BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.458
(708 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK125910.1|CK125910 BES1824111B1g01 BES1824 Hordeum vulg... 412 e-114
gb|AL505449.1|AL505449 AL505449 Hordeum vulgare Barke roots... 410 e-113
gb|AL508465.1|AL508465 AL508465 Hordeum vulgare Barke devel... 410 e-113
gb|BQ458543.1|BQ458543 HA04O19r HA Hordeum vulgare subsp. v... 410 e-113
gb|BQ458954.1|BQ458954 HA02L19r HA Hordeum vulgare subsp. v... 410 e-113
gb|BQ460637.1|BQ460637 HA06F17r HA Hordeum vulgare subsp. v... 410 e-113
gb|BQ463505.1|BQ463505 HI05I08r HI Hordeum vulgare subsp. v... 410 e-113
gb|BQ464392.1|BQ464392 HF02C10r HF Hordeum vulgare subsp. v... 410 e-113
gb|BQ468718.1|BQ468718 HM02B22r HM Hordeum vulgare subsp. v... 410 e-113
gb|BQ469605.1|BQ469605 HZ01E23r HZ Hordeum vulgare subsp. v... 410 e-113
gb|BQ470615.1|BQ470615 HX03I03r HX Hordeum vulgare subsp. v... 410 e-113
gb|BQ656638.1|BQ656638 HA02L19u HA Hordeum vulgare subsp. v... 410 e-113
gb|BQ657291.1|BQ657291 HA08P06u HA Hordeum vulgare subsp. v... 410 e-113
gb|BM377594.2|BM377594 EBem04_SQ003_J18_R embryo, 12 DPA, n... 410 e-113
gb|BM376374.2|BM376374 EBem05_SQ002_A18_R embryo, 14 DPA, n... 410 e-113
gb|BI779930.2|BI779930 EBem07_SQ001_K20_R embryo, 28 DPA, n... 410 e-113
gb|BM372146.2|BM372146 EBro03_SQ004_C11_R root, 3 week, wat... 410 e-113
gb|BI777576.2|BI777576 EBro04_SQ001_K06_R root, 3 week, sal... 410 e-113
gb|BQ753929.1|BQ753929 EBca01_SQ002_F13_R carpel, pre-anthe... 410 e-113
gb|BQ753994.1|BQ753994 EBca01_SQ002_H21_R carpel, pre-anthe... 410 e-113
gb|BQ764635.1|BQ764635 EBca01_SQ004_O08_R carpel, pre-anthe... 410 e-113
gb|BU967030.1|BU967030 HB03B12r BC Hordeum vulgare subsp. v... 410 e-113
gb|BU969026.1|BU969026 HB10F01r BC Hordeum vulgare subsp. v... 410 e-113
gb|BU976101.1|BU976101 HA03C07r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU976727.1|BU976727 HA10D05r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU977476.1|BU977476 HA11H23r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU977568.1|BU977568 HA11K10r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU978579.1|BU978579 HA13K10r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU980011.1|BU980011 HA18D09r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU980166.1|BU980166 HA18N24r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU980712.1|BU980712 HA21H11r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU981314.1|BU981314 HA23E04r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU981324.1|BU981324 HA23F04r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU982621.1|BU982621 HA27B16r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU983262.1|BU983262 HA29B18r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU984018.1|BU984018 HA31L22r HA Hordeum vulgare subsp. v... 410 e-113
gb|BU996271.1|BU996271 HM13B07r HM Hordeum vulgare subsp. v... 410 e-113
gb|BU996388.1|BU996388 HM13H03r HM Hordeum vulgare subsp. v... 410 e-113
gb|CA007912.1|CA007912 HU09F21r HU Hordeum vulgare subsp. v... 410 e-113
gb|CA023648.1|CA023648 HZ46P04r HZ Hordeum vulgare subsp. v... 410 e-113
gb|CA025611.1|CA025611 HZ52K13r HZ Hordeum vulgare subsp. v... 410 e-113
gb|CA025998.1|CA025998 HZ53M11r HZ Hordeum vulgare subsp. v... 410 e-113
gb|CA026200.1|CA026200 HZ55D15r HZ Hordeum vulgare subsp. v... 410 e-113
gb|CA026794.1|CA026794 HZ56P19r HZ Hordeum vulgare subsp. v... 410 e-113
gb|CA032217.1|CA032217 HX12G01r HX Hordeum vulgare subsp. v... 410 e-113
gb|BJ543795.1|BJ543795 BJ543795 K. Sato unpublished cDNA li... 410 e-113
gb|BJ545365.1|BJ545365 BJ545365 K. Sato unpublished cDNA li... 410 e-113
gb|BJ549471.1|BJ549471 BJ549471 K. Sato unpublished cDNA li... 410 e-113
gb|BJ549803.1|BJ549803 BJ549803 K. Sato unpublished cDNA li... 410 e-113
gb|BJ549906.1|BJ549906 BJ549906 K. Sato unpublished cDNA li... 410 e-113
gb|CB876149.1|CB876149 HX10G24w HX Hordeum vulgare subsp. v... 410 e-113
gb|CV053980.1|CV053980 BNEL105d4 Barley EST endosperm libra... 410 e-113
gb|CV057990.1|CV057990 BNEL33b4 Barley EST endosperm librar... 410 e-113
gb|CK122886.1|CK122886 BES1824101b09 BES1824 Hordeum vulgar... 410 e-113
gb|CK123905.1|CK123905 BES1824106b19 BES1824 Hordeum vulgar... 410 e-113
gb|CK124219.1|CK124219 BES1824108a10 BES1824 Hordeum vulgar... 410 e-113
gb|CK124509.1|CK124509 BES1824109g12 BES1824 Hordeum vulgar... 410 e-113
gb|CK124658.1|CK124658 BES1824109o09 BES1824 Hordeum vulgar... 410 e-113
gb|CK125793.1|CK125793 BES1824110n04 BES1824 Hordeum vulgar... 410 e-113
gb|BQ459410.1|BQ459410 HA01C18r HA Hordeum vulgare subsp. v... 408 e-112
gb|CV053587.1|CV053587 BNEL100h7 Barley EST endosperm libra... 408 e-112
gb|CV056187.1|CV056187 BNEL14H5 Barley EST endosperm librar... 408 e-112
gb|CV058762.1|CV058762 BNEL40f11 Barley EST endosperm libra... 408 e-112
gb|CA003402.1|CA003402 HS14F09r HS Hordeum vulgare subsp. v... 406 e-112
gb|BF621135.2|BF621135 HVSMEa0004F12f Hordeum vulgare seedl... 402 e-111
gb|BE602187.2|BE602187 HVSMEh0102O19f Hordeum vulgare 5-45 ... 402 e-111
gb|BI948174.1|BI948174 HVSMEl0008H16f Hordeum vulgare spike... 402 e-111
gb|AW982368.3|AW982368 HVSMEg0003B09f Hordeum vulgare pre-a... 402 e-111
gb|BE195066.3|BE195066 HVSMEh0088D07f Hordeum vulgare 5-45 ... 402 e-111
gb|CV054457.1|CV054457 BNEL10G1 Barley EST endosperm librar... 402 e-111
gb|BF630367.2|BF630367 HVSMEb0008O09f Hordeum vulgare seedl... 400 e-110
gb|BG416858.1|BG416858 HVSMEk0014O06f Hordeum vulgare testa... 400 e-110
gb|BE602339.3|BE602339 HVSMEh0098I23f Hordeum vulgare 5-45 ... 400 e-110
gb|BE601795.3|BE601795 HVSMEh0099I24f Hordeum vulgare 5-45 ... 400 e-110
gb|BE602885.3|BE602885 HVSMEh0100J11f Hordeum vulgare 5-45 ... 400 e-110
gb|BM377772.2|BM377772 EBem04_SQ004_C02_R embryo, 12 DPA, n... 400 e-110
gb|BM377987.2|BM377987 EBem04_SQ004_M24_R embryo, 12 DPA, n... 400 e-110
gb|BM375487.2|BM375487 EBem06_SQ003_H23_R embryo, 21 DPA, n... 400 e-110
gb|BM369250.2|BM369250 EBem07_SQ003_A18_R embryo, 28 DPA, n... 400 e-110
gb|BM369890.2|BM369890 EBem07_SQ004_O11_R embryo, 28 DPA, n... 400 e-110
gb|BI780503.2|BI780503 EBem08_SQ001_I18_R embryo, 40 DPA, n... 400 e-110
gb|BM098651.2|BM098651 EBem08_SQ003_K24_R embryo, 40 DPA, n... 400 e-110
gb|BM373377.2|BM373377 EBma04_SQ004_D15_R maternal, 10 DPA,... 400 e-110
gb|BI780203.2|BI780203 EBma08_SQ001_L05_R maternal, 28 DPA,... 400 e-110
gb|BQ760869.1|BQ760869 EBro03_SQ003_L07_R root, 3 week, wat... 400 e-110
gb|BQ763848.1|BQ763848 EBro03_SQ005_G15_R root, 3 week, wat... 400 e-110
gb|BQ764140.1|BQ764140 EBro03_SQ006_K09_R root, 3 week, wat... 400 e-110
gb|BQ765003.1|BQ765003 EBca01_SQ005_C14_R carpel, pre-anthe... 400 e-110
gb|BQ766152.1|BQ766152 EBro08_SQ005_N03_R root, 3 week, dro... 400 e-110
gb|BU978663.1|BU978663 HA13O12r HA Hordeum vulgare subsp. v... 400 e-110
gb|BU980404.1|BU980404 HA20J01r HA Hordeum vulgare subsp. v... 400 e-110
gb|BU982106.1|BU982106 HA25I16r HA Hordeum vulgare subsp. v... 400 e-110
