BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH22b04.yg.2.1
(457 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY063923.1| Arabidopsis thaliana putative protein kinase... 153 3e-035
gb|AY091248.1| Arabidopsis thaliana putative protein kinase... 153 3e-035
ref|NM_118795.2| Arabidopsis thaliana kinase AT4G26610 mRNA... 153 3e-035
gb|AY054227.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA,... 111 1e-022
gb|AY062501.1| Arabidopsis thaliana protein kinase 5 (MCA23... 111 1e-022
gb|AY093303.1| Arabidopsis thaliana protein kinase 5 (MCA23... 111 1e-022
gb|AY113177.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA,... 111 1e-022
dbj|D10909.1|ATHPK5 Arabidopsis thaliana gene for serine/th... 111 1e-022
dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosom... 111 1e-022
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 111 1e-022
ref|NM_124149.2| Arabidopsis thaliana kinase AT5G47750 mRNA... 111 1e-022
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 111 1e-022
emb|AL086152.1|CNS00QQY Arabidopsis thaliana genome survey ... 96 6e-018
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 94 2e-017
emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome... 94 2e-017
emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosom... 94 2e-017
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 94 2e-017
gb|B24591.1|B24591 F20P20TF IGF Arabidopsis thaliana genomi... 88 2e-015
gb|BG459176.1|BG459176 M64E21STM Arabidopsis developing see... 86 6e-015
gb|BE524982.1|BE524982 M57B3STM Arabidopsis developing seed... 70 4e-010
emb|AX506135.1| Sequence 830 from Patent WO0216655 70 4e-010
dbj|D10937.1|ATHATPK64 Arabidopsis thaliana ATPK64 mRNA for... 70 4e-010
ref|NM_124973.3| Arabidopsis thaliana kinase AT5G55910 mRNA... 70 4e-010
gb|R87024.1|R87024 16220 Lambda-PRL2 Arabidopsis thaliana c... 64 2e-008
ref|NM_120445.1| Arabidopsis thaliana kinase AT5G03640 mRNA... 58 1e-006
gb|B18482.1|B18482 F12A23-T7 IGF Arabidopsis thaliana genom... 56 5e-006
gb|AV556469.1|AV556469 AV556469 Arabidopsis thaliana green ... 54 2e-005
gb|AV561719.1|AV561719 AV561719 Arabidopsis thaliana green ... 54 2e-005
dbj|AB026659.1| Arabidopsis thaliana genomic DNA, chromosom... 54 2e-005
emb|AL162506.1|ATF17C15 Arabidopsis thaliana DNA chromosome... 54 2e-005
gb|T44379.1|T44379 7642 Lambda-PRL2 Arabidopsis thaliana cD... 52 8e-005
emb|AX651684.1| Sequence 507 from Patent WO03000898 52 8e-005
gb|AC006921.6| Arabidopsis thaliana chromosome 2 clone F2H1... 52 8e-005
ref|NM_129192.2| Arabidopsis thaliana kinase AT2G36350 mRNA... 52 8e-005
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 52 8e-005
gb|CL475646.1|CL475646 SAIL_242_C05.v1 SAIL Collection Arab... 50 3e-004
gb|BH172499.1|BH172499 SALK_005789 Arabidopsis thaliana TDN... 46 0.005
emb|AX507823.1| Sequence 2518 from Patent WO0216655 44 0.021
gb|BT010571.1| Arabidopsis thaliana At3g27580 gene, complet... 44 0.021
dbj|D10910.1|ATHATPK Arabidopsis thaliana Atpk7 gene for se... 44 0.021
dbj|AB025626.1| Arabidopsis thaliana genomic DNA, chromosom... 44 0.021
dbj|AK175529.1| Arabidopsis thaliana mRNA for serine/threon... 44 0.021
dbj|AK176399.1| Arabidopsis thaliana mRNA for serine/threon... 44 0.021
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 44 0.021
ref|NM_113674.2| Arabidopsis thaliana ATPK7; kinase AT3G275... 44 0.021
ref|NM_001035707.1| Arabidopsis thaliana ATPK7; kinase AT3G... 44 0.021
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 44 0.021
gb|BZ762067.1|BZ762067 SALK_086127.49.60.x Arabidopsis thal... 42 0.081
gb|BH254089.1|BH254089 SALK_015986 Arabidopsis thaliana TDN... 40 0.32
gb|BZ595798.1|BZ595798 SALK_089636.35.85.x Arabidopsis thal... 40 0.32
gb|AC007071.7| Arabidopsis thaliana chromosome 2 clone T9H9... 40 0.32
gb|AC007169.8| Arabidopsis thaliana chromosome 2 clone T28P... 40 0.32
dbj|AK117892.1| Arabidopsis thaliana At2g31500 mRNA for put... 40 0.32
ref|NM_128707.2| Arabidopsis thaliana CPK24; ATP binding / ... 40 0.32
>gb|AY063923.1| Arabidopsis thaliana putative protein kinase (At4g26610) mRNA,
complete cds
Length = 1960
Score = 153 bits (77), Expect = 3e-035
Identities = 236/289 (81%)
Strand = Plus / Plus
Query: 41 ctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtccc 100
||||||| || || || ||||| ||| |||||||||||||| ||||||| |||||| |
Sbjct: 765 ctttggctagccgtaaaaagcttcttagagctcagaccgagagggagatattgcagtgtc 824
Query: 101 tggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgct 160
| ||||| || ||||| ||||| |||||| |||||| ||||| || ||||| ||||| |
Sbjct: 825 ttgaccacccttttctcccaactttgtatagtcacttcgagactgagaagttctcatgtt 884
Query: 161 tggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctggaa 220
|||||||||| ||||| |||||||| || | || || ||||| ||||| ||||| || |
Sbjct: 885 tggttatggagttctgtcctggaggtgacttgcatacccttcgacaaagacagcccggga 944
Query: 221 aatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaat 280
| |||||||| |||||||||||||| |||||||| || || || |||||| ||||||
Sbjct: 945 agcgattttcagaacaagcagcaaagttttatgtagcggaagtacttcttgcaatggaat 1004
Query: 281 acctgcatatgcttgggattatataccgtgatcttaaaccagagaatgt 329
| || ||||||||||| || |||||||| ||||| || |||||||||||
Sbjct: 1005 atcttcatatgcttggcatcatataccgcgatctaaagccagagaatgt 1053
>gb|AY091248.1| Arabidopsis thaliana putative protein kinase (At4g26610) mRNA,
complete cds
Length = 1552
Score = 153 bits (77), Expect = 3e-035
Identities = 236/289 (81%)
