BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.334
(1733 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mR... 1336 0.0
gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mR... 1314 0.0
gb|BM816374.1|BM816374 HB107C09_SK.ab1 HB Hordeum vulgare s... 914 0.0
gb|BJ549593.1|BJ549593 BJ549593 K. Sato unpublished cDNA li... 856 0.0
gb|CK125526.1|CK125526 BES1824109b11 BES1824 Hordeum vulgar... 841 0.0
gb|BG417286.1|BG417286 HVSMEk0017G08f Hordeum vulgare testa... 831 0.0
gb|AV914299.1|AV914299 AV914299 K. Sato unpublished cDNA li... 811 0.0
gb|AV915598.1|AV915598 AV915598 K. Sato unpublished cDNA li... 795 0.0
gb|BQ754642.1|BQ754642 EBed01_SQ003_G09_R endosperm, 6 DPA,... 787 0.0
gb|AV915153.1|AV915153 AV915153 K. Sato unpublished cDNA li... 785 0.0
gb|CK122717.1|CK122717 BES1824105i24 BES1824 Hordeum vulgar... 785 0.0
gb|CK124596.1|CK124596 BES1824109l18 BES1824 Hordeum vulgar... 785 0.0
gb|AL504181.1|AL504181 AL504181 Hordeum vulgare Barke roots... 773 0.0
gb|BJ549290.1|BJ549290 BJ549290 K. Sato unpublished cDNA li... 773 0.0
gb|BU990358.1|BU990358 HF24M19r HF Hordeum vulgare subsp. v... 771 0.0
gb|BU976776.1|BU976776 HA10E18r HA Hordeum vulgare subsp. v... 767 0.0
gb|BU987916.1|BU987916 HF16C02r HF Hordeum vulgare subsp. v... 761 0.0
gb|BU986839.1|BU986839 HF13A23r HF Hordeum vulgare subsp. v... 755 0.0
gb|BJ549470.1|BJ549470 BJ549470 K. Sato unpublished cDNA li... 753 0.0
gb|BJ549145.1|BJ549145 BJ549145 K. Sato unpublished cDNA li... 747 0.0
gb|BQ469013.1|BQ469013 HM03B19r HM Hordeum vulgare subsp. v... 743 0.0
gb|AV912964.1|AV912964 AV912964 K. Sato unpublished cDNA li... 739 0.0
gb|AV913005.1|AV913005 AV913005 K. Sato unpublished cDNA li... 739 0.0
gb|BU988451.1|BU988451 HF17K22r HF Hordeum vulgare subsp. v... 729 0.0
gb|BQ459855.1|BQ459855 HA07N23r HA Hordeum vulgare subsp. v... 722 0.0
gb|BQ664195.1|BQ664195 HV02E12u HV Hordeum vulgare subsp. v... 722 0.0
gb|CV062350.1|CV062350 BNEL79a7 Barley EST endosperm librar... 722 0.0
gb|BF261673.1|BF261673 HV_CEa0001O11f Hordeum vulgare seedl... 720 0.0
gb|BU981498.1|BU981498 HA23M24r HA Hordeum vulgare subsp. v... 712 0.0
gb|BJ549268.1|BJ549268 BJ549268 K. Sato unpublished cDNA li... 702 0.0
gb|BQ767681.1|BQ767681 EBro08_SQ009_F16_R root, 3 week, dro... 686 0.0
gb|BQ469204.1|BQ469204 HM03L09r HM Hordeum vulgare subsp. v... 676 0.0
gb|CA018867.1|CA018867 HV09O06r HV Hordeum vulgare subsp. v... 674 0.0
gb|BU981018.1|BU981018 HA22G09r HA Hordeum vulgare subsp. v... 672 0.0
gb|AV916575.1|AV916575 AV916575 K. Sato unpublished cDNA li... 664 0.0
gb|CA029597.1|CA029597 HZ65K18r HZ Hordeum vulgare subsp. v... 664 0.0
gb|CB882333.1|CB882333 HL01J03w HL Hordeum vulgare subsp. v... 664 0.0
gb|BM098251.2|BM098251 EBpi03_SQ002_P14_R pistil, 4 DPA, no... 652 0.0
gb|BJ549269.1|BJ549269 BJ549269 K. Sato unpublished cDNA li... 650 0.0
gb|AV913783.1|AV913783 AV913783 K. Sato unpublished cDNA li... 640 0.0
gb|BJ549338.1|BJ549338 BJ549338 K. Sato unpublished cDNA li... 636 0.0
gb|CA017920.1|CA017920 HV06M18r HV Hordeum vulgare subsp. v... 634 e-180
gb|BJ549141.1|BJ549141 BJ549141 K. Sato unpublished cDNA li... 632 e-180
gb|AV913228.1|AV913228 AV913228 K. Sato unpublished cDNA li... 630 e-179
gb|BF621650.2|BF621650 HVSMEa0011L18f Hordeum vulgare seedl... 624 e-177
gb|BJ549420.1|BJ549420 BJ549420 K. Sato unpublished cDNA li... 617 e-175
gb|CV064301.1|CV064301 BNEL9D12 Barley EST endosperm librar... 615 e-174
gb|BU981405.1|BU981405 HA23I11r HA Hordeum vulgare subsp. v... 605 e-171
gb|CA029698.1|CA029698 HZ65P05r HZ Hordeum vulgare subsp. v... 605 e-171
gb|BQ458831.1|BQ458831 HA04B09r HA Hordeum vulgare subsp. v... 603 e-171
gb|BF265932.3|BF265932 HV_CEa0013L11f Hordeum vulgare seedl... 599 e-169
gb|BQ458938.1|BQ458938 HA02M18r HA Hordeum vulgare subsp. v... 599 e-169
gb|AV915875.1|AV915875 AV915875 K. Sato unpublished cDNA li... 589 e-166
gb|BG299310.1|BG299310 HVSMEa0019F14f Hordeum vulgare seedl... 587 e-166
gb|BE216048.2|BE216048 HV_CEb0009E02f Hordeum vulgare seedl... 585 e-165
gb|AV916493.1|AV916493 AV916493 K. Sato unpublished cDNA li... 585 e-165
gb|BF262701.2|BF262701 HV_CEa0004L08f Hordeum vulgare seedl... 575 e-162
gb|CV055378.1|CV055378 BNEL119h8 Barley EST endosperm libra... 575 e-162
gb|BF065279.1|BF065279 HV_CEb0012A02f Hordeum vulgare seedl... 573 e-162
gb|BJ549905.1|BJ549905 BJ549905 K. Sato unpublished cDNA li... 567 e-160
gb|BQ469764.1|BQ469764 HZ01M23r HZ Hordeum vulgare subsp. v... 565 e-159
gb|AV917344.1|AV917344 AV917344 K. Sato unpublished cDNA li... 563 e-159
gb|BI952915.1|BI952915 HVSMEm0008F20f Hordeum vulgare green... 559 e-157
gb|BM098005.2|BM098005 EBpi03_SQ002_E14_R pistil, 4 DPA, no... 557 e-157
gb|CA016711.1|CA016711 HV06L02u HV Hordeum vulgare subsp. v... 547 e-154
gb|BU977735.1|BU977735 HA11P03r HA Hordeum vulgare subsp. v... 537 e-151
gb|BM098853.2|BM098853 EBpi05_SQ002_E03_R pistil, 8 DPA, no... 531 e-149
gb|CA018007.1|CA018007 HV07C03r HV Hordeum vulgare subsp. v... 525 e-147
gb|CK124943.1|CK124943 BES1824111A2b10 BES1824 Hordeum vulg... 504 e-141
gb|BQ761078.1|BQ761078 EBro04_SQ003_L24_R root, 3 week, sal... 482 e-134
gb|CK125302.1|CK125302 BES1824107k05 BES1824 Hordeum vulgar... 482 e-134
gb|BM098140.2|BM098140 EBpi03_SQ002_K16_R pistil, 4 DPA, no... 464 e-129
gb|BQ469109.1|BQ469109 HM03G18r HM Hordeum vulgare subsp. v... 454 e-126
gb|BI954494.1|BI954494 HVSMEm0018E04f Hordeum vulgare green... 452 e-125
gb|AV922343.1|AV922343 AV922343 K. Sato unpublished cDNA li... 438 e-121
gb|CK122467.1|CK122467 BES1824103j11 BES1824 Hordeum vulgar... 438 e-121
gb|BE558911.2|BE558911 HV_CEb0020M02f Hordeum vulgare seedl... 424 e-117
gb|BU972665.1|BU972665 HB22F20r BC Hordeum vulgare subsp. v... 422 e-116
gb|AV917720.1|AV917720 AV917720 K. Sato unpublished cDNA li... 420 e-116
gb|BJ549341.1|BJ549341 BJ549341 K. Sato unpublished cDNA li... 418 e-115
gb|AV918520.1|AV918520 AV918520 K. Sato unpublished cDNA li... 402 e-110
gb|BM377784.2|BM377784 EBem04_SQ004_C16_R embryo, 12 DPA, n... 402 e-110
gb|BU968593.1|BU968593 HB08A02r BC Hordeum vulgare subsp. v... 400 e-110
gb|BU982197.1|BU982197 HA25M21r HA Hordeum vulgare subsp. v... 400 e-110
gb|BU972623.1|BU972623 HB22D13r BC Hordeum vulgare subsp. v... 398 e-109
gb|BJ550219.1|BJ550219 BJ550219 K. Sato unpublished cDNA li... 391 e-107
gb|AV919325.1|AV919325 AV919325 K. Sato unpublished cDNA li... 389 e-106
gb|AV921390.1|AV921390 AV921390 K. Sato unpublished cDNA li... 385 e-105
gb|AV922522.1|AV922522 AV922522 K. Sato unpublished cDNA li... 383 e-104
gb|AV920280.1|AV920280 AV920280 K. Sato unpublished cDNA li... 371 e-101
gb|BI780112.2|BI780112 EBma08_SQ001_H01_R maternal, 28 DPA,... 369 e-100
gb|BQ459304.1|BQ459304 HA01J09r HA Hordeum vulgare subsp. v... 367 e-100
gb|BU979055.1|BU979055 HA15A14r HA Hordeum vulgare subsp. v... 367 e-100
gb|BJ548694.1|BJ548694 BJ548694 K. Sato unpublished cDNA li... 365 3e-099
gb|BJ550091.1|BJ550091 BJ550091 K. Sato unpublished cDNA li... 365 3e-099
gb|BJ549789.1|BJ549789 BJ549789 K. Sato unpublished cDNA li... 359 2e-097
gb|AV917759.1|AV917759 AV917759 K. Sato unpublished cDNA li... 347 8e-094
gb|BJ549790.1|BJ549790 BJ549790 K. Sato unpublished cDNA li... 347 8e-094
gb|BJ549815.1|BJ549815 BJ549815 K. Sato unpublished cDNA li... 347 8e-094
gb|BJ549858.1|BJ549858 BJ549858 K. Sato unpublished cDNA li... 347 8e-094
gb|AV920704.1|AV920704 AV920704 K. Sato unpublished cDNA li... 343 1e-092
gb|BI947959.1|BI947959 HVSMEl0007J20f Hordeum vulgare spike... 337 7e-091
gb|AV915883.1|AV915883 AV915883 K. Sato unpublished cDNA li... 337 7e-091
gb|CK123662.1|CK123662 BES1824105a04 BES1824 Hordeum vulgar... 337 7e-091
gb|AV918101.1|AV918101 AV918101 K. Sato unpublished cDNA li... 335 3e-090
gb|BM372811.2|BM372811 EBpi05_SQ003_P23_R pistil, 8 DPA, no... 329 2e-088
gb|BQ762911.1|BQ762911 EBro02_SQ006_C13_R root, 3 week, hyd... 321 4e-086
gb|AV919450.1|AV919450 AV919450 K. Sato unpublished cDNA li... 313 1e-083
gb|AV921130.1|AV921130 AV921130 K. Sato unpublished cDNA li... 311 4e-083
gb|BM816375.1|BM816375 HC03G10_T3.ab1 HC Hordeum vulgare su... 311 4e-083
gb|AV917353.1|AV917353 AV917353 K. Sato unpublished cDNA li... 307 7e-082
gb|AV918017.1|AV918017 AV918017 K. Sato unpublished cDNA li... 307 7e-082
gb|AV922532.1|AV922532 AV922532 K. Sato unpublished cDNA li... 307 7e-082
gb|BU983563.1|BU983563 HA30C14r HA Hordeum vulgare subsp. v... 305 3e-081
gb|BQ463263.1|BQ463263 HI04J04r HI Hordeum vulgare subsp. v... 299 2e-079
gb|BQ458477.1|BQ458477 HA05B17r HA Hordeum vulgare subsp. v... 287 6e-076
gb|BQ459248.1|BQ459248 HA01L24r HA Hordeum vulgare subsp. v... 283 1e-074
gb|CA026962.1|CA026962 HZ57H16r HZ Hordeum vulgare subsp. v... 280 1e-073
gb|AJ460129.1|AJ460129 AJ460129 S00002 Hordeum vulgare subs... 278 6e-073
gb|AJ460133.1|AJ460133 AJ460133 S00002 Hordeum vulgare subs... 274 9e-072
gb|BU997002.1|BU997002 HI06J08r HI Hordeum vulgare subsp. v... 268 6e-070
gb|BI948817.1|BI948817 HVSMEl0010O17f Hordeum vulgare spike... 266 2e-069
gb|CV054717.1|CV054717 BNEL112e3 Barley EST endosperm libra... 264 9e-069
gb|AJ460131.1|AJ460131 AJ460131 S00002 Hordeum vulgare subs... 262 3e-068
gb|CK124387.1|CK124387 BES1824108j17 BES1824 Hordeum vulgar... 256 2e-066
gb|BG417985.1|BG417985 HVSMEk0020D16f Hordeum vulgare testa... 254 9e-066
gb|BU976777.1|BU976777 HA10E18u HA Hordeum vulgare subsp. v... 250 1e-064
gb|CV058713.1|CV058713 BNEL40a5 Barley EST endosperm librar... 240 1e-061
gb|BI776416.2|BI776416 EBpi05_SQ001_D04_R pistil, 8 DPA, no... 236 2e-060
gb|BU980888.1|BU980888 HA21P22r HA Hordeum vulgare subsp. v... 236 2e-060
gb|BU995532.1|BU995532 HM10I16r HM Hordeum vulgare subsp. v... 236 2e-060
gb|CK122729.1|CK122729 BES1824105j13 BES1824 Hordeum vulgar... 236 2e-060
gb|BI780544.2|BI780544 EBes01_SQ001_C08_R embryo sac, 4-6 D... 232 3e-059
gb|AV916013.1|AV916013 AV916013 K. Sato unpublished cDNA li... 220 1e-055
gb|BQ656627.1|BQ656627 HA02M18u HA Hordeum vulgare subsp. v... 220 1e-055
gb|BU996345.1|BU996345 HM13E24r HM Hordeum vulgare subsp. v... 220 1e-055
gb|AJ460132.1|AJ460132 AJ460132 S00002 Hordeum vulgare subs... 212 3e-053
gb|CA016610.1|CA016610 HV06M18u HV Hordeum vulgare subsp. v... 208 5e-052
gb|AV913315.1|AV913315 AV913315 K. Sato unpublished cDNA li... 206 2e-051
gb|BQ661502.1|BQ661502 HM03L09u HM Hordeum vulgare subsp. v... 206 2e-051
gb|AJ460135.1|AJ460135 AJ460135 S00002 Hordeum vulgare subs... 204 7e-051
gb|BM368444.2|BM368444 EBem08_SQ002_E12_R embryo, 40 DPA, n... 204 7e-051
gb|CB875878.1|CB875878 HX09K02w HX Hordeum vulgare subsp. v... 196 2e-048
gb|BU979588.1|BU979588 HA16K04r HA Hordeum vulgare subsp. v... 194 7e-048
gb|AV918613.1|AV918613 AV918613 K. Sato unpublished cDNA li... 192 3e-047
gb|CA016177.1|CA016177 HV09O06u HV Hordeum vulgare subsp. v... 180 1e-043
gb|CA031322.1|CA031322 HX09K02r HX Hordeum vulgare subsp. v... 180 1e-043
gb|BQ658029.1|BQ658029 HA06B03u HA Hordeum vulgare subsp. v... 178 4e-043
gb|AV917382.1|AV917382 AV917382 K. Sato unpublished cDNA li... 174 6e-042
gb|BI960168.1|BI960168 HVSMEn0023I09f Hordeum vulgare rachi... 172 2e-041
gb|BI777034.2|BI777034 EBpi03_SQ001_L10_R pistil, 4 DPA, no... 172 2e-041
gb|BQ460362.1|BQ460362 HA09O13r HA Hordeum vulgare subsp. v... 161 9e-038
gb|AL500250.1|AL500250 AL500250 Hordeum vulgare Barke etiol... 157 1e-036
gb|BM816376.1|BM816376 HB02B03_T3.ab1 HB Hordeum vulgare su... 157 1e-036
gb|BQ656893.1|BQ656893 HA01J09u HA Hordeum vulgare subsp. v... 157 1e-036
gb|BQ661418.1|BQ661418 HM03G18u HM Hordeum vulgare subsp. v... 157 1e-036
gb|CA000206.1|CA000206 HS09K13u HS Hordeum vulgare subsp. v... 157 1e-036
gb|CA022990.1|CA022990 HZ44O22r HZ Hordeum vulgare subsp. v... 157 1e-036
gb|AV913052.1|AV913052 AV913052 K. Sato unpublished cDNA li... 141 9e-032
gb|BQ657586.1|BQ657586 HA07M18u HA Hordeum vulgare subsp. v... 141 9e-032
gb|BQ665993.1|BQ665993 HZ01M23u HZ Hordeum vulgare subsp. v... 139 3e-031
gb|BU977736.1|BU977736 HA11P03u HA Hordeum vulgare subsp. v... 139 3e-031
gb|BQ656554.1|BQ656554 HA04B09u HA Hordeum vulgare subsp. v... 131 8e-029
gb|AL512208.1|AL512208 AL512208 Hordeum vulgare Barke devel... 129 3e-028
gb|BQ460741.1|BQ460741 HA06B03r HA Hordeum vulgare subsp. v... 123 2e-026
gb|AL450963.1|AL450963 AL450963 Hordeum vulgare Barke etiol... 121 8e-026
gb|BE559092.2|BE559092 HV_CEb0022M04f Hordeum vulgare seedl... 115 5e-024
gb|CA028490.1|CA028490 HZ62C13r HZ Hordeum vulgare subsp. v... 113 2e-023
gb|BU980521.1|BU980521 HA20O12r HA Hordeum vulgare subsp. v... 107 1e-021
gb|BQ766286.1|BQ766286 EBro08_SQ005_E17_R root, 3 week, dro... 103 2e-020
gb|BU979542.1|BU979542 HA16H22r HA Hordeum vulgare subsp. v... 100 3e-019
gb|AL501515.1|AL501515 AL501515 Hordeum vulgare Barke roots... 90 3e-016
gb|AJ460134.1|AJ460134 AJ460134 S00002 Hordeum vulgare subs... 90 3e-016
gb|BG416656.2|BG416656 HVSMEk0014A09f Hordeum vulgare testa... 88 1e-015
gb|BI779593.1|BI779593 EBro01_SQ004_I08_R root, 3 week, hyd... 82 7e-014
gb|AJ432433.1|AJ432433 AJ432433 S00002 Hordeum vulgare subs... 82 7e-014
gb|AJ460130.1|AJ460130 AJ460130 S00002 Hordeum vulgare subs... 82 7e-014
gb|BQ467854.1|BQ467854 HR01C08r HR Hordeum vulgare subsp. v... 82 7e-014
gb|BI776216.2|BI776216 EBem04_SQ001_A02_R embryo, 12 DPA, n... 82 7e-014
gb|BQ756958.1|BQ756958 EBem10_SQ002_F05_R embryo, 2 Day ger... 82 7e-014
gb|BJ549615.1|BJ549615 BJ549615 K. Sato unpublished cDNA li... 82 7e-014
gb|BJ549711.1|BJ549711 BJ549711 K. Sato unpublished cDNA li... 82 7e-014
gb|BQ460202.1|BQ460202 HA06P03r HA Hordeum vulgare subsp. v... 80 3e-013
gb|AL500653.1|AL500653 AL500653 Hordeum vulgare Barke roots... 76 4e-012
gb|AV920987.1|AV920987 AV920987 K. Sato unpublished cDNA li... 70 3e-010
gb|AV922561.1|AV922561 AV922561 K. Sato unpublished cDNA li... 64 2e-008
gb|BJ549609.1|BJ549609 BJ549609 K. Sato unpublished cDNA li... 64 2e-008
gb|BJ550095.1|BJ550095 BJ550095 K. Sato unpublished cDNA li... 64 2e-008
gb|BE194414.2|BE194414 HVSMEh0085H15f Hordeum vulgare 5-45 ... 60 3e-007
gb|BF264489.1|BF264489 HV_CEa0009I24f Hordeum vulgare seedl... 60 3e-007
gb|BF265779.2|BF265779 HV_CEa0013F02f Hordeum vulgare seedl... 60 3e-007
gb|BM817335.1|BM817335 HC105F07_T3.ab1 HC Hordeum vulgare s... 60 3e-007
gb|BQ762284.1|BQ762284 EBro01_SQ005_I10 _R root, 3 week, hy... 60 3e-007
gb|BQ763675.1|BQ763675 EBro03_SQ005_I06_R root, 3 week, wat... 60 3e-007
gb|BJ544676.1|BJ544676 BJ544676 K. Sato unpublished cDNA li... 60 3e-007
gb|BJ546147.1|BJ546147 BJ546147 K. Sato unpublished cDNA li... 60 3e-007
gb|BJ546855.1|BJ546855 BJ546855 K. Sato unpublished cDNA li... 60 3e-007
gb|BJ549352.1|BJ549352 BJ549352 K. Sato unpublished cDNA li... 60 3e-007
gb|BJ549577.1|BJ549577 BJ549577 K. Sato unpublished cDNA li... 60 3e-007
gb|BJ549745.1|BJ549745 BJ549745 K. Sato unpublished cDNA li... 60 3e-007
gb|CB876813.1|CB876813 HP02H22T HP Hordeum vulgare subsp. v... 60 3e-007
gb|CD663284.1|CD663284 UCRHV18_05aa05_b1 Drought-stressed D... 60 3e-007
gb|AV915864.1|AV915864 AV915864 K. Sato unpublished cDNA li... 58 1e-006
gb|BQ657796.1|BQ657796 HA06P03u HA Hordeum vulgare subsp. v... 56 4e-006
gb|AL503510.1|AL503510 AL503510 Hordeum vulgare Barke roots... 54 2e-005
gb|BE455496.2|BE455496 HVSMEg0017H13f Hordeum vulgare pre-a... 54 2e-005
gb|BI952011.1|BI952011 HVSMEm0004D12f Hordeum vulgare green... 54 2e-005
gb|BE215777.1|BE215777 HV_CEb0008H10f Hordeum vulgare seedl... 54 2e-005
gb|BF256764.3|BF256764 HVSMEf0010P06f Hordeum vulgare seedl... 54 2e-005
gb|AV912942.1|AV912942 AV912942 K. Sato unpublished cDNA li... 54 2e-005
gb|AV915216.1|AV915216 AV915216 K. Sato unpublished cDNA li... 54 2e-005
gb|BM816212.1|BM816212 HB108A03_SK.ab1 HB Hordeum vulgare s... 54 2e-005
gb|BJ448778.1|BJ448778 BJ448778 K. Sato unpublished cDNA li... 54 2e-005
gb|BJ465438.1|BJ465438 BJ465438 K. Sato unpublished cDNA li... 54 2e-005
gb|BM375101.2|BM375101 EBem06_SQ002_F13_R embryo, 21 DPA, n... 54 2e-005
gb|BM443194.2|BM443194 EBro02_SQ003_A04_R root, 3 week, hyd... 54 2e-005
gb|BQ763247.1|BQ763247 EBro02_SQ007_N16_R root, 3 week, hyd... 54 2e-005
gb|BU986666.1|BU986666 HF12J02r HF Hordeum vulgare subsp. v... 54 2e-005
gb|BU987707.1|BU987707 HF15I15r HF Hordeum vulgare subsp. v... 54 2e-005
gb|BU987716.1|BU987716 HF15I24r HF Hordeum vulgare subsp. v... 54 2e-005
gb|BU990379.1|BU990379 HF24N16r HF Hordeum vulgare subsp. v... 54 2e-005
gb|BU994405.1|BU994405 HM06P10r HM Hordeum vulgare subsp. v... 54 2e-005
gb|BU998280.1|BU998280 HI10I23r HI Hordeum vulgare subsp. v... 54 2e-005
gb|BU998949.1|BU998949 HI12L01r HI Hordeum vulgare subsp. v... 54 2e-005
gb|BJ549339.1|BJ549339 BJ549339 K. Sato unpublished cDNA li... 54 2e-005
gb|BJ549384.1|BJ549384 BJ549384 K. Sato unpublished cDNA li... 54 2e-005
gb|CK124147.1|CK124147 BES1824107d09 BES1824 Hordeum vulgar... 54 2e-005
gb|BI948071.1|BI948071 HVSMEl0008B09f Hordeum vulgare spike... 52 6e-005
gb|AV913100.1|AV913100 AV913100 K. Sato unpublished cDNA li... 52 6e-005
gb|AV932209.1|AV932209 AV932209 K. Sato unpublished cDNA li... 52 6e-005
gb|AV932384.1|AV932384 AV932384 K. Sato unpublished cDNA li... 52 6e-005
gb|AV932642.1|AV932642 AV932642 K. Sato unpublished cDNA li... 52 6e-005
gb|AV933129.1|AV933129 AV933129 K. Sato unpublished cDNA li... 52 6e-005
gb|BJ469617.1|BJ469617 BJ469617 K. Sato unpublished cDNA li... 52 6e-005
gb|BJ472996.1|BJ472996 BJ472996 K. Sato unpublished cDNA li... 52 6e-005
gb|BQ468486.1|BQ468486 HM01G10T HM Hordeum vulgare subsp. v... 52 6e-005
gb|BQ755875.1|BQ755875 EBed07_SQ003_H20_R endosperm, 28 DPA... 50 2e-004
gb|AV929890.1|AV929890 AV929890 K. Sato unpublished cDNA li... 48 0.001
gb|AV920978.1|AV920978 AV920978 K. Sato unpublished cDNA li... 46 0.004
gb|BI955444.1|BI955444 HVSMEm0023C11f Hordeum vulgare green... 44 0.015
gb|BF064748.1|BF064748 HV_CEb0017M08f Hordeum vulgare seedl... 44 0.015
gb|BQ755953.1|BQ755953 EBem04_SQ003_L02_R embryo, 12 DPA, n... 44 0.015
gb|BE420773.1|BE420773 HWM002.D06 ITEC HWM Barley Leaf Libr... 42 0.061
gb|AL505185.1|AL505185 AL505185 Hordeum vulgare Barke roots... 42 0.061
gb|BI954073.1|BI954073 HVSMEm0016B11f Hordeum vulgare green... 42 0.061
gb|BF263763.1|BF263763 HV_CEa0007J17f Hordeum vulgare seedl... 42 0.061
gb|BF266191.2|BF266191 HV_CEa0014G22f Hordeum vulgare seedl... 42 0.061
gb|BF265506.3|BF265506 HV_CEa0012H17f Hordeum vulgare seedl... 42 0.061
gb|BF265531.3|BF265531 HV_CEa0012I06f Hordeum vulgare seedl... 42 0.061