gb|BU996933.1|BU996933 HI06F09r HI Hordeum vulgare subsp. v... 400 e-110
gb|BU997114.1|BU997114 HI06P05r HI Hordeum vulgare subsp. v... 400 e-110
gb|CA018232.1|CA018232 HV08A10r HV Hordeum vulgare subsp. v... 400 e-110
gb|CA018534.1|CA018534 HV08O13r HV Hordeum vulgare subsp. v... 400 e-110
gb|CA026065.1|CA026065 HZ53P18r HZ Hordeum vulgare subsp. v... 400 e-110
gb|CA026189.1|CA026189 HZ55D03r HZ Hordeum vulgare subsp. v... 400 e-110
gb|BJ550150.1|BJ550150 BJ550150 K. Sato unpublished cDNA li... 400 e-110
gb|CB858254.1|CB858254 HI06F09w HI Hordeum vulgare subsp. v... 400 e-110
gb|CK123044.1|CK123044 BES1824101n04 BES1824 Hordeum vulgar... 400 e-110
gb|CK124301.1|CK124301 BES1824108e22 BES1824 Hordeum vulgar... 400 e-110
gb|CK125369.1|CK125369 BES1824107n02 BES1824 Hordeum vulgar... 400 e-110
gb|CK125436.1|CK125436 BES1824108d03 BES1824 Hordeum vulgar... 400 e-110
gb|CK125668.1|CK125668 BES1824109k15 BES1824 Hordeum vulgar... 400 e-110
gb|AL502714.1|AL502714 AL502714 Hordeum vulgare Barke roots... 396 e-109
gb|BQ459494.1|BQ459494 HA08P06r HA Hordeum vulgare subsp. v... 396 e-109
gb|AL511568.1|AL511568 AL511568 Hordeum vulgare Barke devel... 394 e-108
gb|BF255545.3|BF255545 HVSMEf0007C10f Hordeum vulgare seedl... 394 e-108
gb|BM098354.2|BM098354 EBem08_SQ002_K08_R embryo, 40 DPA, n... 394 e-108
gb|BF624884.2|BF624884 HVSMEa0005A14f Hordeum vulgare seedl... 392 e-108
gb|BQ754310.1|BQ754310 EBca01_SQ003_I12_R carpel, pre-anthe... 392 e-108
gb|BU984103.1|BU984103 HF03A02r HF Hordeum vulgare subsp. v... 391 e-107
gb|BM371155.2|BM371155 EBro04_SQ003_K09_R root, 3 week, sal... 387 e-106
gb|BQ767967.1|BQ767967 EBro08_SQ010_G10_R root, 3 week, dro... 387 e-106
gb|BQ764722.1|BQ764722 EBca01_SQ004_O16_R carpel, pre-anthe... 385 e-105
gb|CV053876.1|CV053876 BNEL104b7 Barley EST endosperm libra... 385 e-105
gb|AL511674.1|AL511674 AL511674 Hordeum vulgare Barke devel... 383 e-105
gb|BQ758918.1|BQ758918 EBma07_SQ003_P05_R maternal, 21 DPA,... 381 e-104
gb|BM098409.2|BM098409 EBem08_SQ002_O14_R embryo, 40 DPA, n... 379 e-104
gb|BQ754375.1|BQ754375 EBca01_SQ003_M06_R carpel, pre-anthe... 379 e-104
gb|AJ436006.1|AJ436006 AJ436006 S00002 Hordeum vulgare subs... 373 e-102
gb|BJ549278.1|BJ549278 BJ549278 K. Sato unpublished cDNA li... 373 e-102
gb|BQ759892.1|BQ759892 EBpi05_SQ004_B23_R pistil, 8 DPA, no... 369 e-101
gb|BU983981.1|BU983981 HA31K02r HA Hordeum vulgare subsp. v... 367 e-100
gb|CB881376.1|CB881376 HM09K01w HM Hordeum vulgare subsp. v... 367 e-100
gb|CB881689.1|CB881689 HM10J10w HM Hordeum vulgare subsp. v... 367 e-100
gb|CB874832.1|CB874832 HX06H06w HX Hordeum vulgare subsp. v... 363 5e-099
gb|CV057742.1|CV057742 BNEL30c7 Barley EST endosperm librar... 363 5e-099
gb|CA029189.1|CA029189 HZ64H15r HZ Hordeum vulgare subsp. v... 359 8e-098
gb|CA030226.1|CA030226 HX06H06r HX Hordeum vulgare subsp. v... 349 8e-095
gb|BQ656988.1|BQ656988 HA01C18u HA Hordeum vulgare subsp. v... 343 5e-093
gb|BQ660797.1|BQ660797 HI05I08u HI Hordeum vulgare subsp. v... 343 5e-093
gb|BM371385.2|BM371385 EBma08_SQ002_I14_R maternal, 28 DPA,... 343 5e-093
gb|BQ766166.1|BQ766166 EBro08_SQ005_P06_R root, 3 week, dro... 343 5e-093
gb|BU976728.1|BU976728 HA10D05u HA Hordeum vulgare subsp. v... 343 5e-093
gb|CV055741.1|CV055741 BNEL123a1 Barley EST endosperm libra... 343 5e-093
gb|BI777005.2|BI777005 EBpi03_SQ001_K03_R pistil, 4 DPA, no... 341 2e-092
gb|CA027340.1|CA027340 HZ58J20r HZ Hordeum vulgare subsp. v... 341 2e-092
gb|CA005658.1|CA005658 HU09F21u HU Hordeum vulgare subsp. v... 335 1e-090
gb|BU977477.1|BU977477 HA11H23u HA Hordeum vulgare subsp. v... 333 5e-090
gb|BI948171.1|BI948171 HVSMEl0008H09f Hordeum vulgare spike... 327 3e-088
gb|BQ656319.1|BQ656319 HA04O19u HA Hordeum vulgare subsp. v... 323 4e-087
gb|CA016580.1|CA016580 HV08A10u HV Hordeum vulgare subsp. v... 317 3e-085
gb|BI951370.1|BI951370 HVSMEl0025L02f Hordeum vulgare spike... 313 4e-084
gb|CA020422.1|CA020422 HZ36E01r HZ Hordeum vulgare subsp. v... 313 4e-084
gb|BQ759657.1|BQ759657 EBpi05_SQ002_P10_R pistil, 8 DPA, no... 307 3e-082
gb|BF257452.2|BF257452 HVSMEf0012P08f Hordeum vulgare seedl... 301 2e-080
gb|BF623217.2|BF623217 HVSMEa0015M15f Hordeum vulgare seedl... 268 2e-070
gb|BQ460084.1|BQ460084 HA07E04r HA Hordeum vulgare subsp. v... 228 2e-058
gb|BU981734.1|BU981734 HA24H19r HA Hordeum vulgare subsp. v... 228 2e-058
gb|BU982031.1|BU982031 HA25F06r HA Hordeum vulgare subsp. v... 228 2e-058
gb|CA032910.1|CA032910 HX14I23r HX Hordeum vulgare subsp. v... 228 2e-058
gb|CB883541.1|CB883541 HQ02J02w HQ Hordeum vulgare subsp. v... 228 2e-058
gb|BQ661139.1|BQ661139 HM02B22u HM Hordeum vulgare subsp. v... 224 3e-057
gb|AJ435146.1|AJ435146 AJ435146 S00002 Hordeum vulgare subs... 220 5e-056
gb|AJ462367.1|AJ462367 AJ462367 S00002 Hordeum vulgare subs... 220 5e-056
gb|BQ657720.1|BQ657720 HA07E04u HA Hordeum vulgare subsp. v... 214 3e-054
gb|BM442116.2|BM442116 EBan01_SQ002_E04_R anther, yellow st... 214 3e-054
gb|CV057834.1|CV057834 BNEL31d11 Barley EST endosperm libra... 214 3e-054
gb|CV061345.1|CV061345 BNEL67g2 Barley EST endosperm librar... 214 3e-054
gb|CV061785.1|CV061785 BNEL71h3 Barley EST endosperm librar... 214 3e-054
gb|BQ759235.1|BQ759235 EBpi01_SQ002_A05_R pistil, 1 DPA, no... 204 3e-051
gb|BM443947.2|BM443947 EBem09_SQ002_D10_R embryo, 1 Day ger... 198 2e-049
gb|BU988036.1|BU988036 HF16H21r HF Hordeum vulgare subsp. v... 196 7e-049
gb|BQ763849.1|BQ763849 EBro03_SQ005_G16 _R root, 3 week, wa... 194 3e-048
gb|AJ460093.1|AJ460093 AJ460093 S00002 Hordeum vulgare subs... 192 1e-047
gb|BQ761958.1|BQ761958 EBpi01_SQ005_K11_R pistil, 1 DPA, no... 188 2e-046
gb|BU983506.1|BU983506 HA29P09r HA Hordeum vulgare subsp. v... 180 4e-044
gb|BI779365.2|BI779365 EBro01_SQ003_M19_R root, 3 week, hyd... 163 1e-038
gb|BM368589.1|BM368589 EBem08_SQ004_A19_R embryo, 40 DPA, n... 159 2e-037
gb|AJ462366.1|AJ462366 AJ462366 S00002 Hordeum vulgare subs... 143 9e-033
gb|CA028606.1|CA028606 HZ62J20r HZ Hordeum vulgare subsp. v... 139 1e-031
gb|AJ433754.1|AJ433754 AJ433754 S00002 Hordeum vulgare subs... 117 5e-025
gb|BQ754750.1|BQ754750 EBed01_SQ003_L09_R endosperm, 6 DPA,... 113 8e-024
gb|AL502900.1|AL502900 AL502900 Hordeum vulgare Barke roots... 109 1e-022
gb|BQ761302.1|BQ761302 EBro06_SQ001_A02_R root, 3 week, dro... 98 5e-019
gb|AJ461139.1|AJ461139 AJ461139 S00002 Hordeum vulgare subs... 94 7e-018
gb|BF254538.2|BF254538 HVSMEf0004E23f Hordeum vulgare seedl... 86 2e-015
gb|BI958629.1|BI958629 HVSMEn0016A02f Hordeum vulgare rachi... 72 3e-011
gb|CD662780.1|CD662780 UCRHV18_03ad09_b1 Drought-stressed D... 72 3e-011
gb|BU971660.1|BU971660 HB19E14r BC Hordeum vulgare subsp. v... 62 3e-008
gb|BF257820.3|BF257820 HVSMEf0013O21f Hordeum vulgare seedl... 58 4e-007
gb|BQ759295.1|BQ759295 EBpi01_SQ004_H05_R pistil, 1 DPA, no... 56 2e-006
gb|BG344338.1|BG344338 HVSMEg0008P09f Hordeum vulgare pre-a... 54 6e-006
gb|BG344455.1|BG344455 HVSMEg0009F05f Hordeum vulgare pre-a... 42 0.024
gb|BM099652.2|BM099652 EBes01_SQ003_N11_R embryo sac, 4-6 D... 42 0.024