Strand = Plus / Plus
Query: 41 ctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtccc 100
||||||| || || || ||||| ||| |||||||||||||| ||||||| |||||| |
Sbjct: 473 ctttggctagccgtaaaaagcttcttagagctcagaccgagagggagatattgcagtgtc 532
Query: 101 tggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgct 160
| ||||| || ||||| ||||| |||||| |||||| ||||| || ||||| ||||| |
Sbjct: 533 ttgaccacccttttctcccaactttgtatagtcacttcgagactgagaagttctcatgtt 592
Query: 161 tggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctggaa 220
|||||||||| ||||| |||||||| || | || || ||||| ||||| ||||| || |
Sbjct: 593 tggttatggagttctgtcctggaggtgacttgcatacccttcgacaaagacagcccggga 652
Query: 221 aatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaat 280
| |||||||| |||||||||||||| |||||||| || || || |||||| ||||||
Sbjct: 653 agcgattttcagaacaagcagcaaagttttatgtagcggaagtacttcttgcaatggaat 712
Query: 281 acctgcatatgcttgggattatataccgtgatcttaaaccagagaatgt 329
| || ||||||||||| || |||||||| ||||| || |||||||||||
Sbjct: 713 atcttcatatgcttggcatcatataccgcgatctaaagccagagaatgt 761
>ref|NM_118795.2| Arabidopsis thaliana kinase AT4G26610 mRNA, complete cds
Length = 1943
Score = 153 bits (77), Expect = 3e-035
Identities = 236/289 (81%)
Strand = Plus / Plus
Query: 41 ctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtccc 100
||||||| || || || ||||| ||| |||||||||||||| ||||||| |||||| |
Sbjct: 765 ctttggctagccgtaaaaagcttcttagagctcagaccgagagggagatattgcagtgtc 824
Query: 101 tggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgct 160
| ||||| || ||||| ||||| |||||| |||||| ||||| || ||||| ||||| |
Sbjct: 825 ttgaccacccttttctcccaactttgtatagtcacttcgagactgagaagttctcatgtt 884
Query: 161 tggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctggaa 220
|||||||||| ||||| |||||||| || | || || ||||| ||||| ||||| || |
Sbjct: 885 tggttatggagttctgtcctggaggtgacttgcatacccttcgacaaagacagcccggga 944
Query: 221 aatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaat 280
| |||||||| |||||||||||||| |||||||| || || || |||||| ||||||
Sbjct: 945 agcgattttcagaacaagcagcaaagttttatgtagcggaagtacttcttgcaatggaat 1004
Query: 281 acctgcatatgcttgggattatataccgtgatcttaaaccagagaatgt 329
| || ||||||||||| || |||||||| ||||| || |||||||||||
Sbjct: 1005 atcttcatatgcttggcatcatataccgcgatctaaagccagagaatgt 1053
>gb|AY054227.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA, complete cds
Length = 2143
Score = 111 bits (56), Expect = 1e-022
Identities = 188/232 (81%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||||||| |||||||||||||| ||||| || | || ||||| |||||||| || |
Sbjct: 832 gttactttgctatgaaggttatggacaagacatcccttgccagtcgcaagaagcttctcc 891
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || ||||| |||| ||||||||||| || ||||| |
Sbjct: 892 gagctcagactgaaagagagattctccagtctttggatcatccatttctccctaccctct 951
Query: 128 atactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagggg 187
| |||||||||||||| || || || |||||| |||| ||||||||||| || ||||| |
Sbjct: 952 acactcactttgagactgagaaattctcatgcctggtgatggaattctgtcccggaggag 1011
Query: 188 atcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagc 239
|| | || ||||| | ||| | ||||| || ||| ||||||| ||||||||
Sbjct: 1012 atttgcatactctcaggcaacgccagccggggaaacatttttctgagcaagc 1063
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 274 ttggaatacctgcatatgcttgggattatataccgtgatcttaa 317
|||||||||||||| |||||||||||| | || || ||||||||
Sbjct: 1098 ttggaatacctgcacatgcttgggattgtgtatcgagatcttaa 1141
>gb|AY062501.1| Arabidopsis thaliana protein kinase 5 (MCA23.7) mRNA, complete cds
Length = 2251
Score = 111 bits (56), Expect = 1e-022
Identities = 188/232 (81%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||||||| |||||||||||||| ||||| || | || ||||| |||||||| || |
Sbjct: 890 gttactttgctatgaaggttatggacaagacatcccttgccagtcgcaagaagcttctcc 949
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || ||||| |||| ||||||||||| || ||||| |
Sbjct: 950 gagctcagactgaaagagagattctccagtctttggatcatccatttctccctaccctct 1009
Query: 128 atactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagggg 187
| |||||||||||||| || || || |||||| |||| ||||||||||| || ||||| |
Sbjct: 1010 acactcactttgagactgagaaattctcatgcctggtgatggaattctgtcccggaggag 1069
Query: 188 atcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagc 239
|| | || ||||| | ||| | ||||| || ||| ||||||| ||||||||
Sbjct: 1070 atttgcatactctcaggcaacgccagccggggaaacatttttctgagcaagc 1121
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 274 ttggaatacctgcatatgcttgggattatataccgtgatcttaa 317
|||||||||||||| |||||||||||| | || || ||||||||
Sbjct: 1156 ttggaatacctgcacatgcttgggattgtgtatcgagatcttaa 1199
>gb|AY093303.1| Arabidopsis thaliana protein kinase 5 (MCA23.7) mRNA, complete cds
Length = 1855
Score = 111 bits (56), Expect = 1e-022
Identities = 188/232 (81%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||||||| |||||||||||||| ||||| || | || ||||| |||||||| || |
Sbjct: 644 gttactttgctatgaaggttatggacaagacatcccttgccagtcgcaagaagcttctcc 703
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || ||||| |||| ||||||||||| || ||||| |
Sbjct: 704 gagctcagactgaaagagagattctccagtctttggatcatccatttctccctaccctct 763
Query: 128 atactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagggg 187
| |||||||||||||| || || || |||||| |||| ||||||||||| || ||||| |
Sbjct: 764 acactcactttgagactgagaaattctcatgcctggtgatggaattctgtcccggaggag 823
Query: 188 atcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagc 239
