BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716207.2.2
(754 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE060122.3|BE060122 HVSMEg0011I14f Hordeum vulgare pre-a... 321 2e-086
gb|BQ458965.1|BQ458965 HA02L05r HA Hordeum vulgare subsp. v... 321 2e-086
gb|BQ466675.1|BQ466675 HS01D19T HS Hordeum vulgare subsp. v... 321 2e-086
gb|BQ468369.1|BQ468369 HM01B04T HM Hordeum vulgare subsp. v... 321 2e-086
gb|BQ660913.1|BQ660913 HM01B04w HM Hordeum vulgare subsp. v... 321 2e-086
gb|BM375177.2|BM375177 EBem06_SQ002_J08_R embryo, 21 DPA, n... 321 2e-086
gb|BM375526.2|BM375526 EBem06_SQ003_J18_R embryo, 21 DPA, n... 321 2e-086
gb|BM375548.2|BM375548 EBem06_SQ003_K20_R embryo, 21 DPA, n... 321 2e-086
gb|BI780853.2|BI780853 EBma05_SQ001_D09_R maternal, 12 DPA,... 321 2e-086
gb|BI777536.2|BI777536 EBro04_SQ001_I10_R root, 3 week, sal... 321 2e-086
gb|BQ754602.1|BQ754602 EBed01_SQ003_E13_R endosperm, 6 DPA,... 321 2e-086
gb|BQ762318.1|BQ762318 EBro01_SQ005_O12_R root, 3 week, hyd... 321 2e-086
gb|BQ762406.1|BQ762406 EBro01_SQ005_C19_R root, 3 week, hyd... 321 2e-086
gb|BQ767317.1|BQ767317 EBro08_SQ008_F17_R root, 3 week, dro... 321 2e-086
gb|BQ767711.1|BQ767711 EBro08_SQ009_K17_R root, 3 week, dro... 321 2e-086
gb|BU977257.1|BU977257 HA11C05r HA Hordeum vulgare subsp. v... 321 2e-086
gb|BU977258.1|BU977258 HA11C05u HA Hordeum vulgare subsp. v... 321 2e-086
gb|BU978564.1|BU978564 HA13J16r HA Hordeum vulgare subsp. v... 321 2e-086
gb|BU979394.1|BU979394 HA16A06r HA Hordeum vulgare subsp. v... 321 2e-086
gb|BU980221.1|BU980221 HA20A14r HA Hordeum vulgare subsp. v... 321 2e-086
gb|BU981687.1|BU981687 HA24F12r HA Hordeum vulgare subsp. v... 321 2e-086
gb|BU999552.1|BU999552 HI14N17r HI Hordeum vulgare subsp. v... 321 2e-086
gb|CA000594.1|CA000594 HS07P17u HS Hordeum vulgare subsp. v... 321 2e-086
gb|CA020290.1|CA020290 HV14N24r HV Hordeum vulgare subsp. v... 321 2e-086
gb|CA020311.1|CA020311 HV14O22r HV Hordeum vulgare subsp. v... 321 2e-086
gb|CA020339.1|CA020339 HZ36A05r HZ Hordeum vulgare subsp. v... 321 2e-086
gb|CA029789.1|CA029789 HX05D14r HX Hordeum vulgare subsp. v... 321 2e-086
gb|CA032599.1|CA032599 HX13J18r HX Hordeum vulgare subsp. v... 321 2e-086
gb|CK122306.1|CK122306 BES1824102n03 BES1824 Hordeum vulgar... 321 2e-086
gb|CK122866.1|CK122866 BES1824106g17 BES1824 Hordeum vulgar... 321 2e-086
gb|CK125078.1|CK125078 BES1824106i18 BES1824 Hordeum vulgar... 321 2e-086
gb|BM374783.1|BM374783 EBma05_SQ002_M23_R maternal, 12 DPA,... 315 1e-084
gb|BE455459.2|BE455459 HVSMEg0017E05f Hordeum vulgare pre-a... 313 5e-084
gb|BM368233.2|BM368233 EBed01_SQ002_I21_R endosperm, 6 DPA,... 313 5e-084
gb|BM376767.2|BM376767 EBem05_SQ003_C21_R embryo, 14 DPA, n... 313 5e-084
gb|BM376287.2|BM376287 EBma01_SQ002_O17_R maternal, 4 DPA, ... 313 5e-084
gb|BQ768250.1|BQ768250 EBro08_SQ011_M04_R root, 3 week, dro... 313 5e-084
gb|CK124393.1|CK124393 BES1824108k21 BES1824 Hordeum vulgar... 311 2e-083
gb|BJ458832.1|BJ458832 BJ458832 K. Sato unpublished cDNA li... 305 1e-081
gb|BM376400.2|BM376400 EBem05_SQ002_B24_R embryo, 14 DPA, n... 305 1e-081
gb|BM369481.2|BM369481 EBem07_SQ003_L10_R embryo, 28 DPA, n... 305 1e-081
gb|BQ764996.1|BQ764996 EBca01_SQ005_A17_R carpel, pre-anthe... 305 1e-081
gb|BQ765983.1|BQ765983 EBro03_SQ008_P14_R root, 3 week, wat... 305 1e-081
gb|CV055835.1|CV055835 BNEL124a11 Barley EST endosperm libr... 305 1e-081
gb|CV056561.1|CV056561 BNEL19B5 Barley EST endosperm librar... 305 1e-081
gb|CV057924.1|CV057924 BNEL32d3 Barley EST endosperm librar... 305 1e-081
gb|CV058555.1|CV058555 BNEL39c5 Barley EST endosperm librar... 305 1e-081
gb|CV062199.1|CV062199 BNEL77d5 Barley EST endosperm librar... 305 1e-081
gb|CV064007.1|CV064007 BNEL96c9 Barley EST endosperm librar... 305 1e-081
gb|BJ451335.1|BJ451335 BJ451335 K. Sato unpublished cDNA li... 303 4e-081
gb|BU983925.1|BU983925 HA31H14r HA Hordeum vulgare subsp. v... 301 2e-080
gb|BG299764.1|BG299764 HVSMEa0021L12f Hordeum vulgare seedl... 299 7e-080
gb|AJ462580.1|AJ462580 AJ462580 S00002 Hordeum vulgare subs... 297 3e-079
gb|BM369011.2|BM369011 EBem07_SQ002_E16_R embryo, 28 DPA, n... 297 3e-079
gb|BG414983.2|BG414983 HVSMEk0004I15f Hordeum vulgare testa... 293 4e-078
gb|BE421664.1|BE421664 HWM012cE.08r ITEC HWM Barley Leaf Li... 289 7e-077
gb|AL507068.1|AL507068 AL507068 Hordeum vulgare Barke devel... 289 7e-077
gb|AL507358.1|AL507358 AL507358 Hordeum vulgare Barke devel... 289 7e-077
gb|AL507378.1|AL507378 AL507378 Hordeum vulgare Barke devel... 289 7e-077
gb|AL509573.1|AL509573 AL509573 Hordeum vulgare Barke devel... 289 7e-077
gb|BF621179.3|BF621179 HVSMEa0004N16f Hordeum vulgare seedl... 289 7e-077
gb|BF622675.3|BF622675 HVSMEa0007M07f Hordeum vulgare seedl... 289 7e-077
gb|BF631514.3|BF631514 HVSMEb0016D21f Hordeum vulgare seedl... 289 7e-077
gb|BF258722.3|BF258722 HVSMEf0016I03f Hordeum vulgare seedl... 289 7e-077
gb|BE455633.3|BE455633 HVSMEg0018H04f Hordeum vulgare pre-a... 289 7e-077
gb|BM444594.1|BM444594 EBem09_SQ005_N09_R embryo, 1 Day ger... 289 7e-077
gb|AJ462899.1|AJ462899 AJ462899 S00002 Hordeum vulgare subs... 289 7e-077
gb|AJ462900.1|AJ462900 AJ462900 S00002 Hordeum vulgare subs... 289 7e-077
gb|BQ460224.1|BQ460224 HA06N21r HA Hordeum vulgare subsp. v... 289 7e-077
gb|BQ460584.1|BQ460584 HA06I06r HA Hordeum vulgare subsp. v... 289 7e-077
gb|BQ460610.1|BQ460610 HA06H09r HA Hordeum vulgare subsp. v... 289 7e-077
gb|BQ462777.1|BQ462777 HI01P15T HI Hordeum vulgare subsp. v... 289 7e-077
gb|BQ463312.1|BQ463312 HI04M02r HI Hordeum vulgare subsp. v... 289 7e-077
gb|BQ656372.1|BQ656372 HA04L08u HA Hordeum vulgare subsp. v... 289 7e-077
gb|BQ660334.1|BQ660334 HI01P15w HI Hordeum vulgare subsp. v... 289 7e-077
gb|BM376532.2|BM376532 EBem05_SQ002_H21_R embryo, 14 DPA, n... 289 7e-077
gb|BI779905.2|BI779905 EBem07_SQ001_I19_R embryo, 28 DPA, n... 289 7e-077
gb|BM099285.2|BM099285 EBes01_SQ002_M16_R embryo sac, 4-6 D... 289 7e-077
gb|BM370879.2|BM370879 EBro04_SQ002_K09_R root, 3 week, sal... 289 7e-077
gb|BI777992.2|BI777992 EBro07_SQ001_L07_R root, 3 week, red... 289 7e-077
gb|BM370627.2|BM370627 EBro08_SQ004_M15_R root, 3 week, dro... 289 7e-077
gb|BQ754654.1|BQ754654 EBed01_SQ003_G21_R endosperm, 6 DPA,... 289 7e-077
gb|BQ766505.1|BQ766505 EBro08_SQ006_D10_R root, 3 week, dro... 289 7e-077
gb|BQ766923.1|BQ766923 EBro08_SQ007_B15_R root, 3 week, dro... 289 7e-077
gb|BQ767745.1|BQ767745 EBro08_SQ009_A21 _R root, 3 week, dr... 289 7e-077
gb|BU978865.1|BU978865 HA14H22r HA Hordeum vulgare subsp. v... 289 7e-077
gb|BU979280.1|BU979280 HA15K16r HA Hordeum vulgare subsp. v... 289 7e-077
gb|BU980819.1|BU980819 HA21M17r HA Hordeum vulgare subsp. v... 289 7e-077
gb|BU981873.1|BU981873 HA24O03r HA Hordeum vulgare subsp. v... 289 7e-077
gb|BU984048.1|BU984048 HA31N10r HA Hordeum vulgare subsp. v... 289 7e-077
gb|BU987345.1|BU987345 HF14I03r HF Hordeum vulgare subsp. v... 289 7e-077
gb|BU996242.1|BU996242 HM12P22r HM Hordeum vulgare subsp. v... 289 7e-077
gb|CA021715.1|CA021715 HZ40O08r HZ Hordeum vulgare subsp. v... 289 7e-077
gb|CA022524.1|CA022524 HZ43H19r HZ Hordeum vulgare subsp. v... 289 7e-077
gb|CA026651.1|CA026651 HZ56I16r HZ Hordeum vulgare subsp. v... 289 7e-077