gb|CA007788.1|CA007788 HU09A06r HU Hordeum vulgare subsp. v... 42 0.024
gb|AL502898.1|AL502898 AL502898 Hordeum vulgare Barke roots... 38 0.38
>gb|CK125910.1|CK125910 BES1824111B1g01 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G0111 5-PRIME, mRNA sequence
Length = 629
Score = 412 bits (208), Expect = e-114
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 78 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggn 137
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 138 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 197
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 198 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 257
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 258 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 317
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 318 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 377
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 378 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 416
>gb|AL505449.1|AL505449 AL505449 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08I06V 5', mRNA sequence
Length = 625
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 87 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 146
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 147 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 206
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 207 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 266
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 267 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 326
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 327 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 386
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 387 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 425
>gb|AL508465.1|AL508465 AL508465 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08N14V 5',
mRNA sequence
Length = 620
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 78 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 137
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 138 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 197
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 198 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 257
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 258 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 317
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 318 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 377
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 378 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 416
>gb|BQ458543.1|BQ458543 HA04O19r HA Hordeum vulgare subsp. vulgare cDNA clone HA04O19
5-PRIME, mRNA sequence
Length = 550
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 96 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 155
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 156 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 215
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 216 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 275
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 276 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 335
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 336 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 395
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 396 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 434
>gb|BQ458954.1|BQ458954 HA02L19r HA Hordeum vulgare subsp. vulgare cDNA clone HA02L19
5-PRIME, mRNA sequence
Length = 611
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 84 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 143
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 144 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 203
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 204 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 263
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 264 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 323
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 324 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 383
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 384 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 422
>gb|BQ460637.1|BQ460637 HA06F17r HA Hordeum vulgare subsp. vulgare cDNA clone HA06F17
5-PRIME, mRNA sequence
Length = 564
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 92 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 151
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 211
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 212 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 271
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 272 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 331
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 332 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 391
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 392 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 430
>gb|BQ463505.1|BQ463505 HI05I08r HI Hordeum vulgare subsp. vulgare cDNA clone HI05I08
5-PRIME, mRNA sequence
Length = 477
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 76 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 135
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 136 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 195
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 196 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 255
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 256 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 315
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 316 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 375
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 376 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 414
>gb|BQ464392.1|BQ464392 HF02C10r HF Hordeum vulgare subsp. vulgare cDNA clone HF02C10
5-PRIME, mRNA sequence
Length = 530
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 58 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 117
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 118 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 177
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 178 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 237
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 238 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 297
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 298 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 357
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 358 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 396
>gb|BQ468718.1|BQ468718 HM02B22r HM Hordeum vulgare subsp. vulgare cDNA clone HM02B22
5-PRIME, mRNA sequence
Length = 559
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 88 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 147
