02E22r HF Hordeum vulgare subsp. v... 258 2e-067
gb|BQ656993.1|BQ656993 HA01C03u HA Hordeum vulgare subsp. v... 256 7e-067
gb|AL504947.1|AL504947 AL504947 Hordeum vulgare Barke roots... 254 3e-066
gb|BU978670.1|BU978670 HA13P02r HA Hordeum vulgare subsp. v... 254 3e-066
gb|CK123434.1|CK123434 BES1824104a18 BES1824 Hordeum vulgar... 254 3e-066
gb|BM368496.2|BM368496 EBem08_SQ002_I08_R embryo, 40 DPA, n... 252 1e-065
gb|BM373121.2|BM373121 EBma04_SQ003_D01_R maternal, 10 DPA,... 252 1e-065
gb|BU984060.1|BU984060 HA31N22r HA Hordeum vulgare subsp. v... 252 1e-065
gb|CV060767.1|CV060767 BNEL61a1 Barley EST endosperm librar... 252 1e-065
gb|AL509687.1|AL509687 AL509687 Hordeum vulgare Barke devel... 250 5e-065
gb|AV914063.1|AV914063 AV914063 K. Sato unpublished cDNA li... 250 5e-065
gb|BQ658124.1|BQ658124 HA05J22u HA Hordeum vulgare subsp. v... 250 5e-065
gb|BM098773.2|BM098773 EBpi05_SQ002_A07_R pistil, 8 DPA, no... 250 5e-065
gb|BQ763341.1|BQ763341 EBro02_SQ008_D01_R root, 3 week, hyd... 250 5e-065
gb|BU976552.1|BU976552 HA03O09u HA Hordeum vulgare subsp. v... 250 5e-065
gb|BG344575.2|BG344575 HVSMEg0009L03f Hordeum vulgare pre-a... 246 7e-064
gb|BF258603.2|BF258603 HVSMEf0016C24f Hordeum vulgare seedl... 244 3e-063
gb|AW982321.2|AW982321 HVSMEg0002O07f Hordeum vulgare pre-a... 244 3e-063
gb|BQ657580.1|BQ657580 HA07N07u HA Hordeum vulgare subsp. v... 244 3e-063
gb|BM370989.2|BM370989 EBro04_SQ003_C11_R root, 3 week, sal... 244 3e-063
gb|BU999626.1|BU999626 HI15C10r HI Hordeum vulgare subsp. v... 244 3e-063
gb|CV061626.1|CV061626 BNEL70a9 Barley EST endosperm librar... 240 4e-062
gb|BE231309.2|BE231309 HVSMEg0019M15f Hordeum vulgare pre-a... 238 2e-061
gb|AV922177.1|AV922177 AV922177 K. Sato unpublished cDNA li... 238 2e-061
gb|BI779272.2|BI779272 EBro01_SQ003_I09_R root, 3 week, hyd... 238 2e-061
gb|CB883219.1|CB883219 HQ01J03w HQ Hordeum vulgare subsp. v... 236 7e-061
gb|CA031488.1|CA031488 HX10C09r HX Hordeum vulgare subsp. v... 228 2e-058
gb|BI776470.2|BI776470 EBpi05_SQ001_H18_R pistil, 8 DPA, no... 220 4e-056
gb|BI777419.2|BI777419 EBro04_SQ001_C18_R root, 3 week, sal... 218 2e-055
gb|BF254388.3|BF254388 HVSMEf0003N18f Hordeum vulgare seedl... 214 3e-054
gb|BF257185.3|BF257185 HVSMEf0012B23f Hordeum vulgare seedl... 212 1e-053
gb|AL502816.1|AL502816 AL502816 Hordeum vulgare Barke roots... 208 2e-052
gb|BI947076.1|BI947076 HVSMEl0003I22f Hordeum vulgare spike... 208 2e-052
gb|BM370449.2|BM370449 EBro08_SQ004_E06_R root, 3 week, dro... 198 1e-049
gb|BQ765634.1|BQ765634 EBro03_SQ007_A22_R root, 3 week, wat... 194 2e-048
gb|BQ657021.1|BQ657021 HA01A05u HA Hordeum vulgare subsp. v... 192 9e-048
gb|BG418310.2|BG418310 HVSMEk0022E03f Hordeum vulgare testa... 188 1e-046
gb|BF262661.3|BF262661 HV_CEa0004J14f Hordeum vulgare seedl... 188 1e-046
gb|BI947075.1|BI947075 HVSMEl0003I20f Hordeum vulgare spike... 186 6e-046
gb|BQ759612.1|BQ759612 EBpi03_SQ003_A05_R pistil, 4 DPA, no... 180 4e-044
gb|AL510792.1|AL510792 AL510792 Hordeum vulgare Barke devel... 176 5e-043
gb|BM373753.2|BM373753 EBma03_SQ002_J06_R maternal, 8 DPA, ... 167 5e-040
gb|BI960788.1|BI960788 HVSMEk0019K19f Hordeum vulgare testa... 151 3e-035
gb|BJ465167.1|BJ465167 BJ465167 K. Sato unpublished cDNA li... 151 3e-035
gb|BQ656658.1|BQ656658 HA02K14u HA Hordeum vulgare subsp. v... 149 1e-034
gb|BE060676.3|BE060676 HVSMEg0012P06f Hordeum vulgare pre-a... 147 5e-034
gb|BF259751.1|BF259751 HVSMEf0020C16f Hordeum vulgare seedl... 143 8e-033
gb|AV914037.1|AV914037 AV914037 K. Sato unpublished cDNA li... 131 3e-029
gb|AJ460095.1|AJ460095 AJ460095 S00002 Hordeum vulgare subs... 131 3e-029
gb|BQ757333.1|BQ757333 EBem10_SQ003_M01_R embryo, 2 Day ger... 131 3e-029
gb|BJ464014.1|BJ464014 BJ464014 K. Sato unpublished cDNA li... 127 5e-028
gb|BQ459869.1|BQ459869 HA07N13r HA Hordeum vulgare subsp. v... 123 7e-027
gb|BQ464090.1|BQ464090 HF01F07T HF Hordeum vulgare subsp. v... 123 7e-027
gb|BQ657570.1|BQ657570 HA07N13u HA Hordeum vulgare subsp. v... 123 7e-027
gb|CA022798.1|CA022798 HZ44G05r HZ Hordeum vulgare subsp. v... 123 7e-027
gb|BU974161.1|BU974161 HB27B08r BC Hordeum vulgare subsp. v... 121 3e-026
gb|BJ447435.1|BJ447435 BJ447435 K. Sato unpublished cDNA li... 117 4e-025
gb|AJ460094.1|AJ460094 AJ460094 S00002 Hordeum vulgare subs... 107 4e-022
gb|BJ465170.1|BJ465170 BJ465170 K. Sato unpublished cDNA li... 105 2e-021
gb|CA023655.1|CA023655 HZ46P14r HZ Hordeum vulgare subsp. v... 103 7e-021
gb|BF258772.2|BF258772 HVSMEf0016K05f Hordeum vulgare seedl... 92 3e-017
gb|CV054940.1|CV054940 BNEL115a12 Barley EST endosperm libr... 84 6e-015
gb|AV919938.1|AV919938 AV919938 K. Sato unpublished cDNA li... 82 2e-014
gb|BI776523.2|BI776523 EBpi05_SQ001_L14_R pistil, 8 DPA, no... 78 4e-013
gb|BU999224.1|BU999224 HI13M20r HI Hordeum vulgare subsp. v... 72 2e-011
gb|BU999235.1|BU999235 HI13N20r HI Hordeum vulgare subsp. v... 72 2e-011
gb|CV056458.1|CV056458 BNEL17H9 Barley EST endosperm librar... 72 2e-011
gb|CV059742.1|CV059742 BNEL50e10 Barley EST endosperm libra... 72 2e-011
gb|CV062764.1|CV062764 BNEL82g11 Barley EST endosperm libra... 72 2e-011
gb|AV834107.1|AV834107 AV834107 K. Sato unpublished cDNA li... 70 9e-011
gb|BQ753733.1|BQ753733 EBca01_SQ001_D05_R carpel, pre-anthe... 64 6e-009
gb|BF621431.1|BF621431 HVSMEa0006O19f Hordeum vulgare seedl... 58 4e-007
gb|BU988179.1|BU988179 HF16O02r HF Hordeum vulgare subsp. v... 42 0.021
gb|CA030674.1|CA030674 HX07M14r HX Hordeum vulgare subsp. v... 38 0.33
>gb|BF630835.3|BF630835 HVSMEb0014D02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0014D02f, mRNA sequence
Length = 581
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 70 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 129
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 130 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 189
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 190 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 249
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 250 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 309
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 310 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 369
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 370 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 411
>gb|BE455946.3|BE455946 HVSMEg0017N08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017N08f, mRNA sequence
Length = 564
