BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCG38e04.yg.2.1
(690 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 151 2e-034
gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthas... 151 2e-034
emb|AX412747.1| Sequence 511 from Patent WO0222675 151 2e-034
emb|AX441264.1| Sequence 18 from Patent EP1209228 151 2e-034
emb|AX508002.1| Sequence 2697 from Patent WO0216655 151 2e-034
dbj|BD181338.1| A stress-responsive promoter 151 2e-034
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 151 2e-034
gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis tha... 151 2e-034
gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D... 151 2e-034
dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for put... 151 2e-034
ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTH... 151 2e-034
ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHA... 151 2e-034
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 151 2e-034
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 151 2e-034
emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cD... 135 1e-029
emb|AX651854.1| Sequence 720 from Patent WO03000898 133 4e-029
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 133 4e-029
emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome... 133 4e-029
ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTH... 133 4e-029
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 133 4e-029
gb|CW845818.1|CW845818 GT12585.Ds3.10.21.2003.jx39.740 Arab... 121 2e-025
gb|AQ963066.1|AQ963066 LERGJ26TF LERG Arabidopsis thaliana ... 105 1e-020
gb|AQ963067.1|AQ963067 LERGJ26TR LERG Arabidopsis thaliana ... 105 1e-020
dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosom... 86 9e-015
emb|CR379747.1| Arabidopsis thaliana transposon insertion S... 86 9e-015
ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTH... 86 9e-015
gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J... 80 6e-013
gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F... 80 6e-013
tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase ... 80 6e-013
gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, ... 80 6e-013
ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synth... 80 6e-013
gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis tha... 64 3e-008
ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTH... 64 3e-008
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 56 8e-006
emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome... 56 8e-006
ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTH... 56 8e-006
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 56 8e-006
gb|CL475128.1|CL475128 SAIL_232_C06.v1 SAIL Collection Arab... 42 0.12
emb|BX288363.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.12
gb|CW834888.1|CW834888 ET1139.Ds3.06.04.99.b.435 Arabidopsi... 42 0.12
gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome II... 42 0.12
gb|BX836766.1|BX836766 BX836766 Arabidopsis thaliana Flower... 40 0.49
gb|BP832867.1|BP832867 BP832867 RAFL19 Arabidopsis thaliana... 40 0.49
gb|AY099734.1| Arabidopsis thaliana putative glucan synthas... 40 0.49
gb|BT000346.1| Arabidopsis thaliana putative glucan synthas... 40 0.49
gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, compl... 40 0.49
emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cD... 40 0.49
dbj|AK221151.1| Arabidopsis thaliana mRNA for putative gluc... 40 0.49
ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTH... 40 0.49
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 151 bits (76), Expect = 2e-034
Identities = 268/332 (80%)
Strand = Plus / Plus
Query: 115 atccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaagga 174
||||| |||| ||| || ||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct: 1648698 atccatttgttccagtctgtccagtcatcaacaatcttttgccactcaaaaccagacgga 1648757
Query: 175 ttgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatg 234
||||| ||||| || ||||||||||| || ||||||||||||| || || || |||||
Sbjct: 1648758 ttgaaaaggaaaggagcaaagagccatgtcaccaccatgaaccatatcgaaacagtgatc 1648817
Query: 235 aagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaactagtaga 294
| || ||||| | | || |||||||| |||||||| || | ||| || | ||| |||
Sbjct: 1648818 agaatataagtaaccacacccctatatgattgaccaaagatctgatataccagtagaaga 1648877
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
||||| || |||| |||||| ||||| || || |||||||| | | |||||||||||||
Sbjct: 1648878 atcataagttcaatgcccttcacaaagtgactacgggaatagaacctatagttctcagca 1648937
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatgg 414
||||| || ||||| ||||||||||| || ||||| |||| || || || ||||||||
Sbjct: 1648938 aatttcgcgtggaagaccacaaaccctcgaccagttcctctatactctgcgcctccatga 1648997
Query: 415 agtaacgtccttccgtagtagtgagtttttgt 446
| || |||||||||||||| || ||||||||
Sbjct: 1648998 aacaatgtccttccgtagtaatgtgtttttgt 1649029
Score = 63.9 bits (32), Expect = 3e-008
Identities = 95/116 (81%)
Strand = Plus / Minus
Query: 279 atacacaactagtagaatcatcagctcaaggcccttgacaaaatggctgcgggaataaag 338
||||||||||||||| || | || ||| || ||||| ||||||||||| || ||||| ||
Sbjct: 1987722 atacacaactagtagtatgaccaactccagtcccttaacaaaatggcttcgcgaatatag 1987663
Query: 339 tcgatagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctc 394
|| |||||| || ||||| || |||||||| || ||||| || || ||||| ||||
Sbjct: 1987662 tctatagttttctgcaaacttcgcatggaaaacaacaaaacctcgaccagttgctc 1987607
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1)
mRNA, complete cds
Length = 6007
Score = 151 bits (76), Expect = 2e-034
Identities = 268/332 (80%)
Strand = Plus / Minus
Query: 115 atccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaagga 174
||||| |||| ||| || ||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct: 5180 atccatttgttccagtctgtccagtcatcaacaatcttttgccactcaaaaccagacgga 5121
Query: 175 ttgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatg 234
||||| ||||| || ||||||||||| || ||||||||||||| || || || |||||
Sbjct: 5120 ttgaaaaggaaaggagcaaagagccatgtcaccaccatgaaccatatcgaaacagtgatc 5061
Query: 235 aagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaactagtaga 294
| || ||||| | | || |||||||| |||||||| || | ||| || | ||| |||
Sbjct: 5060 agaatataagtaaccacacccctatatgattgaccaaagatctgatataccagtagaaga 5001
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
||||| || |||| |||||| ||||| || || |||||||| | | |||||||||||||
Sbjct: 5000 atcataagttcaatgcccttcacaaagtgactacgggaatagaacctatagttctcagca 4941
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatgg 414
||||| || ||||| ||||||||||| || ||||| |||| || || || ||||||||
Sbjct: 4940 aatttcgcgtggaagaccacaaaccctcgaccagttcctctatactctgcgcctccatga 4881
Query: 415 agtaacgtccttccgtagtagtgagtttttgt 446
| || |||||||||||||| || ||||||||