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 148 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 207
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 208 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 267
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 268 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 327
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 328 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 387
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 388 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 426
>gb|BQ469605.1|BQ469605 HZ01E23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01E23
5-PRIME, mRNA sequence
Length = 510
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 84 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 143
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 144 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 203
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 204 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 263
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 264 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 323
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 324 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 383
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 384 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 422
>gb|BQ470615.1|BQ470615 HX03I03r HX Hordeum vulgare subsp. vulgare cDNA clone HX03I03
5-PRIME, mRNA sequence
Length = 562
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 85 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 144
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 145 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 204
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 205 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 264
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 265 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 324
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 325 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 384
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 385 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 423
>gb|BQ656638.1|BQ656638 HA02L19u HA Hordeum vulgare subsp. vulgare cDNA clone HA02L19
3-PRIME, mRNA sequence
Length = 529
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Minus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 528 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 469
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 468 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 409
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 408 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 349
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 348 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 289
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 288 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 229
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 228 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 190
>gb|BQ657291.1|BQ657291 HA08P06u HA Hordeum vulgare subsp. vulgare cDNA clone HA08P06
3-PRIME, mRNA sequence
Length = 563
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Minus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 562 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 503
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 502 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 443
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 442 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 383
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 382 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 323
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 322 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 263
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 262 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 224
>gb|BM377594.2|BM377594 EBem04_SQ003_J18_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_J18 5', mRNA sequence
Length = 522
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 62 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 121
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 122 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 181
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 182 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 241
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 242 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 301
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 302 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 361
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 362 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 400
>gb|BM376374.2|BM376374 EBem05_SQ002_A18_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_A18 5', mRNA sequence
Length = 573
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 39 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 98
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 99 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 158
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 159 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 218
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 219 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 278
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 279 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 338
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 339 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 377
>gb|BI779930.2|BI779930 EBem07_SQ001_K20_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ001_K20 5', mRNA sequence
Length = 530
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 57 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 116
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 117 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 176
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 177 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 236
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 237 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 296
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 297 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 356
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 357 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 395
>gb|BM372146.2|BM372146 EBro03_SQ004_C11_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_C11 5', mRNA sequence
Length = 527
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 78 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 137
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 138 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 197
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 198 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 257