gb|BF266428.3|BF266428 HV_CEa0015B20f Hordeum vulgare seedl... 42 0.061
gb|AV924795.1|AV924795 AV924795 K. Sato unpublished cDNA li... 42 0.061
gb|AV927016.1|AV927016 AV927016 K. Sato unpublished cDNA li... 42 0.061
gb|BM444715.1|BM444715 EBem09_SQ006_E07_R embryo, 1 Day ger... 42 0.061
gb|BM370849.2|BM370849 EBro04_SQ002_I09_R root, 3 week, sal... 42 0.061
gb|BJ547715.1|BJ547715 BJ547715 K. Sato unpublished cDNA li... 42 0.061
gb|CB877299.1|CB877299 HP04F09T HP Hordeum vulgare subsp. v... 42 0.061
gb|CB877735.1|CB877735 HP05P19T HP Hordeum vulgare subsp. v... 42 0.061
gb|CB877755.1|CB877755 HP06B10T HP Hordeum vulgare subsp. v... 42 0.061
gb|CB878122.1|CB878122 HP07G18T HP Hordeum vulgare subsp. v... 42 0.061
gb|CB882507.1|CB882507 HL02A24w HL Hordeum vulgare subsp. v... 42 0.061
gb|AL511422.1|AL511422 AL511422 Hordeum vulgare Barke devel... 40 0.24
gb|AL511768.1|AL511768 AL511768 Hordeum vulgare Barke devel... 40 0.24
gb|BE602100.3|BE602100 HVSMEh0102G24f Hordeum vulgare 5-45 ... 40 0.24
gb|BM444336.1|BM444336 EBem09_SQ004_N18_R embryo, 1 Day ger... 40 0.24
gb|AJ461222.1|AJ461222 AJ461222 S00002 Hordeum vulgare subs... 40 0.24
gb|BJ463743.1|BJ463743 BJ463743 K. Sato unpublished cDNA li... 40 0.24
gb|BJ465522.1|BJ465522 BJ465522 K. Sato unpublished cDNA li... 40 0.24
gb|BJ467757.1|BJ467757 BJ467757 K. Sato unpublished cDNA li... 40 0.24
gb|BJ467918.1|BJ467918 BJ467918 K. Sato unpublished cDNA li... 40 0.24
gb|BQ458733.1|BQ458733 HA04F22r HA Hordeum vulgare subsp. v... 40 0.24
gb|BQ767748.1|BQ767748 EBro08_SQ009_B19_R root, 3 week, dro... 40 0.24
gb|BQ768052.1|BQ768052 EBro08_SQ010_F17_R root, 3 week, dro... 40 0.24
gb|CA013113.1|CA013113 HT07G22r HT Hordeum vulgare subsp. v... 40 0.24
gb|CA030468.1|CA030468 HX07C12r HX Hordeum vulgare subsp. v... 40 0.24
gb|CB874360.1|CB874360 HX05A17w HX Hordeum vulgare subsp. v... 40 0.24
gb|CB875054.1|CB875054 HX07C12w HX Hordeum vulgare subsp. v... 40 0.24
>gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, partial cds
Length = 1472
Score = 1336 bits (674), Expect = 0.0
Identities = 1087/1224 (88%), Gaps = 3/1224 (0%)
Strand = Plus / Minus
Query: 390 catctagagctcgtcgtgcttctcatcatcagaatccttgctatcctcggcatcagagtc 449
|||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 1244 catctagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagaccc 1185
Query: 450 ggccttgtcctcgtctgccttctcatcgtcttcctcatcctctaggtcatcatcctcatc 509
|||||||| || | ||| || ||| | |||||||| || | ||||||||| || ||
Sbjct: 1184 agccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctc 1125
Query: 510 atccccacccttggcggcatcctcttcttccttctttttctcggcctcatcaaaagcagc 569
| || |||||| |||||||| ||||||||||| || || ||||| |||||||||||
Sbjct: 1124 a---ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagc 1068
Query: 570 cttttctgcctccttgtgcttgccccaggtctcctctgcaaaagtcttggccaaggcagg 629
||| || || |||||||||||| |||||||||| || ||||| ||||||||||| ||||
Sbjct: 1067 cttctcagcatccttgtgcttggcccaggtctcttcggcaaatgtcttggccaaagcagc 1008
Query: 630 gtcatcagtgatgatgatgttgtcaaacagagtgcccgatttaacctgccacagctcaat 689
|| |||||||||| ||||||||||||| || || || ||||||||||||||||| ||
Sbjct: 1007 atcgtcagtgatgagaatgttgtcaaacaacgttcctgacttaacctgccacagctcgat 948
Query: 690 gccaatgtacttcaagctgtcgaaggcgtaaatgtatggatcatccttaaaatctgggtt 749
||||||||||||| |||||| || ||||| ||||| |||||||||| || ||||||||
Sbjct: 947 tccaatgtacttcaggctgtcaaaagcgtagatgtaaggatcatcctggaagtctgggtt 888
Query: 750 gtcaatcataggtgccttccatttaccctggtagttcgggttcttgattttcttttgttt 809
| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 887 ggcaatcataggtgccttccatttgccctggtagttagggttcttgattttcttttgctt 828
Query: 810 ccatggtcccttgtattctgggttgggaatggtaggggcagtccattcaccatcttcctc 869
|||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 827 ccatgggcccttgtactctgggttggggatggttggggcagtccattcaccatcttcctc 768
Query: 870 atcgtcccagtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatc 929
||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 767 atcatcccaatcctcaggcttcttagcatcagggtcagtgacttccttgggaatatcatc 708
Query: 930 atagccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctc 989
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 707 atagccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctc 648
Query: 990 aggcttcttagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgta 1049
||||||||||| |||||||||||||||| ||| || |||||||||||||||||||||||
Sbjct: 647 tggcttcttagcttctgggtccttgatttccttgggaggaagaatatcccagtgctcgta 588
Query: 1050 gatgctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacg 1109
|||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 587 gatgcttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcg 528
Query: 1110 gatgatcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttcttgat 1169
||||||||||||||| ||||| | || |||||||||||| ||||||||||||||||||||
Sbjct: 527 gatgatcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttcttgat 468
Query: 1170 caagtggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtacccaca 1229
||| ||||||||||| | |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 467 caaatggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccaca 408
Query: 1230 gatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtctac 1289
|||||| |||||||||||||||| ||| | |||||| ||||| |||||||||||||| ||
Sbjct: 407 gatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttcttctggtcaac 348
Query: 1290 atcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcac 1349
|||||| || ||||| |||||||| ||||| ||||| |||||||||||||| ||||||||
Sbjct: 347 atcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatgcttcac 288
Query: 1350 agagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaat 1409
| |||||||||||| || ||||| ||||||||||||||||||||||| || || || ||
Sbjct: 287 cgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgcagagat 228
Query: 1410 ggcatagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatctccattcca 1469
||| ||||||||||| ||||| |||||||| |||||||||||||| |||||||||| |||
Sbjct: 227 ggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctccatgcca 168
Query: 1470 ttttcccgaagtgtggttccattcaccagccatgttctcatccttcttccactcggactt 1529
|||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 167 ttttccagatgtgtggttccattcaccagccatgttctcgtccttcttccactcagactt 108
Query: 1530 gacccaccgactttcccagccatcttcgaacttctcctggaagaagacctcccctgcgac 1589
||||||||| |||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct: 107 gacccaccggctttcccagccatcttcgaacttctcctggaagaagacgtcggcggcgac 48
Query: 1590 ggcggcgacagaggcgagcgcgag 1613
||||||||| ||||||||||||||
Sbjct: 47 ggcggcgacggaggcgagcgcgag 24
>gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, partial cds
Length = 1450
Score = 1314 bits (663), Expect = 0.0
Identities = 1073/1209 (88%), Gaps = 3/1209 (0%)
Strand = Plus / Minus
Query: 390 catctagagctcgtcgtgcttctcatcatcagaatccttgctatcctcggcatcagagtc 449
|||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 1252 catctagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagaccc 1193
Query: 450 ggccttgtcctcgtctgccttctcatcgtcttcctcatcctctaggtcatcatcctcatc 509
|||||||| || | ||| || ||| | |||||||| || | ||||||||| || ||
Sbjct: 1192 agccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctc 1133
Query: 510 atccccacccttggcggcatcctcttcttccttctttttctcggcctcatcaaaagcagc 569
| || |||||| |||||||| ||||||||||| || || ||||| |||||||||||
Sbjct: 1132 a---ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagc 1076
Query: 570 cttttctgcctccttgtgcttgccccaggtctcctctgcaaaagtcttggccaaggcagg 629
||| || || |||||||||||| |||||||||| || ||||| ||||||||||| ||||
Sbjct: 1075 cttctcagcatccttgtgcttggcccaggtctcttcggcaaatgtcttggccaaagcagc 1016
Query: 630 gtcatcagtgatgatgatgttgtcaaacagagtgcccgatttaacctgccacagctcaat 689
|| |||||||||| ||||||||||||| || || || ||||||||||||||||| ||
Sbjct: 1015 atcgtcagtgatgagaatgttgtcaaacaacgttcctgacttaacctgccacagctcgat 956
Query: 690 gccaatgtacttcaagctgtcgaaggcgtaaatgtatggatcatccttaaaatctgggtt 749
||||||||||||| |||||| || ||||| ||||| |||||||||| || ||||||||
Sbjct: 955 tccaatgtacttcaggctgtcaaaagcgtagatgtaaggatcatcctggaagtctgggtt 896
Query: 750 gtcaatcataggtgccttccatttaccctggtagttcgggttcttgattttcttttgttt 809
| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 895 ggcaatcataggtgccttccatttgccctggtagttagggttcttgattttcttttgctt 836
Query: 810 ccatggtcccttgtattctgggttgggaatggtaggggcagtccattcaccatcttcctc 869
|||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 835 ccatgggcccttgtactctgggttggggatggttggggcagtccattcaccatcttcctc 776
Query: 870 atcgtcccagtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatc 929
||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 775 atcatcccaatcctcaggcttcttagcatcagggtcagtgacttccttgggaatatcatc 716
Query: 930 atagccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctc 989
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 715 atagccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctc 656
Query: 990 aggcttcttagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgta 1049
||||||||||| |||||||||||||||| ||| || |||||||||||||||||||||||
Sbjct: 655 tggcttcttagcttctgggtccttgatttccttgggaggaagaatatcccagtgctcgta 596
Query: 1050 gatgctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacg 1109
|||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 595 gatgcttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcg 536
Query: 1110 gatgatcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttcttgat 1169
||||||||||||||| ||||| | || |||||||||||| ||||||||||||||||||||
Sbjct: 535 gatgatcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttcttgat 476
Query: 1170 caagtggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtacccaca 1229
||| ||||||||||| | |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 475 caaatggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccaca 416
Query: 1230 gatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtctac 1289
|||||| |||||||||||||||| ||| | |||||| ||||| |||||||||||||| ||
Sbjct: 415 gatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttcttctggtcaac 356
Query: 1290 atcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcac 1349
|||||| || ||||| |||||||| ||||| ||||| |||||||||||||| ||||||||
Sbjct: 355 atcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatgcttcac 296
Query: 1350 agagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaat 1409
| |||||||||||| || ||||| ||||||||||||||||||||||| || || || ||
Sbjct: 295 cgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgcagagat 236
Query: 1410 ggcatagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatctccattcca 1469
||| ||||||||||| ||||| |||||||| |||||||||||||| |||||||||| |||
Sbjct: 235 ggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctccatgcca 176
Query: 1470 ttttcccgaagtgtggttccattcaccagccatgttctcatccttcttccactcggactt 1529
|||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 175 ttttccagatgtgtggttccattcaccagccatgttctcgtccttcttccactcagactt 116
Query: 1530 gacccaccgactttcccagccatcttcgaacttctcctggaagaagacctcccctgcgac 1589
||||||||| |||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct: 115 gacccaccggctttcccagccatcttcgaacttctcctggaagaagacgtcggcggcgac 56
Query: 1590 ggcggcgac 1598
|||||||||
Sbjct: 55 ggcggcgac 47
>gb|BM816374.1|BM816374 HB107C09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB107C09_SK.ab1 similar to CALRETICULIN PRECURSOR
gi|6682833|dbj|BAA88900.1| (AB021259) calcium-binding
protein [Oryza sativa], mRNA sequence
Length = 934
Score = 914 bits (461), Expect = 0.0
Identities = 686/761 (90%)
Strand = Plus / Minus
Query: 553 gcctcatcaaaagcagccttttctgcctccttgtgcttgccccaggtctcctctgcaaaa 612
||||| |||||||||||||| || || |||||||||||| |||||||||| || |||||
Sbjct: 791 gcctcgtcaaaagcagccttctcagcatccttgtgcttggcccaggtctcttcggcaaat 732
Query: 613 gtcttggccaaggcagggtcatcagtgatgatgatgttgtcaaacagagtgcccgattta 672
||||||||||| |||| || |||||||||| ||||||||||||| || || || |||
Sbjct: 731 gtcttggccaaagcagcatcgtcagtgatgagaatgttgtcaaacaacgttcctgactta 672
Query: 673 acctgccacagctcaatgccaatgtacttcaagctgtcgaaggcgtaaatgtatggatca 732
|||||||||||||| || ||||||||||||| |||||| || ||||| ||||| ||||||
Sbjct: 671 acctgccacagctcgattccaatgtacttcaggctgtcaaaagcgtagatgtaaggatca 612
Query: 733 tccttaaaatctgggttgtcaatcataggtgccttccatttaccctggtagttcgggttc 792
|||| || ||||||||| |||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 611 tcctggaagtctgggttggcaatcataggtgccttccatttgccctggtagttagggttc 552
Query: 793 ttgattttcttttgtttccatggtcccttgtattctgggttgggaatggtaggggcagtc 852
|||||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||
Sbjct: 551 ttgattttcttttgcttccatgggcccttgtactctgggttggggatggttggggcagtc 492
Query: 853 cattcaccatcttcctcatcgtcccagtcctcaggcttcttagcatcagggtcaggaatt 912
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || |
Sbjct: 491 cattcaccatcttcctcatcatcccaatcctcaggcttcttagcatcagggtcagtaact 432
Query: 913 tccttgggaatatcatcatagccctctggcttcttgtcctcagggtcaggaatgtactcc 972
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 431 tccttgggaatatcatcatagccctctggcttgacgtcctcaggatcaggaatgtactcc 372
Query: 973 ttgtcatcccagtcctcaggcttcttagcctctgggtccttgattttcttagggggaaga 1032
||||||||||||||||| ||||||||||| |||||||||||||||| ||| || ||||||
Sbjct: 371 ttgtcatcccagtcctctggcttcttagcttctgggtccttgatttccttgggaggaaga 312
Query: 1033 atatcccagtgctcgtagatgctgccagtttgcttctcttcattatcaatgagaatgctg 1092
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 311 atatcccagtgctcgtagatgcttccagtttgcttctcttcattgtcaatgagaatgctg 252
Query: 1093 tatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaactgatcagtctcacaa 1152
||||| |||||||| ||||||||||||||||| |||| | || |||||||||||| |||
Sbjct: 251 tatgtagcatcagggcggatgatcaaagtgtacacatctgacagctgatcagtctcgcaa 192
Query: 1153 ggcacatccttcttgatcaagtggttcttgccatccttggtcaggatagtgtgaaccttc 1212
|||||||||||||||||||| ||||||||||| | |||||| || ||||||||||| |||
Sbjct: 191 ggcacatccttcttgatcaaatggttcttgccgttcttggtaagaatagtgtgaacgttc 132
Query: 1213 ttggtgctgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccacca 1272
||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||
Sbjct: 131 ttggtgctgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccg 72
Query: 1273 aatttcttctggtctacatcaccacccagcaatttgacgta 1313
|||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 71 aatttcttctggtcaacatcacctccaagcaacttgacgta 31
>gb|BJ549593.1|BJ549593 BJ549593 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39o09 5', mRNA sequence
Length = 684
Score = 856 bits (432), Expect = 0.0
Identities = 622/684 (90%), Gaps = 1/684 (0%)
Strand = Plus / Minus
Query: 850 gtccattcaccatcttcctcatcgtcccagtcctcaggcttcttagcatcagggtcagga 909
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 684 gtccattcaccatcttcctcatcatcccaatcctcaggcttcttagcatcagggtcagtg 625
Query: 910 atttccttgggaatatcatcatagccctctggcttcttgtcctcagggtcaggaatgtac 969
| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 624 acttccttgggaatatcatcatagccctctggcttgacgtcctcaggatcaggaatgtac 565
Query: 970 tccttgtcatcccagtcctcaggcttcttagcctctgggtccttgattttcttaggggga 1029
|||||||||||||||||||| ||||||||||| |||||||||||||||| ||| || |||
Sbjct: 564 tccttgtcatcccagtcctctggcttcttagcttctgggtccttgatttccttgggagga 505
Query: 1030 agaatatcccagtgctcgtagatgctgccagtttgcttctcttcattatcaatgagaatg 1089
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 504 agaatatcccagtgctcgtagatgcttccagtttgcttctcttcattgtcaatgagaatg 445
Query: 1090 ctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaactgatcagtctca 1149
|||||||| |||||||| ||||||||||||||||| ||||| | || ||||||||||||
Sbjct: 444 ctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgacagctgatcagtctcg 385
Query: 1150 caaggcacatccttcttgatcaagtggttcttgccatccttggtcaggatagtgtgaacc 1209
||||||||||||||||||||||| ||||||||||| | |||||| || ||||||||||||
Sbjct: 384 caaggcacatccttcttgatcaaatggttcttgccgttcttggtaagaatagtgtgaacc 325
Query: 1210 ttcttggtgctgtacccacagatatctggtccaaacataatgctgtaagatgtgtctcca 1269
|||||||||||||||||||||||||| |||||||||||||||| ||| | |||||| |||
Sbjct: 324 ttcttggtgctgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgcca 265
Query: 1270 ccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtca 1329
|| |||||||||||||| |||||||| || ||||| |||||||| ||||| ||||| |||
Sbjct: 264 ccgaatttcttctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatca 205
Query: 1330 agcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaac 1389
||||||||||| |||||||| | |||||||||||| || ||||| |||||||||||||||
Sbjct: 204 agcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaac 145
Query: 1390 tcagggtattcggctgaaatggcatagaacctgtaatcctcggaggtttgaatacctttg 1449
|||||||| || || || ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 144 tcagggtactccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttg 85
Query: 1450 tcctcggcatctccattccattttcccgaagtgtggttccattcaccagccatgtt-ctc 1508
||||| |||||||||| ||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 84 tcctcagcatctccatgccattttccagatgtgtggttccattcaccagccatgttnctc 25
Query: 1509 atccttcttccactcggacttgac 1532
|||||||||||||| ||||||||
Sbjct: 24 gtccttcttccactcagacttgac 1
>gb|CK125526.1|CK125526 BES1824109b11 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B119 5-PRIME, mRNA sequence
Length = 797
Score = 841 bits (424), Expect = 0.0
Identities = 620/685 (90%), Gaps = 1/685 (0%)
Strand = Plus / Minus
Query: 930 atagccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctc 989
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 795 atagccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctc 736
Query: 990 aggcttcttagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgta 1049
|| || ||||| ||||||||| |||||| | | || |||||||||||||||||||||||
Sbjct: 735 tggntttttagcttctgggtccntgatttccctgggaggaagaatatcccagtgctcgta 676
Query: 1050 gatgct-gccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggac 1108
|||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 675 gatgcttnccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggc 616
Query: 1109 ggatgatcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttcttga 1168
|||||||||||||||| ||||| | || |||||||||||| |||||||||||||||||||
Sbjct: 615 ggatgatcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttcttga 556
Query: 1169 tcaagtggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtacccac 1228
|||| ||||||||||| | |||||| || |||||||||||||||||||||||||||||||
Sbjct: 555 tcaaatggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccac 496
Query: 1229 agatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtcta 1288