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 71 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 130
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 131 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 190
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 191 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 250
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 251 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 310
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 311 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 370
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 371 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 412
>gb|BQ458327.1|BQ458327 HA05J02r HA Hordeum vulgare subsp. vulgare cDNA clone HA05J02
5-PRIME, mRNA sequence
Length = 573
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 83 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 142
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 143 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 202
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 203 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 262
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 263 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 322
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 323 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 382
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 383 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 424
>gb|BQ459875.1|BQ459875 HA07N07r HA Hordeum vulgare subsp. vulgare cDNA clone HA07N07
5-PRIME, mRNA sequence
Length = 550
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 72 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 131
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 132 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 191
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 192 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 251
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 252 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 311
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 312 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 371
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 372 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 413
>gb|BQ460346.1|BQ460346 HA09P16r HA Hordeum vulgare subsp. vulgare cDNA clone HA09P16
5-PRIME, mRNA sequence
Length = 583
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 90 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 149
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 150 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 209
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 210 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 269
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 270 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 329
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 330 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 389
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 390 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 431
>gb|BQ657029.1|BQ657029 HA09P16u HA Hordeum vulgare subsp. vulgare cDNA clone HA09P16
3-PRIME, mRNA sequence
Length = 583
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Minus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 503 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 444
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 443 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 384
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 383 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 324
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 323 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 264
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 263 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 204
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 203 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 162
>gb|BI777726.2|BI777726 EBro08_SQ001_K06_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ001_K06 5', mRNA sequence
Length = 478
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 72 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 131
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 132 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 191
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 192 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 251
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 252 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 311
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 312 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 371
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 372 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 413
>gb|BQ761674.1|BQ761674 EBem10_SQ001_C13_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_C13 5', mRNA sequence
Length = 470
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 49 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 108
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 109 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 168
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 169 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 228
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 229 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 288
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 289 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 348
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 349 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 390
>gb|BU976460.1|BU976460 HA03M06r HA Hordeum vulgare subsp. vulgare cDNA clone HA03M06
5-PRIME, mRNA sequence
Length = 528
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 74 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 133
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 134 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 193
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 194 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 253
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 254 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 313
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 314 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 373
