BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QCM14d12.yg.2.1
         (593 letters)

Database: At_nucl_with_EST.fasta 
           1,013,581 sequences; 908,940,872 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AB016893.1|  Arabidopsis thaliana genomic DNA, chromosom...    90   5e-016
dbj|BA000015.5|  Arabidopsis thaliana DNA, chromosome 5, com...    90   5e-016
ref|NM_121024.1|  Arabidopsis thaliana CESA5 (CELLULASE SYNT...    90   5e-016
ref|NC_003076.4|  Arabidopsis thaliana chromosome 5, complet...    90   5e-016
gb|AC007019.5|  Arabidopsis thaliana chromosome 2 clone F7D8...    66   7e-009
ref|NM_127746.1|  Arabidopsis thaliana CESA9 (CELLULASE SYNT...    66   7e-009
ref|NC_003071.3|  Arabidopsis thaliana chromosome 2, complet...    66   7e-009
gb|AF267742.1|AF267742  Arabidopsis thaliana cellulose synth...    64   3e-008
gb|AQ955592.1|AQ955592  LERAE88TF LERA Arabidopsis thaliana ...    62   1e-007
gb|AF091713.1|AF091713  Arabidopsis thaliana cellulose synth...    58   2e-006
gb|AF088917.1|AF088917  Arabidopsis thaliana cellulose synth...    58   2e-006
gb|AY139754.1|  Arabidopsis thaliana AT5g17420/T10B6_80 mRNA...    58   2e-006
gb|BT004543.1|  Arabidopsis thaliana AT5g17420/T10B6_80 gene...    58   2e-006
emb|AL391142.1|ATT10B6  Arabidopsis thaliana DNA chromosome ...    58   2e-006
ref|NM_121748.2|  Arabidopsis thaliana IRX3 (IRREGULAR XYLEM...    58   2e-006
gb|AY099636.1|  Arabidopsis thaliana cellulose synthase-like...    56   7e-006
emb|AJ270060.1|  Arabidopsis thaliana DNA chromosome 4, long...    56   7e-006
emb|AL035526.1|ATF28A21  Arabidopsis thaliana DNA chromosome...    56   7e-006
emb|AL161549.2|ATCHRIV49  Arabidopsis thaliana DNA chromosom...    56   7e-006
ref|NM_117994.2|  Arabidopsis thaliana CESA8 (CELLULASE SYNT...    56   7e-006
ref|NC_003075.3|  Arabidopsis thaliana chromosome 4, complet...    56   7e-006
gb|AF027173.1|AF027173  Arabidopsis thaliana cellulose synth...    52   1e-004
dbj|BD022675.1|  Manipulation of cellulose and/or beta-1,4-g...    52   1e-004
emb|AX505864.1|  Sequence 559 from Patent WO0216655                52   1e-004
emb|AX030941.1|  Sequence 4 from Patent WO9800549                  52   1e-004
emb|AL050351.1|ATT22F8  Arabidopsis thaliana DNA chromosome ...    52   1e-004
emb|AL161595.2|ATCHRIV91  Arabidopsis thaliana DNA chromosom...    52   1e-004
ref|NM_120095.2|  Arabidopsis thaliana CESA2; cellulose synt...    52   1e-004
gb|AQ955593.1|AQ955593  LERAE88TR LERA Arabidopsis thaliana ...    50   4e-004
gb|AV823575.1|AV823575  AV823575 RAFL5 Arabidopsis thaliana ...    50   4e-004
gb|AF062485.1|AF062485  Arabidopsis thaliana cellulose synth...    50   4e-004
dbj|BD022677.1|  Manipulation of cellulose and/or beta-1,4-g...    50   4e-004
emb|AX507835.1|  Sequence 2530 from Patent WO0216655               50   4e-004
emb|AX030944.1|  Sequence 7 from Patent WO9800549                  50   4e-004
emb|BX832166.1|CNS0A1ML  Arabidopsis thaliana Full-length cD...    50   4e-004
dbj|AB025637.1|  Arabidopsis thaliana genomic DNA, chromosom...    50   4e-004
ref|NM_125870.2|  Arabidopsis thaliana CESA6 (CELLULASE SYNT...    50   4e-004
gb|CW840637.1|CW840637  ET10337.Ds3.06.12.2002.jw43.284 Arab...    46   0.007
gb|BT005743.1|  Arabidopsis thaliana clone RAFL15-50-B21 (R5...    46   0.007
emb|AL035538.1|ATF20D10  Arabidopsis thaliana DNA chromosome...    46   0.007
emb|AL161593.2|ATCHRIV89  Arabidopsis thaliana DNA chromosom...    46   0.007
ref|NM_119980.2|  Arabidopsis thaliana ATCSLD4; cellulose sy...    46   0.007
gb|AF458083.1|  Arabidopsis thaliana cellulose synthase (IRX...    44   0.027
gb|BT005710.1|  Arabidopsis thaliana clone RAFL15-30-K05 (R5...    44   0.027
gb|BT006111.1|  Arabidopsis thaliana clone U50150 putative c...    44   0.027
ref|NM_123770.2|  Arabidopsis thaliana CESA4 (CELLULASE SYNT...    44   0.027
>dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH9
          Length = 82390