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 258 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 317
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 318 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 377
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 378 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 416
>gb|BI777576.2|BI777576 EBro04_SQ001_K06_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_K06 5', mRNA sequence
Length = 515
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 76 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 135
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 136 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 195
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 196 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 255
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 256 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 315
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 316 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 375
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 376 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 414
>gb|BQ753929.1|BQ753929 EBca01_SQ002_F13_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ002_F13 5', mRNA sequence
Length = 572
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 56 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 115
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 116 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 175
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 176 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 235
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 236 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 295
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 296 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 355
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 356 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 394
>gb|BQ753994.1|BQ753994 EBca01_SQ002_H21_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ002_H21 5', mRNA sequence
Length = 559
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 71 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 130
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 131 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 190
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 191 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 250
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 251 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 310
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 311 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 370
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 371 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 409
>gb|BQ764635.1|BQ764635 EBca01_SQ004_O08_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_O08 5', mRNA sequence
Length = 532
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 76 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 135
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 136 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 195
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 196 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 255
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 256 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 315
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 316 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 375
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 376 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 414
>gb|BU967030.1|BU967030 HB03B12r BC Hordeum vulgare subsp. vulgare cDNA clone HB03B12
5-PRIME, mRNA sequence
Length = 516
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 92 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 151
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 211
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 212 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 271
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 272 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 331
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 332 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 391
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 392 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 430
>gb|BU969026.1|BU969026 HB10F01r BC Hordeum vulgare subsp. vulgare cDNA clone HB10F01
5-PRIME, mRNA sequence
Length = 459
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 68 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 127
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 128 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 187
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 188 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 247
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 248 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 307
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 308 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 367
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 368 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 406
>gb|BU976101.1|BU976101 HA03C07r HA Hordeum vulgare subsp. vulgare cDNA clone HA03C07
5-PRIME, mRNA sequence
Length = 540
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 86 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 145
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 146 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 205
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 206 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 265
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 266 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 325
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 326 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 385
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 386 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 424
>gb|BU976727.1|BU976727 HA10D05r HA Hordeum vulgare subsp. vulgare cDNA clone HA10D05
5-PRIME, mRNA sequence
Length = 563
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 92 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 151
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 211
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 212 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 271
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 272 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 331
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 332 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 391
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 392 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 430
>gb|BU977476.1|BU977476 HA11H23r HA Hordeum vulgare subsp. vulgare cDNA clone HA11H23
5-PRIME, mRNA sequence
Length = 542
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 88 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 147