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 374 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 415
>gb|BU980716.1|BU980716 HA21H15r HA Hordeum vulgare subsp. vulgare cDNA clone HA21H15
5-PRIME, mRNA sequence
Length = 433
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 78 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 137
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 138 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 197
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 198 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 257
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 258 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 317
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 318 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 377
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 378 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 419
>gb|BU985175.1|BU985175 HF06F15r HF Hordeum vulgare subsp. vulgare cDNA clone HF06F15
5-PRIME, mRNA sequence
Length = 589
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 46 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 105
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 106 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 165
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 166 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 225
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 226 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 285
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 286 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 345
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 346 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 387
>gb|BU988656.1|BU988656 HF18E24r HF Hordeum vulgare subsp. vulgare cDNA clone HF18E24
5-PRIME, mRNA sequence
Length = 567
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 88 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 147
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 148 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 207
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 208 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 267
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 268 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 327
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 328 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 387
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 388 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 429
>gb|BU994595.1|BU994595 HM07J04r HM Hordeum vulgare subsp. vulgare cDNA clone HM07J04
5-PRIME, mRNA sequence
Length = 644
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 82 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 141
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 142 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 201
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 202 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 261
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 262 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 321
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 322 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 381
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 382 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 423
>gb|BU995255.1|BU995255 HM09K24r HM Hordeum vulgare subsp. vulgare cDNA clone HM09K24
5-PRIME, mRNA sequence
Length = 481
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 81 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 140
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 141 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 200
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 201 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 260
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 261 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 320
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 321 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 380
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 381 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 422
>gb|BU998633.1|BU998633 HI11L01r HI Hordeum vulgare subsp. vulgare cDNA clone HI11L01
5-PRIME, mRNA sequence
Length = 536
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 63 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 122
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 123 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 182
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 183 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 242
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 243 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 302
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 303 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 362
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 363 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 404
>gb|CA021690.1|CA021690 HZ40N02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40N02
5-PRIME, mRNA sequence
Length = 493
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 76 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 135
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 136 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 195
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 196 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 255
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 256 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 315
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 316 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 375
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 376 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 417
>gb|CA028156.1|CA028156 HZ61C15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61C15
5-PRIME, mRNA sequence
Length = 509
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 99 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 158
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 159 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 218
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 219 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 278
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 279 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 338