|| | || ||||| | ||| | ||||| || ||| ||||||| ||||||||
Sbjct: 824 atttgcatactctcaggcaacgccagccggggaaacatttttctgagcaagc 875
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 274 ttggaatacctgcatatgcttgggattatataccgtgatcttaa 317
|||||||||||||| |||||||||||| | || || ||||||||
Sbjct: 910 ttggaatacctgcacatgcttgggattgtgtatcgagatcttaa 953
>gb|AY113177.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA, complete cds
Length = 1761
Score = 111 bits (56), Expect = 1e-022
Identities = 188/232 (81%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||||||| |||||||||||||| ||||| || | || ||||| |||||||| || |
Sbjct: 644 gttactttgctatgaaggttatggacaagacatcccttgccagtcgcaagaagcttctcc 703
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || ||||| |||| ||||||||||| || ||||| |
Sbjct: 704 gagctcagactgaaagagagattctccagtctttggatcatccatttctccctaccctct 763
Query: 128 atactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagggg 187
| |||||||||||||| || || || |||||| |||| ||||||||||| || ||||| |
Sbjct: 764 acactcactttgagactgagaaattctcatgcctggtgatggaattctgtcccggaggag 823
Query: 188 atcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagc 239
|| | || ||||| | ||| | ||||| || ||| ||||||| ||||||||
Sbjct: 824 atttgcatactctcaggcaacgccagccggggaaacatttttctgagcaagc 875
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 274 ttggaatacctgcatatgcttgggattatataccgtgatcttaa 317
|||||||||||||| |||||||||||| | || || ||||||||
Sbjct: 910 ttggaatacctgcacatgcttgggattgtgtatcgagatcttaa 953
>dbj|D10909.1|ATHPK5 Arabidopsis thaliana gene for serine/threonine protein kinase,
complete cds
Length = 4059
Score = 111 bits (56), Expect = 1e-022
Identities = 188/232 (81%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||||||| |||||||||||||| ||||| || | || ||||| |||||||| || |
Sbjct: 2676 gttactttgctatgaaggttatggacaagacatcccttgccagtcgcaagaagcttctcc 2735
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || ||||| |||| ||||||||||| || ||||| |
Sbjct: 2736 gagctcagactgaaagagagattctccagtctttggatcatccatttctccctaccctct 2795
Query: 128 atactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagggg 187
| |||||||||||||| || || || |||||| |||| ||||||||||| || ||||| |
Sbjct: 2796 acactcactttgagactgagaaattctcatgcctggtgatggaattctgtcccggaggag 2855
Query: 188 atcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagc 239
|| | || ||||| | ||| | ||||| || ||| ||||||| ||||||||
Sbjct: 2856 atttgcatactctcaggcaacgccagccggggaaacatttttctgagcaagc 2907
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 274 ttggaatacctgcatatgcttgggattatataccgtgatcttaa 317
|||||||||||||| |||||||||||| | || || ||||||||
Sbjct: 3099 ttggaatacctgcacatgcttgggattgtgtatcgagatcttaa 3142
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23
Length = 82503
Score = 111 bits (56), Expect = 1e-022
Identities = 188/232 (81%)
Strand = Plus / Minus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||||||| |||||||||||||| ||||| || | || ||||| |||||||| || |
Sbjct: 18454 gttactttgctatgaaggttatggacaagacatcccttgccagtcgcaagaagcttctcc 18395
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || ||||| |||| ||||||||||| || ||||| |
Sbjct: 18394 gagctcagactgaaagagagattctccagtctttggatcatccatttctccctaccctct 18335
Query: 128 atactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagggg 187
| |||||||||||||| || || || |||||| |||| ||||||||||| || ||||| |
Sbjct: 18334 acactcactttgagactgagaaattctcatgcctggtgatggaattctgtcccggaggag 18275
Query: 188 atcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagc 239
|| | || ||||| | ||| | ||||| || ||| ||||||| ||||||||
Sbjct: 18274 atttgcatactctcaggcaacgccagccggggaaacatttttctgagcaagc 18223
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 274 ttggaatacctgcatatgcttgggattatataccgtgatcttaa 317
|||||||||||||| |||||||||||| | || || ||||||||
Sbjct: 18031 ttggaatacctgcacatgcttgggattgtgtatcgagatcttaa 17988
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 111 bits (56), Expect = 1e-022
Identities = 188/232 (81%)
Strand = Plus / Minus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||||||| |||||||||||||| ||||| || | || ||||| |||||||| || |
Sbjct: 17481348 gttactttgctatgaaggttatggacaagacatcccttgccagtcgcaagaagcttctcc 17481289
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || ||||| |||| ||||||||||| || ||||| |
Sbjct: 17481288 gagctcagactgaaagagagattctccagtctttggatcatccatttctccctaccctct 17481229
Query: 128 atactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagggg 187
| |||||||||||||| || || || |||||| |||| ||||||||||| || ||||| |
Sbjct: 17481228 acactcactttgagactgagaaattctcatgcctggtgatggaattctgtcccggaggag 17481169
Query: 188 atcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagc 239
|| | || ||||| | ||| | ||||| || ||| ||||||| ||||||||
Sbjct: 17481168 atttgcatactctcaggcaacgccagccggggaaacatttttctgagcaagc 17481117
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 246 gttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatata 305
||||||||| || |||||||| ||||||||||| || |||||||||| ||| | |||||
Sbjct: 929488 gttctatgtcgcggaggtgcttcttgcattggagtatttgcatatgctcggggtaatata 929547
Query: 306 ccg 308
|||
Sbjct: 929548 ccg 929550
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 274 ttggaatacctgcatatgcttgggattatataccgtgatcttaa 317
|||||||||||||| |||||||||||| | || || ||||||||
Sbjct: 17480925 ttggaatacctgcacatgcttgggattgtgtatcgagatcttaa 17480882
>ref|NM_124149.2| Arabidopsis thaliana kinase AT5G47750 mRNA, complete cds
Length = 2272