gb|CB874371.1|CB874371 HX05B05w HX Hordeum vulgare subsp. v... 289 7e-077
gb|CK123785.1|CK123785 BES1824105f16 BES1824 Hordeum vulgar... 289 7e-077
gb|CK125259.1|CK125259 BES1824107i08 BES1824 Hordeum vulgar... 289 7e-077
gb|CA013697.1|CA013697 HT09D19r HT Hordeum vulgare subsp. v... 287 3e-076
gb|BM373820.2|BM373820 EBma03_SQ002_M23_R maternal, 8 DPA, ... 285 1e-075
gb|CA032772.1|CA032772 HX14C16r HX Hordeum vulgare subsp. v... 285 1e-075
gb|BM097523.2|BM097523 EBem04_SQ001_M02_R embryo, 12 DPA, n... 283 4e-075
gb|BM369146.2|BM369146 EBem07_SQ002_L08_R embryo, 28 DPA, n... 283 4e-075
gb|BM098528.2|BM098528 EBem08_SQ003_F04_R embryo, 40 DPA, n... 283 4e-075
gb|BM097118.2|BM097118 EBpi07_SQ002_H07_R pistil, 12 DPA, n... 283 4e-075
gb|BG416022.2|BG416022 HVSMEk0009H11f Hordeum vulgare testa... 281 2e-074
gb|BM369523.2|BM369523 EBem07_SQ003_N10_R embryo, 28 DPA, n... 281 2e-074
gb|BM099027.2|BM099027 EBpi05_SQ002_L20_R pistil, 8 DPA, no... 281 2e-074
gb|CK124303.1|CK124303 BES1824108e24 BES1824 Hordeum vulgar... 281 2e-074
gb|BM444266.1|BM444266 EBem09_SQ004_K09_R embryo, 1 Day ger... 280 6e-074
gb|BM444813.1|BM444813 EBem09_SQ006_I23_R embryo, 1 Day ger... 280 6e-074
gb|AJ462581.1|AJ462581 AJ462581 S00002 Hordeum vulgare subs... 278 3e-073
gb|BU983870.1|BU983870 HA31E18r HA Hordeum vulgare subsp. v... 276 1e-072
gb|BE601697.3|BE601697 HVSMEh0099D17f Hordeum vulgare 5-45 ... 274 4e-072
gb|BM374892.1|BM374892 EBma05_SQ003_G18_R maternal, 12 DPA,... 274 4e-072
gb|BM373254.2|BM373254 EBma04_SQ003_L18_R maternal, 10 DPA,... 274 4e-072
gb|BI777569.2|BI777569 EBro04_SQ001_J23_R root, 3 week, sal... 274 4e-072
gb|BM369027.2|BM369027 EBem07_SQ002_F13_R embryo, 28 DPA, n... 272 2e-071
gb|BU973402.1|BU973402 HB24N01r BC Hordeum vulgare subsp. v... 272 2e-071
gb|BU999650.1|BU999650 HI15D15r HI Hordeum vulgare subsp. v... 272 2e-071
gb|AL510563.1|AL510563 AL510563 Hordeum vulgare Barke devel... 270 6e-071
gb|BF259864.3|BF259864 HVSMEf0020H15f Hordeum vulgare seedl... 270 6e-071
gb|AJ462897.1|AJ462897 AJ462897 S00002 Hordeum vulgare subs... 266 1e-069
gb|BQ662407.1|BQ662407 HS02D19u HS Hordeum vulgare subsp. v... 264 4e-069
gb|AJ434287.1|AJ434287 AJ434287 S00002 Hordeum vulgare subs... 262 1e-068
gb|BU978372.1|BU978372 HA13A14r HA Hordeum vulgare subsp. v... 262 1e-068
gb|AJ462579.1|AJ462579 AJ462579 S00002 Hordeum vulgare subs... 260 6e-068
gb|CA000928.1|CA000928 HS06I11u HS Hordeum vulgare subsp. v... 260 6e-068
gb|BU981119.1|BU981119 HA22L04r HA Hordeum vulgare subsp. v... 256 9e-067
gb|BU982009.1|BU982009 HA25E05r HA Hordeum vulgare subsp. v... 256 9e-067
gb|AJ462896.1|AJ462896 AJ462896 S00002 Hordeum vulgare subs... 254 4e-066
gb|BM098831.2|BM098831 EBpi05_SQ002_D01_R pistil, 8 DPA, no... 254 4e-066
gb|BQ756374.1|BQ756374 EBem08_SQ001_L15_R embryo, 40 DPA, n... 254 4e-066
gb|CA010543.1|CA010543 HT09L23u HT Hordeum vulgare subsp. v... 254 4e-066
gb|CA013877.1|CA013877 HT09L23r HT Hordeum vulgare subsp. v... 252 1e-065
gb|CA017559.1|CA017559 HV05I23r HV Hordeum vulgare subsp. v... 252 1e-065
gb|CA017812.1|CA017812 HV06F15r HV Hordeum vulgare subsp. v... 252 1e-065
gb|CK123591.1|CK123591 BES1824104j01 BES1824 Hordeum vulgar... 248 2e-064
gb|BU974760.1|BU974760 HB29A08r BC Hordeum vulgare subsp. v... 246 9e-064
gb|BJ466611.1|BJ466611 BJ466611 K. Sato unpublished cDNA li... 244 4e-063
gb|BM368520.2|BM368520 EBem08_SQ002_J16_R embryo, 40 DPA, n... 244 4e-063
gb|AJ462898.1|AJ462898 AJ462898 S00002 Hordeum vulgare subs... 238 2e-061
gb|BU966690.1|BU966690 HB02B01r BC Hordeum vulgare subsp. v... 232 1e-059
gb|BQ656643.1|BQ656643 HA02L05u HA Hordeum vulgare subsp. v... 224 3e-057
gb|CV053896.1|CV053896 BNEL104d4 Barley EST endosperm libra... 224 3e-057
gb|BQ756355.1|BQ756355 EBem08_SQ001_H10_R embryo, 40 DPA, n... 218 2e-055
gb|CV060964.1|CV060964 BNEL63d2 Barley EST endosperm librar... 216 8e-055
gb|AJ435946.1|AJ435946 AJ435946 S00002 Hordeum vulgare subs... 208 2e-052
gb|BM441512.2|BM441512 EBma05_SQ004_K02_R maternal, 12 DPA,... 200 5e-050
gb|CA029735.1|CA029735 HX05B05r HX Hordeum vulgare subsp. v... 200 5e-050
gb|BM097628.2|BM097628 EBem04_SQ002_E04_R embryo, 12 DPA, n... 198 2e-049
gb|BQ754127.1|BQ754127 EBca01_SQ002_O18_R carpel, pre-anthe... 184 3e-045
gb|BM375093.2|BM375093 EBem06_SQ002_F05_R embryo, 21 DPA, n... 178 2e-043
gb|BU994143.1|BU994143 HM05O08r HM Hordeum vulgare subsp. v... 178 2e-043
gb|BU983118.1|BU983118 HA28J20r HA Hordeum vulgare subsp. v... 174 3e-042
gb|BM376542.1|BM376542 EBem05_SQ002_I10_R embryo, 14 DPA, n... 170 4e-041
gb|BJ463665.1|BJ463665 BJ463665 K. Sato unpublished cDNA li... 153 1e-035
gb|CA010622.1|CA010622 HT09D19u HT Hordeum vulgare subsp. v... 153 1e-035
gb|BM444026.2|BM444026 EBem09_SQ002_N06_R embryo, 1 Day ger... 123 9e-027
gb|BJ466534.1|BJ466534 BJ466534 K. Sato unpublished cDNA li... 107 5e-022
gb|CD240723.1|CD240723 LP10331 Lemma/palea-enriched cDNA li... 107 5e-022
gb|CD240748.1|CD240748 LP20312 Lemma/palea-enriched cDNA li... 107 5e-022
gb|BM370524.1|BM370524 EBro08_SQ004_H19_R root, 3 week, dro... 98 5e-019
gb|BM100879.2|BM100879 EBpi01_SQ002_E05_R pistil, 1 DPA, no... 98 5e-019
gb|CA023102.1|CA023102 HZ45D22r HZ Hordeum vulgare subsp. v... 80 1e-013
gb|CA027081.1|CA027081 HZ57N09r HZ Hordeum vulgare subsp. v... 80 1e-013
gb|AJ435045.1|AJ435045 AJ435045 S00002 Hordeum vulgare subs... 60 1e-007
gb|BU980138.1|BU980138 HA18L16r HA Hordeum vulgare subsp. v... 56 2e-006
gb|BM374279.1|BM374279 EBpi03_SQ003_C20_R pistil, 4 DPA, no... 52 3e-005
gb|BU979853.1|BU979853 HA17I17r HA Hordeum vulgare subsp. v... 52 3e-005
gb|BM101471.1|BM101471 EBpi01_SQ003_P05_R pistil, 1 DPA, no... 46 0.002
gb|CB880807.1|CB880807 HM07O08w HM Hordeum vulgare subsp. v... 40 0.10
gb|BE215445.1|BE215445 HV_CEb0006N04f Hordeum vulgare seedl... 38 0.41
>gb|BE060122.3|BE060122 HVSMEg0011I14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011I14f, mRNA sequence
Length = 596
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 66 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 125
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 126 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 185
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 186 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 245
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 246 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 305
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 306 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 365
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 366 atcttcaccagggc 379
>gb|BQ458965.1|BQ458965 HA02L05r HA Hordeum vulgare subsp. vulgare cDNA clone HA02L05
5-PRIME, mRNA sequence
Length = 556
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 58 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 117
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 118 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 177
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 178 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 237
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 238 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 297