 Score = 89.7 bits (45), Expect = 5e-016
 Identities = 108/129 (83%)
 Strand = Plus / Minus

                                                                         
Query: 372   aaaataccattcaggagcccgaggctcgattttgtgtttcttacagaagggaacccattt 431
             |||||||||||| ||||| || ||||||||  ||| |||||||||||| |||||||||||
Sbjct: 28095 aaaataccattcgggagctcgtggctcgatagtgtatttcttacagaaaggaacccattt 28036

                                                                         
Query: 432   tcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcattgcagcaccatcatc 491
              |  |||||      |||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 28035 cctagcaaactctgctgtttctgaaagggcttcaaaagtaagcatagcagcaccatcatc 27976

                      
Query: 492   cgacacata 500
              || |||||
Sbjct: 27975 agaaacata 27967
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
          Length = 23810767

 Score = 89.7 bits (45), Expect = 5e-016
 Identities = 108/129 (83%)
 Strand = Plus / Minus

                                                                           
Query: 372     aaaataccattcaggagcccgaggctcgattttgtgtttcttacagaagggaacccattt 431
               |||||||||||| ||||| || ||||||||  ||| |||||||||||| |||||||||||
Sbjct: 2894417 aaaataccattcgggagctcgtggctcgatagtgtatttcttacagaaaggaacccattt 2894358

                                                                           
Query: 432     tcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcattgcagcaccatcatc 491
                |  |||||      |||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 2894357 cctagcaaactctgctgtttctgaaagggcttcaaaagtaagcatagcagcaccatcatc 2894298

                        
Query: 492     cgacacata 500
                || |||||
Sbjct: 2894297 agaaacata 2894289

 Score = 58.0 bits (29), Expect = 2e-006
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                
Query: 408     tttcttacagaagggaacccattttcgtgcaaa 440
               |||||||||||||||||||||||||| ||||||
Sbjct: 5492271 tttcttacagaagggaacccattttcttgcaaa 5492303

 Score = 50.1 bits (25), Expect = 4e-004
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                            
Query: 460      gcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaaca 519
                ||||| ||||||||||| |||||||||||||| || || || ||   ||| ||||| |||
Sbjct: 22908811 gcttcgaaagtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgaca 22908752

                                          
Query: 520      ggataatnnacagcnagtatggacaa 545
                |||||||  ||||| || || |||||
Sbjct: 22908751 ggataatcaacagcaagaatagacaa 22908726
>ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNTHASE 5); transferase,
            transferring glycosyl groups AT5G09870 (CESA5) mRNA,
            complete cds
          Length = 3210

 Score = 89.7 bits (45), Expect = 5e-016
 Identities = 108/129 (83%)
 Strand = Plus / Minus

                                                                        
Query: 372  aaaataccattcaggagcccgaggctcgattttgtgtttcttacagaagggaacccattt 431
            |||||||||||| ||||| || ||||||||  ||| |||||||||||| |||||||||||
Sbjct: 1266 aaaataccattcgggagctcgtggctcgatagtgtatttcttacagaaaggaacccattt 1207