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 339 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 398
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 399 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 440
>gb|CB880123.1|CB880123 HM05J04w HM Hordeum vulgare subsp. vulgare cDNA clone HM05J04
3-PRIME, mRNA sequence
Length = 628
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Minus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 561 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 502
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 501 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 442
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 441 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 382
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 381 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 322
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 321 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 262
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 261 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 220
>gb|CK125679.1|CK125679 BES1824110a14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A1410 5-PRIME, mRNA sequence
Length = 590
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 76 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 135
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 136 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 195
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 196 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 255
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 256 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 315
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 316 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 375
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 376 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 417
>gb|AW982157.3|AW982157 HVSMEg0002A21f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0002A21f, mRNA sequence
Length = 568
Score = 369 bits (186), Expect = e-101
Identities = 303/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 75 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 134
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 135 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 194
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 195 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 254
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 255 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 314
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 315 catgaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 374
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| ||||| |||||
Sbjct: 375 ggtgcctgctgagggtttgaaggggctgggaaccaaagtcgt 416
>gb|BM377717.2|BM377717 EBem04_SQ004_A02_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_A02 5', mRNA sequence
Length = 585
Score = 369 bits (186), Expect = e-101
Identities = 303/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 72 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 131
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 132 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 191
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 192 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 251
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| | |||
Sbjct: 252 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgtccg 311
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 312 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 371
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 372 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 413
>gb|CB881396.1|CB881396 HM09K24w HM Hordeum vulgare subsp. vulgare cDNA clone HM09K24
3-PRIME, mRNA sequence
Length = 552
Score = 367 bits (185), Expect = e-100
Identities = 296/333 (88%)
Strand = Plus / Minus
Query: 79 agcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcct 138
|||| |||||||||||||||| || ||||||||||||||| |||||||||||||||||||
Sbjct: 552 agcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcct 493
Query: 139 ccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgc 198
||| ||||| || |||||||||||||||||||| |||||||| ||| || ||||||||||
Sbjct: 492 ccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgc 433
Query: 199 acagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctg 258
||||||||| |||||||| || |||||||||||||| |||||||||||||||| ||||||
Sbjct: 432 acagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctg 373
Query: 259 gagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaa 318
|||||| |||||||| |||||||| || |||||||| |||||||| ||||||| ||||||
Sbjct: 372 gagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaa 313
Query: 319 cgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcggagatccctgc 378
|| |||||||| ||||||||||| |||||||| || |||||||| || ||| | |||||
Sbjct: 312 tgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgc 253
Query: 379 cgagggcttgaaagggctggggaccaaggtcgt 411
||||| ||||| |||||||| |||||||||||
Sbjct: 252 tgagggtttgaaggggctgggaaccaaggtcgt 220
>gb|AV917188.1|AV917188 AV917188 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8i02 5', mRNA sequence
Length = 568
Score = 363 bits (183), Expect = 4e-099
Identities = 304/343 (88%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccaggg-agtacaccatcaacctcc 128
|||||| |||||| |||||||||||||||| || ||||||| |||||||| |||||||||
Sbjct: 51 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggnagtacaccgtcaacctcc 110
Query: 129 acaagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatca 188
||||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| ||
Sbjct: 111 acaagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctcc 170
Query: 189 ggaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaaca 248
||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||
Sbjct: 171 ggaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaaca 230
Query: 249 agcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgccc 308
||| |||||||||||| |||||||| |||||||| || |||||||| |||||||| ||||
Sbjct: 231 agctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgccc 290
Query: 309 gcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgg 368
||| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || |
Sbjct: 291 gcaggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccg 350