Score = 111 bits (56), Expect = 1e-022
Identities = 188/232 (81%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||||||| |||||||||||||| ||||| || | || ||||| |||||||| || |
Sbjct: 911 gttactttgctatgaaggttatggacaagacatcccttgccagtcgcaagaagcttctcc 970
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || ||||| |||| ||||||||||| || ||||| |
Sbjct: 971 gagctcagactgaaagagagattctccagtctttggatcatccatttctccctaccctct 1030
Query: 128 atactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagggg 187
| |||||||||||||| || || || |||||| |||| ||||||||||| || ||||| |
Sbjct: 1031 acactcactttgagactgagaaattctcatgcctggtgatggaattctgtcccggaggag 1090
Query: 188 atcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagc 239
|| | || ||||| | ||| | ||||| || ||| ||||||| ||||||||
Sbjct: 1091 atttgcatactctcaggcaacgccagccggggaaacatttttctgagcaagc 1142
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 274 ttggaatacctgcatatgcttgggattatataccgtgatcttaa 317
|||||||||||||| |||||||||||| | || || ||||||||
Sbjct: 1177 ttggaatacctgcacatgcttgggattgtgtatcgagatcttaa 1220
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 111 bits (56), Expect = 1e-022
Identities = 188/232 (81%)
Strand = Plus / Minus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||||||| |||||||||||||| ||||| || | || ||||| |||||||| || |
Sbjct: 19358447 gttactttgctatgaaggttatggacaagacatcccttgccagtcgcaagaagcttctcc 19358388
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || ||||| |||| ||||||||||| || ||||| |
Sbjct: 19358387 gagctcagactgaaagagagattctccagtctttggatcatccatttctccctaccctct 19358328
Query: 128 atactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagggg 187
| |||||||||||||| || || || |||||| |||| ||||||||||| || ||||| |
Sbjct: 19358327 acactcactttgagactgagaaattctcatgcctggtgatggaattctgtcccggaggag 19358268
Query: 188 atcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagc 239
|| | || ||||| | ||| | ||||| || ||| ||||||| ||||||||
Sbjct: 19358267 atttgcatactctcaggcaacgccagccggggaaacatttttctgagcaagc 19358216
Score = 54.0 bits (27), Expect = 2e-005
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagct 62
|||| ||||| ||||||||||||||||| ||| ||||||| || ||||| |||||
Sbjct: 22658463 gttattttgcgatgaaggttatggataaaactgctttggctagccggaaaaagct 22658409
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 246 gttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatata 305
||||||||| || |||||||| ||||||||||| || |||||||||| ||| | |||||
Sbjct: 929931 gttctatgtcgcggaggtgcttcttgcattggagtatttgcatatgctcggggtaatata 929990
Query: 306 ccg 308
|||
Sbjct: 929991 ccg 929993
Score = 50.1 bits (25), Expect = 3e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 262 gtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaacca 321
||||| |||||| ||||||| | || ||||||||||| || ||||||||||| |||||
Sbjct: 22658126 gtgcttcttgcaatggaatatttacacatgcttgggatcatttaccgtgatctgaaaccc 22658067
Query: 322 gagaa 326
|||||
Sbjct: 22658066 gagaa 22658062
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 274 ttggaatacctgcatatgcttgggattatataccgtgatcttaa 317
|||||||||||||| |||||||||||| | || || ||||||||
Sbjct: 19358024 ttggaatacctgcacatgcttgggattgtgtatcgagatcttaa 19357981
>emb|AL086152.1|CNS00QQY Arabidopsis thaliana genome survey sequence T7 end of BAC F12A23 of
IGF library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 336
Score = 95.6 bits (48), Expect = 6e-018
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||||||| |||||||||||||| ||||| || | || ||||| |||||||| || |
Sbjct: 164 gttactttgctatgaaggttatggacaagacatcccttgccagtcgcaagaagcttctcc 105
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || ||||| |||| ||||||||||| || ||||| |
Sbjct: 104 gagctcagactgaaagagagattctccagtctttggatcatccatttctccctaccctct 45
Query: 128 atactcactttgagacagacaagttttcatgcttggttatggaa 171
| |||||||||||||| || || || |||||| |||| ||||||
Sbjct: 44 acactcactttgagactgagaaattctcatgcctggtgatggaa 1
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 93.7 bits (47), Expect = 2e-017
Identities = 167/207 (80%)
Strand = Plus / Plus
Query: 41 ctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtccc 100
||||||| || || || ||||| ||| |||||||||||||| ||||||| |||||| |
Sbjct: 9338814 ctttggctagccgtaaaaagcttcttagagctcagaccgagagggagatattgcagtgtc 9338873
Query: 101 tggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgct 160
| ||||| || ||||| ||||| |||||| |||||| ||||| || ||||| ||||| |
Sbjct: 9338874 ttgaccacccttttctcccaactttgtatagtcacttcgagactgagaagttctcatgtt 9338933
Query: 161 tggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctggaa 220
|||||||||| ||||| |||||||| || | || || ||||| ||||| ||||| || |
Sbjct: 9338934 tggttatggagttctgtcctggaggtgacttgcatacccttcgacaaagacagcccggga 9338993
Query: 221 aatatttttcagagcaagcagcaaagt 247
| |||||||| |||||||||||||
Sbjct: 9338994 agcgattttcagaacaagcagcaaagt 9339020
Score = 63.9 bits (32), Expect = 2e-008
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 250 tatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgt 309
|||||||| || || || |||||| ||||||| || ||||||||||| || ||||||||
Sbjct: 9339123 tatgtagcggaagtacttcttgcaatggaatatcttcatatgcttggcatcatataccgc 9339182
Query: 310 gatcttaaaccagagaatgt 329
||||| || |||||||||||
Sbjct: 9339183 gatctaaagccagagaatgt 9339202
>emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome 4, BAC clone T15N24 (ESSA project)
Length = 92657
Score = 93.7 bits (47), Expect = 2e-017
Identities = 167/207 (80%)
Strand = Plus / Plus