                                                                        
Query: 432  tcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcattgcagcaccatcatc 491
             |  |||||      |||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 1206 cctagcaaactctgctgtttctgaaagggcttcaaaagtaagcatagcagcaccatcatc 1147

                     
Query: 492  cgacacata 500
             || |||||
Sbjct: 1146 agaaacata 1138
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
          Length = 26992728

 Score = 89.7 bits (45), Expect = 5e-016
 Identities = 108/129 (83%)
 Strand = Plus / Minus

                                                                           
Query: 372     aaaataccattcaggagcccgaggctcgattttgtgtttcttacagaagggaacccattt 431
               |||||||||||| ||||| || ||||||||  ||| |||||||||||| |||||||||||
Sbjct: 3075332 aaaataccattcgggagctcgtggctcgatagtgtatttcttacagaaaggaacccattt 3075273

                                                                           
Query: 432     tcgtgcaaatagacatgtttctgtaagtgcttcaaaagtaagcattgcagcaccatcatc 491
                |  |||||      |||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 3075272 cctagcaaactctgctgtttctgaaagggcttcaaaagtaagcatagcagcaccatcatc 3075213

                        
Query: 492     cgacacata 500
                || |||||
Sbjct: 3075212 agaaacata 3075204

 Score = 58.0 bits (29), Expect = 2e-006
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                
Query: 408     tttcttacagaagggaacccattttcgtgcaaa 440
               |||||||||||||||||||||||||| ||||||
Sbjct: 5739298 tttcttacagaagggaacccattttcttgcaaa 5739330

 Score = 50.1 bits (25), Expect = 4e-004
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                            
Query: 460      gcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaaca 519
                ||||| ||||||||||| |||||||||||||| || || || ||   ||| ||||| |||
Sbjct: 25900724 gcttcgaaagtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgaca 25900665

                                          
Query: 520      ggataatnnacagcnagtatggacaa 545
                |||||||  ||||| || || |||||
Sbjct: 25900664 ggataatcaacagcaagaatagacaa 25900639
>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete
             sequence
          Length = 107848

 Score = 65.9 bits (33), Expect = 7e-009
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                         
Query: 372   aaaataccattcaggagcccgaggctcgattttgtgtttcttacagaagggaacccattt 431
             |||||||||||||||||| || ||||||||  ||   ||||||||||| |||||||||||
Sbjct: 17836 aaaataccattcaggagcgcgtggctcgatgctgaacttcttacagaaaggaacccattt 17777

                      
Query: 432   tcgtgcaaa 440
             || ||||||
Sbjct: 17776 tcttgcaaa 17768

 Score = 58.0 bits (29), Expect = 2e-006
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 460   gcttcaaaagtaagcattgcagcaccatcatccgacacata 500
             |||||||| ||||||||||||||||||||||| || |||||
Sbjct: 17748 gcttcaaatgtaagcattgcagcaccatcatctgatacata 17708
>ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNTHASE 9); transferase,
            transferring glycosyl groups AT2G21770 (CESA9) mRNA,
            complete cds
          Length = 3308

 Score = 65.9 bits (33), Expect = 7e-009
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 372  aaaataccattcaggagcccgaggctcgattttgtgtttcttacagaagggaacccattt 431
            |||||||||||||||||| || ||||||||  ||   ||||||||||| |||||||||||
Sbjct: 1320 aaaataccattcaggagcgcgtggctcgatgctgaacttcttacagaaaggaacccattt 1261

                     
Query: 432  tcgtgcaaa 440
            || ||||||
Sbjct: 1260 tcttgcaaa 1252

 Score = 58.0 bits (29), Expect = 2e-006
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 460  gcttcaaaagtaagcattgcagcaccatcatccgacacata 500
            |||||||| ||||||||||||||||||||||| || |||||
Sbjct: 1232 gcttcaaatgtaagcattgcagcaccatcatctgatacata 1192
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
          Length = 19705359

 Score = 65.9 bits (33), Expect = 7e-009
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                           
Query: 372     aaaataccattcaggagcccgaggctcgattttgtgtttcttacagaagggaacccattt 431
               |||||||||||||||||| || ||||||||  ||   ||||||||||| |||||||||||
Sbjct: 9293993 aaaataccattcaggagcgcgtggctcgatgctgaacttcttacagaaaggaacccattt 9293934