Query: 369 agatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
|| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 351 aggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 393
>gb|BM375980.2|BM375980 EBem06_SQ004_P12_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ004_P12 5', mRNA sequence
Length = 491
Score = 361 bits (182), Expect = 2e-098
Identities = 302/342 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 70 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 129
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 130 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 189
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 190 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 249
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || | |||||| |||||||| |||||
Sbjct: 250 gctcatctggagcagtgggatcagaagcgtgccccgtaaggttcgcgtgaggattgcccg 309
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 310 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 369
Query: 370 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
| | ||||| ||||| ||||| |||||||| ||||| |||||
Sbjct: 370 ggtgcctgctgagggtttgaaggggctgggaaccaatgtcgt 411
>gb|CV063157.1|CV063157 BNEL87c12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87c12 5' similar to putative 60S
ribosomal protein L31, mRNA sequence
Length = 626
Score = 355 bits (179), Expect = 1e-096
Identities = 303/343 (88%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 78 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 137
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 138 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 197
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 198 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 257
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtg-aggatcgccc 308
|| |||||||||||| |||||||| |||||||| || |||||||| ||| ||||| ||||
Sbjct: 258 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaaggattgccc 317
Query: 309 gcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgg 368
||| ||||| || |||||||| ||||||||||| |||||||| || |||||||| || |
Sbjct: 318 gcaggaggattgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccg 377
Query: 369 agatccctgccgagggcttgaaagggctggggaccaaggtcgt 411
|| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 378 aggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 420
>gb|BU976959.1|BU976959 HA10J18r HA Hordeum vulgare subsp. vulgare cDNA clone HA10J18
5-PRIME, mRNA sequence
Length = 393
Score = 351 bits (177), Expect = 2e-095
Identities = 285/321 (88%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 72 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 131
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 132 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 191
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 192 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 251
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 252 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 311
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 312 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 371
Query: 370 gatccctgccgagggcttgaa 390
| | ||||| ||||| |||||
Sbjct: 372 ggtgcctgctgagggtttgaa 392
>gb|BE231184.1|BE231184 HVSMEg0017G24f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017G24f, mRNA sequence
Length = 904
Score = 323 bits (163), Expect = 4e-087
Identities = 292/335 (87%)
Strand = Plus / Plus
Query: 77 ggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgc 136
|||||| |||||||||||||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 102 ggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgc 161
Query: 137 ctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagttt 196
||||| ||||| || |||||||||||||||||||| |||||||| ||| || ||||||||
Sbjct: 162 ctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagttt 221
Query: 197 gcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatc 256
||||||||||| |||||||| || ||||||||||||| |||||||||||||||| ||||
Sbjct: 222 gcacagaaggctatgggcacaacatacgtcaggatcgacgtgaagctcaacaagctcatc 281
Query: 257 tggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagagg 316
|||||||| |||||||| | |||||| || | |||||| |||| ||| ||||||| ||||
Sbjct: 282 tggagcagtgggatcagaatcgtgccccgtatggttcgcgtgatgattgcccgcaggagg 341
Query: 317 aacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcggagatccct 376
|| || |||||||| ||||||||||| |||||||| || |||||||| || || | |||
Sbjct: 342 aatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccgaagtgcct 401
Query: 377 gccgagggcttgaaagggctggggaccaaggtcgt 411
|| ||||| ||||| |||||||| ||||| |||||
Sbjct: 402 gctgagggtttgaaggggctgggaaccaaagtcgt 436
>gb|BM444493.1|BM444493 EBem09_SQ005_G19_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ005_G19 5', mRNA sequence
Length = 382
Score = 305 bits (154), Expect = 9e-082
Identities = 287/330 (86%), Gaps = 1/330 (0%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| | | |||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 53 gaagggcggagcgcctatgaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 112
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||| ||| | || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 113 caagcgcctct-cggtagtaccttcaagaagaaggcacccaatgccatcaaagagctccg 171
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||
Sbjct: 172 gaagtttgcacagaaggctatgggcacaacatacgtcaggatcgacgtgaagctcaacaa 231
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||
Sbjct: 232 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 291
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 369
|| |||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 292 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 351
Query: 370 gatccctgccgagggcttgaaagggctggg 399
| | ||||| ||||| ||||| ||||||||
Sbjct: 352 ggtgcctgctgagggtttgaaggggctggg 381
>gb|AV915821.1|AV915821 AV915821 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16c10 5', mRNA sequence
Length = 443
Score = 289 bits (146), Expect = 5e-077
Identities = 245/278 (88%)
Strand = Plus / Plus
Query: 134 cgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaag 193
|||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |||||
Sbjct: 1 cgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaag 60
Query: 194 tttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcac 253
|||||||||||||| |||||||| || |||||||||||||| |||||||||||||||| |
Sbjct: 61 tttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctc 120