||||||| |||||||||||||||||||| | |||||| ||||| |||||||||||||| |
Sbjct: 495 agatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttcttctggtcaa 436
Query: 1289 catcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttca 1348
||||||| || ||||| |||||||| ||||| |||||||||||||||||||| |||||||
Sbjct: 435 catcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgctcatgcttca 376
Query: 1349 cagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaa 1408
| | |||||||||||| || ||||| ||||||||||||||||||||||| || || || |
Sbjct: 375 ccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgccgaga 316
Query: 1409 tggcatagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatctccattcc 1468
|||| ||||||||||| ||||| |||||||| |||||||||||||| |||||||||| ||
Sbjct: 315 tggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctccatgcc 256
Query: 1469 attttcccgaagtgtggttccattcaccagccatgttctcatccttcttccactcggact 1528
||||||| || ||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 255 attttccagatgtgtggttccattcaccagccatgttctcgtccttcttccactcagact 196
Query: 1529 tgacccaccgactttcccagccatcttcgaacttctcctggaagaagacctcccctgcga 1588
|||||||||| |||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 195 tgacccaccggctttcccagccatcttcgaacttctcctggaagaagacgtcggcggcga 136
Query: 1589 cggcggcgacagaggcgagcgcgag 1613
|||||||||| ||||||||||||||
Sbjct: 135 cggcggcgacggaggcgagcgcgag 111
>gb|BG417286.1|BG417286 HVSMEk0017G08f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0017G08f, mRNA sequence
Length = 818
Score = 831 bits (419), Expect = 0.0
Identities = 689/777 (88%), Gaps = 2/777 (0%)
Strand = Plus / Minus
Query: 759 aggtgccttccatttaccctgg-tagttcgggttcttgattttcttttgtttccatggtc 817
|||||||||||| ||| || || ||||| |||| | |||||||||||||||||||||
Sbjct: 777 aggtgccttccacttagcccggatagttagggtcttggattttcttttgtttccatgggg 718
Query: 818 ccttgtattctgggttgggaatggtaggggcagtccattcaccatcttcctcatcgtccc 877
| ||||| | ||||||||| ||||| ||| ||||||||| ||||||||||||||| ||||
Sbjct: 717 cnttgtactttgggttggggatggttgggacagtccatttaccatcttcctcatcatccc 658
Query: 878 agtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatcatagccct 937
| || |||||||||||||||||||||||| | |||||||||||||||||||||||| |
Sbjct: 657 aatctccaggcttcttagcatcagggtcagtgacttccttgggaatatcatcatagcctt 598
Query: 938 ctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggcttct 997
||||||| ||| ||||| |||||||||||||| | |||||||||||||| |||||||
Sbjct: 597 ctggcttgacgtcgtcaggatcaggaatgtactcttgntcatcccagtcctctggcttct 538
Query: 998 tagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatgctgc 1057
|||| | |||||||||||||| ||| || ||||||||||| ||||||||||||||||| |
Sbjct: 537 tagcttatgggtccttgatttccttgggaggaagaatatctcagtgctcgtagatgcttc 478
Query: 1058 cagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatgatca 1117
||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 477 cagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatgatca 418
Query: 1118 aagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttcttgatcaagtggt 1177
||||||| ||||| | || |||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 417 aagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaatggt 358
Query: 1178 tcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtacccacagatatctg 1237
||||||| | |||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 357 tcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccacagatatcgg 298
Query: 1238 gtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtctacatcaccac 1297
||||||||||||||| ||| | |||||| ||||| |||||||||||||| |||||||| |
Sbjct: 297 gtccaaacataatgccgtagggtgtgtcgccaccgaatttcttctggtcaacatcacctc 238
Query: 1298 ccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaact 1357
| ||||| |||||||| ||||| ||||| |||||||||||||| |||||||| | |||||
Sbjct: 237 caagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatgcttcaccgtgaact 178
Query: 1358 gcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaatggcataga 1417
||||||| || ||||| ||||||||||||||||||||||| || || || ||||| ||||
Sbjct: 177 gcagcacgagtgtcttgtccttgttgctgaactcagggtactccgcagagatggcgtaga 118
Query: 1418 acctgtaatcctcggaggtttgaatacctttgtcctcggcatctccattccattttcccg 1477
||||||| ||||| |||||||| |||||||||||||| |||||||||| ||||||||| |
Sbjct: 117 acctgtagtcctcagaggtttggatacctttgtcctcagcatctccatgccattttccag 58
Query: 1478 -aagtgtggttccattcaccagccatgttctcatccttcttccactcggacttgacc 1533
| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 57 tatgtgtggttccattcaccagccatgttctcgtccttcttccactcagacttgacc 1
>gb|AV914299.1|AV914299 AV914299 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5j04 5', mRNA sequence
Length = 657
Score = 811 bits (409), Expect = 0.0
Identities = 586/645 (90%)
Strand = Plus / Minus
Query: 861 atcttcctcatcgtcccagtcctcaggcttcttagcatcagggtcaggaatttccttggg 920
|||||||||||| ||||| |||||||||||||||||||||||||||| | |||||||||
Sbjct: 657 atcttcctcatcatcccaatcctcaggcttcttagcatcagggtcagtgacttccttggg 598
Query: 921 aatatcatcatagccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatc 980
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 597 aatatcatcatagccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatc 538
Query: 981 ccagtcctcaggcttcttagcctctgggtccttgattttcttagggggaagaatatccca 1040
||||||||| ||||||||||| |||||||||||||||| ||| || ||||||||||||||
Sbjct: 537 ccagtcctctggcttcttagcttctgggtccttgatttccttgggaggaagaatatccca 478
Query: 1041 gtgctcgtagatgctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgc 1100
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 477 gtgctcgtagatgcttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagc 418
Query: 1101 atcaggacggatgatcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatc 1160
|||||| ||||||||||||||||| ||||| | || |||||||||||| |||||||||||
Sbjct: 417 atcagggcggatgatcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatc 358
Query: 1161 cttcttgatcaagtggttcttgccatccttggtcaggatagtgtgaaccttcttggtgct 1220
|||||||||||| ||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 357 cttcttgatcaaatggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgct 298
Query: 1221 gtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttctt 1280
||||||||||||||| |||||||||||||||| ||| | |||||| ||||| ||||||||
Sbjct: 297 gtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttctt 238
Query: 1281 ctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctc 1340
|||||| |||||||| || ||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct: 237 ctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctc 178
Query: 1341 gtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattc 1400
|||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| ||
Sbjct: 177 atgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtactc 118
Query: 1401 ggctgaaatggcatagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatc 1460
|| || ||||| ||||||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 117 cgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatc 58
Query: 1461 tccattccattttcccgaagtgtggttccattcaccagccatgtt 1505
||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 57 tccatgccattttccagatgtgtggttccattcaccagccatgtt 13
>gb|AV915598.1|AV915598 AV915598 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags15e01 5', mRNA sequence
Length = 653
Score = 795 bits (401), Expect = 0.0
Identities = 578/637 (90%)
Strand = Plus / Minus
Query: 869 catcgtcccagtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcat 928
|||| ||||| |||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 653 catcatcccaatcctcaggcttcttagcatcagggtcagtgacttccttgggaatatcat 594
Query: 929 catagccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcct 988
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 593 catagccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcct 534
Query: 989 caggcttcttagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgt 1048
| ||||||||||| |||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 533 ctggcttcttagcttctgggtccttgatttccttgggaggaagaatatcccagtgctcgt 474
Query: 1049 agatgctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggac 1108
||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 473 agatgcttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggc 414
Query: 1109 ggatgatcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttcttga 1168
|||||||||||||||| ||||| | || |||||||||||| |||||||||||||||||||
Sbjct: 413 ggatgatcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttcttga 354
Query: 1169 tcaagtggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtacccac 1228
|||| ||||||||||| | |||||| || |||||||||||||||||||||||||||||||
Sbjct: 353 tcaaatggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccac 294
Query: 1229 agatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtcta 1288
||||||| |||||||||||||||| ||| | |||||| ||||| |||||||||||||| |
Sbjct: 293 agatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttcttctggtcaa 234
Query: 1289 catcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttca 1348
||||||| || ||||| |||||||| ||||| ||||| |||||||||||||| |||||||
Sbjct: 233 catcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatgcttca 174
Query: 1349 cagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaa 1408
| | |||||||||||| || ||||| ||||||||||||||||||||||| || || || |
Sbjct: 173 ccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgcagaga 114
Query: 1409 tggcatagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatctccattcc 1468
|||| ||||||||||| ||||| |||||||| |||||||||||||| |||||||||| ||
Sbjct: 113 tggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctccatgcc 54
Query: 1469 attttcccgaagtgtggttccattcaccagccatgtt 1505
||||||| || ||||||||||||||||||||||||||
Sbjct: 53 attttccagatgtgtggttccattcaccagccatgtt 17
>gb|BQ754642.1|BQ754642 EBed01_SQ003_G09_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ003_G09 5', mRNA sequence
Length = 625
Score = 787 bits (397), Expect = 0.0
Identities = 565/621 (90%)
Strand = Plus / Minus
Query: 884 caggcttcttagcatcagggtcaggaatttccttgggaatatcatcatagccctctggct 943
|||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||
Sbjct: 625 caggcttcttagcatcagggtcagtgacttccttggggatatcatcatagccctctggct 566
Query: 944 tcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggcttcttagcct 1003
| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 565 tgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctctggcttcttagctt 506
Query: 1004 ctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatgctgccagttt 1063
||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||||||
Sbjct: 505 ctgggtccttgatttccttgggaggaagaatatcccagtgctcgtagatgcttccagttt 446
Query: 1064 gcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtgt 1123
||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 445 gcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtgt 386
Query: 1124 aaacatgagtcaactgatcagtctcacaaggcacatccttcttgatcaagtggttcttgc 1183
| ||||| | || |||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 385 acacatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgc 326
Query: 1184 catccttggtcaggatagtgtgaaccttcttggtgctgtacccacagatatctggtccaa 1243
| | |||||| || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 325 cgttcttggtaagaatagtgtgaaccttcttggtgctgtacccacagatatcgggtccaa 266
Query: 1244 acataatgctgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagca 1303
||||||||||||| | |||||| ||||| |||||||||||||| |||||||| || ||||
Sbjct: 265 acataatgctgtagggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagca 206
Query: 1304 atttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagca 1363
| |||||||| ||||| |||||||||||||||||||| |||||||| | |||||||||||
Sbjct: 205 acttgacgtaaccaccaccgcagtcaagcttctgctcatgcttcaccgtgaactgcagca 146
Query: 1364 ccagggtcttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgt 1423
| || ||||| ||||||||||||||||||||||| || || || ||||| ||||||||||
Sbjct: 145 cgagtgtcttgtccttgttgctgaactcagggtactccgccgagatggcgtagaacctgt 86
Query: 1424 aatcctcggaggtttgaatacctttgtcctcggcatctccattccattttcccgaagtgt 1483
| ||||| |||||||| |||||||||||||| |||||||||| ||||||||| || ||||
Sbjct: 85 agtcctcagaggtttggatacctttgtcctcagcatctccatgccattttccagatgtgt 26
Query: 1484 ggttccattcaccagccatgt 1504
|||||||||||||||||||||
Sbjct: 25 ggttccattcaccagccatgt 5
Score = 40.1 bits (20), Expect = 0.24
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 874 tcccagtcctcaggcttcttagcatcagggtc 905
||||||||||| ||||||||||| || |||||
Sbjct: 530 tcccagtcctctggcttcttagcttctgggtc 499
>gb|AV915153.1|AV915153 AV915153 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13b18 5', mRNA sequence
Length = 631
Score = 785 bits (396), Expect = 0.0
Identities = 570/628 (90%)
Strand = Plus / Minus
Query: 874 tcccagtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatcatag 933
||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 628 tcccaatcctcaggcttcttagcatcagggtcagtgacttccttgggaatatcatcatag 569
Query: 934 ccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggc 993
||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 568 ccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctctggc 509
Query: 994 ttcttagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatg 1053
|||||||| |||||||||||||||| ||| || |||||||||||||||||||||||||||
Sbjct: 508 ttcttagcttctgggtccttgatttccttgggaggaagaatatcccagtgctcgtagatg 449
Query: 1054 ctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatg 1113
|| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 448 cttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatg 389
Query: 1114 atcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttcttgatcaag 1173
||||||||||| ||||| | || |||||||||||| |||||||||||||||||||||||
Sbjct: 388 atcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaa 329
Query: 1174 tggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtacccacagata 1233
||||||||||| | |||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 328 tggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccacagata 269
Query: 1234 tctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtctacatca 1293
|| |||||||||||||||| ||| | |||||| ||||| |||||||||||||| ||||||
Sbjct: 268 tcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttcttctggtcaacatca 209
Query: 1294 ccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagag 1353
|| || ||||| |||||||| ||||| ||||| |||||||||||||| |||||||| | |
Sbjct: 208 cctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatgcttcaccgtg 149
Query: 1354 aactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaatggca 1413
||||||||||| || ||||| ||||||||||||||||||||||| || || || |||||
Sbjct: 148 aactgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgcagagatggcg 89
Query: 1414 tagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatctccattccatttt 1473
||||||||||| ||||| |||||||| |||||||||||||| |||||||||| |||||||
Sbjct: 88 tagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctccatgccatttt 29
Query: 1474 cccgaagtgtggttccattcaccagcca 1501
|| || ||||||||||||||||||||||
Sbjct: 28 ccagatgtgtggttccattcaccagcca 1
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 976 tcatcccagtcctcaggcttcttagcctctgggtc 1010
|||||||| ||||||||||||||||| || |||||
Sbjct: 631 tcatcccaatcctcaggcttcttagcatcagggtc 597
>gb|CK122717.1|CK122717 BES1824105i24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I245 5-PRIME, mRNA sequence
Length = 781
Score = 785 bits (396), Expect = 0.0
Identities = 600/668 (89%)
Strand = Plus / Minus
Query: 526 gcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttg 585
|||||||| ||||||||||| || || ||||| |||||||||||||| || || ||||||
Sbjct: 671 gcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttg 612
Query: 586 tgcttgccccaggtctcctctgcaaaagtcttggccaaggcagggtcatcagtgatgatg 645
|||||| |||||||||| || ||||| ||||||||||| |||| || ||||||||||
Sbjct: 611 tgcttggcccaggtctcttcggcaaatgtcttggccaaagcagcatcgtcagtgatgaga 552
Query: 646 atgttgtcaaacagagtgcccgatttaacctgccacagctcaatgccaatgtacttcaag 705
||||||||||||| || || || ||||||||||||||||| || ||||||||||||| |
Sbjct: 551 atgttgtcaaacaacgttcctgacttaacctgccacagctcgattccaatgtacttcagg 492
Query: 706 ctgtcgaaggcgtaaatgtatggatcatccttaaaatctgggttgtcaatcataggtgcc 765
||||| || ||||| ||||| |||||||||| || ||||||||| ||||||||||||||
Sbjct: 491 ctgtcaaaagcgtagatgtaaggatcatcctggaagtctgggttggcaatcataggtgcc 432
Query: 766 ttccatttaccctggtagttcgggttcttgattttcttttgtttccatggtcccttgtat 825
|||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||
Sbjct: 431 ttccatttgccctggtagttagggttcttgattttcttttgcttccatgggcccttgtac 372
Query: 826 tctgggttgggaatggtaggggcagtccattcaccatcttcctcatcgtcccagtcctca 885
||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 371 tctgggttggggatggttggggcagtccattcaccatcttcctcatcatcccaatcctca 312
Query: 886 ggcttcttagcatcagggtcaggaatttccttgggaatatcatcatagccctctggcttc 945
|||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||
Sbjct: 311 ggcttcttagcatcagggtcagtgacttccttggggatatcatcatagccctctggcttg 252
Query: 946 ttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggcttcttagcctct 1005
||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 251 acgtcctcaggatcaggaatgtactccttgtcatcccagtcctctggcttcttagcttct 192
Query: 1006 gggtccttgattttcttagggggaagaatatcccagtgctcgtagatgctgccagtttgc 1065
||||||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 191 gggtccttgatttccttgggaggaagaatatcccagtgctcgtagatgcttccagtttgc 132
Query: 1066 ttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaa 1125
||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 131 ttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtac 72
Query: 1126 acatgagtcaactgatcagtctcacaaggcacatccttcttgatcaagtggttcttgcca 1185
||||| | || |||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 71 acatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccg 12
Query: 1186 tccttggt 1193
| ||||||
Sbjct: 11 ttcttggt 4
>gb|CK124596.1|CK124596 BES1824109l18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010L189 5-PRIME, mRNA sequence
Length = 792
Score = 785 bits (396), Expect = 0.0
Identities = 600/668 (89%)
Strand = Plus / Minus
Query: 526 gcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttg 585
|||||||| ||||||||||| || || ||||| |||||||||||||| || || ||||||
Sbjct: 689 gcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttg 630
Query: 586 tgcttgccccaggtctcctctgcaaaagtcttggccaaggcagggtcatcagtgatgatg 645
|||||| |||||||||| || ||||| ||||||||||| |||| || ||||||||||
Sbjct: 629 tgcttggcccaggtctcttcggcaaatgtcttggccaaagcagcatcgtcagtgatgaga 570