                        
Query: 432     tcgtgcaaa 440
               || ||||||
Sbjct: 9293933 tcttgcaaa 9293925

 Score = 58.0 bits (29), Expect = 2e-006
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                        
Query: 460     gcttcaaaagtaagcattgcagcaccatcatccgacacata 500
               |||||||| ||||||||||||||||||||||| || |||||
Sbjct: 9293905 gcttcaaatgtaagcattgcagcaccatcatctgatacata 9293865
>gb|AF267742.1|AF267742 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX1)
           mRNA, complete cds
          Length = 2958

 Score = 63.9 bits (32), Expect = 3e-008
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 463 tcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaacagga 522
           ||||||| ||||||||||||||||||||| || ||||||||  | |||||||| || |||
Sbjct: 935 tcaaaagaaagcattgcagcaccatcatcagatacatagcaagagactttatccaccgga 876

               
Query: 523 taat 526
           ||||
Sbjct: 875 taat 872
>gb|AQ955592.1|AQ955592 LERAE88TF LERA Arabidopsis thaliana genomic clone LERAE88, DNA
           sequence
          Length = 694

 Score = 61.9 bits (31), Expect = 1e-007
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 463 tcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaacagga 522
           ||||||| ||||||||||||||||||||| || ||||||||  | |||||||| || |||
Sbjct: 63  tcaaaagaaagcattgcagcaccatcatcagatacatagcaagagactttatccaccgga 4

              
Query: 523 taa 525
           |||
Sbjct: 3   taa 1
>gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
            gene, complete cds
          Length = 7234

 Score = 58.0 bits (29), Expect = 2e-006
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 408  tttcttacagaagggaacccattttcgtgcaaa 440
            |||||||||||||||||||||||||| ||||||
Sbjct: 2203 tttcttacagaagggaacccattttcttgcaaa 2171
>gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
            mRNA, complete cds
          Length = 3081

 Score = 58.0 bits (29), Expect = 2e-006
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 408  tttcttacagaagggaacccattttcgtgcaaa 440
            |||||||||||||||||||||||||| ||||||
Sbjct: 1152 tttcttacagaagggaacccattttcttgcaaa 1120
>gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA, complete cds
          Length = 3355

 Score = 58.0 bits (29), Expect = 2e-006
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 408  tttcttacagaagggaacccattttcgtgcaaa 440
            |||||||||||||||||||||||||| ||||||
Sbjct: 1197 tttcttacagaagggaacccattttcttgcaaa 1165
>gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene, complete cds
          Length = 3081

 Score = 58.0 bits (29), Expect = 2e-006
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 408  tttcttacagaagggaacccattttcgtgcaaa 440
            |||||||||||||||||||||||||| ||||||
Sbjct: 1152 tttcttacagaagggaacccattttcttgcaaa 1120
>emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome 5, BAC clone T10B6 (ESSA project)
          Length = 33563

 Score = 58.0 bits (29), Expect = 2e-006
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                              
Query: 408   tttcttacagaagggaacccattttcgtgcaaa 440
             |||||||||||||||||||||||||| ||||||
Sbjct: 23100 tttcttacagaagggaacccattttcttgcaaa 23132
>ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM 3); cellulose synthase
            AT5G17420 (IRX3) mRNA, complete cds
          Length = 3693

 Score = 58.0 bits (29), Expect = 2e-006
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 408  tttcttacagaagggaacccattttcgtgcaaa 440
            |||||||||||||||||||||||||| ||||||
Sbjct: 1197 tttcttacagaagggaacccattttcttgcaaa 1165
>gb|AY099636.1| Arabidopsis thaliana cellulose synthase-like protein (At4g18780)
           mRNA, complete cds
          Length = 3109

 Score = 56.0 bits (28), Expect = 7e-006
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 471 aagcattgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526
           ||||||||||||||||||||| || ||||||||  | |||||||| || |||||||
Sbjct: 994 aagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 939
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
          Length = 14497843