Sbjct: 4880 aacaatgtccttccgtagtaatgtgtttttgt 4849
>emb|AX412747.1| Sequence 511 from Patent WO0222675
Length = 5577
Score = 151 bits (76), Expect = 2e-034
Identities = 268/332 (80%)
Strand = Plus / Minus
Query: 115 atccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaagga 174
||||| |||| ||| || ||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct: 4895 atccatttgttccagtctgtccagtcatcaacaatcttttgccactcaaaaccagacgga 4836
Query: 175 ttgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatg 234
||||| ||||| || ||||||||||| || ||||||||||||| || || || |||||
Sbjct: 4835 ttgaaaaggaaaggagcaaagagccatgtcaccaccatgaaccatatcgaaacagtgatc 4776
Query: 235 aagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaactagtaga 294
| || ||||| | | || |||||||| |||||||| || | ||| || | ||| |||
Sbjct: 4775 agaatataagtaaccacacccctatatgattgaccaaagatctgatataccagtagaaga 4716
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
||||| || |||| |||||| ||||| || || |||||||| | | |||||||||||||
Sbjct: 4715 atcataagttcaatgcccttcacaaagtgactacgggaatagaacctatagttctcagca 4656
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatgg 414
||||| || ||||| ||||||||||| || ||||| |||| || || || ||||||||
Sbjct: 4655 aatttcgcgtggaagaccacaaaccctcgaccagttcctctatactctgcgcctccatga 4596
Query: 415 agtaacgtccttccgtagtagtgagtttttgt 446
| || |||||||||||||| || ||||||||
Sbjct: 4595 aacaatgtccttccgtagtaatgtgtttttgt 4564
>emb|AX441264.1| Sequence 18 from Patent EP1209228
Length = 2000
Score = 151 bits (76), Expect = 2e-034
Identities = 268/332 (80%)
Strand = Plus / Minus
Query: 115 atccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaagga 174
||||| |||| ||| || ||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct: 412 atccatttgttccagtctgtccagtcatcaacaatcttttgccactcaaaaccagacgga 353
Query: 175 ttgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatg 234
||||| ||||| || ||||||||||| || ||||||||||||| || || || |||||
Sbjct: 352 ttgaaaaggaaaggagcaaagagccatgtcaccaccatgaaccatatcgaaacagtgatc 293
Query: 235 aagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaactagtaga 294
| || ||||| | | || |||||||| |||||||| || | ||| || | ||| |||
Sbjct: 292 agaatataagtaaccacacccctatatgattgaccaaagatctgatataccagtagaaga 233
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
||||| || |||| |||||| ||||| || || |||||||| | | |||||||||||||
Sbjct: 232 atcataagttcaatgcccttcacaaagtgactacgggaatagaacctatagttctcagca 173
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatgg 414
||||| || ||||| ||||||||||| || ||||| |||| || || || ||||||||
Sbjct: 172 aatttcgcgtggaagaccacaaaccctcgaccagttcctctatactctgcgcctccatga 113
Query: 415 agtaacgtccttccgtagtagtgagtttttgt 446
| || |||||||||||||| || ||||||||
Sbjct: 112 aacaatgtccttccgtagtaatgtgtttttgt 81
>emb|AX508002.1| Sequence 2697 from Patent WO0216655
Length = 5577
Score = 151 bits (76), Expect = 2e-034
Identities = 268/332 (80%)
Strand = Plus / Minus
Query: 115 atccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaagga 174
||||| |||| ||| || ||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct: 4895 atccatttgttccagtctgtccagtcatcaacaatcttttgccactcaaaaccagacgga 4836
Query: 175 ttgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatg 234
||||| ||||| || ||||||||||| || ||||||||||||| || || || |||||
Sbjct: 4835 ttgaaaaggaaaggagcaaagagccatgtcaccaccatgaaccatatcgaaacagtgatc 4776
Query: 235 aagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaactagtaga 294
| || ||||| | | || |||||||| |||||||| || | ||| || | ||| |||
Sbjct: 4775 agaatataagtaaccacacccctatatgattgaccaaagatctgatataccagtagaaga 4716
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
||||| || |||| |||||| ||||| || || |||||||| | | |||||||||||||
Sbjct: 4715 atcataagttcaatgcccttcacaaagtgactacgggaatagaacctatagttctcagca 4656
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatgg 414
||||| || ||||| ||||||||||| || ||||| |||| || || || ||||||||
Sbjct: 4655 aatttcgcgtggaagaccacaaaccctcgaccagttcctctatactctgcgcctccatga 4596
Query: 415 agtaacgtccttccgtagtagtgagtttttgt 446
| || |||||||||||||| || ||||||||
Sbjct: 4595 aacaatgtccttccgtagtaatgtgtttttgt 4564
>dbj|BD181338.1| A stress-responsive promoter
Length = 2000
Score = 151 bits (76), Expect = 2e-034
Identities = 268/332 (80%)
Strand = Plus / Minus
Query: 115 atccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaagga 174
||||| |||| ||| || ||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct: 412 atccatttgttccagtctgtccagtcatcaacaatcttttgccactcaaaaccagacgga 353
Query: 175 ttgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatg 234
||||| ||||| || ||||||||||| || ||||||||||||| || || || |||||
Sbjct: 352 ttgaaaaggaaaggagcaaagagccatgtcaccaccatgaaccatatcgaaacagtgatc 293
Query: 235 aagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaactagtaga 294
| || ||||| | | || |||||||| |||||||| || | ||| || | ||| |||
Sbjct: 292 agaatataagtaaccacacccctatatgattgaccaaagatctgatataccagtagaaga 233
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
||||| || |||| |||||| ||||| || || |||||||| | | |||||||||||||
Sbjct: 232 atcataagttcaatgcccttcacaaagtgactacgggaatagaacctatagttctcagca 173
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatgg 414
||||| || ||||| ||||||||||| || ||||| |||| || || || ||||||||
Sbjct: 172 aatttcgcgtggaagaccacaaaccctcgaccagttcctctatactctgcgcctccatga 113
Query: 415 agtaacgtccttccgtagtagtgagtttttgt 446
| || |||||||||||||| || ||||||||
Sbjct: 112 aacaatgtccttccgtagtaatgtgtttttgt 81
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
sequence
Length = 103223
Score = 151 bits (76), Expect = 2e-034
Identities = 268/332 (80%)
Strand = Plus / Plus
Query: 115 atccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaagga 174
||||| |||| ||| || ||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct: 30346 atccatttgttccagtctgtccagtcatcaacaatcttttgccactcaaaaccagacgga 30405
Query: 175 ttgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatg 234
||||| ||||| || ||||||||||| || ||||||||||||| || || || |||||
Sbjct: 30406 ttgaaaaggaaaggagcaaagagccatgtcaccaccatgaaccatatcgaaacagtgatc 30465
Query: 235 aagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaactagtaga 294
| || ||||| | | || |||||||| |||||||| || | ||| || | ||| |||
Sbjct: 30466 agaatataagtaaccacacccctatatgattgaccaaagatctgatataccagtagaaga 30525
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
||||| || |||| |||||| ||||| || || |||||||| | | |||||||||||||
Sbjct: 30526 atcataagttcaatgcccttcacaaagtgactacgggaatagaacctatagttctcagca 30585
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatgg 414
||||| || ||||| ||||||||||| || ||||| |||| || || || ||||||||
Sbjct: 30586 aatttcgcgtggaagaccacaaaccctcgaccagttcctctatactctgcgcctccatga 30645
Query: 415 agtaacgtccttccgtagtagtgagtttttgt 446