Query: 646 atgttgtcaaacagagtgcccgatttaacctgccacagctcaatgccaatgtacttcaag 705
||||||||||||| || || || ||||||||||||||||| || ||||||||||||| |
Sbjct: 569 atgttgtcaaacaacgttcctgacttaacctgccacagctcgattccaatgtacttcagg 510
Query: 706 ctgtcgaaggcgtaaatgtatggatcatccttaaaatctgggttgtcaatcataggtgcc 765
||||| || ||||| ||||| |||||||||| || ||||||||| ||||||||||||||
Sbjct: 509 ctgtcaaaagcgtagatgtaaggatcatcctggaagtctgggttggcaatcataggtgcc 450
Query: 766 ttccatttaccctggtagttcgggttcttgattttcttttgtttccatggtcccttgtat 825
|||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||
Sbjct: 449 ttccatttgccctggtagttagggttcttgattttcttttgcttccatgggcccttgtac 390
Query: 826 tctgggttgggaatggtaggggcagtccattcaccatcttcctcatcgtcccagtcctca 885
||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 389 tctgggttggggatggttggggcagtccattcaccatcttcctcatcatcccaatcctca 330
Query: 886 ggcttcttagcatcagggtcaggaatttccttgggaatatcatcatagccctctggcttc 945
|||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||
Sbjct: 329 ggcttcttagcatcagggtcagtgacttccttggggatatcatcatagccctctggcttg 270
Query: 946 ttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggcttcttagcctct 1005
||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 269 acgtcctcaggatcaggaatgtactccttgtcatcccagtcctctggcttcttagcttct 210
Query: 1006 gggtccttgattttcttagggggaagaatatcccagtgctcgtagatgctgccagtttgc 1065
||||||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 209 gggtccttgatttccttgggaggaagaatatcccagtgctcgtagatgcttccagtttgc 150
Query: 1066 ttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaa 1125
||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 149 ttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtac 90
Query: 1126 acatgagtcaactgatcagtctcacaaggcacatccttcttgatcaagtggttcttgcca 1185
||||| | || |||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 89 acatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccg 30
Query: 1186 tccttggt 1193
| ||||||
Sbjct: 29 ttcttggt 22
>gb|AL504181.1|AL504181 AL504181 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04H09V 5', mRNA sequence
Length = 700
Score = 773 bits (390), Expect = 0.0
Identities = 606/677 (89%), Gaps = 1/677 (0%)
Strand = Plus / Minus
Query: 535 tcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttgtgcttgccc 594
||||| ||||| || || ||||| |||||||||||||| || || |||||||||||| ||
Sbjct: 698 tcttcnttcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgcttggcc 639
Query: 595 caggtctcctctgcaaaagtcttggccaaggcagggtcatcagtgatgatgatgttgtca 654
|||||||| || ||||| ||||||||||| |||| || |||||||||| |||||||||
Sbjct: 638 caggtctcttcggcaaatgtcttggccaaagcagcatcgtcagtgatgagaatgttgtca 579
Query: 655 aacagagtgcccgatttaacctgccacagctcaatgccaatgtacttcaagctgtcgaag 714
|||| || || || ||||||||||||||||| || ||||||||||||| |||||| ||
Sbjct: 578 aacaacgttcctgacttaacctgccacagctcgattccaatgtacttcaggctgtcaaaa 519
Query: 715 gcgtaaatgtatggatcatccttaaaatctgggttgtcaatcataggtgccttccattta 774
||||| ||||| |||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 518 gcgtagatgtaaggatcatcctggaagtctgggttggcaatcataggtgccttccatttg 459
Query: 775 ccctggtagttcgggttcttgattttcttttgtttccatggtcccttgtattctgggttg 834
||||||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 458 ccctggtagttagggttcttgattttcttttgcttccatgggcccttgtactctgggttg 399
Query: 835 ggaatggtaggggcagtccattcaccatcttcctcatcgtcccagtcctcaggcttctta 894
|| ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 398 gggatggttggggcagtccattcaccatcttcctcatcatcccaatcctcaggcttctta 339
Query: 895 gcatcagggtcaggaatttccttgggaatatcatcatagccctctggcttcttgtcctca 954
||||||||||||| | ||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 338 gcatcagggtcagtgacttccttggggatatcatcatagccctctggcttgacgtcctca 279
Query: 955 gggtcaggaatgtactccttgtcatcccagtcctcaggcttcttagcctctgggtccttg 1014
|| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 278 ggatcaggaatgtactccttgtcatcccagtcctctggcttcttagcttctgggtccttg 219
Query: 1015 attttcttagggggaagaatatcccagtgctcgtagatgctgccagtttgcttctcttca 1074
|||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 218 atttccttgggaggaagaatatcccagtgctcgtagatgcttccagtttgcttctcttca 159
Query: 1075 ttatcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtc 1134
|| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| | |
Sbjct: 158 ttgtcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgac 99
Query: 1135 aactgatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtc 1194
| |||||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||
Sbjct: 98 agctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggta 39
Query: 1195 aggatag-tgtgaacct 1210
|| |||| |||||||||
Sbjct: 38 agaatagctgtgaacct 22
>gb|BJ549290.1|BJ549290 BJ549290 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32p16 5', mRNA sequence
Length = 633
Score = 773 bits (390), Expect = 0.0
Identities = 574/634 (90%), Gaps = 1/634 (0%)
Strand = Plus / Minus
Query: 866 cctcatcgtcccagtcctcaggcttcttagcatcagggtcaggaatttccttgggaatat 925
||||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 633 cctcatcatcccaatcctcaggcttcttagcatcagggtcagtgacttccttgggaatat 574
Query: 926 catcatagccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagt 985
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 573 catcatagccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagt 514
Query: 986 cctcaggcttcttagcctctgggtccttgattttcttagggggaagaatatcccagtgct 1045
|||| ||||||||||| |||||||||||||||| ||| || |||||||||||||||||||
Sbjct: 513 cctctggcttcttagcttctgggtccttgatttccttgggaggaagaatatcccagtgct 454
Query: 1046 cgtagatgctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcag 1105
|||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 453 cgtagatgcttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcag 394
Query: 1106 gacggatgatcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttct 1165
| ||||||||||||||||| ||||| | || |||||||||||| ||||||||||||||||
Sbjct: 393 ggcggatgatcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttct 334
Query: 1166 tgatcaagtggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtacc 1225
||||||| ||||||||||| | |||||| || ||||||||||||||||||||||||||||
Sbjct: 333 tgatcaaatggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtacc 274
Query: 1226 cacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggt 1285
|||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||||||||
Sbjct: 273 cacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttcttctggt 214
Query: 1286 ctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgct 1345
| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||| ||||
Sbjct: 213 caacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatgct 154
Query: 1346 tcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctg 1405
|||| | |||||||||||| || ||||| ||||||||||||||||||||||| || || |
Sbjct: 153 tcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgcag 94
Query: 1406 aaatggcatagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatctccat 1465
| ||||| ||||||||||| ||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 93 agatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctccat 34
Query: 1466 tccattttcccgaagtgtggttccattcaccagc 1499
||||||||| || ||| ||||||||||||||||
Sbjct: 33 gccattttccagatgtg-ggttccattcaccagc 1
>gb|BU990358.1|BU990358 HF24M19r HF Hordeum vulgare subsp. vulgare cDNA clone HF24M19
5-PRIME, mRNA sequence
Length = 622
Score = 771 bits (389), Expect = 0.0
Identities = 558/613 (91%), Gaps = 1/613 (0%)
Strand = Plus / Minus
Query: 922 atatcatcatagccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcc 981
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 620 atatcatcatagccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcc 561
Query: 982 cagtcctcaggcttcttagcctctgggtccttgattttcttagggggaagaatatcccag 1041
|||||||| ||||||||||| |||||||||||||||| ||| || |||||||||||||||
Sbjct: 560 cagtcctctggcttcttagcttctgggtccttgatttccttgggaggaagaatatcccag 501
Query: 1042 tgctcgtagatgctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgca 1101
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 500 tgctcgtagatgcttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagca 441
Query: 1102 tcaggacggatgatcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatcc 1161
||||| ||||||||||||||||| ||||| | || |||||||||||| ||||||||||||
Sbjct: 440 tcagggcggatgatcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatcc 381
Query: 1162 ttcttgatcaagtggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctg 1221
||||||||||| ||||||||||| | |||||| || ||||||||||||||||||||||||
Sbjct: 380 ttcttgatcaaatggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctg 321
Query: 1222 tacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttc 1281
|||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||||
Sbjct: 320 tacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttcttc 261
Query: 1282 tggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcg 1341
||||| |||||||| || ||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 260 tggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgctca 201
Query: 1342 tgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcg 1401
|||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| ||
Sbjct: 200 tgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtactcc 141
Query: 1402 gctgaaatggcatagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatct 1461
|| || ||||| ||||||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 140 gccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatct 81
Query: 1462 ccattccattttcccgaagtgtggttccattcaccagccatgttctcatccttcttccac 1521
|||| ||||||||| || ||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 80 ccatgccattttccagatgtg-ggttccattcaccagccatgttctcgtccttcttccac 22
Query: 1522 tcggacttgaccc 1534
|| ||||||||||
Sbjct: 21 tcagacttgaccc 9
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 874 tcccagtcctcaggcttcttagcatcagggtcaggaatttccttggga 921
||||||||||| ||||||||||| || ||||| ||||||||||||
Sbjct: 563 tcccagtcctctggcttcttagcttctgggtccttgatttccttggga 516
>gb|BU976776.1|BU976776 HA10E18r HA Hordeum vulgare subsp. vulgare cDNA clone HA10E18
5-PRIME, mRNA sequence
Length = 633
Score = 767 bits (387), Expect = 0.0
Identities = 565/623 (90%), Gaps = 1/623 (0%)
Strand = Plus / Minus
Query: 874 tcccagtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatcatag 933
||||| |||||||||||||||||||||||||||| | ||||||||| ||||||||||||
Sbjct: 632 tcccaatcctcaggcttcttagcatcagggtcagtgacttccttggggatatcatcatag 573
Query: 934 ccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggc 993
||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 572 ccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctctggc 513
Query: 994 ttcttagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatg 1053
|||||||| |||||||||||||||| ||| || |||||||||||||||||||||||||||
Sbjct: 512 ttcttagcttctgggtccttgatttccttgggaggaagaatatcccagtgctcgtagatg 453
Query: 1054 ctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatg 1113
|| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 452 cttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatg 393
Query: 1114 atcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttcttgatcaag 1173
||||||||||| ||||| | || |||||||||||| |||||||||||||||||||||||
Sbjct: 392 atcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaa 333
Query: 1174 tggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtacccacagata 1233
||||||||||| | |||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 332 tggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccacagata 273
Query: 1234 tctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtctacatca 1293
|| |||||||||||||||||||| | |||||| ||||| |||||||||||||| ||||||
Sbjct: 272 tcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttcttctggtcaacatca 213
Query: 1294 ccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagag 1353
|| || ||||| |||||||| ||||| |||||||||||||||||||| |||||||| | |
Sbjct: 212 cctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgctcatgcttcaccgtg 153
Query: 1354 aactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaatggca 1413
||||||||||| || ||||| ||||||||||||||||||||||| || || || |||||
Sbjct: 152 aactgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgccgagatggcg 93
Query: 1414 tagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatctccattccatttt 1473
||||||||||| ||||| |||||||| |||||||||||||| |||||||||| |||||||
Sbjct: 92 tagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctccatgccatttt 33
Query: 1474 cccgaagtgtggttccattcacc 1496
|| || ||| |||||||||||||
Sbjct: 32 ccagatgtg-ggttccattcacc 11
Score = 42.1 bits (21), Expect = 0.061
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 978 atcccagtcctcaggcttcttagcctctgggtc 1010
|||||| ||||||||||||||||| || |||||
Sbjct: 633 atcccaatcctcaggcttcttagcatcagggtc 601
>gb|BU987916.1|BU987916 HF16C02r HF Hordeum vulgare subsp. vulgare cDNA clone HF16C02
5-PRIME, mRNA sequence
Length = 617
Score = 761 bits (384), Expect = 0.0
Identities = 546/600 (91%)
Strand = Plus / Minus
Query: 1014 gattttcttagggggaagaatatcccagtgctcgtagatgctgccagtttgcttctcttc 1073
||||| ||| || ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 617 gatttccttgggaggaagaatatcccagtgctcgtagatgcttccagtttgcttctcttc 558
Query: 1074 attatcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagt 1133
||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| |
Sbjct: 557 attgtcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcga 498
Query: 1134 caactgatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggt 1193
|| |||||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||
Sbjct: 497 cagctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggt 438
Query: 1194 caggatagtgtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgct 1253
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 437 aagaatagtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgct 378
Query: 1254 gtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgta 1313
||| | |||||| ||||| |||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 377 gtagggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgta 318
Query: 1314 gccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtctt 1373
||||| |||||||||||||||||||| |||||||| | |||||||||||| || |||||
Sbjct: 317 accaccaccgcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtctt 258
Query: 1374 atccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcgga 1433
||||||||||||||||||||||| || || || ||||| ||||||||||| ||||| ||
Sbjct: 257 gtccttgttgctgaactcagggtactccgccgagatggcgtagaacctgtagtcctcaga 198
Query: 1434 ggtttgaatacctttgtcctcggcatctccattccattttcccgaagtgtggttccattc 1493
|||||| |||||||||||||| |||||||||| ||||||||| || ||||||||||||||
Sbjct: 197 ggtttggatacctttgtcctcagcatctccatgccattttccagatgtgtggttccattc 138
Query: 1494 accagccatgttctcatccttcttccactcggacttgacccaccgactttcccagccatc 1553
||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 137 accagccatgttctcgtccttcttccactcagacttgacccaccggctttcccagccatc 78
Query: 1554 ttcgaacttctcctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcgag 1613
|||||||||||||||||||||||| || | |||||||||||||| ||||||||||||||
Sbjct: 77 ttcgaacttctcctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcgag 18
>gb|BU986839.1|BU986839 HF13A23r HF Hordeum vulgare subsp. vulgare cDNA clone HF13A23
5-PRIME, mRNA sequence
Length = 605
Score = 755 bits (381), Expect = 0.0
Identities = 541/593 (91%), Gaps = 1/593 (0%)
Strand = Plus / Minus
Query: 958 tcaggaatgtactccttgtcatcccagtcctcaggcttcttagcctctgggtccttgatt 1017
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 602 tcaggaatgtactccttgtcatcccagtcctctggcttcttagcttctgggtccttgatt 543
Query: 1018 ttcttagggggaagaatatcccagtgctcgtagatgctgccagtttgcttctcttcatta 1077
| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 542 tccttgggaggaagaatatcccagtgctcgtagatgcttccagtttgcttctcttcattg 483
Query: 1078 tcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaac 1137
|||||||||||||||||||| |||||||| ||||||||||||||||| ||||| | || |
Sbjct: 482 tcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgacagc 423
Query: 1138 tgatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcagg 1197
||||||||||| ||||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 422 tgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggtaaga 363
Query: 1198 atagtgtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgctgtaa 1257
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 362 atagtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgctgtag 303
Query: 1258 gatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagcca 1317
| |||||| ||||| |||||||||||||| |||||||| || ||||| |||||||| |||
Sbjct: 302 ggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaacca 243
Query: 1318 ccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcc 1377
|| |||||||||||||||||||| |||||||| | |||||||||||| || ||||| |||
Sbjct: 242 ccaccgcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtcc 183
Query: 1378 ttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggtt 1437
|||||||||||||||||||| || || || ||||| ||||||||||| ||||| ||||||
Sbjct: 182 ttgttgctgaactcagggtactccgccgagatggcgtagaacctgtagtcctcagaggtt 123
Query: 1438 tgaatacctttgtcctcggcatctccattccattttcccgaagtgtggttccattcacca 1497
|| |||||||||||||| |||||||||| ||||||||| || ||| ||||||||||||||
Sbjct: 122 tggatacctttgtcctcagcatctccatgccattttccagatgtg-ggttccattcacca 64
Query: 1498 gccatgttctcatccttcttccactcggacttgacccaccgactttcccagcc 1550
||||||||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 63 gccatgttctcgtccttcttccactcagacttgacccaccggctttcccagcc 11
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 874 tcccagtcctcaggcttcttagcatcagggtcaggaatttccttggga 921
||||||||||| ||||||||||| || ||||| ||||||||||||
Sbjct: 581 tcccagtcctctggcttcttagcttctgggtccttgatttccttggga 534
>gb|BJ549470.1|BJ549470 BJ549470 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35o18 5', mRNA sequence
Length = 638
Score = 753 bits (380), Expect = 0.0
Identities = 567/627 (90%), Gaps = 2/627 (0%)
Strand = Plus / Minus
Query: 874 tcccagtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatcatag 933
||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||
Sbjct: 635 tcccaatcctcaggcttnttagcatcagggtcagtgacttccttgggaatatcatcatag 576
Query: 934 ccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggc 993
||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 575 ccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctctggc 516
