BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.22
(333 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN821160.1|CN821160 HRO4428_B09_D18ZS5 Lib AA069E1X Aven... 62 3e-010
gb|CN819387.1|CN819387 HRO4405_D06_G11ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN819558.1|CN819558 HRO4401_E11_I21ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN819567.1|CN819567 HRO4401_F08_K15ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN819907.1|CN819907 HRO4407_F09_L17ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN819927.1|CN819927 HRO4407_H12_P23ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820245.1|CN820245 HRO4417_B09_C17ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820268.1|CN820268 HRO4417_D11_G21ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820335.1|CN820335 HRO4418_B12_C24ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820369.1|CN820369 HRO4418_E12_I24ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820401.1|CN820401 HRO4418_H10_O20ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820429.1|CN820429 HRO4419_C05_F09ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820430.1|CN820430 HRO4419_C06_F11ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820473.1|CN820473 HRO4419_G06_N11ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820639.1|CN820639 HRO4415_G02_N03ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820645.1|CN820645 HRO4415_G08_N15ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820938.1|CN820938 HRO4421_F11_K21ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN820994.1|CN820994 HRO4422_C12_E24ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN821292.1|CN821292 HRO4423_F10_L19ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN821319.1|CN821319 HRO4424_A02_B04ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN821357.1|CN821357 HRO4424_D06_H12ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN821463.1|CN821463 HRO4425_F05_K09ZS5 Lib AA069E1X Aven... 58 5e-009
gb|CN821599.1|CN821599 HRO4408_B05_D10ZS5 Lib AA069E1X Aven... 58 5e-009
gb|AF082991.1|AF082991 Avena sativa beta-D-glucosidase beta... 58 5e-009
gb|CN819479.1|CN819479 HRO4406_E06_I12ZS5 Lib AA069E1X Aven... 56 2e-008
gb|CN819539.1|CN819539 HRO4401_D01_G01ZS5 Lib AA069E1X Aven... 56 2e-008
gb|CN819877.1|CN819877 HRO4407_B11_D21ZS5 Lib AA069E1X Aven... 56 2e-008
gb|CN819879.1|CN819879 HRO4407_C03_F05ZS5 Lib AA069E1X Aven... 56 2e-008
gb|CN819968.1|CN819968 HRO4409_C11_E21ZS5 Lib AA069E1X Aven... 56 2e-008
gb|CN820001.1|CN820001 HRO4409_G10_M19ZS5 Lib AA069E1X Aven... 56 2e-008
gb|CN820036.1|CN820036 HRO4410_D06_G12ZS5 Lib AA069E1X Aven... 56 2e-008
gb|CN820529.1|CN820529 HRO4413_D08_G15ZS5 Lib AA069E1X Aven... 56 2e-008
gb|CN820578.1|CN820578 HRO4415_A09_B17ZS5 Lib AA069E1X Aven... 56 2e-008
gb|CN821121.1|CN821121 HRO4427_G03_N05ZS5 Lib AA069E1X Aven... 56 2e-008
gb|CN821580.1|CN821580 HRO4426_H09_O18ZS5 Lib AA069E1X Aven... 56 2e-008
emb|X78433.1|ASLBDG A.sativa L. mRNA for beta-D-glucosidase 56 2e-008
gb|CN821151.1|CN821151 HRO4428_A10_B20ZS5 Lib AA069E1X Aven... 52 3e-007
gb|CN819732.1|CN819732 HRO4403_E02_J03ZS5 Lib AA069E1X Aven... 50 1e-006
gb|CN819704.1|CN819704 HRO4403_B09_D17ZS5 Lib AA069E1X Aven... 48 5e-006
gb|CN815884.1|CN815884 HRO4511_E10_J19ZS5 Lib AA071E1X Aven... 46 2e-005
gb|CN820243.1|CN820243 HRO4417_B07_C13ZS5 Lib AA069E1X Aven... 46 2e-005
gb|CN820950.1|CN820950 HRO4421_G11_M21ZS5 Lib AA069E1X Aven... 46 2e-005
gb|CN821349.1|CN821349 HRO4424_C10_F20ZS5 Lib AA069E1X Aven... 46 2e-005
gb|CN819908.1|CN819908 HRO4407_F10_L19ZS5 Lib AA069E1X Aven... 42 3e-004
gb|CN821286.1|CN821286 HRO4423_F02_L03ZS5 Lib AA069E1X Aven... 42 3e-004
emb|X75777.1|ASTCPP1 A.sativa (Pewi) ASTCP-K19 mRNA for t c... 32 0.29
emb|X75778.1|ASTCPP1A A.sativa (Pewi) ASTCP-K36 mRNA for t ... 32 0.29
gb|CN820997.1|CN820997 HRO4422_D04_G08ZS5 Lib AA069E1X Aven... 30 1.2
gb|CN815731.1|CN815731 HRO4514_H07_O14ZS5 Lib AA071E1X Aven... 28 4.6
gb|CN816449.1|CN816449 HRO4520_H02_P04ZS5 Lib AA071E1X Aven... 28 4.6
gb|CN817536.1|CN817536 HRO4463_H05_O09ZS5 Lib AA070E1X Aven... 28 4.6
gb|CN819392.1|CN819392 HRO4405_E01_I01ZS5 Lib AA069E1X Aven... 28 4.6
gb|CN821629.1|CN821629 HRO4408_D12_H24Z Lib AA069E1X Avena ... 28 4.6
>gb|CN821160.1|CN821160 HRO4428_B09_D18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_B09_D18, mRNA
sequence
Length = 678
Score = 61.9 bits (31), Expect = 3e-010
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactttga 54
|||||||| ||||||||||||||||||||||||||