 Score = 56.0 bits (28), Expect = 7e-006
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                       
Query: 471     aagcattgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526
               ||||||||||||||||||||| || ||||||||  | |||||||| || |||||||
Sbjct: 6228106 aagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 6228161

 Score = 52.0 bits (26), Expect = 1e-004
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                            
Query: 364      ttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaaggga 423
                ||||||| ||||||||| |||||||| || |||||||| ||    |||||||| || |||
Sbjct: 14212066 ttctgagaaaaataccactcaggagctcgtggctcgatattaaacttcttacaaaaagga 14212007

                          
Query: 424      acccattttc 433
                ||||||||||
Sbjct: 14212006 acccattttc 14211997

 Score = 46.1 bits (23), Expect = 0.007
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 42       tgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaac 101
                |||||||| ||| |||||||| || |  ||||||| ||||||||  ||||||||||| ||
Sbjct: 13824547 tgcattcatggctccagctttcttgttgtgatcatatccaggccgcttctcacgtgacac 13824606

                   
Query: 102      ata 104
                |||
Sbjct: 13824607 ata 13824609
>emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSA project)
          Length = 94301

 Score = 56.0 bits (28), Expect = 7e-006
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 471   aagcattgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526
             ||||||||||||||||||||| || ||||||||  | |||||||| || |||||||
Sbjct: 74208 aagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 74263
>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
          Length = 199075

 Score = 56.0 bits (28), Expect = 7e-006
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 471   aagcattgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526
             ||||||||||||||||||||| || ||||||||  | |||||||| || |||||||
Sbjct: 93489 aagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 93544
>ref|NM_117994.2| Arabidopsis thaliana CESA8 (CELLULASE SYNTHASE 8); cellulose
           synthase/ transferase, transferring glycosyl groups
           AT4G18780 (CESA8) mRNA, complete cds
          Length = 3217

 Score = 56.0 bits (28), Expect = 7e-006
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 471 aagcattgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526
           ||||||||||||||||||||| || ||||||||  | |||||||| || |||||||
Sbjct: 994 aagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 939
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
          Length = 18585042

 Score = 56.0 bits (28), Expect = 7e-006
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                        
Query: 471      aagcattgcagcaccatcatccgacacatagcagcaaactttatcaacaggataat 526
                ||||||||||||||||||||| || ||||||||  | |||||||| || |||||||
Sbjct: 10315361 aagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 10315416

 Score = 52.0 bits (26), Expect = 1e-004
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                            
Query: 364      ttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaaggga 423
                ||||||| ||||||||| |||||||| || |||||||| ||    |||||||| || |||
Sbjct: 18299266 ttctgagaaaaataccactcaggagctcgtggctcgatattaaacttcttacaaaaagga 18299207

                          
Query: 424      acccattttc 433
                ||||||||||
Sbjct: 18299206 acccattttc 18299197

 Score = 46.1 bits (23), Expect = 0.007
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 42       tgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaac 101
                |||||||| ||| |||||||| || |  ||||||| ||||||||  ||||||||||| ||
Sbjct: 17911752 tgcattcatggctccagctttcttgttgtgatcatatccaggccgcttctcacgtgacac 17911811

                   
Query: 102      ata 104
                |||
Sbjct: 17911812 ata 17911814
>gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-A)
            mRNA, complete cds
          Length = 3771

 Score = 52.0 bits (26), Expect = 1e-004
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                        
Query: 364  ttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaaggga 423
            ||||||| ||||||||| |||||||| || |||||||| ||    |||||||| || |||
Sbjct: 1529 ttctgagaaaaataccactcaggagctcgtggctcgatattaaacttcttacaaaaagga 1470

                      
Query: 424  acccattttc 433
            ||||||||||
Sbjct: 1469 acccattttc 1460
>dbj|BD022675.1| Manipulation of cellulose and/or beta-1,4-glucan
          Length = 5009

 Score = 52.0 bits (26), Expect = 1e-004
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                        
Query: 364  ttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaaggga 423
            ||||||| ||||||||| |||||||| || |||||||| ||    |||||||| || |||
Sbjct: 3060 ttctgagaaaaataccactcaggagctcgtggctcgatattaaacttcttacaaaaagga 3001