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 148 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 207
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 208 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 267
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 268 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 327
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 328 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 387
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 388 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 426
>gb|BU977568.1|BU977568 HA11K10r HA Hordeum vulgare subsp. vulgare cDNA clone HA11K10
5-PRIME, mRNA sequence
Length = 540
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 92 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 151
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 211
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 212 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 271
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 272 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 331
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 332 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 391
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 392 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 430
>gb|BU978579.1|BU978579 HA13K10r HA Hordeum vulgare subsp. vulgare cDNA clone HA13K10
5-PRIME, mRNA sequence
Length = 587
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 75 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 134
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 135 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 194
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 195 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 254
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 255 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 314
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 315 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 374
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 375 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 413
>gb|BU980011.1|BU980011 HA18D09r HA Hordeum vulgare subsp. vulgare cDNA clone HA18D09
5-PRIME, mRNA sequence
Length = 525
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 72 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 131
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 132 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 191
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 192 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 251
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 252 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 311
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 312 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 371
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 372 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 410
>gb|BU980166.1|BU980166 HA18N24r HA Hordeum vulgare subsp. vulgare cDNA clone HA18N24
5-PRIME, mRNA sequence
Length = 564
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 92 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 151
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 211
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 212 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 271
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 272 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 331
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 332 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 391
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 392 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 430
>gb|BU980712.1|BU980712 HA21H11r HA Hordeum vulgare subsp. vulgare cDNA clone HA21H11
5-PRIME, mRNA sequence
Length = 543
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 92 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 151
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 211
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 212 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 271
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 272 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 331
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 332 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 391
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 392 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 430
>gb|BU981314.1|BU981314 HA23E04r HA Hordeum vulgare subsp. vulgare cDNA clone HA23E04
5-PRIME, mRNA sequence
Length = 546
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 92 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 151
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 211
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 212 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 271
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 272 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 331
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 332 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 391
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 392 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 430
>gb|BU981324.1|BU981324 HA23F04r HA Hordeum vulgare subsp. vulgare cDNA clone HA23F04
5-PRIME, mRNA sequence
Length = 437
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 85 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 144
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 145 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 204
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 205 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 264
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 265 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 324
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 325 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 384
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 385 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 423
>gb|BU982621.1|BU982621 HA27B16r HA Hordeum vulgare subsp. vulgare cDNA clone HA27B16
5-PRIME, mRNA sequence
Length = 569
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 98 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 157
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 158 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 217
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 218 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 277
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 278 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 337
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 338 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 397
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 398 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 436
