BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8228841.2.1
(621 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN819387.1|CN819387 HRO4405_D06_G11ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN819558.1|CN819558 HRO4401_E11_I21ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN819567.1|CN819567 HRO4401_F08_K15ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN819732.1|CN819732 HRO4403_E02_J03ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN819908.1|CN819908 HRO4407_F10_L19ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN819927.1|CN819927 HRO4407_H12_P23ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820245.1|CN820245 HRO4417_B09_C17ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820268.1|CN820268 HRO4417_D11_G21ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820335.1|CN820335 HRO4418_B12_C24ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820369.1|CN820369 HRO4418_E12_I24ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820401.1|CN820401 HRO4418_H10_O20ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820429.1|CN820429 HRO4419_C05_F09ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820430.1|CN820430 HRO4419_C06_F11ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820452.1|CN820452 HRO4419_E07_J13ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820639.1|CN820639 HRO4415_G02_N03ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820645.1|CN820645 HRO4415_G08_N15ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820938.1|CN820938 HRO4421_F11_K21ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN820994.1|CN820994 HRO4422_C12_E24ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN821151.1|CN821151 HRO4428_A10_B20ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN821286.1|CN821286 HRO4423_F02_L03ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN821292.1|CN821292 HRO4423_F10_L19ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN821319.1|CN821319 HRO4424_A02_B04ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN821357.1|CN821357 HRO4424_D06_H12ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN821463.1|CN821463 HRO4425_F05_K09ZS5 Lib AA069E1X Aven... 64 2e-010
gb|CN821599.1|CN821599 HRO4408_B05_D10ZS5 Lib AA069E1X Aven... 64 2e-010
gb|AF082991.1|AF082991 Avena sativa beta-D-glucosidase beta... 64 2e-010
gb|CN819907.1|CN819907 HRO4407_F09_L17ZS5 Lib AA069E1X Aven... 62 6e-010
gb|CN819479.1|CN819479 HRO4406_E06_I12ZS5 Lib AA069E1X Aven... 56 4e-008
gb|CN819539.1|CN819539 HRO4401_D01_G01ZS5 Lib AA069E1X Aven... 56 4e-008
gb|CN819877.1|CN819877 HRO4407_B11_D21ZS5 Lib AA069E1X Aven... 56 4e-008
gb|CN819879.1|CN819879 HRO4407_C03_F05ZS5 Lib AA069E1X Aven... 56 4e-008
gb|CN819968.1|CN819968 HRO4409_C11_E21ZS5 Lib AA069E1X Aven... 56 4e-008
gb|CN820001.1|CN820001 HRO4409_G10_M19ZS5 Lib AA069E1X Aven... 56 4e-008
gb|CN820036.1|CN820036 HRO4410_D06_G12ZS5 Lib AA069E1X Aven... 56 4e-008
gb|CN820529.1|CN820529 HRO4413_D08_G15ZS5 Lib AA069E1X Aven... 56 4e-008
gb|CN820578.1|CN820578 HRO4415_A09_B17ZS5 Lib AA069E1X Aven... 56 4e-008
gb|CN821121.1|CN821121 HRO4427_G03_N05ZS5 Lib AA069E1X Aven... 56 4e-008
gb|CN821160.1|CN821160 HRO4428_B09_D18ZS5 Lib AA069E1X Aven... 46 4e-005
gb|CN820252.1|CN820252 HRO4417_C06_E11ZS5 Lib AA069E1X Aven... 44 1e-004
emb|X78433.1|ASLBDG A.sativa L. mRNA for beta-D-glucosidase 40 0.002
gb|CN815884.1|CN815884 HRO4511_E10_J19ZS5 Lib AA071E1X Aven... 38 0.009
gb|CN820243.1|CN820243 HRO4417_B07_C13ZS5 Lib AA069E1X Aven... 38 0.009
gb|CN820950.1|CN820950 HRO4421_G11_M21ZS5 Lib AA069E1X Aven... 38 0.009
gb|CN821349.1|CN821349 HRO4424_C10_F20ZS5 Lib AA069E1X Aven... 38 0.009
gb|CN820473.1|CN820473 HRO4419_G06_N11ZS5 Lib AA069E1X Aven... 34 0.14
>gb|CN819387.1|CN819387 HRO4405_D06_G11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4405_D06_G11, mRNA
sequence
Length = 798
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 443 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 502
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 503 acaacttcgagtggtc 518
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 310 aaatatggaaacccaccaatatacatcaccgagaatggaa 349
>gb|CN819558.1|CN819558 HRO4401_E11_I21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_E11_I21, mRNA
sequence
Length = 537
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 28 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 87
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 88 acaacttcgagtggtc 103
>gb|CN819567.1|CN819567 HRO4401_F08_K15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_F08_K15, mRNA
sequence
Length = 869
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 450 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 509
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 510 acaacttcgagtggtc 525