                      
Query: 424  acccattttc 433
            ||||||||||
Sbjct: 3000 acccattttc 2991
>emb|AX505864.1| Sequence 559 from Patent WO0216655
          Length = 3255

 Score = 52.0 bits (26), Expect = 1e-004
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                        
Query: 364  ttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaaggga 423
            ||||||| ||||||||| |||||||| || |||||||| ||    |||||||| || |||
Sbjct: 1313 ttctgagaaaaataccactcaggagctcgtggctcgatattaaacttcttacaaaaagga 1254

                      
Query: 424  acccattttc 433
            ||||||||||
Sbjct: 1253 acccattttc 1244
>emb|AX030941.1| Sequence 4 from Patent WO9800549
          Length = 5009

 Score = 52.0 bits (26), Expect = 1e-004
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                        
Query: 364  ttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaaggga 423
            ||||||| ||||||||| |||||||| || |||||||| ||    |||||||| || |||
Sbjct: 3060 ttctgagaaaaataccactcaggagctcgtggctcgatattaaacttcttacaaaaagga 3001

                      
Query: 424  acccattttc 433
            ||||||||||
Sbjct: 3000 acccattttc 2991
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project)
          Length = 89035

 Score = 52.0 bits (26), Expect = 1e-004
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 364   ttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaaggga 423
             ||||||| ||||||||| |||||||| || |||||||| ||    |||||||| || |||
Sbjct: 81964 ttctgagaaaaataccactcaggagctcgtggctcgatattaaacttcttacaaaaagga 81905

                       
Query: 424   acccattttc 433
             ||||||||||
Sbjct: 81904 acccattttc 81895
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
          Length = 198151

 Score = 52.0 bits (26), Expect = 1e-004
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 364   ttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaaggga 423
             ||||||| ||||||||| |||||||| || |||||||| ||    |||||||| || |||
Sbjct: 19441 ttctgagaaaaataccactcaggagctcgtggctcgatattaaacttcttacaaaaagga 19382

                       
Query: 424   acccattttc 433
             ||||||||||
Sbjct: 19381 acccattttc 19372
>ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synthase/ transferase,
            transferring glycosyl groups AT4G39350 (CESA2) mRNA,
            complete cds
          Length = 3726

 Score = 52.0 bits (26), Expect = 1e-004
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                        
Query: 364  ttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaaggga 423
            ||||||| ||||||||| |||||||| || |||||||| ||    |||||||| || |||
Sbjct: 1482 ttctgagaaaaataccactcaggagctcgtggctcgatattaaacttcttacaaaaagga 1423

                      
Query: 424  acccattttc 433
            ||||||||||
Sbjct: 1422 acccattttc 1413
>gb|AQ955593.1|AQ955593 LERAE88TR LERA Arabidopsis thaliana genomic clone LERAE88, DNA
           sequence
          Length = 813

 Score = 50.1 bits (25), Expect = 4e-004
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 463 tcaaaagtaagcattgcagcaccatcatc 491
           ||||||| |||||||||||||||||||||
Sbjct: 783 tcaaaagaaagcattgcagcaccatcatc 811
>gb|AV823575.1|AV823575 AV823575 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-21-E11 5',
           mRNA sequence
          Length = 582

 Score = 50.1 bits (25), Expect = 4e-004
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 460 gcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaaca 519
           ||||| ||||||||||| |||||||||||||| || || || ||   ||| ||||| |||
Sbjct: 182 gcttcgaaagtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgaca 123

                                     
Query: 520 ggataatnnacagcnagtatggacaa 545
           |||||||  ||||| || || |||||
Sbjct: 122 ggataatcaacagcaagaatagacaa 97
>gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synthase mRNA, partial cds
          Length = 3444

 Score = 50.1 bits (25), Expect = 4e-004
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 460  gcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaaca 519
            ||||| ||||||||||| |||||||||||||| || || || ||   ||| ||||| |||
Sbjct: 1206 gcttcgaaagtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgaca 1147

                                      
Query: 520  ggataatnnacagcnagtatggacaa 545
            |||||||  ||||| || || |||||
Sbjct: 1146 ggataatcaacagcaagaatagacaa 1121
>dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-glucan
          Length = 3828