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 298 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 357
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 358 atcttcaccagggc 371
>gb|BQ466675.1|BQ466675 HS01D19T HS Hordeum vulgare subsp. vulgare cDNA clone HS01D19
5-PRIME, mRNA sequence
Length = 489
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 38 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 97
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 98 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 157
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 158 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 217
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 218 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 277
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 278 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 337
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 338 atcttcaccagggc 351
>gb|BQ468369.1|BQ468369 HM01B04T HM Hordeum vulgare subsp. vulgare cDNA clone HM01B04
5-PRIME, mRNA sequence
Length = 580
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 58 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 117
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 118 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 177
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 178 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 237
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 238 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 297
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 298 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 357
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 358 atcttcaccagggc 371
>gb|BQ660913.1|BQ660913 HM01B04w HM Hordeum vulgare subsp. vulgare cDNA clone HM01B04
3-PRIME, mRNA sequence
Length = 562
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Minus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 524 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 465
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 464 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 405
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 404 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 345
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 344 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 285
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 284 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 225
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 224 atcttcaccagggc 211
>gb|BM375177.2|BM375177 EBem06_SQ002_J08_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ002_J08 5', mRNA sequence
Length = 513
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 69 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 128
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 129 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 188
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 189 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 248
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 249 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 308
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 309 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 368
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 369 atcttcaccagggc 382
>gb|BM375526.2|BM375526 EBem06_SQ003_J18_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_J18 5', mRNA sequence
Length = 560
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 61 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 120
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 121 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 180
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 181 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 240
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 241 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 300
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 301 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 360
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 361 atcttcaccagggc 374
>gb|BM375548.2|BM375548 EBem06_SQ003_K20_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_K20 5', mRNA sequence
Length = 529
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 60 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 119
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 120 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 179
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 180 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 239
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 240 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 299
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 300 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 359
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 360 atcttcaccagggc 373
>gb|BI780853.2|BI780853 EBma05_SQ001_D09_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ001_D09 5', mRNA sequence
Length = 550
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 54 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 113
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 114 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 173
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 174 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 233
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 234 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 293
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 294 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 353
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 354 atcttcaccagggc 367
>gb|BI777536.2|BI777536 EBro04_SQ001_I10_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_I10 5', mRNA sequence
Length = 521
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 63 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 122
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 123 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 182
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 183 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 242
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 243 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 302
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 303 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 362
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 363 atcttcaccagggc 376
>gb|BQ754602.1|BQ754602 EBed01_SQ003_E13_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ003_E13 5', mRNA sequence
Length = 514
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 54 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 113
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 114 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 173
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 174 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 233
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 234 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 293
