BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3128444.2.1
(857 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN818518.1|CN818518 HRO4459_F04_K07ZS5 Lib AA070E1X Aven... 74 2e-013
gb|CN820708.1|CN820708 HRO4416_F04_L08ZS5 Lib AA069E1X Aven... 74 2e-013
gb|CN820277.1|CN820277 HRO4417_E10_I19ZS5 Lib AA069E1X Aven... 40 0.003
gb|CN819387.1|CN819387 HRO4405_D06_G11ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN819479.1|CN819479 HRO4406_E06_I12ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN819539.1|CN819539 HRO4401_D01_G01ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN819558.1|CN819558 HRO4401_E11_I21ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN819567.1|CN819567 HRO4401_F08_K15ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN819877.1|CN819877 HRO4407_B11_D21ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN819879.1|CN819879 HRO4407_C03_F05ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN819907.1|CN819907 HRO4407_F09_L17ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN819927.1|CN819927 HRO4407_H12_P23ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN819968.1|CN819968 HRO4409_C11_E21ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820001.1|CN820001 HRO4409_G10_M19ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820036.1|CN820036 HRO4410_D06_G12ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820245.1|CN820245 HRO4417_B09_C17ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820268.1|CN820268 HRO4417_D11_G21ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820335.1|CN820335 HRO4418_B12_C24ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820369.1|CN820369 HRO4418_E12_I24ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820401.1|CN820401 HRO4418_H10_O20ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820429.1|CN820429 HRO4419_C05_F09ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820430.1|CN820430 HRO4419_C06_F11ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820452.1|CN820452 HRO4419_E07_J13ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820529.1|CN820529 HRO4413_D08_G15ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820578.1|CN820578 HRO4415_A09_B17ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820639.1|CN820639 HRO4415_G02_N03ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820645.1|CN820645 HRO4415_G08_N15ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820938.1|CN820938 HRO4421_F11_K21ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN820994.1|CN820994 HRO4422_C12_E24ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN821121.1|CN821121 HRO4427_G03_N05ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN821151.1|CN821151 HRO4428_A10_B20ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN821292.1|CN821292 HRO4423_F10_L19ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN821319.1|CN821319 HRO4424_A02_B04ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN821357.1|CN821357 HRO4424_D06_H12ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN821463.1|CN821463 HRO4425_F05_K09ZS5 Lib AA069E1X Aven... 38 0.013
gb|CN821599.1|CN821599 HRO4408_B05_D10ZS5 Lib AA069E1X Aven... 38 0.013
gb|AF082991.1|AF082991 Avena sativa beta-D-glucosidase beta... 38 0.013
emb|X78433.1|ASLBDG A.sativa L. mRNA for beta-D-glucosidase 38 0.013
>gb|CN818518.1|CN818518 HRO4459_F04_K07ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4459_F04_K07, mRNA sequence
Length = 763
Score = 73.8 bits (37), Expect = 2e-013
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| ||||| | |
Sbjct: 214 gatgttcgtggatactttgcatggtcattcttggataactttgagtgggcgatgggattc 273
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || || ||||| || ||||| ||| | ||||||||| | ||||| ||
Sbjct: 274 accaagaggtttgggattgtctatgttgattataagaatgggctctcccgacaccctaaa 333
Query: 643 gcatc 647
|||||
Sbjct: 334 gcatc 338
Score = 52.0 bits (26), Expect = 8e-007
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 397 gagaatggcatggatgatgaagacgatcaatccgcaac 434
||||||||||||||||||||||| |||| ||| |||||
Sbjct: 88 gagaatggcatggatgatgaagatgatccatcagcaac 125
>gb|CN820708.1|CN820708 HRO4416_F04_L08ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4416_F04_L08, mRNA
sequence
Length = 780
Score = 73.8 bits (37), Expect = 2e-013
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| ||||| | |
Sbjct: 209 gatgttcgtggatactttgcatggtcattcttggataactttgagtgggcgatgggattc 268
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || || ||||| || ||||| ||| | ||||||||| | ||||| ||
Sbjct: 269 accaagaggtttgggattgtctatgttgattataagaatgggctctcccgacaccctaaa 328