Query: 254 atctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaag 313
||||||||||| |||||||| |||||||| || |||||||| |||||||| ||||||| |
Sbjct: 121 atctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcagg 180
Query: 314 aggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcggagatc 373
||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||| |
Sbjct: 181 aggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccgaggtg 240
Query: 374 cctgccgagggcttgaaagggctggggaccaaggtcgt 411
||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 241 cctgctgagggtttgaaggggctgggaaccaaggtcgt 278
>gb|AJ462889.1|AJ462889 AJ462889 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200075D09F1, mRNA sequence
Length = 300
Score = 287 bits (145), Expect = 2e-076
Identities = 211/233 (90%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 68 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 127
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 128 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 187
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 188 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 247
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgagga 302
|| |||||||||||| |||||||| |||||||| || |||||||| |||||||
Sbjct: 248 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgagga 300
>gb|BU976960.1|BU976960 HA10J18u HA Hordeum vulgare subsp. vulgare cDNA clone HA10J18
3-PRIME, mRNA sequence
Length = 413
Score = 283 bits (143), Expect = 3e-075
Identities = 242/275 (88%)
Strand = Plus / Minus
Query: 137 ctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagttt 196
||||| ||||| || |||||||||||||||||||| |||||||| ||| || ||||||||
Sbjct: 413 ctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagttt 354
Query: 197 gcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatc 256
||||||||||| |||||||| || |||||||||||||| |||||||||||||||| ||||
Sbjct: 353 gcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatc 294
Query: 257 tggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagagg 316
|||||||| |||||||| |||||||| || |||||||| |||||||| ||||||| ||||
Sbjct: 293 tggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggagg 234
Query: 317 aacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcggagatccct 376
|| || |||||||| ||||||||||| |||||||| || |||||||| || ||| | |||
Sbjct: 233 aatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcct 174
Query: 377 gccgagggcttgaaagggctggggaccaaggtcgt 411
|| ||||| ||||| |||||||| |||||||||||
Sbjct: 173 gctgagggtttgaaggggctgggaaccaaggtcgt 139
>gb|BE196149.3|BE196149 HVSMEh0091H23f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091H23f, mRNA sequence
Length = 591
Score = 281 bits (142), Expect = 1e-074
Identities = 256/294 (87%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 73 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 132
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
|||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || |
Sbjct: 133 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 192
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 193 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 252
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || | |||||| |||| ||| | |||
Sbjct: 253 gctcatctggagcagtgggatcagaagcgtgccccgtaaggttcgcgtgaagattggccg 312
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgt 363
| ||| ||| || | ||||| ||| |||| || |||||||| || ||||||||
Sbjct: 313 cgagaagaatgaccaagaggacgcccaggaagagctctactcactcgtcaccgt 366
>gb|BQ658141.1|BQ658141 HA05J02u HA Hordeum vulgare subsp. vulgare cDNA clone HA05J02
3-PRIME, mRNA sequence
Length = 428
Score = 278 bits (140), Expect = 2e-073
Identities = 230/260 (88%)
Strand = Plus / Minus
Query: 152 ttcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggccatg 211
|||||||||||||||||||| |||||||| ||| || ||||||||||||||||||| |||
Sbjct: 425 ttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaaggctatg 366
Query: 212 ggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcgggatc 271
||||| || |||||||||||||| |||||||||||||||| |||||||||||| ||||||
Sbjct: 365 ggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagcagtgggatc 306
Query: 272 aggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggaggat 331
|| |||||||| || |||||||| |||||||| ||||||| |||||| || ||||||||
Sbjct: 305 agaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaatgacgaggaggac 246
Query: 332 gccaaggaggaactctactcccttgtcaccgtcgcggagatccctgccgagggcttgaaa 391
||||||||||| |||||||| || |||||||| || ||| | ||||| ||||| |||||
Sbjct: 245 gccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgagggtttgaag 186
Query: 392 gggctggggaccaaggtcgt 411
|||||||| |||||||||||
Sbjct: 185 gggctgggaaccaaggtcgt 166
>gb|BM444405.1|BM444405 EBem09_SQ005_C01_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ005_C01 5', mRNA sequence
Length = 418
Score = 276 bits (139), Expect = 8e-073
Identities = 244/279 (87%)
Strand = Plus / Plus
Query: 133 gcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaa 192
||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || ||||
Sbjct: 1 gcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaa 60
Query: 193 gtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagca 252
||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 61 gtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagct 120
Query: 253 catctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaa 312
|||| | ||||| |||||||| |||||||| || |||||||| |||||||| |||||||
Sbjct: 121 catccgtagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcag 180
Query: 313 gaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcggagat 372
|||||| || |||||||| ||||||||||| |||||||| || |||||||| || ||| |
Sbjct: 181 gaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccgaggt 240
Query: 373 ccctgccgagggcttgaaagggctggggaccaaggtcgt 411
||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 241 gcctgctgagggtttgaaggggctgggaaccaaggtcgt 279
>gb|BG299941.1|BG299941 HVSMEa0022J15f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0022J15f, mRNA sequence
Length = 820
Score = 274 bits (138), Expect = 3e-072
Identities = 246/282 (87%)
Strand = Plus / Plus
Query: 70 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 129
|||||| |||||| |||||||||||||||| || |||| ||||||||| ||||||| ||
Sbjct: 73 gaagggcggagcgccgaggaaggaggaggtcgtaaccactgagtacaccgtcaacctgca 132
Query: 130 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 189