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 294 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 353
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 354 atcttcaccagggc 367
>gb|BQ762318.1|BQ762318 EBro01_SQ005_O12_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_O12 5', mRNA sequence
Length = 514
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 51 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 110
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 111 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 170
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 171 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 230
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 231 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 290
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 291 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 350
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 351 atcttcaccagggc 364
>gb|BQ762406.1|BQ762406 EBro01_SQ005_C19_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_C19 5', mRNA sequence
Length = 549
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 50 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 109
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 110 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 169
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 170 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 229
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 230 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 289
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 290 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 349
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 350 atcttcaccagggc 363
>gb|BQ767317.1|BQ767317 EBro08_SQ008_F17_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_F17 5', mRNA sequence
Length = 568
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 62 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 121
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 122 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 181
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 182 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 241
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 242 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 301
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 302 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 361
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 362 atcttcaccagggc 375
>gb|BQ767711.1|BQ767711 EBro08_SQ009_K17_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_K17 5', mRNA sequence
Length = 584
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 74 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 133
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 134 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 193
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 194 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 253
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 254 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 313
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 314 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 373
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 374 atcttcaccagggc 387
>gb|BU977257.1|BU977257 HA11C05r HA Hordeum vulgare subsp. vulgare cDNA clone HA11C05
5-PRIME, mRNA sequence
Length = 568
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 73 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 132
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 133 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 192
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 193 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 252
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 253 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 312
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 313 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 372
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 373 atcttcaccagggc 386
>gb|BU977258.1|BU977258 HA11C05u HA Hordeum vulgare subsp. vulgare cDNA clone HA11C05
3-PRIME, mRNA sequence
Length = 568
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Minus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 496 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 437
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 436 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 377
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 376 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 317
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 316 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 257
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 256 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 197
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 196 atcttcaccagggc 183
>gb|BU978564.1|BU978564 HA13J16r HA Hordeum vulgare subsp. vulgare cDNA clone HA13J16
5-PRIME, mRNA sequence
Length = 559
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 69 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 128
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 129 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 188
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 189 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 248
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 249 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 308
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 309 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 368
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 369 atcttcaccagggc 382
>gb|BU979394.1|BU979394 HA16A06r HA Hordeum vulgare subsp. vulgare cDNA clone HA16A06
5-PRIME, mRNA sequence
Length = 525
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 66 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 125
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 126 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 185
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 186 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 245
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 246 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 305
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 306 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 365
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 366 atcttcaccagggc 379
>gb|BU980221.1|BU980221 HA20A14r HA Hordeum vulgare subsp. vulgare cDNA clone HA20A14
5-PRIME, mRNA sequence
Length = 431
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 79 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 138
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 139 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 198
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 199 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 258
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 259 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 318