Query: 41 ctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtccc 100
||||||| || || || ||||| ||| |||||||||||||| ||||||| |||||| |
Sbjct: 55083 ctttggctagccgtaaaaagcttcttagagctcagaccgagagggagatattgcagtgtc 55142
Query: 101 tggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgct 160
| ||||| || ||||| ||||| |||||| |||||| ||||| || ||||| ||||| |
Sbjct: 55143 ttgaccacccttttctcccaactttgtatagtcacttcgagactgagaagttctcatgtt 55202
Query: 161 tggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctggaa 220
|||||||||| ||||| |||||||| || | || || ||||| ||||| ||||| || |
Sbjct: 55203 tggttatggagttctgtcctggaggtgacttgcatacccttcgacaaagacagcccggga 55262
Query: 221 aatatttttcagagcaagcagcaaagt 247
| |||||||| |||||||||||||
Sbjct: 55263 agcgattttcagaacaagcagcaaagt 55289
Score = 63.9 bits (32), Expect = 2e-008
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 250 tatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgt 309
|||||||| || || || |||||| ||||||| || ||||||||||| || ||||||||
Sbjct: 55392 tatgtagcggaagtacttcttgcaatggaatatcttcatatgcttggcatcatataccgc 55451
Query: 310 gatcttaaaccagagaatgt 329
||||| || |||||||||||
Sbjct: 55452 gatctaaagccagagaatgt 55471
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
Length = 198320
Score = 93.7 bits (47), Expect = 2e-017
Identities = 167/207 (80%)
Strand = Plus / Plus
Query: 41 ctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtccc 100
||||||| || || || ||||| ||| |||||||||||||| ||||||| |||||| |
Sbjct: 123215 ctttggctagccgtaaaaagcttcttagagctcagaccgagagggagatattgcagtgtc 123274
Query: 101 tggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgct 160
| ||||| || ||||| ||||| |||||| |||||| ||||| || ||||| ||||| |
Sbjct: 123275 ttgaccacccttttctcccaactttgtatagtcacttcgagactgagaagttctcatgtt 123334
Query: 161 tggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctggaa 220
|||||||||| ||||| |||||||| || | || || ||||| ||||| ||||| || |
Sbjct: 123335 tggttatggagttctgtcctggaggtgacttgcatacccttcgacaaagacagcccggga 123394
Query: 221 aatatttttcagagcaagcagcaaagt 247
| |||||||| |||||||||||||
Sbjct: 123395 agcgattttcagaacaagcagcaaagt 123421
Score = 63.9 bits (32), Expect = 2e-008
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 250 tatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgt 309
|||||||| || || || |||||| ||||||| || ||||||||||| || ||||||||
Sbjct: 123524 tatgtagcggaagtacttcttgcaatggaatatcttcatatgcttggcatcatataccgc 123583
Query: 310 gatcttaaaccagagaatgt 329
||||| || |||||||||||
Sbjct: 123584 gatctaaagccagagaatgt 123603
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 93.7 bits (47), Expect = 2e-017
Identities = 167/207 (80%)
Strand = Plus / Plus
Query: 41 ctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtccc 100
||||||| || || || ||||| ||| |||||||||||||| ||||||| |||||| |
Sbjct: 13426046 ctttggctagccgtaaaaagcttcttagagctcagaccgagagggagatattgcagtgtc 13426105
Query: 101 tggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgct 160
| ||||| || ||||| ||||| |||||| |||||| ||||| || ||||| ||||| |
Sbjct: 13426106 ttgaccacccttttctcccaactttgtatagtcacttcgagactgagaagttctcatgtt 13426165
Query: 161 tggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctggaa 220
|||||||||| ||||| |||||||| || | || || ||||| ||||| ||||| || |
Sbjct: 13426166 tggttatggagttctgtcctggaggtgacttgcatacccttcgacaaagacagcccggga 13426225
Query: 221 aatatttttcagagcaagcagcaaagt 247
| |||||||| |||||||||||||
Sbjct: 13426226 agcgattttcagaacaagcagcaaagt 13426252
Score = 63.9 bits (32), Expect = 2e-008
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 250 tatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgt 309
|||||||| || || || |||||| ||||||| || ||||||||||| || ||||||||
Sbjct: 13426355 tatgtagcggaagtacttcttgcaatggaatatcttcatatgcttggcatcatataccgc 13426414
Query: 310 gatcttaaaccagagaatgt 329
||||| || |||||||||||
Sbjct: 13426415 gatctaaagccagagaatgt 13426434
>gb|B24591.1|B24591 F20P20TF IGF Arabidopsis thaliana genomic clone F20P20, DNA
sequence
Length = 424
Score = 87.7 bits (44), Expect = 2e-015
Identities = 113/136 (83%)
Strand = Plus / Minus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||||||| |||||||||||||| ||||| || | || ||||| |||||||| || |
Sbjct: 151 gttactttgctatgaaggttatggacaagacatcccttgccagtcgcaagaagcttctcc 92
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || ||||| |||| ||||||||||| || ||||| |
Sbjct: 91 gagctcagactgaaagagagattctccagtctttggatcatccatttctccctaccctct 32
Query: 128 atactcactttgagac 143
| ||||||||||||||
Sbjct: 31 acactcactttgagac 16
>gb|BG459176.1|BG459176 M64E21STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600034583R1 5', mRNA sequence
Length = 248
Score = 85.7 bits (43), Expect = 6e-015
Identities = 154/191 (80%)
Strand = Plus / Plus
Query: 49 agtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccat 108
||||| |||||||| || ||||||||||| || | ||||| || ||||| |||| |||
Sbjct: 18 agtcgcaagaagcttctccgagctcagactgaaagagagattctccagtctttggatcat 77
Query: 109 ccatttctaccaaccctgtatactcactttgagacagacaagttttcatgcttggttatg 168
|||||||| || ||||| || |||||||||||||| || || || |||||| |||| |||
Sbjct: 78 ccatttctccctaccctctacactcactttgagactgagaaattctcatgcctggtgatg 137
Query: 169 gaattctgccctggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttt 228
|||||||| || ||||| ||| | || ||||| | ||| | ||||| || ||| |||||
Sbjct: 138 gaattctgtcccggaggagatttgcatactctcaggcaacgccagccggggaaacatttt 197
Query: 229 tcagagcaagc 239
|| ||||||||
Sbjct: 198 tctgagcaagc 208