Sbjct: 382 ggctactttgcttggtctctgctggacaactttga 416
>gb|CN819387.1|CN819387 HRO4405_D06_G11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4405_D06_G11, mRNA
sequence
Length = 798
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 534 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 593
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 594 agccaagtggctgaaagagttcaac 618
>gb|CN819558.1|CN819558 HRO4401_E11_I21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_E11_I21, mRNA
sequence
Length = 537
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 119 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 178
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 179 agccaagtggctgaaagagttcaac 203
>gb|CN819567.1|CN819567 HRO4401_F08_K15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_F08_K15, mRNA
sequence
Length = 869
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 541 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 600
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 601 agccaagtggctgaaagagttcaac 625
>gb|CN819907.1|CN819907 HRO4407_F09_L17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_F09_L17, mRNA
sequence
Length = 467
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 101 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 160
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 161 agccaagtggctgaaagagttcaac 185
>gb|CN819927.1|CN819927 HRO4407_H12_P23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_H12_P23, mRNA
sequence
Length = 832
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 727 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 786
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 787 agccaagtggctgaaagagttcaac 811
>gb|CN820245.1|CN820245 HRO4417_B09_C17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_B09_C17, mRNA
sequence
Length = 740
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 412 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 353
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 352 agccaagtggctgaaagagttcaac 328
>gb|CN820268.1|CN820268 HRO4417_D11_G21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_D11_G21, mRNA
sequence
Length = 634
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 217 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 276
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 277 agccaagtggctgaaagagttcaac 301
>gb|CN820335.1|CN820335 HRO4418_B12_C24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4418_B12_C24, mRNA
sequence
Length = 561
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 135 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 194
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 195 agccaagtggctgaaagagttcaac 219
>gb|CN820369.1|CN820369 HRO4418_E12_I24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4418_E12_I24, mRNA
sequence
Length = 814
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 416 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 357
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 356 agccaagtggctgaaagagttcaac 332
>gb|CN820401.1|CN820401 HRO4418_H10_O20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4418_H10_O20, mRNA
sequence
Length = 730
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 318 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 377
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 378 agccaagtggctgaaagagttcaac 402
>gb|CN820429.1|CN820429 HRO4419_C05_F09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4419_C05_F09, mRNA
sequence
Length = 541
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 102 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 161
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 162 agccaagtggctgaaagagttcaac 186
>gb|CN820430.1|CN820430 HRO4419_C06_F11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4419_C06_F11, mRNA
sequence
Length = 688
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 193 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 252
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 253 agccaagtggctgaaagagttcaac 277
>gb|CN820473.1|CN820473 HRO4419_G06_N11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4419_G06_N11, mRNA
sequence
Length = 455
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 34 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 93
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 94 agccaagtggctgaaagagttcaac 118
>gb|CN820639.1|CN820639 HRO4415_G02_N03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_G02_N03, mRNA