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 319 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 378
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 379 atcttcaccagggc 392
>gb|BU981687.1|BU981687 HA24F12r HA Hordeum vulgare subsp. vulgare cDNA clone HA24F12
5-PRIME, mRNA sequence
Length = 542
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 74 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 133
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 134 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 193
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 194 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 253
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 254 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 313
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 314 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 373
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 374 atcttcaccagggc 387
>gb|BU999552.1|BU999552 HI14N17r HI Hordeum vulgare subsp. vulgare cDNA clone HI14N17
5-PRIME, mRNA sequence
Length = 571
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 73 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 132
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 133 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 192
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 193 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 252
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 253 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 312
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 313 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 372
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 373 atcttcaccagggc 386
>gb|CA000594.1|CA000594 HS07P17u HS Hordeum vulgare subsp. vulgare cDNA clone HS07P17
3-PRIME, mRNA sequence
Length = 542
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Minus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 496 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 437
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 436 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 377
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 376 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 317
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 316 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 257
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 256 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 197
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 196 atcttcaccagggc 183
>gb|CA020290.1|CA020290 HV14N24r HV Hordeum vulgare subsp. vulgare cDNA clone HV14N24
5-PRIME, mRNA sequence
Length = 533
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 74 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 133
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 134 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 193
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 194 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 253
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 254 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 313
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 314 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 373
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 374 atcttcaccagggc 387
>gb|CA020311.1|CA020311 HV14O22r HV Hordeum vulgare subsp. vulgare cDNA clone HV14O22
5-PRIME, mRNA sequence
Length = 546
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 58 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 117
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 118 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 177
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 178 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 237
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 238 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 297
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 298 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 357
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 358 atcttcaccagggc 371
>gb|CA020339.1|CA020339 HZ36A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36A05
5-PRIME, mRNA sequence
Length = 517
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 60 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 119
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 120 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 179
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 180 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 239
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 240 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 299
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 300 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 359
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 360 atcttcaccagggc 373
>gb|CA029789.1|CA029789 HX05D14r HX Hordeum vulgare subsp. vulgare cDNA clone HX05D14
5-PRIME, mRNA sequence
Length = 471
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Minus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 439 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 380
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 379 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 320
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 319 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 260
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 259 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 200
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 199 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 140
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 139 atcttcaccagggc 126
>gb|CA032599.1|CA032599 HX13J18r HX Hordeum vulgare subsp. vulgare cDNA clone HX13J18
5-PRIME, mRNA sequence
Length = 631
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 73 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 132
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 133 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 192
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 193 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 252
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 253 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 312
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 313 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 372
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 373 atcttcaccagggc 386
>gb|CK122306.1|CK122306 BES1824102n03 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N032 5-PRIME, mRNA sequence
Length = 661
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 63 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 122
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 123 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 182
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 183 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 242
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 243 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 302