Query: 994 ttcttagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatg 1053
|||||||| |||||||||||||||| ||| || |||||||||||||||||||||||||||
Sbjct: 515 ttcttagcttctgggtccttgatttccttgggaggaagaatatcccagtgctcgtagatg 456
Query: 1054 ctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatg 1113
|| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 455 cttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatg 396
Query: 1114 atcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttcttgatcaag 1173
||||||||||| ||||| | || |||||||||||| |||||||||||||||||||||||
Sbjct: 395 atcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaa 336
Query: 1174 tggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtacccacagata 1233
||||||||||| | |||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 335 tggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccacagata 276
Query: 1234 tctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtctacatca 1293
|| |||||||||||||||| ||| | |||||| ||||| |||||||||||||| ||||||
Sbjct: 275 tcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttcttctggtcaacatca 216
Query: 1294 ccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagag 1353
|| || ||||| |||||||| ||||| ||||| |||||||||||||| |||||||| | |
Sbjct: 215 cctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatgcttcaccgtg 156
Query: 1354 aactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaatggca 1413
||||||||||| || ||||| ||||||||||||||||||||||| || || || |||||
Sbjct: 155 aactgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgcagagatggcg 96
Query: 1414 tagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatctccattccatttt 1473
||||||||||| ||||| |||||||| |||||||||||||| |||||||||| |||||||
Sbjct: 95 tagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctccatgccatttt 36
Query: 1474 ccc-gaagtgtggtt-ccattcaccag 1498
||| || |||||||| |||||||||||
Sbjct: 35 cccagatgtgtggttnccattcaccag 9
Score = 40.1 bits (20), Expect = 0.24
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 976 tcatcccagtcctcaggcttcttagcctctgggtc 1010
|||||||| ||||||||||| ||||| || |||||
Sbjct: 638 tcatcccaatcctcaggcttnttagcatcagggtc 604
>gb|BJ549145.1|BJ549145 BJ549145 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24e13 5', mRNA sequence
Length = 596
Score = 747 bits (377), Expect = 0.0
Identities = 539/593 (90%)
Strand = Plus / Minus
Query: 838 atggtaggggcagtccattcaccatcttcctcatcgtcccagtcctcaggcttcttagca 897
||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 596 atggttggggcagtccattcaccatcttcctcatcatcccaatcctcaggcttcttagca 537
Query: 898 tcagggtcaggaatttccttgggaatatcatcatagccctctggcttcttgtcctcaggg 957
|||||||||| | ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 536 tcagggtcagtgacttccttgggaatatcatcatagccctctggcttgacgtcctcagga 477
Query: 958 tcaggaatgtactccttgtcatcccagtcctcaggcttcttagcctctgggtccttgatt 1017
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 476 tcaggaatgtactccttgtcatcccagtcctctggcttcttagcttctgggtccttgatt 417
Query: 1018 ttcttagggggaagaatatcccagtgctcgtagatgctgccagtttgcttctcttcatta 1077
| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 416 tccttgggaggaagaatatcccagtgctcgtagatgcttccagtttgcttctcttcattg 357
Query: 1078 tcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaac 1137
|||||||||||||||||||| |||||||| ||||||||||||||||| ||||| | || |
Sbjct: 356 tcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgacagc 297
Query: 1138 tgatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcagg 1197
||||||||||| ||||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 296 tgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggtaaga 237
Query: 1198 atagtgtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgctgtaa 1257
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 236 atagtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgccgtag 177
Query: 1258 gatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagcca 1317
| |||||| ||||| |||||||||||||| |||||||| || ||||| |||||||| |||
Sbjct: 176 ggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaacca 117
Query: 1318 ccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcc 1377
|| ||||| |||||||||||||| |||||||| | |||||||||||| || ||||| |||
Sbjct: 116 ccaccgcaatcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtcc 57
Query: 1378 ttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctc 1430
|||||||||||||||||||| || || || ||||| ||||||||||| |||||
Sbjct: 56 ttgttgctgaactcagggtactccgcagagatggcgtagaacctgtagtcctc 4
>gb|BQ469013.1|BQ469013 HM03B19r HM Hordeum vulgare subsp. vulgare cDNA clone HM03B19
5-PRIME, mRNA sequence
Length = 571
Score = 743 bits (375), Expect = 0.0
Identities = 513/559 (91%)
Strand = Plus / Minus
Query: 721 atgtatggatcatccttaaaatctgggttgtcaatcataggtgccttccatttaccctgg 780
||||| |||||||||| || ||||||||| |||||||||||||||||||||| ||||||
Sbjct: 569 atgtaaggatcatcctggaagtctgggttggcaatcataggtgccttccatttgccctgg 510
Query: 781 tagttcgggttcttgattttcttttgtttccatggtcccttgtattctgggttgggaatg 840
||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 509 tagttagggttcttgattttcttttgcttccatgggcccttgtactctgggttggggatg 450
Query: 841 gtaggggcagtccattcaccatcttcctcatcgtcccagtcctcaggcttcttagcatca 900
|| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 449 gttggggcagtccattcaccatcttcctcatcatcccaatcctcaggcttcttagcatca 390
Query: 901 gggtcaggaatttccttgggaatatcatcatagccctctggcttcttgtcctcagggtca 960
||||||| | ||||||||| ||||||||||||||||||||||| ||||||||| |||
Sbjct: 389 gggtcagtgacttccttggggatatcatcatagccctctggcttgacgtcctcaggatca 330
Query: 961 ggaatgtactccttgtcatcccagtcctcaggcttcttagcctctgggtccttgattttc 1020
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
Sbjct: 329 ggaatgtactccttgtcatcccagtcctctggcttcttagcttctgggtccttgatttcc 270
Query: 1021 ttagggggaagaatatcccagtgctcgtagatgctgccagtttgcttctcttcattatca 1080
|| || ||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 269 ttgggaggaagaatatcccagtgctcgtagatgcttccagtttgcttctcttcattgtca 210
Query: 1081 atgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaactga 1140
||||||||||||||||| |||||||| ||||||||||||||||| ||||| | || ||||
Sbjct: 209 atgagaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgacagctga 150
Query: 1141 tcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcaggata 1200
|||||||| ||||||||||||||||||||||| ||||||||||| | |||||| || |||
Sbjct: 149 tcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggtaagaata 90
Query: 1201 gtgtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgctgtaagat 1260
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
Sbjct: 89 gtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgctgtagggt 30
Query: 1261 gtgtctccaccaaatttct 1279
||||| ||||| |||||||
Sbjct: 29 gtgtcgccaccgaatttct 11
>gb|AV912964.1|AV912964 AV912964 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11c19 5', mRNA sequence
Length = 588
Score = 739 bits (373), Expect = 0.0
Identities = 532/585 (90%)
Strand = Plus / Minus
Query: 1027 ggaagaatatcccagtgctcgtagatgctgccagtttgcttctcttcattatcaatgaga 1086
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 586 ggaagaatatcccagtgctcgtagatgcttccagtttgcttctcttcattgtcaatgaga 527
Query: 1087 atgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaactgatcagtc 1146
||||||||||| |||||||| ||||||||||||||||| ||||| | || ||||||||||
Sbjct: 526 atgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgacagctgatcagtc 467
Query: 1147 tcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcaggatagtgtga 1206
|| ||||||||||||||||||||||| ||||||||||| | |||||| || |||||||||
Sbjct: 466 tcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggtaagaatagtgtga 407
Query: 1207 accttcttggtgctgtacccacagatatctggtccaaacataatgctgtaagatgtgtct 1266
||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||
Sbjct: 406 accttcttggtgctgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcg 347
Query: 1267 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 1326
||||| |||||||||||||| |||||||| || ||||| |||||||| ||||| |||||
Sbjct: 346 ccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaa 287
Query: 1327 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1386
|||||||||||||| |||||||| | |||||||||||| || ||||| ||||||||||||
Sbjct: 286 tcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctg 227
Query: 1387 aactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggtttgaatacct 1446
||||||||||| || || || ||||| ||||||||||| ||||| |||||||| ||||||
Sbjct: 226 aactcagggtactccgcagagatggcgtagaacctgtagtcctcagaggtttggatacct 167
Query: 1447 ttgtcctcggcatctccattccattttcccgaagtgtggttccattcaccagccatgttc 1506
|||||||| |||||||||| ||||||||| || |||||||||||||||||||||||||||
Sbjct: 166 ttgtcctcagcatctccatgccattttccagatgtgtggttccattcaccagccatgttc 107
Query: 1507 tcatccttcttccactcggacttgacccaccgactttcccagccatcttcgaacttctcc 1566
|| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 106 tcgtccttcttccactcagacttgacccaccggctttcccagccatcttcgaacttctcc 47
Query: 1567 tggaagaagacctcccctgcgacggcggcgacagaggcgagcgcg 1611
||||||||||| || | |||||||||||||| ||||||||||||
Sbjct: 46 tggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcg 2
>gb|AV913005.1|AV913005 AV913005 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11g03 5', mRNA sequence
Length = 569
Score = 739 bits (373), Expect = 0.0
Identities = 521/569 (91%), Gaps = 1/569 (0%)
Strand = Plus / Minus
Query: 678 ccacagctcaatgccaatgtacttcaagctgtcgaaggcgtaaatgtatggatcatcctt 737
||||||||| || ||||||||||||| |||||| || ||||| ||||| ||||||||||
Sbjct: 569 ccacagctcgattccaatgtacttcaggctgtcaaaagcgtagatgtaaggatcatcctg 510
Query: 738 aaaatctgggttgtcaatcataggtgccttccatttaccctggtagttcgggttcttgat 797
|| ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 509 gaagtctgggttggcaatcataggtgccttccatttgccctggtagttagggttcttgat 450
Query: 798 tttcttttgtttccatggtcccttgtattctgggttgggaatggtaggggcagtccattc 857
||||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 449 tttcttttgcttccatgggcccttgtactctgggttggggatggttggggcagtccattc 390
Query: 858 accatcttcctcatcgtcccagtcctcaggcttcttagcatcagggtcaggaatttcctt 917
||||||||||||||| ||||| |||||||||||||||||||||||||||| | ||||||
Sbjct: 389 accatcttcctcatcatcccaatcctcaggcttcttagcatcagggtcagtgacttcctt 330
Query: 918 gggaatatcatcatagccctctggcttcttgtcctcagggtcaggaatgtactccttgtc 977
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 329 gggaatatcatcatagccctctggcttgacgtcctcaggatcaggaatgtactccttgtc 270
Query: 978 atcccagtcctcaggcttcttagcctctgggtccttgattttcttagggggaagaatatc 1037
|||||||||||| ||||||||||| |||||||||||||||| ||| || |||||||||||
Sbjct: 269 atcccagtcctctggcttcttagcttctgggtccttgatttccttgggaggaagaatatc 210
Query: 1038 ccagtgctcgtagatgctgccagtttgcttctcttcattatcaatgagaatgctgtatgt 1097
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 209 ccagtgctcgtagatgcttccagtttgcttctcttcattgtcaatgagaatgctgtatgt 150
Query: 1098 tgcatcaggacggatgatcaaagtgtaaacatgagtcaactgatcagtctcacaaggcac 1157
|||||||| ||||||||||||||||| ||||| | || |||||||||||| ||||||||
Sbjct: 149 agcatcagggcggatgatcaaagtgtacacatgcgacagctgatcagtctcgcaaggcac 90
Query: 1158 atccttcttgatcaagtggttcttgccatccttggtcaggatagtgtgaacctt-cttgg 1216
||||||||||||||| ||||||||||| | |||||| || |||||||||||||| |||||
Sbjct: 89 atccttcttgatcaaatggttcttgccgttcttggtaagaatagtgtgaaccttncttgg 30
Query: 1217 tgctgtacccacagatatctggtccaaac 1245
||||||||||||||||||| |||||||||
Sbjct: 29 tgctgtacccacagatatcgggtccaaac 1
>gb|BU988451.1|BU988451 HF17K22r HF Hordeum vulgare subsp. vulgare cDNA clone HF17K22
5-PRIME, mRNA sequence
Length = 616
Score = 729 bits (368), Expect = 0.0
Identities = 543/600 (90%), Gaps = 1/600 (0%)
Strand = Plus / Minus
Query: 1014 gattttcttagggggaagaatatcccagtgctcgtagatgctgccagtttgcttctcttc 1073
||||| ||| || ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 616 gatttccttgggaggaagaatatcccagtgctcgtagatgcttccagtttgcttctcttc 557
Query: 1074 attatcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagt 1133
||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| |
Sbjct: 556 attgtcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcga 497
Query: 1134 caactgatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggt 1193
|| |||||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||
Sbjct: 496 cagctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggt 437
Query: 1194 caggatagtgtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgct 1253
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 436 aagaatagtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgct 377
Query: 1254 gtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgta 1313
||| | |||||| ||||| |||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 376 gtagggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgta 317
Query: 1314 gccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtctt 1373
||||| |||||||||||||||||||| |||||||| | |||||||||||| || |||||
Sbjct: 316 accaccaccgcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtctt 257
Query: 1374 atccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcgga 1433
||||||||||||||||||||||| || || || ||||| ||||||||||| ||||| ||
Sbjct: 256 gtccttgttgctgaactcagggtactccgccgagatggcgtagaacctgtagtcctcaga 197
Query: 1434 ggtttgaatacctttgtcctcggcatctccattccattttcccgaagtgtggttccattc 1493
|||||| |||||||||||||| |||||||||| ||||||||| || |||| ||| | |||
Sbjct: 196 ggtttggatacctttgtcctcagcatctccatgccattttccagatgtgtagttac-ttc 138
Query: 1494 accagccatgttctcatccttcttccactcggacttgacccaccgactttcccagccatc 1553
||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 137 accagccatgttctcgtccttcttccactcagacttgacccaccggctttcccagccatc 78
Query: 1554 ttcgaacttctcctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcgag 1613
|||||||||||||||||||||||| || | |||||||||||||| ||||||||||||||
Sbjct: 77 ttcgaacttctcctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcgag 18
>gb|BQ459855.1|BQ459855 HA07N23r HA Hordeum vulgare subsp. vulgare cDNA clone HA07N23
5-PRIME, mRNA sequence
Length = 598
Score = 722 bits (364), Expect = 0.0
Identities = 526/580 (90%)
Strand = Plus / Minus
Query: 634 tcagtgatgatgatgttgtcaaacagagtgcccgatttaacctgccacagctcaatgcca 693
|||||||||| ||||||||||||| || || || ||||||||||||||||| || |||
Sbjct: 590 tcagtgatgagaatgttgtcaaacaacgttcctgacttaacctgccacagctcgattcca 531
Query: 694 atgtacttcaagctgtcgaaggcgtaaatgtatggatcatccttaaaatctgggttgtca 753
|||||||||| |||||| || ||||| ||||| |||||||||| || ||||||||| ||
Sbjct: 530 atgtacttcaggctgtcaaaagcgtagatgtaaggatcatcctggaagtctgggttggca 471
Query: 754 atcataggtgccttccatttaccctggtagttcgggttcttgattttcttttgtttccat 813
|||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct: 470 atcataggtgccttccatttgccctggtagttagggttcttgattttcttttgcttccat 411
Query: 814 ggtcccttgtattctgggttgggaatggtaggggcagtccattcaccatcttcctcatcg 873
|| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 410 gggcccttgtactctgggttggggatggttggggcagtccattcaccatcttcctcatca 351
Query: 874 tcccagtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatcatag 933
||||| |||||||||||||||||||||||||||| | ||||||||| ||||||||||||
Sbjct: 350 tcccaatcctcaggcttcttagcatcagggtcagtgacttccttggggatatcatcatag 291
Query: 934 ccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggc 993
||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 290 ccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctctggc 231
Query: 994 ttcttagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatg 1053
|||||||| |||||||||||||||| ||| || |||||||||||||||||||||||||||
Sbjct: 230 ttcttagcttctgggtccttgatttccttgggaggaagaatatcccagtgctcgtagatg 171
Query: 1054 ctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatg 1113
|| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 170 cttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatg 111
Query: 1114 atcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttcttgatcaag 1173
||||||||||| ||||| | || |||||||||||| |||||||||||||||||||||||
Sbjct: 110 atcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaa 51
Query: 1174 tggttcttgccatccttggtcaggatagtgtgaaccttct 1213
||||||||||| | |||||| || ||||||||||||||||
Sbjct: 50 tggttcttgccgttcttggtaagaatagtgtgaaccttct 11
>gb|BQ664195.1|BQ664195 HV02E12u HV Hordeum vulgare subsp. vulgare cDNA clone HV02E12
3-PRIME, mRNA sequence
Length = 673
Score = 722 bits (364), Expect = 0.0
Identities = 517/568 (91%)
Strand = Plus / Minus
Query: 1046 cgtagatgctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcag 1105
|||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 673 cgtagatgcttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcag 614
Query: 1106 gacggatgatcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttct 1165
| ||||||||||||||||| ||||| | || |||||||||||| ||||||||||||||||
Sbjct: 613 ggcggatgatcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttct 554
Query: 1166 tgatcaagtggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtacc 1225
||||||| ||||||||||| | |||||| || ||||||||||||||||||||||||||||
Sbjct: 553 tgatcaaatggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtacc 494
Query: 1226 cacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggt 1285
|||||||||| |||||||||||||||||||| | |||||| ||||| |||||||||||||
Sbjct: 493 cacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttcttctggt 434
Query: 1286 ctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgct 1345
| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||| ||||
Sbjct: 433 caacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgctcatgct 374
Query: 1346 tcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctg 1405
|||| | |||||||||||| || ||||| ||||||||||||||||||||||| || || |
Sbjct: 373 tcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgccg 314
Query: 1406 aaatggcatagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatctccat 1465
| ||||| ||||||||||| ||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 313 agatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctccat 254
Query: 1466 tccattttcccgaagtgtggttccattcaccagccatgttctcatccttcttccactcgg 1525
||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 253 gccattttccagatgtgtggttccattcaccagccatgttctcgtccttcttccactcag 194
Query: 1526 acttgacccaccgactttcccagccatcttcgaacttctcctggaagaagacctcccctg 1585
||||||||||||| |||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 193 acttgacccaccggctttcccagccatcttcgaacttctcctggaagaagacgtcggcgg 134
Query: 1586 cgacggcggcgacagaggcgagcgcgag 1613
||||||||||||| ||||||||||||||
Sbjct: 133 cgacggcggcgacggaggcgagcgcgag 106
