BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 131537.2.65
         (673 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN817060.1|CN817060  HRO4527_G09_N17ZS5 Lib AA071E1X Aven...   462   e-130
gb|CN820741.1|CN820741  HRO4414_B07_C14ZS5 Lib AA069E1X Aven...   412   e-115
gb|CN815219.1|CN815219  HRO4507_C01_F01ZS5 Lib AA071E1X Aven...   408   e-114
gb|CN821624.1|CN821624  HRO4408_D06_H12ZS5 Lib AA069E1X Aven...   406   e-113
gb|CN815929.1|CN815929  HRO4515_A08_B15ZS5 Lib AA071E1X Aven...   394   e-110
gb|CN816090.1|CN816090  HRO4516_H02_P04ZS5 Lib AA071E1X Aven...   325   3e-089
gb|CN817108.1|CN817108  HRO4528_C10_F20ZS5 Lib AA071E1X Aven...   280   2e-075
gb|CN815430.1|CN815430  HRO4509_F01_K01ZS5 Lib AA071E1X Aven...   204   7e-053
gb|CN816143.1|CN816143  HRO4517_E01_I01ZS5 Lib AA071E1X Aven...   194   7e-050
gb|CN815591.1|CN815591  HRO4513_D04_G07ZS5 Lib AA071E1X Aven...    34   0.15 
gb|CN820602.1|CN820602  HRO4415_C12_F23ZS5 Lib AA069E1X Aven...    34   0.15 
>gb|CN817060.1|CN817060 HRO4527_G09_N17ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4527_G09_N17, mRNA sequence
          Length = 412

 Score =  462 bits (233), Expect = e-130
 Identities = 275/289 (95%)
 Strand = Plus / Plus

                                                                       
Query: 247 agaaggccaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcagg 306
           ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 11  agaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctgaagcagg 70

                                                                       
Query: 307 tgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacg 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  tgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacg 130

                                                                       
Query: 367 acatcttcgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagccca 426
           ||||||| ||||| ||||| |||||||| |||||||| || |||||||||||||||||||
Sbjct: 131 acatctttgagaaactcgctggcgaggccgccaagctggcgcgctacaacaagaagccca 190

                                                                       
Query: 427 ccatcacctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgcca 486
           ||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 191 ccatcacctcccgggagatccagacctccgtccgccttgtcctccccggcgagctcgcca 250

                                                            
Query: 487 agcacgccgtctcggagggcaccaaggccgtcaccaagttcacctcgtc 535
           |||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 251 agcacgccgtgtcagagggcaccaaggccgtcaccaagttcacctcgtc 299
>gb|CN820741.1|CN820741 HRO4414_B07_C14ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
           leaf Avena sativa cDNA clone HRO4414_B07_C14, mRNA
           sequence
          Length = 454

 Score =  412 bits (208), Expect = e-115
 Identities = 253/268 (94%)
 Strand = Plus / Plus

                                                                       
Query: 262 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 321
           |||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 11  gcgtcgagacctacaagatctacatcttcaaggtcctcaagcaggtgcacccggacatcg 70

                                                                       
Query: 322 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 130

                                                                       
Query: 382 tcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccggg 441
           |||| |||||| | |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 131 tcgctggcgagtccgccaagctggcccgctacaacaagaagcccaccatcacctcccggg 190

                                                                       
Query: 442 agatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcgg 501
           ||||||||||||||||||||||||| || || || ||||||||||||||||| ||||| |
Sbjct: 191 agatccagacctccgtccgcctcgtcctcccaggggagctcgccaagcacgctgtctctg 250

                                       
Query: 502 agggcaccaaggccgtcaccaagttcac 529
           ||||||||||||||||||| ||||||||
Sbjct: 251 agggcaccaaggccgtcacaaagttcac 278
>gb|CN815219.1|CN815219 HRO4507_C01_F01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4507_C01_F01, mRNA sequence
          Length = 365

 Score =  408 bits (206), Expect = e-114
 Identities = 263/282 (93%)
 Strand = Plus / Plus

                                                                       
Query: 245 gaagaaggccaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 304
           ||||||||| ||||||||||| ||||| ||||||||||||||||||||||| || |||||
Sbjct: 50  gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtcctcaagca 109

                                                                       
Query: 305 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 169

                                                                       
Query: 365 cgacatcttcgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcc 424
           ||||||||| ||||| ||||| |||||| | ||||||||||||||||| |||||||||||
Sbjct: 170 cgacatctttgagaaactcgctggcgagtctgccaagctcgcccgctataacaagaagcc 229