 Score = 50.1 bits (25), Expect = 4e-004
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                        
Query: 364  ttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaaggga 423
            ||||||| ||||||||| |||||||| || |||||||| ||    |||||||| || |||
Sbjct: 1551 ttctgagaaaaataccactcaggagctcgtggctcgatattaaacttcttacaaaaagga 1492

                     
Query: 424  acccatttt 432
            |||||||||
Sbjct: 1491 acccatttt 1483
>emb|AX507835.1| Sequence 2530 from Patent WO0216655
          Length = 3255

 Score = 50.1 bits (25), Expect = 4e-004
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 460  gcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaaca 519
            ||||| ||||||||||| |||||||||||||| || || || ||   ||| ||||| |||
Sbjct: 1214 gcttcgaaagtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgaca 1155

                                      
Query: 520  ggataatnnacagcnagtatggacaa 545
            |||||||  ||||| || || |||||
Sbjct: 1154 ggataatcaacagcaagaatagacaa 1129
>emb|AX030944.1| Sequence 7 from Patent WO9800549
          Length = 3828

 Score = 50.1 bits (25), Expect = 4e-004
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                        
Query: 364  ttctgagcaaaataccattcaggagcccgaggctcgattttgtgtttcttacagaaggga 423
            ||||||| ||||||||| |||||||| || |||||||| ||    |||||||| || |||
Sbjct: 1551 ttctgagaaaaataccactcaggagctcgtggctcgatattaaacttcttacaaaaagga 1492

                     
Query: 424  acccatttt 432
            |||||||||
Sbjct: 1491 acccatttt 1483
>emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH56ZA06 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 3911

 Score = 50.1 bits (25), Expect = 4e-004
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 460  gcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaaca 519
            ||||| ||||||||||| |||||||||||||| || || || ||   ||| ||||| |||
Sbjct: 1641 gcttcgaaagtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgaca 1582

                                      
Query: 520  ggataatnnacagcnagtatggacaa 545
            |||||||  ||||| || || |||||
Sbjct: 1581 ggataatcaacagcaagaatagacaa 1556
>dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MVP7
          Length = 39645

 Score = 50.1 bits (25), Expect = 4e-004
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                         
Query: 460   gcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaaca 519
             ||||| ||||||||||| |||||||||||||| || || || ||   ||| ||||| |||
Sbjct: 20478 gcttcgaaagtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgaca 20419

                                       
Query: 520   ggataatnnacagcnagtatggacaa 545
             |||||||  ||||| || || |||||
Sbjct: 20418 ggataatcaacagcaagaatagacaa 20393
>ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNTHASE 6); transferase,
            transferring glycosyl groups AT5G64740 (CESA6) mRNA,
            complete cds
          Length = 4105

 Score = 50.1 bits (25), Expect = 4e-004
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 460  gcttcaaaagtaagcattgcagcaccatcatccgacacatagcagcaaactttatcaaca 519
            ||||| ||||||||||| |||||||||||||| || || || ||   ||| ||||| |||
Sbjct: 1703 gcttcgaaagtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgaca 1644

                                      
Query: 520  ggataatnnacagcnagtatggacaa 545
            |||||||  ||||| || || |||||
Sbjct: 1643 ggataatcaacagcaagaatagacaa 1618
>gb|CW840637.1|CW840637 ET10337.Ds3.06.12.2002.jw43.284 Arabidopsis thaliana Landsberg Ds
           insertion lines Arabidopsis thaliana genomic clone
           ET10337, DNA sequence
          Length = 284

 Score = 46.1 bits (23), Expect = 0.007
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 42  tgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaac 101
           |||||||| ||| |||||||| || |  ||||||| ||||||||  ||||||||||| ||
Sbjct: 231 tgcattcatggctccagctttcttgttgtgatcatatccaggccgcttctcacgtgacac 172

              
Query: 102 ata 104
           |||
Sbjct: 171 ata 169
>gb|BT005743.1| Arabidopsis thaliana clone RAFL15-50-B21 (R50044) unknown protein
            (At4g38190) mRNA, partial cds
          Length = 3414