>gb|CV062350.1|CV062350 BNEL79a7 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL79a7 5' similar to calreticulin - barley,
mRNA sequence
Length = 700
Score = 722 bits (364), Expect = 0.0
Identities = 533/588 (90%), Gaps = 1/588 (0%)
Strand = Plus / Minus
Query: 1027 ggaagaatatcccagtgctcgtagatgctgccagtttgcttctcttcattatcaatgaga 1086
|||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 689 ggaaaaatatcccagtgctcgtagatgctcccagtttgcttctcttcattgtcaatgaga 630
Query: 1087 atgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaactgatcagtc 1146
||||||||||| |||||||| ||||||||||||||||| ||||| | || ||||||||||
Sbjct: 629 atgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgacagctgatcagtc 570
Query: 1147 tcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcaggatagtgtga 1206
|| ||||||||||||||||||||||| ||||||||||| | |||||| || |||||||||
Sbjct: 569 tcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggtaagaatagtgtga 510
Query: 1207 accttcttggtgctgtacccacagatatctggtccaaacataatgctgtaagatgtgtct 1266
||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||
Sbjct: 509 accttcttggtgctgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcg 450
Query: 1267 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 1326
||||| |||||||||||||| |||||||| || ||||| |||||||| ||||| |||||
Sbjct: 449 ccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaa 390
Query: 1327 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1386
|||||||||||||| |||||||| | |||||||||||| || ||||| ||||||||||||
Sbjct: 389 tcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctg 330
Query: 1387 aactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggtttgaatacct 1446
||||||||||| || || || ||||| ||||||||||| ||||| |||||||| ||||||
Sbjct: 329 aactcagggtactccgcagagatggcgtagaacctgtagtcctcagaggtttggatacct 270
Query: 1447 ttgtcctcggcatctccattccattttcccgaagtgtggttccattcaccagccatgttc 1506
|||||||| |||||||||| ||||||||| || |||||||||||||||||||||||||||
Sbjct: 269 ttgtcctcagcatctccatgccattttccagatgtgtggttccattcaccagccatgttc 210
Query: 1507 tcatccttcttccactcggacttgacccaccgactttccca-gccatcttcgaacttctc 1565
|| |||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 209 tcgtccttcttccactcagacttgacccaccggctttcccaggccatcttcgaacttctc 150
Query: 1566 ctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcgag 1613
|||||||||||| || | |||||||||||||| ||||||||||||||
Sbjct: 149 ctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcgag 102
>gb|BF261673.1|BF261673 HV_CEa0001O11f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001O11f, mRNA sequence
Length = 841
Score = 720 bits (363), Expect = 0.0
Identities = 549/611 (89%)
Strand = Plus / Minus
Query: 1003 tctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatgctgccagtt 1062
|||||||||||||||| ||| || ||||||||||| ||||||||||||||||| ||||||
Sbjct: 718 tctgggtccttgatttccttgggaggaagaatatctcagtgctcgtagatgcttccagtt 659
Query: 1063 tgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtg 1122
|||| || |||| |||||||||||||||||||| |||||||| |||||||||| ||||
Sbjct: 658 tgctctgctccattgtcaatgagaatgctgtatgtagcatcaggccggatgatcagagtg 599
Query: 1123 taaacatgagtcaactgatcagtctcacaaggcacatccttcttgatcaagtggttcttg 1182
|| ||||| | || |||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 598 tacacatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttg 539
Query: 1183 ccatccttggtcaggatagtgtgaaccttcttggtgctgtacccacagatatctggtcca 1242
|| | |||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 538 ccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccacagatatcgggtcca 479
Query: 1243 aacataatgctgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagc 1302
|||||||||||||| | |||||| ||||| |||||||||||||| |||||||| || |||
Sbjct: 478 aacataatgctgtagggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagc 419
Query: 1303 aatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagc 1362
|| |||||||| ||||| |||||||||||||||||||| |||||||| | ||||||||||
Sbjct: 418 aacttgacgtaaccaccaccgcagtcaagcttctgctcatgcttcaccgtgaactgcagc 359
Query: 1363 accagggtcttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctg 1422
|| || ||||| ||||||||||||||||||||||| || || || ||||| |||||||||
Sbjct: 358 acgagtgtcttgtccttgttgctgaactcagggtactccgccgagatggcgtagaacctg 299
Query: 1423 taatcctcggaggtttgaatacctttgtcctcggcatctccattccattttcccgaagtg 1482
|| ||||| |||||||| |||||||||||||| |||| ||||| ||||||||| || |||
Sbjct: 298 tagtcctcagaggtttggatacctttgtcctcagcatttccatgccattttccagatgtg 239
Query: 1483 tggttccattcaccagccatgttctcatccttcttccactcggacttgacccaccgactt 1542
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 238 tggttccattcaccagccatgttctcgtccttcttccactcagacttgacccaccggctt 179
Query: 1543 tcccagccatcttcgaacttctcctggaagaagacctcccctgcgacggcggcgacagag 1602
||||||||||||||||||||||||||||| ||||| || | |||||||||||||| |||
Sbjct: 178 tcccagccatcttcgaacttctcctggaacaagacgtcggcggcgacggcggcgacggag 119
Query: 1603 gcgagcgcgag 1613
|||||||||||
Sbjct: 118 gcgagcgcgag 108
Score = 63.9 bits (32), Expect = 2e-008
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 886 ggcttcttagcatcagggtcaggaatttccttgggaatatcatcatag 933
||||| ||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 832 ggctttttagcatcagggtcaggaacttccttgggaaaatcataatag 785
>gb|BU981498.1|BU981498 HA23M24r HA Hordeum vulgare subsp. vulgare cDNA clone HA23M24
5-PRIME, mRNA sequence
Length = 587
Score = 712 bits (359), Expect = 0.0
Identities = 522/575 (90%), Gaps = 1/575 (0%)
Strand = Plus / Minus
Query: 922 atatcatcatagccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcc 981
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 584 atatcatcatagccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcc 525
Query: 982 cagtcctcaggcttcttagcctctgggtccttgattttcttagggggaagaatatcccag 1041
|||||||| ||||||||||| |||||||||||||||| ||| || |||||||||||||||
Sbjct: 524 cagtcctctggcttcttagcttctgggtccttgatttccttgggaggaagaatatcccag 465
Query: 1042 tgctcgtagatgctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgca 1101
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 464 tgctcgtagatgcttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagca 405
Query: 1102 tcaggacggatgatcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatcc 1161
||||| ||||||||||||||||| ||||| | || |||||||||||| ||||||||||||
Sbjct: 404 tcagggcggatgatcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatcc 345
Query: 1162 ttcttgatcaagtggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctg 1221
||||||||||| ||||||||||| | |||||| || ||||||||||||||||||||||||
Sbjct: 344 ttcttgatcaaatggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctg 285
Query: 1222 tacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttc 1281
|||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||||
Sbjct: 284 tacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttcttc 225
Query: 1282 tggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcg 1341
||||| |||||||| || ||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 224 tggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgctca 165
Query: 1342 tgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcg 1401
|||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| ||
Sbjct: 164 tgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtactcc 105
Query: 1402 gctgaaatggcatagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatct 1461
|| || ||||| ||||||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 104 gccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatct 45
Query: 1462 ccattccattttcccgaagtgtggttccattcacc 1496
|||| ||||||||| || ||| |||||||||||||
Sbjct: 44 ccatgccattttccagatgtg-ggttccattcacc 11
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 874 tcccagtcctcaggcttcttagcatcagggtcaggaatttccttggga 921
||||||||||| ||||||||||| || ||||| ||||||||||||
Sbjct: 527 tcccagtcctctggcttcttagcttctgggtccttgatttccttggga 480
>gb|BJ549268.1|BJ549268 BJ549268 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32e05 5', mRNA sequence
Length = 593
Score = 702 bits (354), Expect = 0.0
Identities = 529/586 (90%), Gaps = 1/586 (0%)
Strand = Plus / Minus
Query: 580 tccttgtgcttgccccaggtctcctctgcaaaagtcttggccaaggcagggtcatcagtg 639
|||||||||||| |||||||||| || ||||| ||||||||||| |||| || ||||||
Sbjct: 585 tccttgtgcttggcccaggtctcttcggcaaatgtcttggccaaagcagcatcgtcagtg 526
Query: 640 atgatgatgttgtcaaacagagtgcccgatttaacctgccacagctcaatgccaatgtac 699
|||| ||||||||||||| || || || ||||||||||||||||| || |||||||||
Sbjct: 525 atgagaatgttgtcaaacaacgttcctgacttaacctgccacagctcgattccaatgtac 466
Query: 700 ttcaagctgtcgaaggcgtaaatgtatggatcatccttaaaatctgggttgtcaatcata 759
|||| |||||| || ||||| ||||| |||||||||| || ||||||||| ||||||||
Sbjct: 465 ttcaggctgtcaaaagcgtagatgtaaggatcatcctggaagtctgggttggcaatcata 406
Query: 760 ggtgccttccatttaccctggtagttcgggttcttgattttcttttgtttccatggtccc 819
|||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct: 405 ggtgccttccatttgccctggtagttagggttcttgattttcttttgcttccatgggccc 346
Query: 820 ttgtattctgggttgggaatggtaggggcagtccattcaccatcttcctcatcgtcccag 879
||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 345 ttgtactctgggttggggatggttggggcagtccattcaccatcttcctcatcatcccaa 286
Query: 880 tcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatcatagccctct 939
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 285 tcctcaggcttcttagcatcagggtcagtgacttccttgggaatatcatcatagccctct 226
Query: 940 ggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggcttctta 999
||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 225 ggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctctggcttctta 166
Query: 1000 gcctctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatgctgcca 1059
|| |||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||
Sbjct: 165 gcttctgggtccttgatttccttgggaggaagaatatcccagtgctcgtagatgcttcca 106
Query: 1060 gtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatgatcaaa 1119
||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 105 gtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatgatcaaa 46
Query: 1120 gtgtaaacatgagtcaactgatcagtctcacaaggcacatccttct 1165
||||| ||||| | || || ||||||||| ||||||||||||||||
Sbjct: 45 gtgtacacatgcgacagct-atcagtctcgcaaggcacatccttct 1
>gb|BQ767681.1|BQ767681 EBro08_SQ009_F16_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_F16 5', mRNA sequence
Length = 644
Score = 686 bits (346), Expect = 0.0
Identities = 496/546 (90%)
Strand = Plus / Minus
Query: 1068 ctcttcattatcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaac 1127
||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 644 ctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtacac 585
Query: 1128 atgagtcaactgatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatc 1187
||| | || |||||||||||| ||||||||||||||||||||||| ||||||||||| |
Sbjct: 584 atgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgtt 525
Query: 1188 cttggtcaggatagtgtgaaccttcttggtgctgtacccacagatatctggtccaaacat 1247
|||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 524 cttggtaagaatagtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacat 465
Query: 1248 aatgctgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagcaattt 1307
||||||||| | |||||| ||||| |||||||||||||| |||||||| || ||||| ||
Sbjct: 464 aatgctgtagggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaactt 405
Query: 1308 gacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccag 1367
|||||| ||||| |||||||||||||||||||| |||||||| | |||||||||||| ||
Sbjct: 404 gacgtaaccaccaccgcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgag 345
Query: 1368 ggtcttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatc 1427
||||| ||||||||||||||||||||||| || || || ||||| ||||||||||| ||
Sbjct: 344 tgtcttgtccttgttgctgaactcagggtactccgccgagatggcgtagaacctgtagtc 285
Query: 1428 ctcggaggtttgaatacctttgtcctcggcatctccattccattttcccgaagtgtggtt 1487
||| |||||||| |||||||||||||| |||||||||| ||||||||| || ||||||||
Sbjct: 284 ctcagaggtttggatacctttgtcctcagcatctccatgccattttccagatgtgtggtt 225
Query: 1488 ccattcaccagccatgttctcatccttcttccactcggacttgacccaccgactttccca 1547
||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||
Sbjct: 224 ccattcaccagccatgttctcgtccttcttccactcagacttgacccaccggctttccca 165
Query: 1548 gccatcttcgaacttctcctggaagaagacctcccctgcgacggcggcgacagaggcgag 1607
|||||||||||||||||||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 164 gccatcttcgaacttctcctggaagaagacgtcggcggcgacggcggcgacggaggcgag 105
Query: 1608 cgcgag 1613
||||||
Sbjct: 104 cgcgag 99
>gb|BQ469204.1|BQ469204 HM03L09r HM Hordeum vulgare subsp. vulgare cDNA clone HM03L09
5-PRIME, mRNA sequence
Length = 652
Score = 676 bits (341), Expect = 0.0
Identities = 491/541 (90%)
Strand = Plus / Minus
Query: 1073 cattatcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgag 1132
|||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| |
Sbjct: 652 cattgtcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcg 593
Query: 1133 tcaactgatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttgg 1192
|| |||||||||||| ||||||||||||||||||||||| ||||||||||| | |||||
Sbjct: 592 acagctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttgg 533
Query: 1193 tcaggatagtgtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgc 1252
| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 532 taagaatagtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgc 473
Query: 1253 tgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgt 1312
|||| | |||||| ||||| |||||||||||||| |||||||| || ||||| |||||||
Sbjct: 472 tgtagggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgt 413
Query: 1313 agccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtct 1372
| ||||| |||||||||||||||||||| |||||||| | |||||||||||| || ||||
Sbjct: 412 aaccaccaccgcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtct 353
Query: 1373 tatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcgg 1432
| ||||||||||||||||||||||| || || || ||||| ||||||||||| ||||| |
Sbjct: 352 tgtccttgttgctgaactcagggtactccgccgagatggcgtagaacctgtagtcctcag 293
Query: 1433 aggtttgaatacctttgtcctcggcatctccattccattttcccgaagtgtggttccatt 1492
||||||| |||||||||||||| |||||||||| ||||||||| || |||||||||||||
Sbjct: 292 aggtttggatacctttgtcctcagcatctccatgccattttccagatgtgtggttccatt 233
Query: 1493 caccagccatgttctcatccttcttccactcggacttgacccaccgactttcccagccat 1552
|||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 232 caccagccatgttctcgtccttcttccactcagacttgacccaccggctttcccagccat 173
Query: 1553 cttcgaacttctcctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcga 1612
||||||||||||||||||||||||| || | |||||||||||||| |||||||||||||
Sbjct: 172 cttcgaacttctcctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcga 113
Query: 1613 g 1613
|
Sbjct: 112 g 112
>gb|CA018867.1|CA018867 HV09O06r HV Hordeum vulgare subsp. vulgare cDNA clone HV09O06
5-PRIME, mRNA sequence
Length = 649
Score = 674 bits (340), Expect = 0.0
Identities = 487/536 (90%)
Strand = Plus / Minus
Query: 1078 tcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaac 1137
|||||||||||||||||||| |||||||| ||||||||||||||||| ||||| | || |
Sbjct: 645 tcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgacagc 586
Query: 1138 tgatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcagg 1197
||||||||||| ||||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 585 tgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggtaaga 526
Query: 1198 atagtgtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgctgtaa 1257
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 525 atagtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgctgtag 466
Query: 1258 gatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagcca 1317
| |||||| ||||| |||||||||||||| |||||||| || ||||| |||||||| |||
Sbjct: 465 ggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaacca 406
Query: 1318 ccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcc 1377
|| |||||||||||||||||||| |||||||| | |||||||||||| || ||||| |||
Sbjct: 405 ccaccgcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtcc 346
Query: 1378 ttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggtt 1437
|||||||||||||||||||| || || || ||||| ||||||||||| ||||| ||||||
Sbjct: 345 ttgttgctgaactcagggtactccgccgagatggcgtagaacctgtagtcctcagaggtt 286
Query: 1438 tgaatacctttgtcctcggcatctccattccattttcccgaagtgtggttccattcacca 1497
|| |||||||||||||| |||||||||| ||||||||| || ||||||||||||||||||
Sbjct: 285 tggatacctttgtcctcagcatctccatgccattttccagatgtgtggttccattcacca 226
Query: 1498 gccatgttctcatccttcttccactcggacttgacccaccgactttcccagccatcttcg 1557
||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 225 gccatgttctcgtccttcttccactcagacttgacccaccggctttcccagccatcttcg 166
Query: 1558 aacttctcctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcgag 1613
|||||||||||||||||||| || | |||||||||||||| ||||||||||||||
Sbjct: 165 aacttctcctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcgag 110
>gb|BU981018.1|BU981018 HA22G09r HA Hordeum vulgare subsp. vulgare cDNA clone HA22G09
5-PRIME, mRNA sequence
Length = 639
Score = 672 bits (339), Expect = 0.0
Identities = 486/535 (90%)
Strand = Plus / Minus
Query: 1079 caatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaact 1138
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| | || ||
Sbjct: 639 caatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgacagct 580
Query: 1139 gatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcagga 1198
|||||||||| ||||||||||||||||||||||| ||||||||||| | |||||| || |
Sbjct: 579 gatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggtaagaa 520
Query: 1199 tagtgtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgctgtaag 1258
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 519 tagtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgctgtagg 460
Query: 1259 atgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccac 1318
|||||| ||||| |||||||||||||| |||||||| || ||||| |||||||| ||||
Sbjct: 459 gtgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaaccac 400
Query: 1319 cgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcct 1378
| |||||||||||||||||||| |||||||| | |||||||||||| || ||||| ||||
Sbjct: 399 caccgcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtcct 340
Query: 1379 tgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggttt 1438
||||||||||||||||||| || || || ||||| ||||||||||| ||||| |||||||
Sbjct: 339 tgttgctgaactcagggtactccgccgagatggcgtagaacctgtagtcctcagaggttt 280
Query: 1439 gaatacctttgtcctcggcatctccattccattttcccgaagtgtggttccattcaccag 1498