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 317 aaatatggaaacccaccaatatacatcaccgagaatggaa 356
>gb|CN819732.1|CN819732 HRO4403_E02_J03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4403_E02_J03, mRNA
sequence
Length = 598
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 78 tcaaagaagcaatagacttaggtgcggacgtgcggggccacttcacatggagtctaatag 137
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 138 acaacttcgagtggtc 153
>gb|CN819908.1|CN819908 HRO4407_F10_L19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_F10_L19, mRNA
sequence
Length = 633
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 115 tcaaagaagcaatagacttaggtgcggacgtgcggggccacttcacatggagtctaatag 174
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 175 acaacttcgagtggtc 190
>gb|CN819927.1|CN819927 HRO4407_H12_P23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_H12_P23, mRNA
sequence
Length = 832
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 636 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 695
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 696 acaacttcgagtggtc 711
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 503 aaatatggaaacccaccaatatacatcaccgagaatggaa 542
>gb|CN820245.1|CN820245 HRO4417_B09_C17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_B09_C17, mRNA
sequence
Length = 740
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 503 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 444
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 443 acaacttcgagtggtc 428
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 636 aaatatggaaacccaccaatatacatcaccgagaatggaa 597
>gb|CN820268.1|CN820268 HRO4417_D11_G21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_D11_G21, mRNA
sequence
Length = 634
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 126 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 185
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 186 acaacttcgagtggtc 201
>gb|CN820335.1|CN820335 HRO4418_B12_C24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4418_B12_C24, mRNA
sequence
Length = 561
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 44 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 103
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 104 acaacttcgagtggtc 119
>gb|CN820369.1|CN820369 HRO4418_E12_I24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4418_E12_I24, mRNA
sequence
Length = 814
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 507 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 448
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 447 acaacttcgagtggtc 432
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 640 aaatatggaaacccaccaatatacatcaccgagaatggaa 601
>gb|CN820401.1|CN820401 HRO4418_H10_O20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4418_H10_O20, mRNA
sequence
Length = 730
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 227 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 286
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 287 acaacttcgagtggtc 302
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 94 aaatatggaaacccaccaatatacatcaccgagaatggaa 133
>gb|CN820429.1|CN820429 HRO4419_C05_F09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4419_C05_F09, mRNA
sequence
Length = 541
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 11 tcaaagatgcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 70
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 71 acaacttcgagtggtc 86
>gb|CN820430.1|CN820430 HRO4419_C06_F11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4419_C06_F11, mRNA
sequence
Length = 688
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 102 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 161
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 162 acaacttcgagtggtc 177
>gb|CN820452.1|CN820452 HRO4419_E07_J13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4419_E07_J13, mRNA
sequence
Length = 358
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 215 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 274
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 275 acaacttcgagtggtc 290
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 82 aaatatggaaacccaccaatatacatcaccgagaatggaa 121
>gb|CN820639.1|CN820639 HRO4415_G02_N03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_G02_N03, mRNA
sequence
Length = 641
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 123 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 182
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 183 acaacttcgagtggtc 198
>gb|CN820645.1|CN820645 HRO4415_G08_N15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_G08_N15, mRNA
sequence
Length = 646