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 303 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 362
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 363 atcttcaccagggc 376
>gb|CK122866.1|CK122866 BES1824106g17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G176 5-PRIME, mRNA sequence
Length = 557
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 37 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 96
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 97 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 156
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 157 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 216
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 217 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 276
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 277 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 336
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 337 atcttcaccagggc 350
>gb|CK125078.1|CK125078 BES1824106i18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I186 5-PRIME, mRNA sequence
Length = 575
Score = 321 bits (162), Expect = 2e-086
Identities = 276/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 63 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 122
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 123 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 182
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 183 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 242
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 243 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 302
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 303 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 362
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 363 atcttcaccagggc 376
>gb|BM374783.1|BM374783 EBma05_SQ002_M23_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ002_M23 5', mRNA sequence
Length = 503
Score = 315 bits (159), Expect = 1e-084
Identities = 275/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 60 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 119
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 120 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 179
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 180 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 239
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 240 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 299
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| |||||| || ||||||| |||||||||
Sbjct: 300 atcaaggacctgatggagagggggctcatcangatggtgtcaatccactccagccagcag 359
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 360 atcttcaccagggc 373
>gb|BE455459.2|BE455459 HVSMEg0017E05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017E05f, mRNA sequence
Length = 593
Score = 313 bits (158), Expect = 5e-084
Identities = 275/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||| ||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 75 atggcgccgaacaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 134
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 135 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 194
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 195 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 254
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 255 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 314
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 315 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 374
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 375 atcttcaccagggc 388
>gb|BM368233.2|BM368233 EBed01_SQ002_I21_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_I21 5', mRNA sequence
Length = 558
Score = 313 bits (158), Expect = 5e-084
Identities = 275/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 57 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 116
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 117 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 176
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 177 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 236
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || | ||||||||| || || ||||| |||||
Sbjct: 237 atcacgccatccgtcctctccgagcgactcaagatcaacgggtctctggctcgcagggct 296
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 297 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 356
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 357 atcttcaccagggc 370
>gb|BM376767.2|BM376767 EBem05_SQ003_C21_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_C21 5', mRNA sequence
Length = 533
Score = 313 bits (158), Expect = 5e-084
Identities = 275/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 34 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 93
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 94 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 153
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 154 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 213
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 214 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 273
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| |||||| || ||||||| |||||||||
Sbjct: 274 atcaaggacctgatggagagggggctcatcaagatggtgtcaatccactccagccagcag 333
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 334 atcttcaccagggc 347
>gb|BM376287.2|BM376287 EBma01_SQ002_O17_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_O17 5', mRNA sequence
Length = 514
Score = 313 bits (158), Expect = 5e-084
Identities = 275/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 69 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 128
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 129 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 188
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 189 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 248
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 249 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 308
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| |||||| || ||||||| |||||||||
Sbjct: 309 atcaaggacctgatggagagggggctcatcaagatggtgtcaatccactccagccagcag 368
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 369 atcttcaccagggc 382
>gb|BQ768250.1|BQ768250 EBro08_SQ011_M04_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_M04 5', mRNA sequence
Length = 556
Score = 313 bits (158), Expect = 5e-084
Identities = 275/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 37 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 96
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 97 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 156
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||| ||||||||||| | ||||||||||||||||||||
Sbjct: 157 gtgctcttcgaccaggccacctactacaagctgctcaccgaggtgcccaagtacaagcag 216
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 217 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 276
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 277 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 336