Query: 643 gcatc 647
|||||
Sbjct: 329 gcatc 333
Score = 52.0 bits (26), Expect = 8e-007
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 397 gagaatggcatggatgatgaagacgatcaatccgcaac 434
||||||||||||||||||||||| |||| ||| |||||
Sbjct: 83 gagaatggcatggatgatgaagatgatccatcagcaac 120
>gb|CN820277.1|CN820277 HRO4417_E10_I19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_E10_I19, mRNA
sequence
Length = 789
Score = 40.1 bits (20), Expect = 0.003
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 392 ttactgagaatggcatggatgatg 415
||||||||||||| ||||||||||
Sbjct: 260 ttactgagaatggtatggatgatg 283
>gb|CN819387.1|CN819387 HRO4405_D06_G11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4405_D06_G11, mRNA
sequence
Length = 798
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 502 gacaacttcgagtggtctttgggctac 528
>gb|CN819479.1|CN819479 HRO4406_E06_I12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4406_E06_I12, mRNA
sequence
Length = 637
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 516 gacaacttcgagtggtctttgggctac 542
>gb|CN819539.1|CN819539 HRO4401_D01_G01ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_D01_G01, mRNA
sequence
Length = 547
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 70 gacaacttcgagtggtctttgggctac 96
>gb|CN819558.1|CN819558 HRO4401_E11_I21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_E11_I21, mRNA
sequence
Length = 537
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 87 gacaacttcgagtggtctttgggctac 113
>gb|CN819567.1|CN819567 HRO4401_F08_K15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_F08_K15, mRNA
sequence
Length = 869
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 509 gacaacttcgagtggtctttgggctac 535
>gb|CN819877.1|CN819877 HRO4407_B11_D21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_B11_D21, mRNA
sequence
Length = 595
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 107 gacaacttcgagtggtctttgggctac 133
>gb|CN819879.1|CN819879 HRO4407_C03_F05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_C03_F05, mRNA
sequence
Length = 623
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 156 gacaacttcgagtggtctttgggctac 182
>gb|CN819907.1|CN819907 HRO4407_F09_L17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_F09_L17, mRNA
sequence
Length = 467
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 69 gacaacttcgagtggtctttgggctac 95
>gb|CN819927.1|CN819927 HRO4407_H12_P23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_H12_P23, mRNA
sequence
Length = 832
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 695 gacaacttcgagtggtctttgggctac 721
>gb|CN819968.1|CN819968 HRO4409_C11_E21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4409_C11_E21, mRNA
sequence
Length = 723
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 356 gacaacttcgagtggtctttgggctac 382
>gb|CN820001.1|CN820001 HRO4409_G10_M19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4409_G10_M19, mRNA
sequence
Length = 565
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 70 gacaacttcgagtggtctttgggctac 96
>gb|CN820036.1|CN820036 HRO4410_D06_G12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4410_D06_G12, mRNA
sequence
Length = 825
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 372 gacaacttcgagtggtctttgggctac 398
>gb|CN820245.1|CN820245 HRO4417_B09_C17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_B09_C17, mRNA
sequence
Length = 740
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 444 gacaacttcgagtggtctttgggctac 418
>gb|CN820268.1|CN820268 HRO4417_D11_G21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_D11_G21, mRNA
sequence
Length = 634
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 185 gacaacttcgagtggtctttgggctac 211
>gb|CN820335.1|CN820335 HRO4418_B12_C24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4418_B12_C24, mRNA
sequence
Length = 561
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 103 gacaacttcgagtggtctttgggctac 129
>gb|CN820369.1|CN820369 HRO4418_E12_I24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4418_E12_I24, mRNA
sequence
Length = 814
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 448 gacaacttcgagtggtctttgggctac 422
>gb|CN820401.1|CN820401 HRO4418_H10_O20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4418_H10_O20, mRNA
sequence
Length = 730
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 286 gacaacttcgagtggtctttgggctac 312
>gb|CN820429.1|CN820429 HRO4419_C05_F09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4419_C05_F09, mRNA
sequence
Length = 541
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 70 gacaacttcgagtggtctttgggctac 96