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 196 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 255
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 256 acaacttcgagtggtc 271
Score = 46.1 bits (23), Expect = 4e-005
Identities = 69/83 (83%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 29 gtaccctaacggtctaaaggatatccttatgttcataaagaacaaatacggaaacccacc 88
|||||| || || |||||||| |||||| || |||| ||| | ||||| |||||||||||
Sbjct: 21 gtacccaaaagggctaaaggacatccttctgctcatgaagga-aaatatggaaacccacc 79
Query: 89 ggtctacatcactgagaatggaa 111
| |||||||| ||||||||||
Sbjct: 80 aatatacatcaccgagaatggaa 102
>gb|CN820938.1|CN820938 HRO4421_F11_K21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_F11_K21, mRNA
sequence
Length = 808
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 511 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 570
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 571 acaacttcgagtggtc 586
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 378 aaatatggaaacccaccaatatacatcaccgagaatggaa 417
>gb|CN820994.1|CN820994 HRO4422_C12_E24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4422_C12_E24, mRNA
sequence
Length = 742
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 324 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 383
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 384 acaacttcgagtggtc 399
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 191 aaatatggaaacccaccaatatacatcaccgagaatggaa 230
>gb|CN821151.1|CN821151 HRO4428_A10_B20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_A10_B20, mRNA
sequence
Length = 826
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 516 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 575
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 576 acaacttcgagtggtc 591
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 383 aaatatggaaacccaccaatatacatcaccgagaatggaa 422
>gb|CN821286.1|CN821286 HRO4423_F02_L03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_F02_L03, mRNA
sequence
Length = 770
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 365 tcaaagaagcaatagacttaggtgcggacgtgcggggccacttcacatggagtctaatag 424
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 425 acaacttcgagtggtc 440
Score = 40.1 bits (20), Expect = 0.002
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 42 ctaaaggatatccttatgttcataaagaacaaatacggaaacccaccggtctacatcact 101
|||||| | |||||| || |||| ||| | ||||| ||||||||||| | ||||||||
Sbjct: 202 ctaaagaacatccttctgctcatgaaggaaaaatatggaaacccaccaatatacatcacc 261
Query: 102 gagaatgg 109
||||||||
Sbjct: 262 gagaatgg 269
>gb|CN821292.1|CN821292 HRO4423_F10_L19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_F10_L19, mRNA
sequence
Length = 779
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 267 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 326
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 327 acaacttcgagtggtc 342
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 134 aaatatggaaacccaccaatatacatcaccgagaatggaa 173
>gb|CN821319.1|CN821319 HRO4424_A02_B04ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_A02_B04, mRNA
sequence
Length = 571
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 48 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 107
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 108 acaacttcgagtggtc 123
>gb|CN821357.1|CN821357 HRO4424_D06_H12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_D06_H12, mRNA
sequence
Length = 548
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 10 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 69
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 70 acaacttcgagtggtc 85
>gb|CN821463.1|CN821463 HRO4425_F05_K09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_F05_K09, mRNA
sequence
Length = 812
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 634 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 693
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 694 acaacttcgagtggtc 709
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 501 aaatatggaaacccaccaatatacatcaccgagaatggaa 540
>gb|CN821599.1|CN821599 HRO4408_B05_D10ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4408_B05_D10, mRNA
sequence
Length = 730
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 322 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 381
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 382 acaacttcgagtggtc 397
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 189 aaatatggaaacccaccaatatacatcaccgagaatggaa 228
>gb|AF082991.1|AF082991 Avena sativa beta-D-glucosidase beta subunit precursor (P60b) mRNA,
complete cds
Length = 1923
Score = 63.9 bits (32), Expect = 2e-010
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 1469 tcaaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 1528