||||||||| || ||||| || ||| |||||||||||||||| |||||||| ||| || |
Sbjct: 133 caagcgcctacatggctgtaccttctagaagaaggcacccaatgccatcaaagagctccg 192
Query: 190 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 249
|||||||||||||||||| |||||||| || ||||||| |||||| ||||||||||||||
Sbjct: 193 gaagtttgcacagaaggctatgggcacaacagacgtcacgatcgacgtgaagctcaacaa 252
Query: 250 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 309
|| |||||||||||| |||||||| |||||||| || ||||||| |||||||| |||||
Sbjct: 253 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcccgtgaggattgcccg 312
Query: 310 caagaggaacgatgaggaggatgccaaggaggaactctactc 351
||||| ||| || |||||||| |||||||||| ||||||||
Sbjct: 313 caagacgaatgacgaggaggaccccaaggaggagctctactc 354
>gb|BF629878.1|BF629878 HVSMEb0007D03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007D03f, mRNA sequence
Length = 516
Score = 268 bits (135), Expect = 2e-070
Identities = 231/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 92 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 151
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 152 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 211
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 212 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 271
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct: 272 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgatgaggag 331
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 332 gacgctaaggaggagctgtactc 354
>gb|BG368539.1|BG368539 HVSMEi0019J01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019J01f, mRNA sequence
Length = 613
Score = 268 bits (135), Expect = 2e-070
Identities = 231/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 93 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 152
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 153 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 212
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 213 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 272
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct: 273 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgatgaggag 332
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 333 gacgctaaggaggagctgtactc 355
>gb|BE230981.2|BE230981 HVSMEg0015F14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0015F14f, mRNA sequence
Length = 586
Score = 268 bits (135), Expect = 2e-070
Identities = 231/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 81 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 140
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 141 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 200
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 201 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 260
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct: 261 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgatgaggag 320
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 321 gacgctaaggaggagctgtactc 343
>gb|BF630877.3|BF630877 HVSMEb0014E22f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0014E22f, mRNA sequence
Length = 593
Score = 268 bits (135), Expect = 2e-070
Identities = 231/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 88 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 147
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 148 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 207
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 208 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 267
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct: 268 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgatgaggag 327
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 328 gacgctaaggaggagctgtactc 350
>gb|BF260619.3|BF260619 HVSMEf0022H22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022H22f, mRNA sequence
Length = 594
Score = 268 bits (135), Expect = 2e-070
Identities = 231/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 63 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 122
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 123 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 182
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 183 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 242
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct: 243 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgatgaggag 302
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 303 gacgctaaggaggagctgtactc 325
>gb|BE060628.3|BE060628 HVSMEg0012N02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0012N02f, mRNA sequence
Length = 632
Score = 268 bits (135), Expect = 2e-070
Identities = 231/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 74 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 133
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 134 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 193
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 194 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 253
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct: 254 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgatgaggag 313
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 314 gacgctaaggaggagctgtactc 336
>gb|BG344853.2|BG344853 HVSMEg0016G20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016G20f, mRNA sequence
Length = 645
Score = 268 bits (135), Expect = 2e-070
Identities = 231/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 99 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 158
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 159 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 218
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 219 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 278
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct: 279 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgatgaggag 338
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 339 gacgctaaggaggagctgtactc 361
>gb|BE455617.3|BE455617 HVSMEg0018D20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018D20f, mRNA sequence
Length = 582
Score = 268 bits (135), Expect = 2e-070
Identities = 231/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 94 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 153
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 154 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 213
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 214 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 273