| || |||||||||||||| || ||||||||
Sbjct: 30646 aacaatgtccttccgtagtaatgtgtttttgt 30677
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
complete sequence
Length = 84203
Score = 151 bits (76), Expect = 2e-034
Identities = 268/332 (80%)
Strand = Plus / Plus
Query: 115 atccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaagga 174
||||| |||| ||| || ||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct: 80895 atccatttgttccagtctgtccagtcatcaacaatcttttgccactcaaaaccagacgga 80954
Query: 175 ttgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatg 234
||||| ||||| || ||||||||||| || ||||||||||||| || || || |||||
Sbjct: 80955 ttgaaaaggaaaggagcaaagagccatgtcaccaccatgaaccatatcgaaacagtgatc 81014
Query: 235 aagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaactagtaga 294
| || ||||| | | || |||||||| |||||||| || | ||| || | ||| |||
Sbjct: 81015 agaatataagtaaccacacccctatatgattgaccaaagatctgatataccagtagaaga 81074
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
||||| || |||| |||||| ||||| || || |||||||| | | |||||||||||||
Sbjct: 81075 atcataagttcaatgcccttcacaaagtgactacgggaatagaacctatagttctcagca 81134
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatgg 414
||||| || ||||| ||||||||||| || ||||| |||| || || || ||||||||
Sbjct: 81135 aatttcgcgtggaagaccacaaaccctcgaccagttcctctatactctgcgcctccatga 81194
Query: 415 agtaacgtccttccgtagtagtgagtttttgt 446
| || |||||||||||||| || ||||||||
Sbjct: 81195 aacaatgtccttccgtagtaatgtgtttttgt 81226
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete
sequence
Length = 103194
Score = 151 bits (76), Expect = 2e-034
Identities = 226/276 (81%)
Strand = Plus / Plus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||| ||||| ||||| || ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 90359 ccaatctgtccaatcatctacgatcttttgccactcgaaaccagagggattgaacaggaa 90418
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatgaagatgtaagt 245
|| |||||||||||||| ||||||||||||| || || || ||||| | || || ||
Sbjct: 90419 aggagcaaagagccaagtcaccaccatgaaccatatcgaaacagtgatcagaatatatgt 90478
Query: 246 tatagcccctctatatgactgaccaaatatttcatacacaactagtagaatcatcagctc 305
| | | |||||||| | || |||||||| | |||||| | || || |||||||||||
Sbjct: 90479 aacaactcctctataggcatggccaaatatctgatacactagcaggagtatcatcagctc 90538
Query: 306 aaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttggcatg 365
|| ||||| |||||||| ||||| || || | || ||||| |||||||||||||||||
Sbjct: 90539 aatacccttcacaaaatgactgcgcgagtagaatctgtagttttcagcaaatttggcatg 90598
Query: 366 gaacaccacaaacccacgtccagtggctctgtattc 401
|||||||||||| ||||| |||||| ||||||||||
Sbjct: 90599 gaacaccacaaaaccacgcccagtgcctctgtattc 90634
>dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for putative glucan synthase,
complete cds, clone: RAFL16-92-B13
Length = 2390
Score = 151 bits (76), Expect = 2e-034
Identities = 226/276 (81%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||| ||||| ||||| || ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 1577 ccaatctgtccaatcatctacgatcttttgccactcgaaaccagagggattgaacaggaa 1518
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatgaagatgtaagt 245
|| |||||||||||||| ||||||||||||| || || || ||||| | || || ||
Sbjct: 1517 aggagcaaagagccaagtcaccaccatgaaccatatcgaaacagtgatcagaatatatgt 1458
Query: 246 tatagcccctctatatgactgaccaaatatttcatacacaactagtagaatcatcagctc 305
| | | |||||||| | || |||||||| | |||||| | || || |||||||||||
Sbjct: 1457 aacaactcctctataggcatggccaaatatctgatacactagcaggagtatcatcagctc 1398
Query: 306 aaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttggcatg 365
|| ||||| |||||||| ||||| || || | || ||||| |||||||||||||||||
Sbjct: 1397 aatacccttcacaaaatgactgcgcgagtagaatctgtagttttcagcaaatttggcatg 1338
Query: 366 gaacaccacaaacccacgtccagtggctctgtattc 401
|||||||||||| ||||| |||||| ||||||||||
Sbjct: 1337 gaacaccacaaaaccacgcccagtgcctctgtattc 1302
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds
Length = 5880
Score = 151 bits (76), Expect = 2e-034
Identities = 226/276 (81%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||| ||||| ||||| || ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 5187 ccaatctgtccaatcatctacgatcttttgccactcgaaaccagagggattgaacaggaa 5128
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatgaagatgtaagt 245
|| |||||||||||||| ||||||||||||| || || || ||||| | || || ||
Sbjct: 5127 aggagcaaagagccaagtcaccaccatgaaccatatcgaaacagtgatcagaatatatgt 5068
Query: 246 tatagcccctctatatgactgaccaaatatttcatacacaactagtagaatcatcagctc 305
| | | |||||||| | || |||||||| | |||||| | || || |||||||||||
Sbjct: 5067 aacaactcctctataggcatggccaaatatctgatacactagcaggagtatcatcagctc 5008
Query: 306 aaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttggcatg 365
|| ||||| |||||||| ||||| || || | || ||||| |||||||||||||||||
Sbjct: 5007 aatacccttcacaaaatgactgcgcgagtagaatctgtagttttcagcaaatttggcatg 4948
Query: 366 gaacaccacaaacccacgtccagtggctctgtattc 401
|||||||||||| ||||| |||||| ||||||||||
Sbjct: 4947 gaacaccacaaaaccacgcccagtgcctctgtattc 4912
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase,
transferring glycosyl groups AT1G05570 (CALS1) mRNA,
complete cds
Length = 6022
Score = 151 bits (76), Expect = 2e-034
Identities = 268/332 (80%)
Strand = Plus / Minus
Query: 115 atccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaagga 174
||||| |||| ||| || ||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct: 5180 atccatttgttccagtctgtccagtcatcaacaatcttttgccactcaaaaccagacgga 5121
Query: 175 ttgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatg 234
||||| ||||| || ||||||||||| || ||||||||||||| || || || |||||
Sbjct: 5120 ttgaaaaggaaaggagcaaagagccatgtcaccaccatgaaccatatcgaaacagtgatc 5061
Query: 235 aagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaactagtaga 294
| || ||||| | | || |||||||| |||||||| || | ||| || | ||| |||
Sbjct: 5060 agaatataagtaaccacacccctatatgattgaccaaagatctgatataccagtagaaga 5001
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
||||| || |||| |||||| ||||| || || |||||||| | | |||||||||||||
Sbjct: 5000 atcataagttcaatgcccttcacaaagtgactacgggaatagaacctatagttctcagca 4941
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatgg 414
||||| || ||||| ||||||||||| || ||||| |||| || || || ||||||||
Sbjct: 4940 aatttcgcgtggaagaccacaaaccctcgaccagttcctctatactctgcgcctccatga 4881
Query: 415 agtaacgtccttccgtagtagtgagtttttgt 446
| || |||||||||||||| || ||||||||
Sbjct: 4880 aacaatgtccttccgtagtaatgtgtttttgt 4849
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 151 bits (76), Expect = 2e-034
Identities = 226/276 (81%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||| ||||| ||||| || ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 13606128 ccaatctgtccaatcatctacgatcttttgccactcgaaaccagagggattgaacaggaa 13606069
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatgaagatgtaagt 245