>gb|BE524982.1|BE524982 M57B3STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M57B3 5', mRNA sequence
Length = 351
Score = 69.9 bits (35), Expect = 4e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 232 gagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatg 291
||||||||||| ||||| ||||| || || ||||| |||||| ||||||| | || |||
Sbjct: 144 gagcaagcagctaagttttatgtcgcggaagtgcttcttgcaatggaatatttacacatg 203
Query: 292 cttgggattatataccgtgatcttaaaccagagaa 326
|||||||| || ||||||||||| ||||| |||||
Sbjct: 204 cttgggatcatttaccgtgatctgaaacccgagaa 238
>emb|AX506135.1| Sequence 830 from Patent WO0216655
Length = 1497
Score = 69.9 bits (35), Expect = 4e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 232 gagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatg 291
||||||||||| ||||| ||||| || || ||||| |||||| ||||||| | || |||
Sbjct: 622 gagcaagcagctaagttttatgtcgcggaagtgcttcttgcaatggaatatttacacatg 681
Query: 292 cttgggattatataccgtgatcttaaaccagagaa 326
|||||||| || ||||||||||| ||||| |||||
Sbjct: 682 cttgggatcatttaccgtgatctgaaacccgagaa 716
Score = 54.0 bits (27), Expect = 2e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagct 62
|||| ||||| ||||||||||||||||| ||| ||||||| || ||||| |||||
Sbjct: 398 gttattttgcgatgaaggttatggataaaactgctttggctagccggaaaaagct 452
>dbj|D10937.1|ATHATPK64 Arabidopsis thaliana ATPK64 mRNA for protein kinase, complete cds
Length = 1737
Score = 69.9 bits (35), Expect = 4e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 232 gagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatg 291
||||||||||| ||||| ||||| || || ||||| |||||| ||||||| | || |||
Sbjct: 657 gagcaagcagctaagttttatgtcgcggaagtgcttcttgcaatggaatatttacacatg 716
Query: 292 cttgggattatataccgtgatcttaaaccagagaa 326
|||||||| || ||||||||||| ||||| |||||
Sbjct: 717 cttgggatcatttaccgtgatctgaaacccgagaa 751
Score = 54.0 bits (27), Expect = 2e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagct 62
|||| ||||| ||||||||||||||||| ||| ||||||| || ||||| |||||
Sbjct: 433 gttattttgcgatgaaggttatggataaaactgctttggctagccggaaaaagct 487
>ref|NM_124973.3| Arabidopsis thaliana kinase AT5G55910 mRNA, complete cds
Length = 2013
Score = 69.9 bits (35), Expect = 4e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 232 gagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatg 291
||||||||||| ||||| ||||| || || ||||| |||||| ||||||| | || |||
Sbjct: 927 gagcaagcagctaagttttatgtcgcggaagtgcttcttgcaatggaatatttacacatg 986
Query: 292 cttgggattatataccgtgatcttaaaccagagaa 326
|||||||| || ||||||||||| ||||| |||||
Sbjct: 987 cttgggatcatttaccgtgatctgaaacccgagaa 1021
Score = 54.0 bits (27), Expect = 2e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagct 62
|||| ||||| ||||||||||||||||| ||| ||||||| || ||||| |||||
Sbjct: 703 gttattttgcgatgaaggttatggataaaactgctttggctagccggaaaaagct 757
>gb|R87024.1|R87024 16220 Lambda-PRL2 Arabidopsis thaliana cDNA clone 122F21T7, mRNA
sequence
Length = 354
Score = 63.9 bits (32), Expect = 2e-008
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 232 gagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatg 291
||||||||||| ||||| |||||||| || || || |||||| ||||||| | || |||
Sbjct: 89 gagcaagcagctaagttttatgtagcggaagtncttcttgcaatggaatatttacacatg 148
Query: 292 cttgggattatataccgtgatcttaaaccagagaa 326
||||| || || ||||||||||| ||||| |||||
Sbjct: 149 cttggaatcatttaccgtgatctgaaacccgagaa 183
>ref|NM_120445.1| Arabidopsis thaliana kinase AT5G03640 mRNA, complete cds
Length = 2781
Score = 58.0 bits (29), Expect = 1e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 232 gagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatg 291
|||| |||||| | ||||||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 1918 gagccagcagctaggttctatgtcgcggaggtgcttcttgcattggagtatttgcatatg 1977
Query: 292 cttgggattatataccg 308
|| ||| | ||||||||
Sbjct: 1978 ctcggggtaatataccg 1994
>gb|B18482.1|B18482 F12A23-T7 IGF Arabidopsis thaliana genomic clone F12A23, DNA
sequence
Length = 884
Score = 56.0 bits (28), Expect = 5e-006
Identities = 108/136 (79%)
Strand = Plus / Minus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgcttc 67
|||||| ||| |||||||||||||| ||||| || | || ||||| |||||| | | |
Sbjct: 232 gttactntgctatgaaggttatggacaagacatcccttgccagtcgcaagaagattatcc 173
Query: 68 gagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgt 127
|||||||||| || | ||||| || |||| |||| ||||||||||| | ||||| |
Sbjct: 172 gagctcagactgaaagagagattctccagtatntggatcatccatttctccntaccctnt 113
Query: 128 atactcactttgagac 143
| ||||||||||||||
Sbjct: 112 acactcactttgagac 97
>gb|AV556469.1|AV556469 AV556469 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ044b01F 3', mRNA sequence
Length = 582
Score = 54.0 bits (27), Expect = 2e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagct 62
|||| ||||| ||||||||||||||||| ||| ||||||| || ||||| |||||
Sbjct: 528 gttattttgcgatgaaggttatggataaaactgctttggctagccggaaaaagct 582
>gb|AV561719.1|AV561719 AV561719 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ156d09F 3', mRNA sequence
Length = 627
Score = 54.0 bits (27), Expect = 2e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagct 62
|||| ||||| ||||||||||||||||| ||| ||||||| || ||||| |||||
Sbjct: 528 gttattttgcgatgaaggttatggataaaactgctttggctagccggaaaaagct 582
>dbj|AB026659.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYN21
Length = 28207
Score = 54.0 bits (27), Expect = 2e-005
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagct 62