>gb|BU983262.1|BU983262 HA29B18r HA Hordeum vulgare subsp. vulgare cDNA clone HA29B18
5-PRIME, mRNA sequence
Length = 576
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 96 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 155
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 156 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 215
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 216 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 275
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 276 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 335
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 336 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 395
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 396 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 434
>gb|BU984018.1|BU984018 HA31L22r HA Hordeum vulgare subsp. vulgare cDNA clone HA31L22
5-PRIME, mRNA sequence
Length = 546
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 92 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 151
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 211
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 212 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 271
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 272 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 331
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 332 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 391
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 392 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 430
>gb|BU996271.1|BU996271 HM13B07r HM Hordeum vulgare subsp. vulgare cDNA clone HM13B07
5-PRIME, mRNA sequence
Length = 566
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 77 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 136
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 137 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 196
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 197 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 256
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 257 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 316
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 317 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 376
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 415
>gb|BU996388.1|BU996388 HM13H03r HM Hordeum vulgare subsp. vulgare cDNA clone HM13H03
5-PRIME, mRNA sequence
Length = 629
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 79 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 138
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 139 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 198
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 199 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 258
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 259 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 318
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 319 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 378
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 379 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 417
>gb|CA007912.1|CA007912 HU09F21r HU Hordeum vulgare subsp. vulgare cDNA clone HU09F21
5-PRIME, mRNA sequence
Length = 541
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 87 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 146
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 147 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 206
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 207 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 266
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 267 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 326
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 327 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 386
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 387 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 425
>gb|CA023648.1|CA023648 HZ46P04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46P04
5-PRIME, mRNA sequence
Length = 536
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 88 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 147
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 148 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 207
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 208 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 267
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 268 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 327
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 328 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 387
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 388 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 426
>gb|CA025611.1|CA025611 HZ52K13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52K13
5-PRIME, mRNA sequence
Length = 512
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 92 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 151
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 211
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 212 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 271
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 272 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 331
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 332 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 391
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 392 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 430
>gb|CA025998.1|CA025998 HZ53M11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53M11
5-PRIME, mRNA sequence
Length = 470
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 92 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 151
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 211
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 212 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 271
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 272 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 331
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 332 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 391
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 392 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 430
>gb|CA026200.1|CA026200 HZ55D15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55D15
5-PRIME, mRNA sequence
Length = 480
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 89 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 148
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 149 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 208
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 209 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 268
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 269 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 328