|| |||||||||||||| ||||||||||||| || || || ||||| | || || ||
Sbjct: 13606068 aggagcaaagagccaagtcaccaccatgaaccatatcgaaacagtgatcagaatatatgt 13606009
Query: 246 tatagcccctctatatgactgaccaaatatttcatacacaactagtagaatcatcagctc 305
| | | |||||||| | || |||||||| | |||||| | || || |||||||||||
Sbjct: 13606008 aacaactcctctataggcatggccaaatatctgatacactagcaggagtatcatcagctc 13605949
Query: 306 aaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttggcatg 365
|| ||||| |||||||| ||||| || || | || ||||| |||||||||||||||||
Sbjct: 13605948 aatacccttcacaaaatgactgcgcgagtagaatctgtagttttcagcaaatttggcatg 13605889
Query: 366 gaacaccacaaacccacgtccagtggctctgtattc 401
|||||||||||| ||||| |||||| ||||||||||
Sbjct: 13605888 gaacaccacaaaaccacgcccagtgcctctgtattc 13605853
Score = 79.8 bits (40), Expect = 6e-013
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 57 ttcccaccatgactcccagcttttctctggtgccacaccaatacctccacgattgctgat 116
|||||||||||| ||||||||||| | || || || || |||||||| | |||| ||
Sbjct: 5712598 ttcccaccatgattcccagcttttgtttgctggtactccgatacctcctctgctgcttat 5712539
Query: 117 ccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggatt 176
|||||||| ||||||| ||||||||| || |||||||||||||| ||||| || |||||
Sbjct: 5712538 ccacttgttccaatcatcccagtcatcaactatcttctgccactcgaatcccgagggatt 5712479
Query: 177 gaacaggaatgg 188
||| | ||||||
Sbjct: 5712478 gaaaaagaatgg 5712467
Score = 42.1 bits (21), Expect = 0.12
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 454 gagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcactcaatgca 513
||||| |||||||| |||| || |||||||||||||| | || | |||| ||| ||
Sbjct: 5712201 gagaaggtgaagaagacaggcgctaactgaagctgcattatgattagatcagacaacgcc 5712142
Query: 514 gttctgaatcctctctc 530
|||||||||||||||||
Sbjct: 5712141 gttctgaatcctctctc 5712125
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 151 bits (76), Expect = 2e-034
Identities = 268/332 (80%)
Strand = Plus / Plus
Query: 115 atccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaagga 174
||||| |||| ||| || ||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct: 1648821 atccatttgttccagtctgtccagtcatcaacaatcttttgccactcaaaaccagacgga 1648880
Query: 175 ttgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatg 234
||||| ||||| || ||||||||||| || ||||||||||||| || || || |||||
Sbjct: 1648881 ttgaaaaggaaaggagcaaagagccatgtcaccaccatgaaccatatcgaaacagtgatc 1648940
Query: 235 aagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaactagtaga 294
| || ||||| | | || |||||||| |||||||| || | ||| || | ||| |||
Sbjct: 1648941 agaatataagtaaccacacccctatatgattgaccaaagatctgatataccagtagaaga 1649000
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
||||| || |||| |||||| ||||| || || |||||||| | | |||||||||||||
Sbjct: 1649001 atcataagttcaatgcccttcacaaagtgactacgggaatagaacctatagttctcagca 1649060
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatgg 414
||||| || ||||| ||||||||||| || ||||| |||| || || || ||||||||
Sbjct: 1649061 aatttcgcgtggaagaccacaaaccctcgaccagttcctctatactctgcgcctccatga 1649120
Query: 415 agtaacgtccttccgtagtagtgagtttttgt 446
| || |||||||||||||| || ||||||||
Sbjct: 1649121 aacaatgtccttccgtagtaatgtgtttttgt 1649152
Score = 63.9 bits (32), Expect = 3e-008
Identities = 95/116 (81%)
Strand = Plus / Minus
Query: 279 atacacaactagtagaatcatcagctcaaggcccttgacaaaatggctgcgggaataaag 338
||||||||||||||| || | || ||| || ||||| ||||||||||| || ||||| ||
Sbjct: 1987875 atacacaactagtagtatgaccaactccagtcccttaacaaaatggcttcgcgaatatag 1987816
Query: 339 tcgatagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctc 394
|| |||||| || ||||| || |||||||| || ||||| || || ||||| ||||
Sbjct: 1987815 tctatagttttctgcaaacttcgcatggaaaacaacaaaacctcgaccagttgctc 1987760
>emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB52ZD04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1385
Score = 135 bits (68), Expect = 1e-029
Identities = 224/276 (81%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||| ||||| ||||| || ||||| ||| |||| || ||||| ||||||||||||||
Sbjct: 623 ccaatctgtccaatcatctacgatcttttgcaactcgaaaccagagggattgaacaggaa 564
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgatgaagatgtaagt 245
|| |||||||||||||| ||||||||||||| || || || ||||| | || || ||
Sbjct: 563 aggagcaaagagccaagtcaccaccatgaaccatatcgaaacagtgatcagaatatatgt 504
Query: 246 tatagcccctctatatgactgaccaaatatttcatacacaactagtagaatcatcagctc 305
| | | |||||||| | || |||||||| | |||||| | || || |||||||||||
Sbjct: 503 aacaactcctctataggcatggccaaatatctaatacactagcaggagtatcatcagctc 444
Query: 306 aaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttggcatg 365
|| ||||| |||||||| ||||| || || | || ||||| ||||||| |||||||||
Sbjct: 443 aatacccttcacaaaatgactgcgcgagtagaatctgtagttttcagcaattttggcatg 384
Query: 366 gaacaccacaaacccacgtccagtggctctgtattc 401
|||||||||||| ||||| |||||| ||||||||||
Sbjct: 383 gaacaccacaaaaccacgcccagtgcctctgtattc 348
>emb|AX651854.1| Sequence 720 from Patent WO03000898
Length = 5892
Score = 133 bits (67), Expect = 4e-029
Identities = 226/279 (81%)
Strand = Plus / Minus
Query: 267 accaaatatttcatacacaactagtagaatcatcagctcaaggcccttgacaaaatggct 326
||||||||||| ||||||||| ||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 5169 accaaatatttgatacacaacgagtagcagcatcatttcaagtcccttcacaaaatggct 5110
Query: 327 gcgggaataaagtcgatagttctcagcaaatttggcatggaacaccacaaacccacgtcc 386
|||||||| |||| || || ||||||||||||||||| || || ||||| || | |||
Sbjct: 5109 ccgggaatacagtctgtaattatcagcaaatttggcatgaaagacgacaaatcctcttcc 5050
Query: 387 agtggctctgtattccgctcctccatggagtaacgtccttccgtagtagtgagtttttgt 446
|||| ||||| | || || ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 5049 tgtggacctgtacttggcaccgccatgaagtaacgtcctcccatagtagtgagtctttgt 4990
Query: 447 tcccaacgagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcact 506
|| | ||||| || ||||| || | |||||||||||||||||||| | ||| |||||
Sbjct: 4989 cccaagagagaacgtaaagaacactggcgccaactgaagctgcatcagcacaaattcact 4930
Query: 507 caatgcagttctgaatcctctctccaaaccgatttccat 545
||| ||||| || || || ||||| || || ||||||||
Sbjct: 4929 caaggcagtcctaaaacccctctctaatccaatttccat 4891
Score = 111 bits (56), Expect = 2e-022
Identities = 95/108 (87%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 5310 ccaatcagtccaatcatcaacaatcttctgccattcaaaaccagaaggattgaagaggaa 5251
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgat 233
|| ||||| ||||| || || |||||||||||||| |||| ||||||
Sbjct: 5250 gggagcaaaaagccaggtcccgaccatgaaccacatagatatggtgat 5203
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 133 bits (67), Expect = 4e-029
Identities = 226/279 (81%)
Strand = Plus / Plus
Query: 267 accaaatatttcatacacaactagtagaatcatcagctcaaggcccttgacaaaatggct 326
||||||||||| ||||||||| ||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 3924517 accaaatatttgatacacaacgagtagcagcatcatttcaagtcccttcacaaaatggct 3924576