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 1529 acaacttcgagtggtc 1544
Score = 54.0 bits (27), Expect = 2e-007
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 29 gtaccctaacggtctaaaggatatccttatgttcataaagaacaaatacggaaacccacc 88
|||||| || || |||||||| |||||| || |||| ||| | ||||| |||||||||||
Sbjct: 1293 gtacccaaaagggctaaaggacatccttctgctcatgaaggaaaaatatggaaacccacc 1352
Query: 89 ggtctacatcactgagaatggaa 111
| |||||||| ||||||||||
Sbjct: 1353 aatatacatcaccgagaatggaa 1375
>gb|CN819907.1|CN819907 HRO4407_F09_L17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_F09_L17, mRNA
sequence
Length = 467
Score = 61.9 bits (31), Expect = 6e-010
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 209 caaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgga 268
|||||| ||||||||| | || ||||||||||| ||||||||||| ||| ||| | ||
Sbjct: 11 caaagaagcaatagacttaggcgcggacgtgcggggccacttcacatggagtctaataga 70
Query: 269 caacttcgagtggtc 283
|||||||||||||||
Sbjct: 71 caacttcgagtggtc 85
>gb|CN819479.1|CN819479 HRO4406_E06_I12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4406_E06_I12, mRNA
sequence
Length = 637
Score = 56.0 bits (28), Expect = 4e-008
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| || |||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 457 tcaaagaagcgatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 516
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 517 acaacttcgagtggtc 532
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 323 aaatatggaaacccaccaatatacatcaccgagaatggaa 362
>gb|CN819539.1|CN819539 HRO4401_D01_G01ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_D01_G01, mRNA
sequence
Length = 547
Score = 56.0 bits (28), Expect = 4e-008
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| || |||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 11 tcaaagaagcgatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 70
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 71 acaacttcgagtggtc 86
>gb|CN819877.1|CN819877 HRO4407_B11_D21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_B11_D21, mRNA
sequence
Length = 595
Score = 56.0 bits (28), Expect = 4e-008
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| || |||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 48 tcaaagaagcgatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 107
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 108 acaacttcgagtggtc 123
>gb|CN819879.1|CN819879 HRO4407_C03_F05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_C03_F05, mRNA
sequence
Length = 623
Score = 56.0 bits (28), Expect = 4e-008
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| || |||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 97 tcaaagaagcgatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 156
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 157 acaacttcgagtggtc 172
>gb|CN819968.1|CN819968 HRO4409_C11_E21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4409_C11_E21, mRNA
sequence
Length = 723
Score = 56.0 bits (28), Expect = 4e-008
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| || |||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 297 tcaaagaagcgatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 356
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 357 acaacttcgagtggtc 372
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 164 aaatatggaaacccaccaatatacatcaccgagaatggaa 203
>gb|CN820001.1|CN820001 HRO4409_G10_M19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4409_G10_M19, mRNA
sequence
Length = 565
Score = 56.0 bits (28), Expect = 4e-008
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| || |||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 11 tcaaagaagcgatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 70
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 71 acaacttcgagtggtc 86
>gb|CN820036.1|CN820036 HRO4410_D06_G12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4410_D06_G12, mRNA
sequence
Length = 825
Score = 56.0 bits (28), Expect = 4e-008
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| || |||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 313 tcaaagaagcgatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 372
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 373 acaacttcgagtggtc 388
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 180 aaatatggaaacccaccaatatacatcaccgagaatggaa 219
>gb|CN820529.1|CN820529 HRO4413_D08_G15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4413_D08_G15, mRNA
sequence
Length = 710
Score = 56.0 bits (28), Expect = 4e-008
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| || |||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 246 tcaaagaagcgatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 305