>gb|CN820430.1|CN820430 HRO4419_C06_F11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4419_C06_F11, mRNA
sequence
Length = 688
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 161 gacaacttcgagtggtctttgggctac 187
>gb|CN820452.1|CN820452 HRO4419_E07_J13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4419_E07_J13, mRNA
sequence
Length = 358
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 274 gacaacttcgagtggtctttgggctac 300
>gb|CN820529.1|CN820529 HRO4413_D08_G15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4413_D08_G15, mRNA
sequence
Length = 710
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 305 gacaacttcgagtggtctttgggctac 331
>gb|CN820578.1|CN820578 HRO4415_A09_B17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_A09_B17, mRNA
sequence
Length = 700
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 298 gacaacttcgagtggtctttgggctac 272
>gb|CN820639.1|CN820639 HRO4415_G02_N03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_G02_N03, mRNA
sequence
Length = 641
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 182 gacaacttcgagtggtctttgggctac 208
>gb|CN820645.1|CN820645 HRO4415_G08_N15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_G08_N15, mRNA
sequence
Length = 646
Score = 38.2 bits (19), Expect = 0.013
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatggg 578
||||||||||||||| |||||||
Sbjct: 255 gacaacttcgagtggtctatggg 277
>gb|CN820938.1|CN820938 HRO4421_F11_K21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_F11_K21, mRNA
sequence
Length = 808
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 570 gacaacttcgagtggtctttgggctac 596
>gb|CN820994.1|CN820994 HRO4422_C12_E24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4422_C12_E24, mRNA
sequence
Length = 742
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 383 gacaacttcgagtggtctttgggctac 409
>gb|CN821121.1|CN821121 HRO4427_G03_N05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4427_G03_N05, mRNA
sequence
Length = 566
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 118 gacaacttcgagtggtctttgggctac 144
>gb|CN821151.1|CN821151 HRO4428_A10_B20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_A10_B20, mRNA
sequence
Length = 826
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 575 gacaacttcgagtggtctttgggctac 601
>gb|CN821292.1|CN821292 HRO4423_F10_L19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_F10_L19, mRNA
sequence
Length = 779
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 326 gacaacttcgagtggtctttgggctac 352
>gb|CN821319.1|CN821319 HRO4424_A02_B04ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_A02_B04, mRNA
sequence
Length = 571
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 107 gacaacttcgagtggtctttgggctac 133
>gb|CN821357.1|CN821357 HRO4424_D06_H12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_D06_H12, mRNA
sequence
Length = 548
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 69 gacaacttcgagtggtctttgggctac 95
>gb|CN821463.1|CN821463 HRO4425_F05_K09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_F05_K09, mRNA
sequence
Length = 812
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 693 gacaacttcgagtggtctttgggctac 719
>gb|CN821599.1|CN821599 HRO4408_B05_D10ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4408_B05_D10, mRNA
sequence
Length = 730
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 381 gacaacttcgagtggtctttgggctac 407
>gb|AF082991.1|AF082991 Avena sativa beta-D-glucosidase beta subunit precursor (P60b) mRNA,
complete cds
Length = 1923
Score = 38.2 bits (19), Expect = 0.013
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatggg 578
||||||||||||||| |||||||
Sbjct: 1528 gacaacttcgagtggtctatggg 1550
>emb|X78433.1|ASLBDG A.sativa L. mRNA for beta-D-glucosidase
Length = 1898
Score = 38.2 bits (19), Expect = 0.013
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 556 gacaacttcgagtgggctatgggctac 582
||||||||||||||| || ||||||||
Sbjct: 1528 gacaacttcgagtggtctttgggctac 1554
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1846
Number of Sequences: 8143
Number of extensions: 1846
Number of successful extensions: 530
Number of sequences better than 0.5: 38
Number of HSP's better than 0.5 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 486
Number of HSP's gapped (non-prelim): 44
length of query: 857
length of database: 4,702,463
effective HSP length: 16
effective length of query: 841
effective length of database: 4,572,175
effective search space: 3845199175
effective search space used: 3845199175
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)