sequence
Length = 641
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 214 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 273
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 274 agccaagtggctgaaagagttcaac 298
>gb|CN820645.1|CN820645 HRO4415_G08_N15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_G08_N15, mRNA
sequence
Length = 646
Score = 58.0 bits (29), Expect = 5e-009
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 124 catgaaggagtctgccaagtggttgaaagagttcaac 160
||||||| |||| ||||||||||||||||||||||||
Sbjct: 335 catgaagaagtcagccaagtggttgaaagagttcaac 371
>gb|CN820938.1|CN820938 HRO4421_F11_K21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_F11_K21, mRNA
sequence
Length = 808
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 602 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 661
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 662 agccaagtggctgaaagagttcaac 686
>gb|CN820994.1|CN820994 HRO4422_C12_E24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4422_C12_E24, mRNA
sequence
Length = 742
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 415 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 474
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 475 agccaagtggctgaaagagttcaac 499
>gb|CN821292.1|CN821292 HRO4423_F10_L19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_F10_L19, mRNA
sequence
Length = 779
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 358 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 417
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 418 agccaagtggctgaaagagttcaac 442
>gb|CN821319.1|CN821319 HRO4424_A02_B04ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_A02_B04, mRNA
sequence
Length = 571
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 139 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 198
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 199 agccaagtggctgaaagagttcaac 223
>gb|CN821357.1|CN821357 HRO4424_D06_H12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_D06_H12, mRNA
sequence
Length = 548
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 101 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 160
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 161 agccaagtggctgaaagagttcaac 185
>gb|CN821463.1|CN821463 HRO4425_F05_K09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_F05_K09, mRNA
sequence
Length = 812
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 725 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 784
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 785 agccaagtggctgaaagagttcaac 809
>gb|CN821599.1|CN821599 HRO4408_B05_D10ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4408_B05_D10, mRNA
sequence
Length = 730
Score = 58.0 bits (29), Expect = 5e-009
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 413 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 472
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||||||||||||||
Sbjct: 473 agccaagtggctgaaagagttcaac 497
>gb|AF082991.1|AF082991 Avena sativa beta-D-glucosidase beta subunit precursor (P60b) mRNA,
complete cds
Length = 1923
Score = 58.0 bits (29), Expect = 5e-009
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 124 catgaaggagtctgccaagtggttgaaagagttcaac 160
||||||| |||| ||||||||||||||||||||||||
Sbjct: 1608 catgaagaagtcagccaagtggttgaaagagttcaac 1644
>gb|CN819479.1|CN819479 HRO4406_E06_I12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4406_E06_I12, mRNA
sequence
Length = 637
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 548 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 607
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 608 agccaagtggctgaaagagttcaa 631
>gb|CN819539.1|CN819539 HRO4401_D01_G01ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_D01_G01, mRNA
sequence
Length = 547
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 102 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 161
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 162 agccaagtggctgaaagagttcaa 185
>gb|CN819877.1|CN819877 HRO4407_B11_D21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_B11_D21, mRNA
sequence
Length = 595
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 139 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 198
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 199 agccaagtggctgaaagagttcaa 222
>gb|CN819879.1|CN819879 HRO4407_C03_F05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_C03_F05, mRNA
sequence