Query: 327 gcgggaataaagtcgatagttctcagcaaatttggcatggaacaccacaaacccacgtcc 386
|||||||| |||| || || ||||||||||||||||| || || ||||| || | |||
Sbjct: 3924577 ccgggaatacagtctgtaattatcagcaaatttggcatgaaagacgacaaatcctcttcc 3924636
Query: 387 agtggctctgtattccgctcctccatggagtaacgtccttccgtagtagtgagtttttgt 446
|||| ||||| | || || ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 3924637 tgtggacctgtacttggcaccgccatgaagtaacgtcctcccatagtagtgagtctttgt 3924696
Query: 447 tcccaacgagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcact 506
|| | ||||| || ||||| || | |||||||||||||||||||| | ||| |||||
Sbjct: 3924697 cccaagagagaacgtaaagaacactggcgccaactgaagctgcatcagcacaaattcact 3924756
Query: 507 caatgcagttctgaatcctctctccaaaccgatttccat 545
||| ||||| || || || ||||| || || ||||||||
Sbjct: 3924757 caaggcagtcctaaaacccctctctaatccaatttccat 3924795
Score = 111 bits (56), Expect = 2e-022
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 3924376 ccaatcagtccaatcatcaacaatcttctgccattcaaaaccagaaggattgaagaggaa 3924435
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgat 233
|| ||||| ||||| || || |||||||||||||| |||| ||||||
Sbjct: 3924436 gggagcaaaaagccaggtcccgaccatgaaccacatagatatggtgat 3924483
Score = 85.7 bits (43), Expect = 9e-015
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 343 tagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctctgtattcc 402
||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 13466021 tagttttcagcaaatttggcatggaacaccacaaatccacggccagtacctctgtattct 13465962
Query: 403 gctcctccatg 413
|| ||||||||
Sbjct: 13465961 gcgcctccatg 13465951
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 154 tgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatg 213
||||||||||| ||||| || ||||| | ||| || ||||||||||| || |||||||||
Sbjct: 13466195 tgccactcaaaaccagatgggttgaataagaaaggagcaaagagccatgtacccaccatg 13466136
Query: 214 aacca 218
|||||
Sbjct: 13466135 aacca 13466131
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 58 tcccaccatgactcccagcttttctctgg 86
||||||||||| |||||||| ||||||||
Sbjct: 13466294 tcccaccatgattcccagctcttctctgg 13466266
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
Length = 90020
Score = 133 bits (67), Expect = 4e-029
Identities = 226/279 (81%)
Strand = Plus / Plus
Query: 267 accaaatatttcatacacaactagtagaatcatcagctcaaggcccttgacaaaatggct 326
||||||||||| ||||||||| ||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 63358 accaaatatttgatacacaacgagtagcagcatcatttcaagtcccttcacaaaatggct 63417
Query: 327 gcgggaataaagtcgatagttctcagcaaatttggcatggaacaccacaaacccacgtcc 386
|||||||| |||| || || ||||||||||||||||| || || ||||| || | |||
Sbjct: 63418 ccgggaatacagtctgtaattatcagcaaatttggcatgaaagacgacaaatcctcttcc 63477
Query: 387 agtggctctgtattccgctcctccatggagtaacgtccttccgtagtagtgagtttttgt 446
|||| ||||| | || || ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 63478 tgtggacctgtacttggcaccgccatgaagtaacgtcctcccatagtagtgagtctttgt 63537
Query: 447 tcccaacgagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcact 506
|| | ||||| || ||||| || | |||||||||||||||||||| | ||| |||||
Sbjct: 63538 cccaagagagaacgtaaagaacactggcgccaactgaagctgcatcagcacaaattcact 63597
Query: 507 caatgcagttctgaatcctctctccaaaccgatttccat 545
||| ||||| || || || ||||| || || ||||||||
Sbjct: 63598 caaggcagtcctaaaacccctctctaatccaatttccat 63636
Score = 111 bits (56), Expect = 2e-022
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 63217 ccaatcagtccaatcatcaacaatcttctgccattcaaaaccagaaggattgaagaggaa 63276
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgat 233
|| ||||| ||||| || || |||||||||||||| |||| ||||||
Sbjct: 63277 gggagcaaaaagccaggtcccgaccatgaaccacatagatatggtgat 63324
>ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTHASE-LIKE 12);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT5G13000 (ATGSL12) mRNA, complete cds
Length = 6194
Score = 133 bits (67), Expect = 4e-029
Identities = 226/279 (81%)
Strand = Plus / Minus
Query: 267 accaaatatttcatacacaactagtagaatcatcagctcaaggcccttgacaaaatggct 326
||||||||||| ||||||||| ||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 5311 accaaatatttgatacacaacgagtagcagcatcatttcaagtcccttcacaaaatggct 5252
Query: 327 gcgggaataaagtcgatagttctcagcaaatttggcatggaacaccacaaacccacgtcc 386
|||||||| |||| || || ||||||||||||||||| || || ||||| || | |||
Sbjct: 5251 ccgggaatacagtctgtaattatcagcaaatttggcatgaaagacgacaaatcctcttcc 5192
Query: 387 agtggctctgtattccgctcctccatggagtaacgtccttccgtagtagtgagtttttgt 446
|||| ||||| | || || ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 5191 tgtggacctgtacttggcaccgccatgaagtaacgtcctcccatagtagtgagtctttgt 5132
Query: 447 tcccaacgagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcact 506
|| | ||||| || ||||| || | |||||||||||||||||||| | ||| |||||
Sbjct: 5131 cccaagagagaacgtaaagaacactggcgccaactgaagctgcatcagcacaaattcact 5072
Query: 507 caatgcagttctgaatcctctctccaaaccgatttccat 545
||| ||||| || || || ||||| || || ||||||||
Sbjct: 5071 caaggcagtcctaaaacccctctctaatccaatttccat 5033
Score = 111 bits (56), Expect = 2e-022
Identities = 95/108 (87%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 5452 ccaatcagtccaatcatcaacaatcttctgccattcaaaaccagaaggattgaagaggaa 5393
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgat 233
|| ||||| ||||| || || |||||||||||||| |||| ||||||
Sbjct: 5392 gggagcaaaaagccaggtcccgaccatgaaccacatagatatggtgat 5345
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 133 bits (67), Expect = 4e-029
Identities = 226/279 (81%)
Strand = Plus / Plus
Query: 267 accaaatatttcatacacaactagtagaatcatcagctcaaggcccttgacaaaatggct 326
||||||||||| ||||||||| ||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 4111544 accaaatatttgatacacaacgagtagcagcatcatttcaagtcccttcacaaaatggct 4111603
Query: 327 gcgggaataaagtcgatagttctcagcaaatttggcatggaacaccacaaacccacgtcc 386
|||||||| |||| || || ||||||||||||||||| || || ||||| || | |||
Sbjct: 4111604 ccgggaatacagtctgtaattatcagcaaatttggcatgaaagacgacaaatcctcttcc 4111663
Query: 387 agtggctctgtattccgctcctccatggagtaacgtccttccgtagtagtgagtttttgt 446
|||| ||||| | || || ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 4111664 tgtggacctgtacttggcaccgccatgaagtaacgtcctcccatagtagtgagtctttgt 4111723
Query: 447 tcccaacgagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcact 506
|| | ||||| || ||||| || | |||||||||||||||||||| | ||| |||||
Sbjct: 4111724 cccaagagagaacgtaaagaacactggcgccaactgaagctgcatcagcacaaattcact 4111783
Query: 507 caatgcagttctgaatcctctctccaaaccgatttccat 545
||| ||||| || || || ||||| || || ||||||||
Sbjct: 4111784 caaggcagtcctaaaacccctctctaatccaatttccat 4111822
Score = 111 bits (56), Expect = 2e-022
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 4111403 ccaatcagtccaatcatcaacaatcttctgccattcaaaaccagaaggattgaagaggaa 4111462