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 337 atcttcaccagggc 350
>gb|CK124393.1|CK124393 BES1824108k21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K218 5-PRIME, mRNA sequence
Length = 611
Score = 311 bits (157), Expect = 2e-083
Identities = 274/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||| ||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 46 atggcgccgaanaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggn 105
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| || ||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 106 gggaagcagaanaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 165
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 166 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 225
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 226 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 285
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 286 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 345
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 346 atcttcaccagggc 359
>gb|BJ458832.1|BJ458832 BJ458832 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33j18 3', mRNA sequence
Length = 530
Score = 305 bits (154), Expect = 1e-081
Identities = 274/314 (87%)
Strand = Plus / Minus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || | ||||| ||||||||||||||||| ||
Sbjct: 496 atggcgccgaagaaggagaaggccccggcggcttcgtccaagccggccaagtccggcggc 437
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 436 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 377
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 376 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 317
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || || ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 316 atcacgccatcagtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 257
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 256 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 197
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 196 atcttcaccagggc 183
>gb|BM376400.2|BM376400 EBem05_SQ002_B24_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_B24 5', mRNA sequence
Length = 523
Score = 305 bits (154), Expect = 1e-081
Identities = 274/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 48 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 107
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 108 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 167
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 168 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 227
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || | ||||||||| || || ||||| |||||
Sbjct: 228 atcacgccatccgtcctctccgagcgactcaagatcaacgggtctctggctcgcagggct 287
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| |||||| || ||||||| |||||||||
Sbjct: 288 atcaaggacctgatggagagggggctcatcaagatggtgtcaatccactccagccagcag 347
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 348 atcttcaccagggc 361
>gb|BM369481.2|BM369481 EBem07_SQ003_L10_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ003_L10 5', mRNA sequence
Length = 558
Score = 305 bits (154), Expect = 1e-081
Identities = 274/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| |||||||| || ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 49 atggcgccgaagaacgagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 108
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 109 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 168
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 169 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 228
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 229 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 288
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| |||||| || ||||||| |||||||||
Sbjct: 289 atcaaggacctgatggagagggggctcatcaagatggtgtcaatccactccagccagcag 348
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 349 atcttcaccagggc 362
>gb|BQ764996.1|BQ764996 EBca01_SQ005_A17_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_A17 5', mRNA sequence
Length = 547
Score = 305 bits (154), Expect = 1e-081
Identities = 274/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 43 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 102
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 103 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 162
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| | |||||||||||||||| | ||||||||||||||||||||
Sbjct: 163 gtgctcttcgaccaggccatctacgacaagctgctcaccgaggtgcccaagtacaagcag 222
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 223 atcacgccatccgtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 282
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| |||||| || ||||||| |||||||||
Sbjct: 283 atcaaggacctgatggagagggggctcatcaagatggtgtcaatccactccagccagcag 342
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 343 atcttcaccagggc 356
>gb|BQ765983.1|BQ765983 EBro03_SQ008_P14_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_P14 5', mRNA sequence
Length = 496
Score = 305 bits (154), Expect = 1e-081
Identities = 274/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| ||||||||||||||||| ||
Sbjct: 43 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtccggcggc 102
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 103 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 162
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 163 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 222
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || ||| ||||||||||||| || | ||||||||| || || ||||| |||||
Sbjct: 223 atcacgccatccgtcctctccgagcgactcaagatcaacgggtctctggctcgcagggct 282
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| |||||| || ||||||| |||||||||
Sbjct: 283 atcaaggacctgatggagagggggctcatcaagatggtgtcaatccactccagccagcag 342
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 343 atcttcaccagggc 356
>gb|CV055835.1|CV055835 BNEL124a11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL124a11 5' similar to putative 40S
ribosomal protein S25, mRNA sequence
Length = 591
Score = 305 bits (154), Expect = 1e-081
Identities = 274/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| |||||||||||||| || ||
Sbjct: 65 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtcgggcgga 124
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||
Sbjct: 125 gggaagcagaagaagaagaagtggagcaagggcaagcaaaaggagaaggtgaacaacgcg 184
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 185 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 244
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||||| || |||||||| || || || ||||| |||||
Sbjct: 245 atcaccccctccgtcctctccgagcgactcaggatcaatgggtctctggctcgcagggct 304
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| | |||| | | || ||||| ||||||| ||| ||||||| |||||||||
Sbjct: 305 atcaaggaccttatggagagggggctcatcaggatggtgtcgatccactccagccagcag 364
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 365 atcttcaccagggc 378
>gb|CV056561.1|CV056561 BNEL19B5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL19B5 5' similar to putative 40S
ribosomal protein S25, mRNA sequence
Length = 586