Length = 623
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 188 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 247
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 248 agccaagtggctgaaagagttcaa 271
>gb|CN819968.1|CN819968 HRO4409_C11_E21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4409_C11_E21, mRNA
sequence
Length = 723
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 388 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 447
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 448 agccaagtggctgaaagagttcaa 471
>gb|CN820001.1|CN820001 HRO4409_G10_M19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4409_G10_M19, mRNA
sequence
Length = 565
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 102 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 161
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 162 agccaagtggctgaaagagttcaa 185
>gb|CN820036.1|CN820036 HRO4410_D06_G12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4410_D06_G12, mRNA
sequence
Length = 825
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 404 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 463
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 464 agccaagtggctgaaagagttcaa 487
>gb|CN820529.1|CN820529 HRO4413_D08_G15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4413_D08_G15, mRNA
sequence
Length = 710
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 337 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 396
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 397 agccaagtggctgaaagagttcaa 420
>gb|CN820578.1|CN820578 HRO4415_A09_B17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_A09_B17, mRNA
sequence
Length = 700
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 266 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 207
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 206 agccaagtggctgaaagagttcaa 183
>gb|CN821121.1|CN821121 HRO4427_G03_N05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4427_G03_N05, mRNA
sequence
Length = 566
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 150 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 209
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 210 agccaagtggctgaaagagttcaa 233
>gb|CN821580.1|CN821580 HRO4426_H09_O18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4426_H09_O18, mRNA
sequence
Length = 432
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 11 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 70
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 71 agccaagtggctgaaagagttcaa 94
>emb|X78433.1|ASLBDG A.sativa L. mRNA for beta-D-glucosidase
Length = 1898
Score = 56.0 bits (28), Expect = 2e-008
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| || |||| |||| ||||||| ||||
Sbjct: 1560 acgttttggcatcgtctacatcgaccgcaatgatggttgcaagcgcatcatgaagaagtc 1619
Query: 136 tgccaagtggttgaaagagttcaa 159
||||||||| |||||||||||||
Sbjct: 1620 agccaagtggctgaaagagttcaa 1643
>gb|CN821151.1|CN821151 HRO4428_A10_B20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_A10_B20, mRNA
sequence
Length = 826
Score = 52.0 bits (26), Expect = 3e-007
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 76 acgttatggcattgtctacgtcgaccgcaacaataactgcacgcgctacatgaaggagtc 135
||||| |||||| |||||| |||||||||| | ||||| |||| ||||||| ||||
Sbjct: 607 acgttttggcatcgtctacatcgaccgcaatgacggctgcaagcgcatcatgaagaagtc 666
Query: 136 tgccaagtggttgaaagagttcaac 160
||||||||| ||| ||||||||||
Sbjct: 667 agccaagtggctganagagttcaac 691
>gb|CN819732.1|CN819732 HRO4403_E02_J03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4403_E02_J03, mRNA
sequence
Length = 598
Score = 50.1 bits (25), Expect = 1e-006
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 124 catgaaggagtctgccaagtggttgaaagagttcaac 160
||||||| |||| ||||||||||||| ||||||||||
Sbjct: 217 catgaagaagtcagccaagtggttgagagagttcaac 253
>gb|CN819704.1|CN819704 HRO4403_B09_D17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4403_B09_D17, mRNA
sequence
Length = 433
Score = 48.1 bits (24), Expect = 5e-006
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 124 catgaaggagtctgccaagtggttgaaagagttcaa 159
||||||| |||| ||||||||| |||||||||||||
Sbjct: 60 catgaagaagtcagccaagtggctgaaagagttcaa 95
>gb|CN815884.1|CN815884 HRO4511_E10_J19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_E10_J19, mRNA sequence
Length = 707
Score = 46.1 bits (23), Expect = 2e-005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactttga 54
|||||||| || |||||||| ||||||||||||||
Sbjct: 500 ggctactttgcatggtctctcctggacaactttga 534