 Score = 46.1 bits (23), Expect = 0.007
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 42   tgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaac 101
            |||||||| ||| |||||||| || |  ||||||| ||||||||  ||||||||||| ||
Sbjct: 1667 tgcattcatggctccagctttcttgttgtgatcatatccaggccgcttctcacgtgacac 1608

               
Query: 102  ata 104
            |||
Sbjct: 1607 ata 1605
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20D10 (ESSA project)
          Length = 147215

 Score = 46.1 bits (23), Expect = 0.007
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 42    tgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaac 101
             |||||||| ||| |||||||| || |  ||||||| ||||||||  ||||||||||| ||
Sbjct: 99776 tgcattcatggctccagctttcttgttgtgatcatatccaggccgcttctcacgtgacac 99835

                
Query: 102   ata 104
             |||
Sbjct: 99836 ata 99838
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
          Length = 199789

 Score = 46.1 bits (23), Expect = 0.007
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 42    tgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaac 101
             |||||||| ||| |||||||| || |  ||||||| ||||||||  ||||||||||| ||
Sbjct: 20698 tgcattcatggctccagctttcttgttgtgatcatatccaggccgcttctcacgtgacac 20757

                
Query: 102   ata 104
             |||
Sbjct: 20758 ata 20760
>ref|NM_119980.2| Arabidopsis thaliana ATCSLD4; cellulose synthase/ transferase,
            transferring glycosyl groups AT4G38190 (ATCSLD4) mRNA,
            complete cds
          Length = 3513

 Score = 46.1 bits (23), Expect = 0.007
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 42   tgcattcaaggcaccagcttttttatgatgatcatgtccaggccttttctcacgtgaaac 101
            |||||||| ||| |||||||| || |  ||||||| ||||||||  ||||||||||| ||
Sbjct: 1782 tgcattcatggctccagctttcttgttgtgatcatatccaggccgcttctcacgtgacac 1723

               
Query: 102  ata 104
            |||
Sbjct: 1722 ata 1720
>gb|AF458083.1| Arabidopsis thaliana cellulose synthase (IRX5) mRNA, complete cds
          Length = 3168

 Score = 44.1 bits (22), Expect = 0.027
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 286  aattcttcgtattctctcttcattgc 311
            |||||||| |||||||||||||||||
Sbjct: 1208 aattcttcatattctctcttcattgc 1183
>gb|BT005710.1| Arabidopsis thaliana clone RAFL15-30-K05 (R50150) putative cellulose
            synthase catalytic subunit (At5g44030) mRNA, complete cds
          Length = 3377

 Score = 44.1 bits (22), Expect = 0.027
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 286  aattcttcgtattctctcttcattgc 311
            |||||||| |||||||||||||||||
Sbjct: 1276 aattcttcatattctctcttcattgc 1251
>gb|BT006111.1| Arabidopsis thaliana clone U50150 putative cellulose synthase
            catalytic subunit (At5g44030) mRNA, complete cds
          Length = 3181

 Score = 44.1 bits (22), Expect = 0.027
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 286  aattcttcgtattctctcttcattgc 311
            |||||||| |||||||||||||||||
Sbjct: 1205 aattcttcatattctctcttcattgc 1180
>ref|NM_123770.2| Arabidopsis thaliana CESA4 (CELLULASE SYNTHASE 4); transferase,
            transferring glycosyl groups AT5G44030 (CESA4) mRNA,
            complete cds
          Length = 3745

 Score = 44.1 bits (22), Expect = 0.027
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 286  aattcttcgtattctctcttcattgc 311
            |||||||| |||||||||||||||||
Sbjct: 1273 aattcttcatattctctcttcattgc 1248
  Database: At_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:09 PM
  Number of letters in database: 908,940,872
  Number of sequences in database:  1,013,581
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 284,687
Number of Sequences: 1013581
Number of extensions: 284687
Number of successful extensions: 19590
Number of sequences better than  0.5: 46
Number of HSP's better than  0.5 without gapping: 43
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 18303
Number of HSP's gapped (non-prelim): 1287
length of query: 593
length of database: 908,940,872
effective HSP length: 20
effective length of query: 573
effective length of database: 888,669,252
effective search space: 509207481396
effective search space used: 509207481396
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)