|||| ||||| ||||||||||||||||| ||| ||||||| || ||||| |||||
Sbjct: 3764 gttattttgcgatgaaggttatggataaaactgctttggctagccggaaaaagct 3710
Score = 50.1 bits (25), Expect = 3e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 262 gtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaacca 321
||||| |||||| ||||||| | || ||||||||||| || ||||||||||| |||||
Sbjct: 3427 gtgcttcttgcaatggaatatttacacatgcttgggatcatttaccgtgatctgaaaccc 3368
Query: 322 gagaa 326
|||||
Sbjct: 3367 gagaa 3363
>emb|AL162506.1|ATF17C15 Arabidopsis thaliana DNA chromosome 5, BAC clone F17C15 (ESSA project)
Length = 102897
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 246 gttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatata 305
||||||||| || |||||||| ||||||||||| || |||||||||| ||| | |||||
Sbjct: 25191 gttctatgtcgcggaggtgcttcttgcattggagtatttgcatatgctcggggtaatata 25250
Query: 306 ccg 308
|||
Sbjct: 25251 ccg 25253
>gb|T44379.1|T44379 7642 Lambda-PRL2 Arabidopsis thaliana cDNA clone 124O18T7, mRNA
sequence
Length = 454
Score = 52.0 bits (26), Expect = 8e-005
Identities = 79/96 (82%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 232 gagcaagcagcaaagttctatgtagctgaggtgct-ccttgcattggaatacctgcatat 290
||||||||||| ||||| ||||| || || ||||| ||||| ||||||| | || ||
Sbjct: 22 gagcaagcagctaagttttatgtcgcggaagtgctannttgcaatggaatatttacacat 81
Query: 291 gcttgggattatataccgtgatcttaaaccagagaa 326
||||||||| || ||||||||||| ||||| |||||
Sbjct: 82 gcttgggatcatttaccgtgatctgaaacccgagaa 117
>emb|AX651684.1| Sequence 507 from Patent WO03000898
Length = 2850
Score = 52.0 bits (26), Expect = 8e-005
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 246 gttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatata 305
|||||||||||| || | |||||||| |||| ||| | || |||||||| |||||||
Sbjct: 1986 gttctatgtagcagaaatcctccttgcgctggagtacttacacatgcttggtgttatata 2045
Query: 306 ccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgct 359
||| ||| | ||||||||||| | || || || |||||||| |||||||||||
Sbjct: 2046 ccgagatttgaaaccagagaacattctagtccgagaagatggtcacatcatgct 2099
>gb|AC006921.6| Arabidopsis thaliana chromosome 2 clone F2H17 map g6825, complete
sequence
Length = 91354
Score = 52.0 bits (26), Expect = 8e-005
Identities = 92/114 (80%)
Strand = Plus / Minus
Query: 246 gttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatata 305
|||||||||||| || | |||||||| |||| ||| | || |||||||| |||||||
Sbjct: 22688 gttctatgtagcagaaatcctccttgcgctggagtacttacacatgcttggtgttatata 22629
Query: 306 ccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgct 359
||| ||| | ||||||||||| | || || || |||||||| |||||||||||
Sbjct: 22628 ccgagatttgaaaccagagaacattctagtccgagaagatggtcacatcatgct 22575
>ref|NM_129192.2| Arabidopsis thaliana kinase AT2G36350 mRNA, complete cds
Length = 3119
Score = 52.0 bits (26), Expect = 8e-005
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 246 gttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatata 305
|||||||||||| || | |||||||| |||| ||| | || |||||||| |||||||
Sbjct: 2196 gttctatgtagcagaaatcctccttgcgctggagtacttacacatgcttggtgttatata 2255
Query: 306 ccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgct 359
||| ||| | ||||||||||| | || || || |||||||| |||||||||||
Sbjct: 2256 ccgagatttgaaaccagagaacattctagtccgagaagatggtcacatcatgct 2309
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 52.0 bits (26), Expect = 8e-005
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 246 gttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatata 305
|||||||||||| || | |||||||| |||| ||| | || |||||||| |||||||
Sbjct: 15248079 gttctatgtagcagaaatcctccttgcgctggagtacttacacatgcttggtgttatata 15248138
Query: 306 ccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgct 359
||| ||| | ||||||||||| | || || || |||||||| |||||||||||
Sbjct: 15248139 ccgagatttgaaaccagagaacattctagtccgagaagatggtcacatcatgct 15248192
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 307 cgtgatcttaaaccagagaa 326
||||||||||||||||||||
Sbjct: 13421825 cgtgatcttaaaccagagaa 13421844
>gb|CL475646.1|CL475646 SAIL_242_C05.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_242_C05.v1, DNA sequence
Length = 890
Score = 50.1 bits (25), Expect = 3e-004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 8 gttactttgccatgaaggttatggataagacttctttggcaagtcggaa 56
|||| ||||| ||||||||||||||||| ||| ||||||| || |||||
Sbjct: 594 gttattttgcgatgaaggttatggataaaactgctttggctagccggaa 642
>gb|BH172499.1|BH172499 SALK_005789 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_005789, DNA sequence
Length = 437
Score = 46.1 bits (23), Expect = 0.005
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 119 caaccctgtatactcactttgagacagacaagttttcatgcttggttatggaatt 173
||||||| || |||||||||||||| || || || |||||| |||| ||||||||
Sbjct: 61 caaccctctacactcactttgagactgagaaattctcatgcctggtgatggaatt 115
>emb|AX507823.1| Sequence 2518 from Patent WO0216655
Length = 1737
Score = 44.1 bits (22), Expect = 0.021
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 286 catatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagat 345
|||||||||||||| |||||| | || ||||| || |||||||| | ||||| ||||||
Sbjct: 895 catatgcttgggatcatatacagagaccttaagcctgagaatgttttagttcgtgaagat 954
Query: 346 gg 347
||
Sbjct: 955 gg 956
>gb|BT010571.1| Arabidopsis thaliana At3g27580 gene, complete cds
Length = 1737
Score = 44.1 bits (22), Expect = 0.021
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 286 catatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagat 345