>gb|CN820243.1|CN820243 HRO4417_B07_C13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_B07_C13, mRNA
sequence
Length = 335
Score = 46.1 bits (23), Expect = 2e-005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactttga 54
|||||||| || |||||||| ||||||||||||||
Sbjct: 17 ggctactttgcatggtctctcctggacaactttga 51
>gb|CN820950.1|CN820950 HRO4421_G11_M21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_G11_M21, mRNA
sequence
Length = 840
Score = 46.1 bits (23), Expect = 2e-005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactttga 54
|||||||| || |||||||| ||||||||||||||
Sbjct: 585 ggctactttgcatggtctctcctggacaactttga 619
>gb|CN821349.1|CN821349 HRO4424_C10_F20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_C10_F20, mRNA
sequence
Length = 628
Score = 46.1 bits (23), Expect = 2e-005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactttga 54
|||||||| || |||||||| ||||||||||||||
Sbjct: 326 ggctactttgcatggtctctcctggacaactttga 360
>gb|CN819908.1|CN819908 HRO4407_F10_L19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_F10_L19, mRNA
sequence
Length = 633
Score = 42.1 bits (21), Expect = 3e-004
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 124 catgaaggagtctgccaagtggttgaaagagtt 156
||||||| |||| ||||||||||||| ||||||
Sbjct: 254 catgaagaagtcagccaagtggttgagagagtt 286
>gb|CN821286.1|CN821286 HRO4423_F02_L03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_F02_L03, mRNA
sequence
Length = 770
Score = 42.1 bits (21), Expect = 3e-004
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 124 catgaaggagtctgccaagtggttgaaagagtt 156
||||||| |||| ||||||||||||| ||||||
Sbjct: 504 catgaagaagtcagccaagtggttgagagagtt 536
>emb|X75777.1|ASTCPP1 A.sativa (Pewi) ASTCP-K19 mRNA for t complex polypeptide 1
Length = 2039
Score = 32.2 bits (16), Expect = 0.29
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctc 38
||||||||||||||||
Sbjct: 1299 tacttcgcttggtctc 1284
>emb|X75778.1|ASTCPP1A A.sativa (Pewi) ASTCP-K36 mRNA for t complex polypeptide 1
Length = 2022
Score = 32.2 bits (16), Expect = 0.29
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctc 38
||||||||||||||||
Sbjct: 1324 tacttcgcttggtctc 1309
>gb|CN820997.1|CN820997 HRO4422_D04_G08ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4422_D04_G08, mRNA
sequence
Length = 645
Score = 30.2 bits (15), Expect = 1.2
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 140 aagtggttgaaagag 154
|||||||||||||||
Sbjct: 319 aagtggttgaaagag 333
>gb|CN815731.1|CN815731 HRO4514_H07_O14ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4514_H07_O14, mRNA sequence
Length = 710
Score = 28.2 bits (14), Expect = 4.6
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 1 cttgggatcaaatg 14
||||||||||||||
Sbjct: 441 cttgggatcaaatg 454
>gb|CN816449.1|CN816449 HRO4520_H02_P04ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4520_H02_P04, mRNA sequence
Length = 670
Score = 28.2 bits (14), Expect = 4.6
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 79 ttatggcattgtct 92
||||||||||||||
Sbjct: 609 ttatggcattgtct 622
>gb|CN817536.1|CN817536 HRO4463_H05_O09ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4463_H05_O09, mRNA sequence
Length = 826
Score = 28.2 bits (14), Expect = 4.6
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 1 cttgggatcaaatg 14
||||||||||||||
Sbjct: 716 cttgggatcaaatg 729
>gb|CN819392.1|CN819392 HRO4405_E01_I01ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4405_E01_I01, mRNA
sequence
Length = 717
Score = 28.2 bits (14), Expect = 4.6
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 143 tggttgaaagagtt 156
||||||||||||||
Sbjct: 605 tggttgaaagagtt 618
>gb|CN821629.1|CN821629 HRO4408_D12_H24Z Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4408_D12_H24, mRNA
sequence
Length = 706
Score = 28.2 bits (14), Expect = 4.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 7 atcaaatgtgcaag 20
||||||||||||||
Sbjct: 169 atcaaatgtgcaag 156
Database: Avena_nucl_with_EST.fasta
Posted date: May 2, 2006 2:37 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 471
Number of Sequences: 8143
Number of extensions: 471
Number of successful extensions: 146
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93
Number of HSP's gapped (non-prelim): 53
length of query: 333
length of database: 4,702,463
effective HSP length: 15
effective length of query: 318
effective length of database: 4,580,318
effective search space: 1456541124
effective search space used: 1456541124
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)