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 329 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 388
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 389 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 427
>gb|CA026794.1|CA026794 HZ56P19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56P19
5-PRIME, mRNA sequence
Length = 429
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 79 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 138
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 139 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 198
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 199 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 258
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 259 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 318
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 319 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 378
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 379 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 417
>gb|CA032217.1|CA032217 HX12G01r HX Hordeum vulgare subsp. vulgare cDNA clone HX12G01
5-PRIME, mRNA sequence
Length = 627
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 70 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 129
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 130 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 189
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 190 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 249
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 250 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 309
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 310 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 369
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 370 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 408
>gb|BJ543795.1|BJ543795 BJ543795 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak15a16 5', mRNA sequence
Length = 623
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 71 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 130
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 131 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 190
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 191 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 250
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 251 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 310
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 311 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 370
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 371 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 409
>gb|BJ545365.1|BJ545365 BJ545365 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak15a16 3', mRNA sequence
Length = 562
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Minus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 536 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 477
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 476 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 417
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 416 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 357
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 356 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 297
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 296 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 237
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 236 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 198
>gb|BJ549471.1|BJ549471 BJ549471 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35o21 5', mRNA sequence
Length = 493
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 99 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 158
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 159 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 218
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 219 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 278
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 279 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 338
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 339 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 398
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 399 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 437
>gb|BJ549803.1|BJ549803 BJ549803 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32l07 3', mRNA sequence
Length = 431
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Minus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 425 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 366
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 365 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 306
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 305 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 246
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 245 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 186
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 185 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 126
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 125 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 87
>gb|BJ549906.1|BJ549906 BJ549906 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35o21 3', mRNA sequence
Length = 565
Score = 410 bits (207), Expect = e-113
Identities = 306/339 (90%)
Strand = Plus / Minus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||
Sbjct: 479 atggtgaagggacgcacggggcagcgcgtcaggctctacgtcaggggcaccatcctcggc 420
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 419 ttcaagaggtccaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 360
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
||||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||
Sbjct: 359 aacaccaaggaggacgtggcgtggtacggcggcaagcgcctggcgtacgtgtacaaggcc 300
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 299 aagaccaagagcaacggcacccactaccgctgcctctggggcaagatcacccgcccgcac 240
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
|||||||||||||||||||||||| |||||| ||||||||| || | || ||||||||
Sbjct: 239 ggcaactccggcgtcgtccgcgcccagttcaagtccaacctccccgccgagtccatgggg 180
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaa 435
|| ||||||||||||||||||||||| ||||||||||||
Sbjct: 179 cgcaaggtcagggtgttcatgtacccgagcagcatctaa 141
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 72,340
Number of Sequences: 312970
Number of extensions: 72340
Number of successful extensions: 20747
Number of sequences better than 0.5: 189
Number of HSP's better than 0.5 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20466
Number of HSP's gapped (non-prelim): 271
length of query: 708
length of database: 175,134,539
effective HSP length: 19
effective length of query: 689
effective length of database: 169,188,109
effective search space: 116570607101
effective search space used: 116570607101
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)