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggatacggtgat 233
|| ||||| ||||| || || |||||||||||||| |||| ||||||
Sbjct: 4111463 gggagcaaaaagccaggtcccgaccatgaaccacatagatatggtgat 4111510
Score = 85.7 bits (43), Expect = 9e-015
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 343 tagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctctgtattcc 402
||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 14549876 tagttttcagcaaatttggcatggaacaccacaaatccacggccagtacctctgtattct 14549817
Query: 403 gctcctccatg 413
|| ||||||||
Sbjct: 14549816 gcgcctccatg 14549806
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 154 tgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatg 213
||||||||||| ||||| || ||||| | ||| || ||||||||||| || |||||||||
Sbjct: 14550050 tgccactcaaaaccagatgggttgaataagaaaggagcaaagagccatgtacccaccatg 14549991
Query: 214 aacca 218
|||||
Sbjct: 14549990 aacca 14549986
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 58 tcccaccatgactcccagcttttctctgg 86
||||||||||| |||||||| ||||||||
Sbjct: 14550149 tcccaccatgattcccagctcttctctgg 14550121
>gb|CW845818.1|CW845818 GT12585.Ds3.10.21.2003.jx39.740 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT12585, DNA sequence
Length = 740
Score = 121 bits (61), Expect = 2e-025
Identities = 202/249 (81%)
Strand = Plus / Minus
Query: 267 accaaatatttcatacacaactagtagaatcatcagctcaaggcccttgacaaaatggct 326
||||||||||| |||||| || ||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 692 accaaatatttgatacactacgagtagcagcatcatttcaagtcccttcacaaaatggct 633
Query: 327 gcgggaataaagtcgatagttctcagcaaatttggcatggaacaccacaaacccacgtcc 386
|||||||| |||| || || ||||||||||||||||| || || ||||| || | |||
Sbjct: 632 ccgggaatacagtctgtaattatcagcaaatttggcatgaaagacgacaaatcctcttcc 573
Query: 387 agtggctctgtattccgctcctccatggagtaacgtccttccgtagtagtgagtttttgt 446
|||| ||||| | || || ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 572 tgtggacctgtacttggcaccgccatgaagtaacgtcctcccatagtagtgagtctttgt 513
Query: 447 tcccaacgagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcact 506
|| | ||||| || ||||| || | |||||||||||||||||||| | ||| |||||
Sbjct: 512 cccaagagagaacgtaaagaacactggcgccaactgaagctgcatcagcacaaattcact 453
Query: 507 caatgcagt 515
||| |||||
Sbjct: 452 caaggcagt 444
>gb|AQ963066.1|AQ963066 LERGJ26TF LERG Arabidopsis thaliana genomic clone LERGJ26, DNA
sequence
Length = 592
Score = 105 bits (53), Expect = 1e-020
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 485 ccaatcagtccaatcatcaacaatcttctgccattcaaaaccagaaggattgaagaggaa 544
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggata 226
|| ||||| ||||| || || |||||||||||||| ||||
Sbjct: 545 gggagcaaaaagccaggtcccgaccatgaaccacatagata 585
>gb|AQ963067.1|AQ963067 LERGJ26TR LERG Arabidopsis thaliana genomic clone LERGJ26, DNA
sequence
Length = 604
Score = 105 bits (53), Expect = 1e-020
Identities = 89/101 (88%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 108 ccaatcagtccaatcatcaacaatcttctgccattcaaaaccagaaggattgaagaggaa 49
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatggata 226
|| ||||| ||||| || || |||||||||||||| ||||
Sbjct: 48 gggagcaaaaagccaggtcccgaccatgaaccacatagata 8
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8
Length = 70098
Score = 85.7 bits (43), Expect = 9e-015
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 343 tagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctctgtattcc 402
||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 62462 tagttttcagcaaatttggcatggaacaccacaaatccacggccagtacctctgtattct 62403
Query: 403 gctcctccatg 413
|| ||||||||
Sbjct: 62402 gcgcctccatg 62392
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 154 tgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatg 213
||||||||||| ||||| || ||||| | ||| || ||||||||||| || |||||||||
Sbjct: 62636 tgccactcaaaaccagatgggttgaataagaaaggagcaaagagccatgtacccaccatg 62577
Query: 214 aacca 218
|||||
Sbjct: 62576 aacca 62572
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 58 tcccaccatgactcccagcttttctctgg 86
||||||||||| |||||||| ||||||||
Sbjct: 62735 tcccaccatgattcccagctcttctctgg 62707
>emb|CR379747.1| Arabidopsis thaliana transposon insertion STS GT_3.11877, sequence
tagged site
Length = 473
Score = 85.7 bits (43), Expect = 9e-015
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 103 ccaatcagtccaatcatcaacaatcttctgccattcaaaaccagaaggattgaagaggaa 44
Query: 186 tggtgcaaagagcca 200
|| ||||| |||||
Sbjct: 43 gggagcaaaaagcca 29
>ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTHASE-LIKE 9);
1,3-beta-glucan synthase AT5G36870 (ATGSL09) mRNA,
complete cds
Length = 5589
Score = 85.7 bits (43), Expect = 9e-015
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 343 tagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctctgtattcc 402
||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 4691 tagttttcagcaaatttggcatggaacaccacaaatccacggccagtacctctgtattct 4632
Query: 403 gctcctccatg 413
|| ||||||||
Sbjct: 4631 gcgcctccatg 4621
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 154 tgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatg 213
||||||||||| ||||| || ||||| | ||| || ||||||||||| || |||||||||
Sbjct: 4865 tgccactcaaaaccagatgggttgaataagaaaggagcaaagagccatgtacccaccatg 4806
Query: 214 aacca 218
|||||
Sbjct: 4805 aacca 4801
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 58 tcccaccatgactcccagcttttctctgg 86
||||||||||| |||||||| ||||||||
Sbjct: 4964 tcccaccatgattcccagctcttctctgg 4936
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
sequence
Length = 104009
Score = 79.8 bits (40), Expect = 6e-013
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 57 ttcccaccatgactcccagcttttctctggtgccacaccaatacctccacgattgctgat 116
|||||||||||| ||||||||||| | || || || || |||||||| | |||| ||
Sbjct: 13741 ttcccaccatgattcccagcttttgtttgctggtactccgatacctcctctgctgcttat 13682
Query: 117 ccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggatt 176
|||||||| ||||||| ||||||||| || |||||||||||||| ||||| || |||||
Sbjct: 13681 ccacttgttccaatcatcccagtcatcaactatcttctgccactcgaatcccgagggatt 13622
Query: 177 gaacaggaatgg 188
||| | ||||||
Sbjct: 13621 gaaaaagaatgg 13610
Score = 42.1 bits (21), Expect = 0.12
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 454 gagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcactcaatgca 513
||||| |||||||| |||| || |||||||||||||| | || | |||| ||| ||
Sbjct: 13344 gagaaggtgaagaagacaggcgctaactgaagctgcattatgattagatcagacaacgcc 13285
Query: 514 gttctgaatcctctctc 530
|||||||||||||||||
Sbjct: 13284 gttctgaatcctctctc 13268
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete
sequence
Length = 102585
Score = 79.8 bits (40), Expect = 6e-013