| |||||||||||||| |||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 279 ggatacctttgtcctcagcatctccatgccattttccagatgtgtggttccattcaccag 220
Query: 1499 ccatgttctcatccttcttccactcggacttgacccaccgactttcccagccatcttcga 1558
|||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 219 ccatgttctcgtccttcttccactcagacttgacccaccggctttcccagccatcttcga 160
Query: 1559 acttctcctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcgag 1613
||||||||||||||||||| || | |||||||||||||| ||||||||||||||
Sbjct: 159 acttctcctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcgag 105
>gb|AV916575.1|AV916575 AV916575 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17n02 5', mRNA sequence
Length = 583
Score = 664 bits (335), Expect = 0.0
Identities = 513/571 (89%), Gaps = 1/571 (0%)
Strand = Plus / Minus
Query: 526 gcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttg 585
|||||||| ||||||||||| || || ||||| |||||||||||||| || || ||||||
Sbjct: 581 gcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttg 522
Query: 586 tgcttgccccaggtctcctctgcaaaagtcttggccaaggcagggtcatcagtgatgatg 645
|||||| |||||||||| || ||||| ||||||||||| |||| || ||||||||||
Sbjct: 521 tgcttggcccaggtctcttcggcaaatgtcttggccaaagcagcatcgtcagtgatgaga 462
Query: 646 atgttgtcaaacagagtgcccgatttaacctgccacagctcaatgccaatgtacttcaag 705
||||||||||||| || || || ||||||||||||||||| || ||||||||||||| |
Sbjct: 461 atgttgtcaaacaacgttcctgacttaacctgccacagctcgattccaatgtacttcagg 402
Query: 706 ctgtcgaaggcgtaaatgtatggatcatccttaaaatctgggttgtcaatcataggtgcc 765
||||| || ||||| ||||| |||||||||| || ||||||||| ||||||||||||||
Sbjct: 401 ctgtcaaaagcgtagatgtaaggatcatcctggaagtctgggttggcaatcataggtgcc 342
Query: 766 ttccatttaccctggtagttcgggttcttgattttcttttgtttccatggtcccttgtat 825
|||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||
Sbjct: 341 ttccatttgccctggtagttagggttcttgattttcttttgcttccatgggcccttgtac 282
Query: 826 tctgggttgggaatggtaggggcagtccattcaccatcttcctcatcgtcccagtcctca 885
||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 281 tctgggttggggatggttggggcagtccattcaccatcttcctcatcatcccaatcctca 222
Query: 886 ggcttcttagcatcagggtcaggaatttccttgggaatatcatcatagccctctggcttc 945
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 221 ggcttcttagcatcagggtcagtgacttccttgggaatatcatcatagccctctggcttg 162
Query: 946 ttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggcttcttagcctct 1005
||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 161 acgtcctcaggatcaggaatgtactccttgtcatcccagtcctctggcttcttagcttct 102
Query: 1006 gggtccttgattttcttagggggaagaatatcccagtgctcgtagatgctgccagtttgc 1065
||||||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 101 gggtccttgatttccttgggaggaagaatatcccagtgctcgtagatgcttccagtttgc 42
Query: 1066 tt-ctcttcattatcaatgagaatgctgtat 1095
|| ||||||||| ||||||||||||||||||
Sbjct: 41 ttactcttcattgtcaatgagaatgctgtat 11
>gb|CA029597.1|CA029597 HZ65K18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65K18
5-PRIME, mRNA sequence
Length = 652
Score = 664 bits (335), Expect = 0.0
Identities = 482/531 (90%)
Strand = Plus / Minus
Query: 1083 gagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaactgatc 1142
||||||||||||||| |||||||| ||||||||||||||||| ||||| | || ||||||
Sbjct: 652 gagaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgacagctgatc 593
Query: 1143 agtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcaggatagt 1202
|||||| ||||||||||||||||||||||| ||||||||||| | |||||| || |||||
Sbjct: 592 agtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggtaagaatagt 533
Query: 1203 gtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgctgtaagatgt 1262
||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||
Sbjct: 532 gtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgctgtagggtgt 473
Query: 1263 gtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgcc 1322
||| ||||| |||||||||||||| |||||||| || ||||| |||||||| ||||| ||
Sbjct: 472 gtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaaccaccacc 413
Query: 1323 gcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgtt 1382
|||||||||||||||||| |||||||| | |||||||||||| || ||||| ||||||||
Sbjct: 412 gcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtccttgtt 353
Query: 1383 gctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggtttgaat 1442
||||||||||||||| || || || ||||| ||||||||||| ||||| |||||||| ||
Sbjct: 352 gctgaactcagggtactccgccgagatggcgtagaacctgtagtcctcagaggtttggat 293
Query: 1443 acctttgtcctcggcatctccattccattttcccgaagtgtggttccattcaccagccat 1502
|||||||||||| |||||||||| ||||||||| || |||||||||||||||||||||||
Sbjct: 292 acctttgtcctcagcatctccatgccattttccagatgtgtggttccattcaccagccat 233
Query: 1503 gttctcatccttcttccactcggacttgacccaccgactttcccagccatcttcgaactt 1562
|||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 232 gttctcgtccttcttccactcagacttgacccaccggctttcccagccatcttcgaactt 173
Query: 1563 ctcctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcgag 1613
||||||||||||||| || | |||||||||||||| ||||||||||||||
Sbjct: 172 ctcctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcgag 122
>gb|CB882333.1|CB882333 HL01J03w HL Hordeum vulgare subsp. vulgare cDNA clone HL01J03
3-PRIME, mRNA sequence
Length = 619
Score = 664 bits (335), Expect = 0.0
Identities = 485/535 (90%)
Strand = Plus / Minus
Query: 1079 caatgagaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaact 1138
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| | || ||
Sbjct: 619 caatgagaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgacagct 560
Query: 1139 gatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcagga 1198
|||||||||| |||||||||||||||||||||| ||||||||||| | |||||| || |
Sbjct: 559 gatcagtctcgcaaggcacatccttcttgatcagatggttcttgccgttcttggtaagaa 500
Query: 1199 tagtgtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgctgtaag 1258
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 499 tagtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgctgtagg 440
Query: 1259 atgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccac 1318
|||||| ||||| |||||||||||||| |||||||| || ||||| |||||||| ||||
Sbjct: 439 gtgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaaccac 380
Query: 1319 cgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcct 1378
| |||||||||||||||||||| |||||||| | |||||||||||| || ||||| ||||
Sbjct: 379 caccgcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtcct 320
Query: 1379 tgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggttt 1438
||||||||||||||||||| || || || ||||| ||||||||||| ||||| |||||||
Sbjct: 319 tgttgctgaactcagggtactccgccgagatggcgtagaacctgtagtcctcagaggttt 260
Query: 1439 gaatacctttgtcctcggcatctccattccattttcccgaagtgtggttccattcaccag 1498
| |||||||||||||| |||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 259 ggatacctttgtcctcagcatctccatgccattttccagatgtgtggttccattcaccag 200
Query: 1499 ccatgttctcatccttcttccactcggacttgacccaccgactttcccagccatcttcga 1558
|||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 199 ccatgttctcgtccttcttccactcagacttgacccaccggctttcccagccatcttcga 140
Query: 1559 acttctcctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcgag 1613
||||||||||||||||||| || | |||||||||||||| ||||||||||||||
Sbjct: 139 acttctcctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcgag 85
>gb|BM098251.2|BM098251 EBpi03_SQ002_P14_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_P14 5', mRNA sequence
Length = 623
Score = 652 bits (329), Expect = 0.0
Identities = 479/529 (90%)
Strand = Plus / Minus
Query: 1085 gaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaactgatcag 1144
||||||||||||| |||||||| ||||||||||||||||| ||||| | || ||||||||
Sbjct: 623 gaatgctgtatgtagcatcagggcggatgatcaaagtgtacacatgcgacagctgatcag 564
Query: 1145 tctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcaggatagtgt 1204
|||| ||||||||||| ||||||||||| ||||||||||| | |||||| || |||||||
Sbjct: 563 tctcgcaaggcacatctttcttgatcaaatggttcttgccgttcttggtaagaatagtgt 504
Query: 1205 gaaccttcttggtgctgtacccacagatatctggtccaaacataatgctgtaagatgtgt 1264
||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||
Sbjct: 503 gaaccttcttggtgctgtacccacagatatcgggtccaaacataatgctgtagggtgtgt 444
Query: 1265 ctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgc 1324
| ||||| |||||||||||||| |||||||| || ||||| |||||||| ||||| ||||
Sbjct: 443 cgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaaccaccaccgc 384
Query: 1325 agtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgc 1384
|||||||||||||||| |||||||| | |||||||||||| || ||||| ||||||||||
Sbjct: 383 agtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgc 324
Query: 1385 tgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggtttgaatac 1444
||||||||||||| || || || ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 323 tgaactcagggtactccgccgagatggcgtagaacctgtagtcctcagaggtttggatac 264
Query: 1445 ctttgtcctcggcatctccattccattttcccgaagtgtggttccattcaccagccatgt 1504
|||||||||| |||||||||| ||||||||| || |||||||||||||||||||||||||
Sbjct: 263 ctttgtcctcagcatctccatgccattttccagatgtgtggttccattcaccagccatgt 204
Query: 1505 tctcatccttcttccactcggacttgacccaccgactttcccagccatcttcgaacttct 1564
|||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 203 tctcgtccttcttccactcagacttgacccaccggctttcccagccatcttcgaacttct 144
Query: 1565 cctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcgag 1613
||||||||||||| || | |||||||||||||| ||||||||||||||
Sbjct: 143 cctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcgag 95
>gb|BJ549269.1|BJ549269 BJ549269 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32e06 5', mRNA sequence
Length = 544
Score = 650 bits (328), Expect = 0.0
Identities = 481/531 (90%), Gaps = 1/531 (0%)
Strand = Plus / Minus
Query: 634 tcagtgatgatgatgttgtcaaacagagtgcccgatttaacctgccacagctcaatgcca 693
|||||||||| ||||||||||||| || || || ||||||||||||||||| || |||
Sbjct: 530 tcagtgatgagaatgttgtcaaacaacgttcctgacttaacctgccacagctcgattcca 471
Query: 694 atgtacttcaagctgtcgaaggcgtaaatgtatggatcatccttaaaatctgggttgtca 753
|||||||||| |||||| || ||||| ||||| |||||||||| || ||||||||| ||
Sbjct: 470 atgtacttcaggctgtcaaaagcgtagatgtaaggatcatcctggaagtctgggttggca 411
Query: 754 atcataggtgccttccatttaccctggtagttcgggttcttgattttcttttgtttccat 813
|||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct: 410 atcataggtgccttccatttgccctggtagttagggttcttgattttcttttgcttccat 351
Query: 814 ggtcccttgtattctgggttgggaatggtaggggcagtccattcaccatcttcctcatcg 873
|| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 350 gggcccttgtactctgggttggggatggttggggcagtccattcaccatcttcctcatca 291
Query: 874 tcccagtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatcatag 933
||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 290 tcccaatcctcaggcttcttagcatcagggtcagtgacttccttgggaatatcatcatag 231
Query: 934 ccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggc 993
||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 230 ccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctctggc 171
Query: 994 ttcttagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatg 1053
|||||||| |||||||||||||||| ||| || |||||||||||||||||||||||||||
Sbjct: 170 ttcttagcttctgggtccttgatttccttgggaggaagaatatcccagtgctcgtagatg 111
Query: 1054 ctgccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatg 1113
|| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 110 cttccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcgga-n 52
Query: 1114 atcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttc 1164
||||||||||| ||||| | || |||||||||||| |||||||||||||||
Sbjct: 51 atcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttc 1
>gb|AV913783.1|AV913783 AV913783 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23e12 5', mRNA sequence
Length = 666
Score = 640 bits (323), Expect = 0.0
Identities = 579/664 (87%), Gaps = 3/664 (0%)
Strand = Plus / Minus
Query: 392 tctagagctcgtcgtgcttctcatcatcagaatccttgctatcctcggcatcagagtcgg 451
|||||||||| ||||||||||||||||||||||||||| |||||| |||||||| | |
Sbjct: 666 tctagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagacccag 607
Query: 452 ccttgtcctcgtctgccttctcatcgtcttcctcatcctctaggtcatcatcctcatcat 511
||||||| || | ||| || ||| | |||||||| || | ||||||||| || |||
Sbjct: 606 ccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctca- 548
Query: 512 ccccacccttggcggcatcctcttcttccttctttttctcggcctcatcaaaagcagcct 571
|| |||||| |||||||| ||||||||||| || || ||||| |||||||||||||
Sbjct: 547 --ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagcct 490
Query: 572 tttctgcctccttgtgcttgccccaggtctcctctgcaaaagtcttggccaaggcagggt 631
| || || |||||||||||| |||||||||| || ||||| ||||||||||| |||| |
Sbjct: 489 tctcagcatccttgtgcttggcccaggtctcttcggcaaatgtcttggccaaagcagcat 430
Query: 632 catcagtgatgatgatgttgtcaaacagagtgcccgatttaacctgccacagctcaatgc 691
| |||||||||| ||||||||||||| || || || ||||||||||||||||| || |
Sbjct: 429 cgtcagtgatgagaatgttgtcaaacaacgttcctgacttaacctgccacagctcgattc 370
Query: 692 caatgtacttcaagctgtcgaaggcgtaaatgtatggatcatccttaaaatctgggttgt 751
|||||||||||| |||||| || ||||| ||||| |||||||||| || |||||||||
Sbjct: 369 caatgtacttcaggctgtcaaaagcgtagatgtaaggatcatcctggaagtctgggttgg 310
Query: 752 caatcataggtgccttccatttaccctggtagttcgggttcttgattttcttttgtttcc 811
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 309 caatcataggtgccttccatttgccctggtagttagggttcttgattttcttttgcttcc 250
Query: 812 atggtcccttgtattctgggttgggaatggtaggggcagtccattcaccatcttcctcat 871
|||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 249 atgggcccttgtactctgggttggggatggttggggcagtccattcaccatcttcctcat 190
Query: 872 cgtcccagtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatcat 931
| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 189 catcccaatcctcaggcttcttagcatcagggtcagtgacttccttgggaatatcatcat 130
Query: 932 agccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcag 991
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 129 agccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctctg 70
Query: 992 gcttcttagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgtaga 1051
|||||||||| |||||||||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 69 gcttcttagcttctgggtcctngatttccttgggaggaagaatatcccagtgctcgtaga 10
Query: 1052 tgct 1055
||||
Sbjct: 9 tgct 6
>gb|BJ549338.1|BJ549338 BJ549338 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30o22 5', mRNA sequence
Length = 695
Score = 636 bits (321), Expect = 0.0
Identities = 582/667 (87%), Gaps = 4/667 (0%)
Strand = Plus / Minus
Query: 390 catctagagctcgtcgtgcttctcatcatcagaatccttgctatcctcggcatcagagtc 449
|||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 676 catctagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagaccc 617
Query: 450 ggccttgtcctcgtctgccttctcatcgtcttcctcatcctctaggtcatcatcctcatc 509
|||||||| || | ||| || ||| | |||||||| || | ||||||||| || ||
Sbjct: 616 agccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctc 557
Query: 510 atccccacccttggcggcatcctcttcttccttctttttctcggcctcatcaaaagcagc 569
| || |||||| |||||||| ||||||||||| || || ||||| |||||||||||
Sbjct: 556 a---ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagc 500
Query: 570 cttttctgcctccttgtgcttgccccaggtctcctctgcaaaagtcttggccaaggcagg 629
||| || || |||||||||||| |||||||||| || ||||| ||||||||||| ||||
Sbjct: 499 cttctcagcatccttgtgcttggcccaggtctcttcggcaaatgtcttggccaaagcagc 440
Query: 630 gtcatcagtgatgatgatgttgtcaaacagagtgcccgatttaacctgccacagctcaat 689
|| |||||||||| ||||||||||||| || || || ||||||||||||||||| ||
Sbjct: 439 atcgtcagtgatgagaatgttgtcaaacaacgttcctgacttaacctgccacagctcgat 380
Query: 690 gccaatgtacttcaagctgtcgaaggcgtaaatgtatggatcatccttaaaatctgggtt 749
||||||||||||| |||||| || ||||| ||||| |||||||||| || ||||||||
Sbjct: 379 tccaatgtacttcaggctgtcaaaagcgtagatgtaaggatcatcctggaagtctgggtt 320
Query: 750 gtcaatcataggtgccttccatttaccctggtagttcgggttcttgattttcttttgttt 809
| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 319 ggcaatcataggtgccttccatttgccctggtagttagggttcttgattttcttttgctt 260
Query: 810 ccatggtcccttgtattctgggttgggaatggtaggggcagtccattcaccatcttcctc 869
|||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 259 ccatgggcccttgtactctgggttggggatggttggggcagtccattcaccatcttcctc 200
Query: 870 atcgtcccagtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatc 929
||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 199 atcatcccaatcctcaggcttcttagcatcagggtcagtgacttccttgggaatatcatc 140
Query: 930 atagccctctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctc 989
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 139 atagccctctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctc 80
Query: 990 aggcttcttagcctctgggtccttgattttcttagggggaagaatatcccagtg-ctcgt 1048
||||||||||| |||||||||||||||| ||| || ||||||||||||||||| |||||
Sbjct: 79 tggcttcttagcttctgggtccttgatttccttgggaggaagaatatcccagtgnctcgt 20
Query: 1049 agatgct 1055
|||||||
Sbjct: 19 agatgct 13
>gb|CA017920.1|CA017920 HV06M18r HV Hordeum vulgare subsp. vulgare cDNA clone HV06M18
5-PRIME, mRNA sequence
Length = 500
Score = 634 bits (320), Expect = e-180
Identities = 443/484 (91%)
Strand = Plus / Minus
Query: 914 ccttgggaatatcatcatagccctctggcttcttgtcctcagggtcaggaatgtactcct 973
||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 500 ccttggggatatcatcatagccctctggcttgacgtcctcaggatcaggaatgtactcct 441
Query: 974 tgtcatcccagtcctcaggcttcttagcctctgggtccttgattttcttagggggaagaa 1033
|||||||||||||||| ||||||||||| |||||||||||||||| ||| || |||||||
Sbjct: 440 tgtcatcccagtcctctggcttcttagcttctgggtccttgatttccttgggaggaagaa 381
Query: 1034 tatcccagtgctcgtagatgctgccagtttgcttctcttcattatcaatgagaatgctgt 1093
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 380 tatcccagtgctcgtagatgcttccagtttgcttctcttcattgtcaatgagaatgctgt 321
Query: 1094 atgttgcatcaggacggatgatcaaagtgtaaacatgagtcaactgatcagtctcacaag 1153
|||| |||||||| ||||||||||||||||| ||||| | || |||||||||||| ||||
Sbjct: 320 atgtagcatcagggcggatgatcaaagtgtacacatgcgacagctgatcagtctcgcaag 261
Query: 1154 gcacatccttcttgatcaagtggttcttgccatccttggtcaggatagtgtgaaccttct 1213
||||||||||||||||||| ||||||||||| | |||||| || ||||||||||||||||
Sbjct: 260 gcacatccttcttgatcaaatggttcttgccgttcttggtaagaatagtgtgaaccttct 201
Query: 1214 tggtgctgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaa 1273
|||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||| |
Sbjct: 200 tggtgctgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccga 141
Query: 1274 atttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagct 1333
||||||||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||
Sbjct: 140 atttcttctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagct 81