                                                                       
Query: 425 caccatcacctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgc 484
           ||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||
Sbjct: 230 caccatcacctcccgggagatccagacctccgtccgccttgtcctccccggcgagcttgc 289

                                                     
Query: 485 caagcacgccgtctcggagggcaccaaggccgtcaccaagtt 526
           ||||||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 290 caagcacgcggtctccgagggcaccaaggctgtcacaaagtt 331
>gb|CN821624.1|CN821624 HRO4408_D06_H12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
           leaf Avena sativa cDNA clone HRO4408_D06_H12, mRNA
           sequence
          Length = 415

 Score =  406 bits (205), Expect = e-113
 Identities = 265/285 (92%)
 Strand = Plus / Plus

                                                                       
Query: 245 gaagaaggccaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 304
           ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 22  gaagaaggcaaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 81

                                                                       
Query: 305 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 364
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 82  ggtgcacccggacatcggcatatcctccaaggccatgtccatcatgaactccttcattaa 141

                                                                       
Query: 365 cgacatcttcgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcc 424
           ||||||||| |||||||| || || ||| | ||||||||||| |||||||||||||||||
Sbjct: 142 cgacatctttgagaagcttgctggggagtctgccaagctcgctcgctacaacaagaagcc 201

                                                                       
Query: 425 caccatcacctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgc 484
           ||||||||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 202 caccatcacctcccgggagatacagacctctgtccgcctcgtcctccccggcgagctcgc 261

                                                        
Query: 485 caagcacgccgtctcggagggcaccaaggccgtcaccaagttcac 529
           ||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct: 262 caagcacgctgtctctgagggcaccaaggctgtcaccaagttcac 306
>gb|CN815929.1|CN815929 HRO4515_A08_B15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4515_A08_B15, mRNA sequence
          Length = 655

 Score =  394 bits (199), Expect = e-110
 Identities = 268/291 (92%)
 Strand = Plus / Plus

                                                                       
Query: 245 gaagaaggccaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 304
           |||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 62  gaagaaagccaagaagagcgtagagacatacaagatctacatcttcaaggtcctgaagca 121

                                                                       
Query: 305 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 364
           |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggtgcatcccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 181

                                                                       
Query: 365 cgacatcttcgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcc 424
           ||||||||||||||| ||||| |||||| |||| ||||| ||  | ||||||||||||||
Sbjct: 182 cgacatcttcgagaaactcgctggcgagtcggcaaagcttgcgaggtacaacaagaagcc 241

                                                                       
Query: 425 caccatcacctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgc 484
           ||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||
Sbjct: 242 caccatcacctcccgggagatccagacctccgtccgccttgtcctccccggggagctcgc 301

                                                              
Query: 485 caagcacgccgtctcggagggcaccaaggccgtcaccaagttcacctcgtc 535
           |||||| ||||| || |||||||||||||| ||||| ||||||||||||||
Sbjct: 302 caagcatgccgtgtccgagggcaccaaggctgtcacgaagttcacctcgtc 352
>gb|CN816090.1|CN816090 HRO4516_H02_P04ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4516_H02_P04, mRNA sequence
          Length = 472

 Score =  325 bits (164), Expect = 3e-089
 Identities = 239/264 (90%)
 Strand = Plus / Plus

                                                                       
Query: 266 ggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcat 325
           |||||| ||||||||||||||||||||||| || |||||||| ||||| |||||||||||
Sbjct: 10  ggagacctacaagatctacatcttcaaggtcctcaagcaggtccaccccgacatcggcat 69

                                                                       
Query: 326 ctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgc 385
           |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 70  ctcctccaaggccatgtccatcatgaactccttcatcaacgatatctttgagaagctggc 129

                                                                       
Query: 386 cggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgggagat 445
            |||||| | |||||||||||  | ||||||||||||||||||||||||||| |||||||
Sbjct: 130 tggcgagtctgccaagctcgcgaggtacaacaagaagcccaccatcacctccagggagat 189

                                                                       
Query: 446 ccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcggaggg 505
           |||||| || || || || || || || || ||||||||||||||||||||||| |||||
Sbjct: 190 ccagacttctgttcgtcttgtgcttccaggggagctcgccaagcacgccgtctctgaggg 249