Score = 305 bits (154), Expect = 1e-081
Identities = 274/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| |||||||||||||| || ||
Sbjct: 65 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtcgggcgga 124
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||
Sbjct: 125 gggaagcagaagaagaagaagtggagcaagggcaagcaaaaggagaaggtgaacaacgcg 184
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 185 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 244
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||||| || |||||||| || || || ||||| |||||
Sbjct: 245 atcaccccctccgtcctctccgagcgactcaggatcaatgggtctctggctcgcagggct 304
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| | |||| | | || ||||| ||||||| ||| ||||||| |||||||||
Sbjct: 305 atcaaggaccttatggagagggggctcatcaggatggtgtcgatccactccagccagcag 364
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 365 atcttcaccagggc 378
>gb|CV057924.1|CV057924 BNEL32d3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL32d3 5' similar to putative 40S
ribosomal protein S25, mRNA sequence
Length = 547
Score = 305 bits (154), Expect = 1e-081
Identities = 274/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || | ||||| ||||||||||||||||| ||
Sbjct: 38 atggcgccgaagaaggagaaggccccggcggcttcgtccaagccggccaagtccggcggc 97
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 98 gggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcg 157
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 158 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 217
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||| || || ||||||||||||| || ||||||||||| || || ||||| |||||
Sbjct: 218 atcacgccatcagtcctctccgagcgactcaggatcaacgggtctctggctcgcagggct 277
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| |||||| | | || ||||| ||||||| || ||||||| |||||||||
Sbjct: 278 atcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcag 337
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 338 atcttcaccagggc 351
>gb|CV058555.1|CV058555 BNEL39c5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL39c5 5' similar to putative 40S
ribosomal protein S25, mRNA sequence
Length = 601
Score = 305 bits (154), Expect = 1e-081
Identities = 274/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| |||||||||||||| || ||
Sbjct: 63 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtcgggcgga 122
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||
Sbjct: 123 gggaagcagaagaagaagaagtggagcaagggcaagcaaaaggagaaggtgaacaacgcg 182
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 183 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 242
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||||| || |||||||| || || || ||||| |||||
Sbjct: 243 atcaccccctccgtcctctccgagcgactcaggatcaatgggtctctggctcgcagggct 302
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| | |||| | | || ||||| ||||||| ||| ||||||| |||||||||
Sbjct: 303 atcaaggaccttatggagagggggctcatcaggatggtgtcgatccactccagccagcag 362
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 363 atcttcaccagggc 376
>gb|CV062199.1|CV062199 BNEL77d5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL77d5 5' similar to putative 40S
ribosomal protein S25, mRNA sequence
Length = 562
Score = 305 bits (154), Expect = 1e-081
Identities = 274/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| |||||||||||||| || ||
Sbjct: 44 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtcgggcgga 103
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||
Sbjct: 104 gggaagcagaagaagaagaagtggagcaagggcaagcaaaaggagaaggtgaacaacgcg 163
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 164 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 223
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||||| || |||||||| || || || ||||| |||||
Sbjct: 224 atcaccccctccgtcctctccgagcgactcaggatcaatgggtctctggctcgcagggct 283
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| | |||| | | || ||||| ||||||| ||| ||||||| |||||||||
Sbjct: 284 atcaaggaccttatggagagggggctcatcaggatggtgtcgatccactccagccagcag 343
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 344 atcttcaccagggc 357
>gb|CV064007.1|CV064007 BNEL96c9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL96c9 5' similar to putative 40S
ribosomal protein S25, mRNA sequence
Length = 566
Score = 305 bits (154), Expect = 1e-081
Identities = 274/314 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||| ||||||||| || ||||||| |||||||||||||| || ||
Sbjct: 44 atggcgccgaagaaggagaaggccccggcggcgtcgtccaagccggccaagtcgggcgga 103
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|| ||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||
Sbjct: 104 gggaagcagaagaagaagaagtggagcaagggcaagcaaaaggagaaggtgaacaacgcg 163
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 164 gtgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcag 223
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||||| || |||||||| || || || ||||| |||||
Sbjct: 224 atcaccccctccgtcctctccgagcgactcaggatcaatgggtctctggctcgcagggct 283
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
||||||||| | |||| | | || ||||| ||||||| ||| ||||||| |||||||||
Sbjct: 284 atcaaggaccttatggagagggggctcatcaggatggtgtcgatccactccagccagcag 343
Query: 369 atctacaccagggc 382
|||| |||||||||
Sbjct: 344 atcttcaccagggc 357
>gb|BJ451335.1|BJ451335 BJ451335 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33j18 5', mRNA sequence
Length = 555
Score = 303 bits (153), Expect = 4e-081
Identities = 273/313 (87%)
Strand = Plus / Plus
Query: 70 tggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtg 129
|||| ||||||||||| ||||||||| || | ||||| ||||||||||||||||| || |
Sbjct: 35 tggcgccgaagaaggagaaggccccggcggcttcgtccaagccggccaagtccggcggcg 94
Query: 130 gcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcgg 189
| ||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 95 ggaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaacgcgg 154
Query: 190 tgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaaa 249
|||| ||||||||||| |||||||||||||||||| | |||||||||||||||||||| |
Sbjct: 155 tgctcttcgaccaggccacctacgacaagctgctcaccgaggtgcccaagtacaagcaga 214
Query: 250 tcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcca 309
|||| || || ||||||||||||| || ||||||||||| || || ||||| ||||| |
Sbjct: 215 tcacgccatcagtcctctccgagcgactcaggatcaacgggtctctggctcgcagggcta 274
Query: 310 tcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcaga 369
|||||||| |||||| | | || ||||| ||||||| || ||||||| ||||||||||
Sbjct: 275 tcaaggacctgatggagagggggctcatcaggatggtgtcaatccactccagccagcaga 334
Query: 370 tctacaccagggc 382
||| |||||||||
Sbjct: 335 tcttcaccagggc 347
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 98,986
Number of Sequences: 312970
Number of extensions: 98986
Number of successful extensions: 32449
Number of sequences better than 0.5: 173
Number of HSP's better than 0.5 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32241
Number of HSP's gapped (non-prelim): 180
length of query: 754
length of database: 175,134,539
effective HSP length: 19
effective length of query: 735
effective length of database: 169,188,109
effective search space: 124353260115
effective search space used: 124353260115
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)