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 306 acaacttcgagtggtc 321
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 113 aaatatggaaacccaccaatatacatcaccgagaatggaa 152
>gb|CN820578.1|CN820578 HRO4415_A09_B17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_A09_B17, mRNA
sequence
Length = 700
Score = 56.0 bits (28), Expect = 4e-008
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| || |||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 357 tcaaagaagcgatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 298
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 297 acaacttcgagtggtc 282
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 490 aaatatggaaacccaccaatatacatcaccgagaatggaa 451
>gb|CN821121.1|CN821121 HRO4427_G03_N05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4427_G03_N05, mRNA
sequence
Length = 566
Score = 56.0 bits (28), Expect = 4e-008
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcacctggtctctgctgg 267
||||||| || |||||| | || ||||||||||| ||||||||||| ||| ||| | |
Sbjct: 59 tcaaagaagcgatagacttaggcgcggacgtgcggggccacttcacatggagtctaatag 118
Query: 268 acaacttcgagtggtc 283
||||||||||||||||
Sbjct: 119 acaacttcgagtggtc 134
>gb|CN821160.1|CN821160 HRO4428_B09_D18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_B09_D18, mRNA
sequence
Length = 678
Score = 46.1 bits (23), Expect = 4e-005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 255 tggtctctgctggacaacttcgagtgg 281
|||||||||||||||||||| ||||||
Sbjct: 394 tggtctctgctggacaactttgagtgg 420
>gb|CN820252.1|CN820252 HRO4417_C06_E11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_C06_E11, mRNA
sequence
Length = 544
Score = 44.1 bits (22), Expect = 1e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 208 tcaaagacgcaatagacctgggagcggacgtgcgtggccacttcac 253
||||||| ||||||||| | | ||||||||||| |||||||||||
Sbjct: 488 tcaaagaagcaatagacttaagcgcggacgtgcggggccacttcac 533
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 355 aaatatggaaacccaccaatatacatcaccgagaatggaa 394
>emb|X78433.1|ASLBDG A.sativa L. mRNA for beta-D-glucosidase
Length = 1898
Score = 40.1 bits (20), Expect = 0.002
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 72 aaatacggaaacccaccggtctacatcactgagaatggaa 111
||||| ||||||||||| | |||||||| ||||||||||
Sbjct: 1333 aaatatggaaacccaccaatatacatcaccgagaatggaa 1372
Score = 36.2 bits (18), Expect = 0.036
Identities = 39/46 (84%)
Strand = Plus / Plus
Query: 238 tgcgtggccacttcacctggtctctgctggacaacttcgagtggtc 283
|||| ||||||||||| ||| ||| | |||||||||||||||||
Sbjct: 1499 tgcggggccacttcacatggagtctaatagacaacttcgagtggtc 1544
>gb|CN815884.1|CN815884 HRO4511_E10_J19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_E10_J19, mRNA sequence
Length = 707
Score = 38.2 bits (19), Expect = 0.009
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 255 tggtctctgctggacaacttcgagtgg 281
|||||||| ||||||||||| ||||||
Sbjct: 512 tggtctctcctggacaactttgagtgg 538
>gb|CN820243.1|CN820243 HRO4417_B07_C13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_B07_C13, mRNA
sequence
Length = 335
Score = 38.2 bits (19), Expect = 0.009
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 255 tggtctctgctggacaacttcgagtgg 281
|||||||| ||||||||||| ||||||
Sbjct: 29 tggtctctcctggacaactttgagtgg 55
>gb|CN820950.1|CN820950 HRO4421_G11_M21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_G11_M21, mRNA
sequence
Length = 840
Score = 38.2 bits (19), Expect = 0.009
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 255 tggtctctgctggacaacttcgagtgg 281
|||||||| ||||||||||| ||||||
Sbjct: 597 tggtctctcctggacaactttgagtgg 623
>gb|CN821349.1|CN821349 HRO4424_C10_F20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_C10_F20, mRNA
sequence
Length = 628
Score = 38.2 bits (19), Expect = 0.009
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 255 tggtctctgctggacaacttcgagtgg 281
|||||||| ||||||||||| ||||||
Sbjct: 338 tggtctctcctggacaactttgagtgg 364
>gb|CN820473.1|CN820473 HRO4419_G06_N11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4419_G06_N11, mRNA
sequence
Length = 455
Score = 34.2 bits (17), Expect = 0.14
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 267 gacaacttcgagtggtc 283
|||||||||||||||||
Sbjct: 2 gacaacttcgagtggtc 18
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1611
Number of Sequences: 8143
Number of extensions: 1611
Number of successful extensions: 600
Number of sequences better than 0.5: 45
Number of HSP's better than 0.5 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 460
Number of HSP's gapped (non-prelim): 140
length of query: 621
length of database: 4,702,463
effective HSP length: 16
effective length of query: 605
effective length of database: 4,572,175
effective search space: 2766165875
effective search space used: 2766165875
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)