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 57 ttcccaccatgactcccagcttttctctggtgccacaccaatacctccacgattgctgat 116
|||||||||||| ||||||||||| | || || || || |||||||| | |||| ||
Sbjct: 95943 ttcccaccatgattcccagcttttgtttgctggtactccgatacctcctctgctgcttat 95884
Query: 117 ccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggatt 176
|||||||| ||||||| ||||||||| || |||||||||||||| ||||| || |||||
Sbjct: 95883 ccacttgttccaatcatcccagtcatcaactatcttctgccactcgaatcccgagggatt 95824
Query: 177 gaacaggaatgg 188
||| | ||||||
Sbjct: 95823 gaaaaagaatgg 95812
Score = 42.1 bits (21), Expect = 0.12
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 454 gagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcactcaatgca 513
||||| |||||||| |||| || |||||||||||||| | || | |||| ||| ||
Sbjct: 95546 gagaaggtgaagaagacaggcgctaactgaagctgcattatgattagatcagacaacgcc 95487
Query: 514 gttctgaatcctctctc 530
|||||||||||||||||
Sbjct: 95486 gttctgaatcctctctc 95470
>tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds
Length = 5772
Score = 79.8 bits (40), Expect = 6e-013
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 57 ttcccaccatgactcccagcttttctctggtgccacaccaatacctccacgattgctgat 116
|||||||||||| ||||||||||| | || || || || |||||||| | |||| ||
Sbjct: 5154 ttcccaccatgattcccagcttttgtttgctggtactccgatacctcctctgctgcttat 5095
Query: 117 ccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggatt 176
|||||||| ||||||| ||||||||| || |||||||||||||| ||||| || |||||
Sbjct: 5094 ccacttgttccaatcatcccagtcatcaactatcttctgccactcgaatcccgagggatt 5035
Query: 177 gaacaggaatgg 188
||| | ||||||
Sbjct: 5034 gaaaaagaatgg 5023
Score = 42.1 bits (21), Expect = 0.12
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 454 gagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcactcaatgca 513
||||| |||||||| |||| || |||||||||||||| | || | |||| ||| ||
Sbjct: 4757 gagaaggtgaagaagacaggcgctaactgaagctgcattatgattagatcagacaacgcc 4698
Query: 514 gttctgaatcctctctc 530
|||||||||||||||||
Sbjct: 4697 gttctgaatcctctctc 4681
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds
Length = 5950
Score = 79.8 bits (40), Expect = 6e-013
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 57 ttcccaccatgactcccagcttttctctggtgccacaccaatacctccacgattgctgat 116
|||||||||||| ||||||||||| | || || || || |||||||| | |||| ||
Sbjct: 5307 ttcccaccatgattcccagcttttgtttgctggtactccgatacctcctctgctgcttat 5248
Query: 117 ccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggatt 176
|||||||| ||||||| ||||||||| || |||||||||||||| ||||| || |||||
Sbjct: 5247 ccacttgttccaatcatcccagtcatcaactatcttctgccactcgaatcccgagggatt 5188
Query: 177 gaacaggaatgg 188
||| | ||||||
Sbjct: 5187 gaaaaagaatgg 5176
Score = 42.1 bits (21), Expect = 0.12
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 454 gagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcactcaatgca 513
||||| |||||||| |||| || |||||||||||||| | || | |||| ||| ||
Sbjct: 4910 gagaaggtgaagaagacaggcgctaactgaagctgcattatgattagatcagacaacgcc 4851
Query: 514 gttctgaatcctctctc 530
|||||||||||||||||
Sbjct: 4850 gttctgaatcctctctc 4834
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA,
complete cds
Length = 5772
Score = 79.8 bits (40), Expect = 6e-013
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 57 ttcccaccatgactcccagcttttctctggtgccacaccaatacctccacgattgctgat 116
|||||||||||| ||||||||||| | || || || || |||||||| | |||| ||
Sbjct: 5154 ttcccaccatgattcccagcttttgtttgctggtactccgatacctcctctgctgcttat 5095
Query: 117 ccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggatt 176
|||||||| ||||||| ||||||||| || |||||||||||||| ||||| || |||||
Sbjct: 5094 ccacttgttccaatcatcccagtcatcaactatcttctgccactcgaatcccgagggatt 5035
Query: 177 gaacaggaatgg 188
||| | ||||||
Sbjct: 5034 gaaaaagaatgg 5023
Score = 42.1 bits (21), Expect = 0.12
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 454 gagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcactcaatgca 513
||||| |||||||| |||| || |||||||||||||| | || | |||| ||| ||
Sbjct: 4757 gagaaggtgaagaagacaggcgctaactgaagctgcattatgattagatcagacaacgcc 4698
Query: 514 gttctgaatcctctctc 530
|||||||||||||||||
Sbjct: 4697 gttctgaatcctctctc 4681
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
complete sequence
Length = 93724
Score = 63.9 bits (32), Expect = 3e-008
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 279 atacacaactagtagaatcatcagctcaaggcccttgacaaaatggctgcgggaataaag 338
||||||||||||||| || | || ||| || ||||| ||||||||||| || ||||| ||
Sbjct: 66134 atacacaactagtagtatgaccaactccagtcccttaacaaaatggcttcgcgaatatag 66193
Query: 339 tcgatagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctc 394
|| |||||| || ||||| || |||||||| || ||||| || || ||||| ||||
Sbjct: 66194 tctatagttttctgcaaacttcgcatggaaaacaacaaaacctcgaccagttgctc 66249
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds
Length = 5802
Score = 63.9 bits (32), Expect = 3e-008
Identities = 95/116 (81%)
Strand = Plus / Minus
Query: 279 atacacaactagtagaatcatcagctcaaggcccttgacaaaatggctgcgggaataaag 338
||||||||||||||| || | || ||| || ||||| ||||||||||| || ||||| ||
Sbjct: 4962 atacacaactagtagtatgaccaactccagtcccttaacaaaatggcttcgcgaatatag 4903
Query: 339 tcgatagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctc 394
|| |||||| || ||||| || |||||||| || ||||| || || ||||| ||||
Sbjct: 4902 tctatagttttctgcaaacttcgcatggaaaacaacaaaacctcgaccagttgctc 4847
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 56.0 bits (28), Expect = 8e-006
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| || || || |||| ||||||||||| || ||||||||||| | ||
Sbjct: 21811446 ccaatcagtccaatcgtcaactgtcttttgccactcaaaccccgaaggattgaatataaa 21811387
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacat 221
||||||||| | ||||| || ||||| ||||||||
Sbjct: 21811386 tggtgcaaacaaccaagaaccaaccataaaccacat 21811351
Score = 50.1 bits (25), Expect = 5e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 343 tagttctcagcaaatttggcatggaacaccacaaacccacg 383
|||||||| ||||| ||||||||||| || |||||||||||
Sbjct: 21811229 tagttctccgcaaacttggcatggaaaacaacaaacccacg 21811189
Score = 42.1 bits (21), Expect = 0.12
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 150 cttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaag 202
|||||||||||||||||| | ||| ||||| ||| | || ||||| |||||||
Sbjct: 2300113 cttctgccactcaaatccggcagggttgaataggtacggagcaaacagccaag 2300061
Score = 40.1 bits (20), Expect = 0.49
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 313 ttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttg 360
||||||||||| || | ||||||||| || ||||| |||| |||||||
Sbjct: 2299838 ttgacaaaatgacttctggaataaagacggtagttttcagaaaatttg 2299791
>emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome 3, BAC clone F17J16
Length = 89517
Score = 56.0 bits (28), Expect = 8e-006