Query: 1334 tctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcag 1393
||||||| |||||||| | |||||||||||| || ||||| |||||||||||||||||||
Sbjct: 80 tctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcag 21
Query: 1394 ggta 1397
||||
Sbjct: 20 ggta 17
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 874 tcccagtcctcaggcttcttagcatcagggtcaggaatttccttggga 921
||||||||||| ||||||||||| || ||||| ||||||||||||
Sbjct: 435 tcccagtcctctggcttcttagcttctgggtccttgatttccttggga 388
>gb|BJ549141.1|BJ549141 BJ549141 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24b16 5', mRNA sequence
Length = 519
Score = 632 bits (319), Expect = e-180
Identities = 469/519 (90%)
Strand = Plus / Minus
Query: 997 ttagcctctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatgctg 1056
||||| |||||||||||||||| ||| || |||||||||||||||||||||||||||||
Sbjct: 519 ttagcttctgggtccttgatttccttgggaggaagaatatcccagtgctcgtagatgctt 460
Query: 1057 ccagtttgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatgatc 1116
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 459 ccagtttgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatgatc 400
Query: 1117 aaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttcttgatcaagtgg 1176
|||||||| ||||| | || |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 399 aaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaatgg 340
Query: 1177 ttcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtacccacagatatct 1236
|||||||| | |||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccacagatatcg 280
Query: 1237 ggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtctacatcacca 1296
|||||||||||||||| ||| | |||||| ||||| |||||||||||||| ||||||||
Sbjct: 279 ggtccaaacataatgccgtagggtgtgtcgccaccgaatttcttctggtcaacatcacct 220
Query: 1297 cccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaac 1356
|| ||||| |||||||| ||||| ||||| |||||||||||||| |||||||| | ||||
Sbjct: 219 ccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatgcttcaccgtgaac 160
Query: 1357 tgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaatggcatag 1416
|||||||| || ||||| ||||||||||||||||||||||| || || || ||||| |||
Sbjct: 159 tgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgcagagatggcgtag 100
Query: 1417 aacctgtaatcctcggaggtttgaatacctttgtcctcggcatctccattccattttccc 1476
|||||||| ||||| |||||||| |||||||||||||| |||||||||| |||||||||
Sbjct: 99 aacctgtagtcctcagaggtttggatacctttgtcctcagcatctccatgccattttcca 40
Query: 1477 gaagtgtggttccattcaccagccatgttctcatccttc 1515
|| ||||||||||||||||||||||||||||| ||||||
Sbjct: 39 gatgtgtggttccattcaccagccatgttctcgtccttc 1
>gb|AV913228.1|AV913228 AV913228 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21f12 5', mRNA sequence
Length = 545
Score = 630 bits (318), Expect = e-179
Identities = 472/522 (90%), Gaps = 1/522 (0%)
Strand = Plus / Minus
Query: 1003 tctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatgctgccagtt 1062
|||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 543 tctgggtccttgatttccttgggaggaagaatatcccagtgctcgtagatgcttccagtt 484
Query: 1063 tgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtg 1122
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 483 tgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtg 424
Query: 1123 taaacatgagtcaactgatcagtctcacaaggcacatccttcttgatcaagtggttcttg 1182
|| ||||| | || |||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 423 tacacatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttg 364
Query: 1183 ccatccttggtcaggatagtgtgaaccttcttggtgctgtacccacagatatctggtcca 1242
|| | |||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 363 ccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccacagatatcgggtcca 304
Query: 1243 aacataatgctgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagc 1302
|||||||||| ||| | |||||| ||||| |||||||||||||| |||||||| || |||
Sbjct: 303 aacataatgccgtagggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagc 244
Query: 1303 aatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagc 1362
|| |||||||| ||||| ||||| |||||||||||||| |||||||| | ||||||||||
Sbjct: 243 aacttgacgtaaccaccaccgcaatcaagcttctgctcatgcttcaccgtgaactgcagc 184
Query: 1363 accagggtcttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctg 1422
|| || ||||| ||||||||||||||||||||||| || || || ||||| |||||||||
Sbjct: 183 acgagtgtcttgtccttgttgctgaactcagggtactccgcagagatggcgtagaacctg 124
Query: 1423 taatcctcggaggtttgaatacctttgtcctcggcatctccattccattttcccgaagtg 1482
|| ||||| |||||||| |||||||||||||| |||||||||| ||||||||| || |||
Sbjct: 123 tagtcctcagaggtttggatacctttgtcctcagcatctccatgccattttccagatgtg 64
Query: 1483 tggttccattcaccagccatgtt-ctcatccttcttccactc 1523
||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 63 tggttccattcaccagccatgttnctcgtccttcttccactc 22
>gb|BF621650.2|BF621650 HVSMEa0011L18f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0011L18f, mRNA sequence
Length = 839
Score = 624 bits (315), Expect = e-177
Identities = 525/591 (88%), Gaps = 3/591 (0%)
Strand = Plus / Minus
Query: 1026 gggaagaatatcccagtgc-tcgtagatgctgcc-agtttgcttctcttcattatcaatg 1083
||||| ||||| ||||||| ||||||| ||| || ||||||| |||||||| ||||||
Sbjct: 691 gggaaaaatattccagtgcctcgtagaagcttcccagtttgccactcttcatagtcaatg 632
Query: 1084 agaatgctgtatgttgcatcaggacggatgatcaaagtgtaaacatgagtcaactgatca 1143
||||||||||||| |||||||| |||| |||||||||||| ||||| |||| |||||||
Sbjct: 631 agaatgctgtatgaggcatcagggcggaggatcaaagtgtacacatgcgtcagctgatca 572
Query: 1144 gtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcagga-tagt 1202
||||| ||||||||||| ||||||||| | ||||||||||| | |||||| || | ||||
Sbjct: 571 gtctcgcaaggcacatcattcttgatcgaatggttcttgccgttcttggtaagaaatagt 512
Query: 1203 gtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgctgtaagatgt 1262
|||||||||||||||||||| |||||||||||| |||||||||||||||| ||| | |||
Sbjct: 511 gtgaaccttcttggtgctgtccccacagatatcgggtccaaacataatgccgtagggtgt 452
Query: 1263 gtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgcc 1322
||| ||||| |||||||||||||| |||||||| || ||||| |||||||| ||||| ||
Sbjct: 451 gtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaaccaccacc 392
Query: 1323 gcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgtt 1382
||| |||||||||||||| |||||||| | |||||||||||| || ||||| ||||||||
Sbjct: 391 gcaatcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtccttgtt 332
Query: 1383 gctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggtttgaat 1442
||||||||||||||| || || || ||||| ||||||||||| ||||| |||||||| ||
Sbjct: 331 gctgaactcagggtactccgcagagatggcgtagaacctgtagtcctcagaggtttggat 272
Query: 1443 acctttgtcctcggcatctccattccattttcccgaagtgtggttccattcaccagccat 1502
|||||||||||| |||||||||| ||||||||| || |||||||||||||||||||||||
Sbjct: 271 acctttgtcctcagcatctccatgccattttccagatgtgtggttccattcaccagccat 212
Query: 1503 gttctcatccttcttccactcggacttgacccaccgactttcccagccatcttcgaactt 1562
|||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 211 gttctcgtccttcttccactcagacttgacccaccggctttcccagccatcttcgaactt 152
Query: 1563 ctcctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcgag 1613
||||||||||||||| || | |||||||||||||| ||||||||||||||
Sbjct: 151 ctcctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcgag 101
>gb|BJ549420.1|BJ549420 BJ549420 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34a08 5', mRNA sequence
Length = 519
Score = 617 bits (311), Expect = e-175
Identities = 455/503 (90%)
Strand = Plus / Minus
Query: 1003 tctgggtccttgattttcttagggggaagaatatcccagtgctcgtagatgctgccagtt 1062
|||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 518 tctgggtccttgatttccttgggaggaagaatatcccagtgctcgtagatgcttccagtt 459
Query: 1063 tgcttctcttcattatcaatgagaatgctgtatgttgcatcaggacggatgatcaaagtg 1122
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 458 tgcttctcttcattgtcaatgagaatgctgtatgtagcatcagggcggatgatcaaagtg 399
Query: 1123 taaacatgagtcaactgatcagtctcacaaggcacatccttcttgatcaagtggttcttg 1182
|| ||||| | || |||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 398 tacacatgcgacagctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttg 339
Query: 1183 ccatccttggtcaggatagtgtgaaccttcttggtgctgtacccacagatatctggtcca 1242
|| | |||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 338 ccgttcttggtaagaatagtgtgaaccttcttggtgctgtacccacagatatcgggtcca 279
Query: 1243 aacataatgctgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagc 1302
|||||||||| ||| | |||||| ||||| |||||||||||||| |||||||| || |||
Sbjct: 278 aacataatgccgtagggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagc 219
Query: 1303 aatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagc 1362
|| |||||||| ||||| ||||| |||||||||||||| |||||||| | ||||||||||
Sbjct: 218 aacttgacgtaaccaccaccgcaatcaagcttctgctcatgcttcaccgtgaactgcagc 159
Query: 1363 accagggtcttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctg 1422
|| || ||||| ||||||||||||||||||||||| || || || ||||| |||||||||
Sbjct: 158 acgagtgtcttgtccttgttgctgaactcagggtactccgcagagatggcgtagaacctg 99
Query: 1423 taatcctcggaggtttgaatacctttgtcctcggcatctccattccattttcccgaagtg 1482
|| ||||| |||||||| |||||||||||||| |||||||||| ||||||||| || |||
Sbjct: 98 tagtcctcagaggtttggatacctttgtcctcagcatctccatgccattttccagatgtg 39
Query: 1483 tggttccattcaccagccatgtt 1505
|||||||||||||||||||||||
Sbjct: 38 tggttccattcaccagccatgtt 16
>gb|CV064301.1|CV064301 BNEL9D12 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL9D12 5' similar to calreticulin - barley,
mRNA sequence
Length = 609
Score = 615 bits (310), Expect = e-174
Identities = 457/506 (90%)
Strand = Plus / Minus
Query: 1108 cggatgatcaaagtgtaaacatgagtcaactgatcagtctcacaaggcacatccttcttg 1167
||||||||||||||||| ||||| | || |||||||||||| ||||||||||||||||||
Sbjct: 607 cggatgatcaaagtgtacacatgcgacagctgatcagtctcgcaaggcacatccttcttg 548
Query: 1168 atcaagtggttcttgccatccttggtcaggatagtgtgaaccttcttggtgctgtaccca 1227
||||| ||||||||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 547 atcaaatggttcttgccgttcttggtaagaatagtgtgaaccttcttggtgctgtaccca 488
Query: 1228 cagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtct 1287
|||||||| |||||||||||||||| ||| | |||||| ||||| ||||||||||||||
Sbjct: 487 cagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttcttctggtca 428
Query: 1288 acatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttc 1347
|||||||| || ||||| |||||||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 427 acatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatgcttc 368
Query: 1348 acagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaa 1407
|| | |||||||||||| || ||||| ||||||||||||||||||||||| || || ||
Sbjct: 367 accgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgcagag 308
Query: 1408 atggcatagaacctgtaatcctcggaggtttgaatacctttgtcctcggcatctccattc 1467
||||| ||||||||||| ||||| |||||||| |||||||||||||| |||||||||| |
Sbjct: 307 atggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctccatgc 248
Query: 1468 cattttcccgaagtgtggttccattcaccagccatgttctcatccttcttccactcggac 1527
|||||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 247 cattttccagatgtgtggttccattcaccagccatgttctcgtccttcttccactcagac 188
Query: 1528 ttgacccaccgactttcccagccatcttcgaacttctcctggaagaagacctcccctgcg 1587
||||||||||| |||||||||||||||||||||||||||||||||||||| || | |||
Sbjct: 187 ttgacccaccggctttcccagccatcttcgaacttctcctggaagaagacgtcggcggcg 128
Query: 1588 acggcggcgacagaggcgagcgcgag 1613
||||||||||| ||||||||||||||
Sbjct: 127 acggcggcgacggaggcgagcgcgag 102
>gb|BU981405.1|BU981405 HA23I11r HA Hordeum vulgare subsp. vulgare cDNA clone HA23I11
5-PRIME, mRNA sequence
Length = 587
Score = 605 bits (305), Expect = e-171
Identities = 434/477 (90%)
Strand = Plus / Minus
Query: 1137 ctgatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcag 1196
|||||||||||| ||||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 580 ctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggtaag 521
Query: 1197 gatagtgtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgctgta 1256
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 520 aatagtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgctgta 461
Query: 1257 agatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagcc 1316
| |||||| ||||| |||||||||||||| |||||||| || ||||| |||||||| ||
Sbjct: 460 gggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaacc 401
Query: 1317 accgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatc 1376
||| |||||||||||||||||||| |||||||| | |||||||||||| || ||||| ||
Sbjct: 400 accaccgcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtc 341
Query: 1377 cttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggt 1436
||||||||||||||||||||| || || || ||||| ||||||||||| ||||| |||||
Sbjct: 340 cttgttgctgaactcagggtactccgccgagatggcgtagaacctgtagtcctcagaggt 281
Query: 1437 ttgaatacctttgtcctcggcatctccattccattttcccgaagtgtggttccattcacc 1496
||| |||||||||||||| |||||||||| ||||||||| || |||||||||||||||||
Sbjct: 280 ttggatacctttgtcctcagcatctccatgccattttccagatgtgtggttccattcacc 221
Query: 1497 agccatgttctcatccttcttccactcggacttgacccaccgactttcccagccatcttc 1556
|||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 220 agccatgttctcgtccttcttccactcagacttgacccaccggctttcccagccatcttc 161
Query: 1557 gaacttctcctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcgag 1613
||||||||||||||||||||| || | |||||||||||||| ||||||||||||||
Sbjct: 160 gaacttctcctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcgag 104
>gb|CA029698.1|CA029698 HZ65P05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65P05
5-PRIME, mRNA sequence
Length = 597
Score = 605 bits (305), Expect = e-171
Identities = 434/477 (90%)
Strand = Plus / Minus
Query: 1137 ctgatcagtctcacaaggcacatccttcttgatcaagtggttcttgccatccttggtcag 1196
|||||||||||| ||||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 588 ctgatcagtctcgcaaggcacatccttcttgatcaaatggttcttgccgttcttggtaag 529
Query: 1197 gatagtgtgaaccttcttggtgctgtacccacagatatctggtccaaacataatgctgta 1256
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 528 aatagtgtgaaccttcttggtgctgtacccacagatatcgggtccaaacataatgctgta 469
Query: 1257 agatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagcc 1316
| |||||| ||||| |||||||||||||| |||||||| || ||||| |||||||| ||
Sbjct: 468 gggtgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaacc 409
Query: 1317 accgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatc 1376
||| |||||||||||||||||||| |||||||| | |||||||||||| || ||||| ||
Sbjct: 408 accaccgcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtc 349
Query: 1377 cttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggt 1436
||||||||||||||||||||| || || || ||||| ||||||||||| ||||| |||||
Sbjct: 348 cttgttgctgaactcagggtactccgccgagatggcgtagaacctgtagtcctcagaggt 289
Query: 1437 ttgaatacctttgtcctcggcatctccattccattttcccgaagtgtggttccattcacc 1496
||| |||||||||||||| |||||||||| ||||||||| || |||||||||||||||||
Sbjct: 288 ttggatacctttgtcctcagcatctccatgccattttccagatgtgtggttccattcacc 229
Query: 1497 agccatgttctcatccttcttccactcggacttgacccaccgactttcccagccatcttc 1556
|||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 228 agccatgttctcgtccttcttccactcagacttgacccaccggctttcccagccatcttc 169
Query: 1557 gaacttctcctggaagaagacctcccctgcgacggcggcgacagaggcgagcgcgag 1613
||||||||||||||||||||| || | |||||||||||||| ||||||||||||||
Sbjct: 168 gaacttctcctggaagaagacgtcggcggcgacggcggcgacggaggcgagcgcgag 112
>gb|BQ458831.1|BQ458831 HA04B09r HA Hordeum vulgare subsp. vulgare cDNA clone HA04B09
5-PRIME, mRNA sequence
Length = 656
Score = 603 bits (304), Expect = e-171
Identities = 563/649 (86%), Gaps = 3/649 (0%)
Strand = Plus / Minus
Query: 398 gctcgtcgtgcttctcatcatcagaatccttgctatcctcggcatcagagtcggccttgt 457
|||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||
Sbjct: 656 gctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagacccagccttgt 597
Query: 458 cctcgtctgccttctcatcgtcttcctcatcctctaggtcatcatcctcatcatccccac 517
| || | ||| || ||| | |||||||| || | ||||||||| || ||| ||
Sbjct: 596 cgtccttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctca---ccgg 540
Query: 518 ccttggcggcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctg 577
|||||| |||||||| ||||||||||| || || ||||| |||||||||||||| || |
Sbjct: 539 ccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcag 480
Query: 578 cctccttgtgcttgccccaggtctcctctgcaaaagtcttggccaaggcagggtcatcag 637
| |||||||||||| | |||||||| || ||||| ||||||||||| |||| || ||||
Sbjct: 479 catccttgtgcttggcncaggtctcttcggcaaatgtcttggccaaagcagcatcgtcag 420
Query: 638 tgatgatgatgttgtcaaacagagtgcccgatttaacctgccacagctcaatgccaatgt 697
|||||| ||||||||||||| || || || ||||||||||||||||| || |||||||
Sbjct: 419 tgatgagaatgttgtcaaacaacgttcctgacttaacctgccacagctcgattccaatgt 360
Query: 698 acttcaagctgtcgaaggcgtaaatgtatggatcatccttaaaatctgggttgtcaatca 757
|||||| |||||| || ||||| ||||| |||||||||| || ||||||||| ||||||
Sbjct: 359 acttcaggctgtcaaaagcgtagatgtaaggatcatcctggaagtctgggttggcaatca 300
Query: 758 taggtgccttccatttaccctggtagttcgggttcttgattttcttttgtttccatggtc 817
|||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 299 taggtgccttccatttgccctggtagttagggttcttgattttcttttgcttccatgggc 240
Query: 818 ccttgtattctgggttgggaatggtaggggcagtccattcaccatcttcctcatcgtccc 877
||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 239 ccttgtactctgggttggggatggttggggcagtccattcaccatcttcctcatcatccc 180
Query: 878 agtcctcaggcttcttagcatcagggtcaggaatttccttgggaatatcatcatagccct 937
| |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||
Sbjct: 179 aatcctcaggcttcttagcatcagggtcagtgacttccttggggatatcatcatagccct 120
Query: 938 ctggcttcttgtcctcagggtcaggaatgtactccttgtcatcccagtcctcaggcttct 997
||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 119 ctggcttgacgtcctcaggatcaggaatgtactccttgtcatcccagtcctctggcttct 60
Query: 998 tagcctctgggtccttgattttcttagggggaagaatatcccagtgctc 1046
|||| |||||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 59 tagcttctgggtccttgatttccttgggaggaagaatatcccagtgctc 11
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 215,389
Number of Sequences: 312970
Number of extensions: 215389
Number of successful extensions: 65162
Number of sequences better than 0.5: 278
Number of HSP's better than 0.5 without gapping: 262
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 63944
Number of HSP's gapped (non-prelim): 1020
length of query: 1733
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1714
effective length of database: 169,188,109
effective search space: 289988418826
effective search space used: 289988418826
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)