|||||||||||||| |||||| | || ||||| || |||||||| | ||||| ||||||
Sbjct: 895 catatgcttgggatcatatacagagaccttaagcctgagaatgttttagttcgtgaagat 954
Query: 346 gg 347
||
Sbjct: 955 gg 956
>dbj|D10910.1|ATHATPK Arabidopsis thaliana Atpk7 gene for serine/threonine protein kinase,
complete cds
Length = 4719
Score = 44.1 bits (22), Expect = 0.021
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 286 catatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagat 345
|||||||||||||| |||||| | || ||||| || |||||||| | ||||| ||||||
Sbjct: 2432 catatgcttgggatcatatacagagaccttaagcctgagaatgttttagttcgtgaagat 2491
Query: 346 gg 347
||
Sbjct: 2492 gg 2493
>dbj|AB025626.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MMJ24
Length = 54452
Score = 44.1 bits (22), Expect = 0.021
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 286 catatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagat 345
|||||||||||||| |||||| | || ||||| || |||||||| | ||||| ||||||
Sbjct: 47826 catatgcttgggatcatatacagagaccttaagcctgagaatgttttagttcgtgaagat 47767
Query: 346 gg 347
||
Sbjct: 47766 gg 47765
>dbj|AK175529.1| Arabidopsis thaliana mRNA for serine/threonine-protein kinase PK7,
complete cds, clone: RAFL21-94-N11
Length = 2124
Score = 44.1 bits (22), Expect = 0.021
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 286 catatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagat 345
|||||||||||||| |||||| | || ||||| || |||||||| | ||||| ||||||
Sbjct: 1080 catatgcttgggatcatatacagagaccttaagcctgagaatgttttagttcgtgaagat 1139
Query: 346 gg 347
||
Sbjct: 1140 gg 1141
>dbj|AK176399.1| Arabidopsis thaliana mRNA for serine/threonine-protein kinase, PK7,
complete cds, clone: RAFL24-11-A01
Length = 2483
Score = 44.1 bits (22), Expect = 0.021
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 286 catatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagat 345
|||||||||||||| |||||| | || ||||| || |||||||| | ||||| ||||||
Sbjct: 1387 catatgcttgggatcatatacagagaccttaagcctgagaatgttttagttcgtgaagat 1446
Query: 346 gg 347
||
Sbjct: 1447 gg 1448
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 44.1 bits (22), Expect = 0.021
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 286 catatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagat 345
|||||||||||||| |||||| | || ||||| || |||||||| | ||||| ||||||
Sbjct: 10152483 catatgcttgggatcatatacagagaccttaagcctgagaatgttttagttcgtgaagat 10152424
Query: 346 gg 347
||
Sbjct: 10152423 gg 10152422
>ref|NM_113674.2| Arabidopsis thaliana ATPK7; kinase AT3G27580 (ATPK7) transcript
variant AT3G27580.1 mRNA, complete cds
Length = 1737
Score = 44.1 bits (22), Expect = 0.021
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 286 catatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagat 345
|||||||||||||| |||||| | || ||||| || |||||||| | ||||| ||||||
Sbjct: 895 catatgcttgggatcatatacagagaccttaagcctgagaatgttttagttcgtgaagat 954
Query: 346 gg 347
||
Sbjct: 955 gg 956
>ref|NM_001035707.1| Arabidopsis thaliana ATPK7; kinase AT3G27580 (ATPK7) transcript
variant AT3G27580.2 mRNA, complete cds
Length = 2473
Score = 44.1 bits (22), Expect = 0.021
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 286 catatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagat 345
|||||||||||||| |||||| | || ||||| || |||||||| | ||||| ||||||
Sbjct: 1387 catatgcttgggatcatatacagagaccttaagcctgagaatgttttagttcgtgaagat 1446
Query: 346 gg 347
||
Sbjct: 1447 gg 1448
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 44.1 bits (22), Expect = 0.021
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 286 catatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaagat 345
|||||||||||||| |||||| | || ||||| || |||||||| | ||||| ||||||
Sbjct: 10219750 catatgcttgggatcatatacagagaccttaagcctgagaatgttttagttcgtgaagat 10219691
Query: 346 gg 347
||
Sbjct: 10219690 gg 10219689
>gb|BZ762067.1|BZ762067 SALK_086127.49.60.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_086127.49.60.x,
DNA sequence
Length = 94
Score = 42.1 bits (21), Expect = 0.081
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 107 atccatttctaccaaccctgtatactcactttgagac 143
|||||||||| || ||||| || ||||||||||||||
Sbjct: 46 atccatttctccctaccctctacactcactttgagac 10
>gb|BH254089.1|BH254089 SALK_015986 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_015986, DNA sequence
Length = 444
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 307 cgtgatcttaaaccagagaa 326
||||||||||||||||||||
Sbjct: 90 cgtgatcttaaaccagagaa 71
>gb|BZ595798.1|BZ595798 SALK_089636.35.85.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_089636.35.85.x,
DNA sequence
Length = 317
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 307 cgtgatcttaaaccagagaa 326
||||||||||||||||||||
Sbjct: 250 cgtgatcttaaaccagagaa 231
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 200,747
Number of Sequences: 1013581
Number of extensions: 200747
Number of successful extensions: 14248
Number of sequences better than 0.5: 54
Number of HSP's better than 0.5 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13177
Number of HSP's gapped (non-prelim): 1069
length of query: 457
length of database: 908,940,872
effective HSP length: 20
effective length of query: 437
effective length of database: 888,669,252
effective search space: 388348463124
effective search space used: 388348463124
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)