                                   
Query: 506 caccaaggccgtcaccaagttcac 529
           ||||||||||||||||||||||||
Sbjct: 250 caccaaggccgtcaccaagttcac 273
>gb|CN817108.1|CN817108 HRO4528_C10_F20ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4528_C10_F20, mRNA sequence
          Length = 360

 Score =  280 bits (141), Expect = 2e-075
 Identities = 192/209 (91%)
 Strand = Plus / Plus

                                                                       
Query: 321 ggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 380
           ||||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 11  ggcatatcctcctaggccatgtccatcatgaactccttcattaacgacatctttgagaag 70

                                                                       
Query: 381 ctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgg 440
           || || || ||| | ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 71  cttgctggggagtctgccaagctcgctcgctacaacaagaagcccaccatcacctcccgg 130

                                                                       
Query: 441 gagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcg 500
           ||||| |||||||| ||||||||||| || ||||||||||||||||||||||| ||||| 
Sbjct: 131 gagatacagacctctgtccgcctcgtcctccccggcgagctcgccaagcacgctgtctct 190

                                        
Query: 501 gagggcaccaaggccgtcaccaagttcac 529
           |||||||||||||| ||||||||||||||
Sbjct: 191 gagggcaccaaggctgtcaccaagttcac 219
>gb|CN815430.1|CN815430 HRO4509_F01_K01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4509_F01_K01, mRNA sequence
          Length = 361

 Score =  204 bits (103), Expect = 7e-053
 Identities = 133/143 (93%)
 Strand = Plus / Plus

                                                                       
Query: 396 gccaagctcgcccgctacaacaagaagcccaccatcacctcccgggagatccagacctcc 455
           |||||||||||  | ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 33  gccaagctcgcgaggtacaacaagaagcccaccatcacctccagggagatccagacctcc 92

                                                                       
Query: 456 gtccgcctcgttctacccggcgagctcgccaagcacgccgtctcggagggcaccaaggcc 515
           ||||||||||| || ||||||||||||||||||||||| ||||| |||||||||||||| 
Sbjct: 93  gtccgcctcgtcctccccggcgagctcgccaagcacgctgtctccgagggcaccaaggct 152

                                  
Query: 516 gtcaccaagttcacctcgtccta 538
           ||||||||||||||||| |||||
Sbjct: 153 gtcaccaagttcacctcttccta 175
>gb|CN816143.1|CN816143 HRO4517_E01_I01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4517_E01_I01, mRNA sequence
          Length = 384

 Score =  194 bits (98), Expect = 7e-050
 Identities = 147/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                       
Query: 371 cttcgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccat 430
           ||||||||| ||  |||| ||| | ||||||||||||||||  | |||||||||||||||
Sbjct: 11  cttcgagaaactttccggggagtccgccaagctcgcccgcttta-caagaagcccaccat 69

                                                                       
Query: 431 cacctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagca 490
           ||||||| |||||||||||||||||||||||||||| || ||||| || |||||||||||
Sbjct: 70  cacctccagggagatccagacctccgtccgcctcgtcctccccggggaactcgccaagca 129

                                                     
Query: 491 cgccgtctcggagggcaccaaggccgtcaccaagttcacctc 532
           ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 130 cgccgtctctgagggcaccaaggccgtcaccaagttcacctc 171
>gb|CN815591.1|CN815591 HRO4513_D04_G07ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root
          Avena sativa cDNA clone HRO4513_D04_G07, mRNA sequence
          Length = 815

 Score = 34.2 bits (17), Expect = 0.15
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                           
Query: 1  ggcacgaggctgcattc 17
          |||||||||||||||||
Sbjct: 2  ggcacgaggctgcattc 18
>gb|CN820602.1|CN820602 HRO4415_C12_F23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
          leaf Avena sativa cDNA clone HRO4415_C12_F23, mRNA
          sequence
          Length = 806

 Score = 34.2 bits (17), Expect = 0.15
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                           
Query: 1  ggcacgaggctgcattc 17
          |||||||||||||||||
Sbjct: 2  ggcacgaggctgcattc 18
  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2165
Number of Sequences: 8143
Number of extensions: 2165
Number of successful extensions: 617
Number of sequences better than  0.5: 11
Number of HSP's better than  0.5 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 599
Number of HSP's gapped (non-prelim): 17
length of query: 673
length of database: 4,702,463
effective HSP length: 16
effective length of query: 657
effective length of database: 4,572,175
effective search space: 3003918975
effective search space used: 3003918975
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)