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct: 274 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgatgaggag 333
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 334 gacgctaaggaggagctgtactc 356
>gb|BE196465.3|BE196465 HVSMEh0092F22f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092F22f, mRNA sequence
Length = 887
Score = 268 bits (135), Expect = 2e-070
Identities = 231/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 94 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 153
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 154 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 213
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 214 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 273
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct: 274 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgatgaggag 333
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 334 gacgctaaggaggagctgtactc 356
>gb|AL501922.1|AL501922 AL501922 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05N13u 3', mRNA sequence
Length = 560
Score = 260 bits (131), Expect = 5e-068
Identities = 230/263 (87%)
Strand = Plus / Minus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 472 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 413
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 412 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 353
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 352 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 293
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||| ||||||
Sbjct: 292 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgacgaggag 233
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 232 gacgctaaggaggagctgtactc 210
>gb|AL504623.1|AL504623 AL504623 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05N13V 5', mRNA sequence
Length = 571
Score = 260 bits (131), Expect = 5e-068
Identities = 230/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 100 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 159
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 160 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 219
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 220 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 279
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||| ||||||
Sbjct: 280 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgacgaggag 339
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 340 gacgctaaggaggagctgtactc 362
>gb|AL505546.1|AL505546 AL505546 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08M24V 5', mRNA sequence
Length = 644
Score = 260 bits (131), Expect = 5e-068
Identities = 230/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 95 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 154
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 155 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 214
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 215 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 274
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||| ||||||
Sbjct: 275 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgacgaggag 334
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 335 gacgctaaggaggagctgtactc 357
>gb|AL507504.1|AL507504 AL507504 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06A08V 5',
mRNA sequence
Length = 586
Score = 260 bits (131), Expect = 5e-068
Identities = 230/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 85 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 144
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 145 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 204
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 205 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 264
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||| ||||||
Sbjct: 265 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgacgaggag 324
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 325 gacgctaaggaggagctgtactc 347
>gb|BG299886.2|BG299886 HVSMEa0022F13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0022F13f, mRNA sequence
Length = 591
Score = 260 bits (131), Expect = 5e-068
Identities = 230/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||| ||||| ||
Sbjct: 94 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctacacggatgt 153
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 154 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 213
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 214 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 273
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct: 274 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgatgaggag 333
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 334 gacgctaaggaggagctgtactc 356
>gb|BE215694.1|BE215694 HV_CEb0008D21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008D21f, mRNA sequence
Length = 521
Score = 260 bits (131), Expect = 5e-068
Identities = 230/263 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||| ||
Sbjct: 91 aaggacgaggtggtgacccgcgagtacaccgtcaacctccacaagcgcctccacggatgt 150
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 151 accttcaagaagaaggcaccaaatgccatcaaggagatcaggaagtttgcccagaaggcc 210
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagcagcggg 268
||||| || | || ||| | ||||| || |||||||||||||||||||||||||||||
Sbjct: 211 atgggaacaaatgatgtccgcatcgacgttaagctcaacaagcacatctggagcagcggc 270
Query: 269 atcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgatgaggag 328
|||||||| || ||| |||| || ||||| ||||| ||||||||||||||||| ||||||
Sbjct: 271 atcaggagtgtcccgaggagagtccgtgtcaggattgcccgcaagaggaacgacgaggag 330
Query: 329 gatgccaaggaggaactctactc 351
|| || |||||||| || |||||
Sbjct: 331 gacgctaaggaggagctgtactc 353
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 88,729
Number of Sequences: 312970
Number of extensions: 88729
Number of successful extensions: 26903
Number of sequences better than 0.5: 216
Number of HSP's better than 0.5 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26520
Number of HSP's gapped (non-prelim): 224
length of query: 609
length of database: 175,134,539
effective HSP length: 19
effective length of query: 590
effective length of database: 169,188,109
effective search space: 99820984310
effective search space used: 99820984310
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)