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| || || || |||| ||||||||||| || ||||||||||| | ||
Sbjct: 66132 ccaatcagtccaatcgtcaactgtcttttgccactcaaaccccgaaggattgaatataaa 66073
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacat 221
||||||||| | ||||| || ||||| ||||||||
Sbjct: 66072 tggtgcaaacaaccaagaaccaaccataaaccacat 66037
Score = 50.1 bits (25), Expect = 5e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 343 tagttctcagcaaatttggcatggaacaccacaaacccacg 383
|||||||| ||||| ||||||||||| || |||||||||||
Sbjct: 65915 tagttctccgcaaacttggcatggaaaacaacaaacccacg 65875
>ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTHASE-LIKE 11);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G59100 (ATGSL11) mRNA, complete cds
Length = 5805
Score = 56.0 bits (28), Expect = 8e-006
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| || || || |||| ||||||||||| || ||||||||||| | ||
Sbjct: 5118 ccaatcagtccaatcgtcaactgtcttttgccactcaaaccccgaaggattgaatataaa 5059
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacat 221
||||||||| | ||||| || ||||| ||||||||
Sbjct: 5058 tggtgcaaacaaccaagaaccaaccataaaccacat 5023
Score = 50.1 bits (25), Expect = 5e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 343 tagttctcagcaaatttggcatggaacaccacaaacccacg 383
|||||||| ||||| ||||||||||| || |||||||||||
Sbjct: 4901 tagttctccgcaaacttggcatggaaaacaacaaacccacg 4861
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 56.0 bits (28), Expect = 8e-006
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||||||||| || || || |||| ||||||||||| || ||||||||||| | ||
Sbjct: 21863878 ccaatcagtccaatcgtcaactgtcttttgccactcaaaccccgaaggattgaatataaa 21863819
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacat 221
||||||||| | ||||| || ||||| ||||||||
Sbjct: 21863818 tggtgcaaacaaccaagaaccaaccataaaccacat 21863783
Score = 50.1 bits (25), Expect = 5e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 343 tagttctcagcaaatttggcatggaacaccacaaacccacg 383
|||||||| ||||| ||||||||||| || |||||||||||
Sbjct: 21863661 tagttctccgcaaacttggcatggaaaacaacaaacccacg 21863621
Score = 42.1 bits (21), Expect = 0.12
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 150 cttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaag 202
|||||||||||||||||| | ||| ||||| ||| | || ||||| |||||||
Sbjct: 2266311 cttctgccactcaaatccggcagggttgaataggtacggagcaaacagccaag 2266363
Score = 40.1 bits (20), Expect = 0.49
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 313 ttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttg 360
||||||||||| || | ||||||||| || ||||| |||| |||||||
Sbjct: 2266586 ttgacaaaatgacttctggaataaagacggtagttttcagaaaatttg 2266633
>gb|CL475128.1|CL475128 SAIL_232_C06.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_232_C06.v1, DNA sequence
Length = 913
Score = 42.1 bits (21), Expect = 0.12
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 279 atacacaactagtagaatcatcagctcaaggcccttgacaaaatggctgcgggaataaag 338
||||||||||||||| || || ||| || ||||| ||||||||||| || ||||| ||
Sbjct: 133 atacacaactagtagtatggccaactccagtcccttaacaaaatggcttcgcgaatatag 74
Query: 339 tcgatagtt 347
|| ||||||
Sbjct: 73 tctatagtt 65
>emb|BX288363.1| Arabidopsis thaliana T-DNA flanking sequence GK-412F04-018001,
genomic survey sequence
Length = 125
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 190 gcaaagagccaagtgcccaccatgaacca 218
||||||||||| || ||||||||||||||
Sbjct: 9 gcaaagagccatgtacccaccatgaacca 37
>gb|CW834888.1|CW834888 ET1139.Ds3.06.04.99.b.435 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
ET1139, DNA sequence
Length = 435
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 351 agcaaatttggcatggaacac 371
|||||||||||||||||||||
Sbjct: 163 agcaaatttggcatggaacac 143
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete
sequence
Length = 99128
Score = 42.1 bits (21), Expect = 0.12
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 150 cttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaag 202
|||||||||||||||||| | ||| ||||| ||| | || ||||| |||||||
Sbjct: 68478 cttctgccactcaaatccggcagggttgaataggtacggagcaaacagccaag 68426
Score = 40.1 bits (20), Expect = 0.49
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 313 ttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttg 360
||||||||||| || | ||||||||| || ||||| |||| |||||||
Sbjct: 68203 ttgacaaaatgacttctggaataaagacggtagttttcagaaaatttg 68156
>gb|BX836766.1|BX836766 BX836766 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB52ZE04 3PRIM, mRNA sequence
Length = 1060
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 154 tgccactcaaatccagaaggattgaacaggaa 185
||||||||||| ||||| |||||||| |||||
Sbjct: 868 tgccactcaaaaccagacggattgaaaaggaa 899
>gb|BP832867.1|BP832867 BP832867 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-94-A16 5',
mRNA sequence
Length = 386
Score = 40.1 bits (20), Expect = 0.49
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 151 ttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaag 202
||||||||||||||||| | ||| ||||| ||| | || ||||| |||||||
Sbjct: 229 ttctgccactcaaatccggcagggttgaataggtacggagcaaacagccaag 178
>gb|AY099734.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1780
Score = 40.1 bits (20), Expect = 0.49
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 151 ttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaag 202
||||||||||||||||| | ||| ||||| ||| | || ||||| |||||||
Sbjct: 888 ttctgccactcaaatccggcagggttgaataggtacggagcaaacagccaag 837
Score = 40.1 bits (20), Expect = 0.49
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 313 ttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttg 360
||||||||||| || | ||||||||| || ||||| |||| |||||||
Sbjct: 726 ttgacaaaatgacttctggaataaagacggtagttttcagaaaatttg 679
>gb|BT000346.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1404
Score = 40.1 bits (20), Expect = 0.49
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 151 ttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaag 202
||||||||||||||||| | ||| ||||| ||| | || ||||| |||||||
Sbjct: 617 ttctgccactcaaatccggcagggttgaataggtacggagcaaacagccaag 566
Score = 40.1 bits (20), Expect = 0.49
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 313 ttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttg 360
||||||||||| || | ||||||||| || ||||| |||| |||||||
Sbjct: 455 ttgacaaaatgacttctggaataaagacggtagttttcagaaaatttg 408
>gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, complete sequence
Length = 1267
Score = 40.1 bits (20), Expect = 0.49
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 151 ttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaag 202
||||||||||||||||| | ||| ||||| ||| | || ||||| |||||||
Sbjct: 388 ttctgccactcaaatccggcagggttgaataggtacggagcaaacagccaag 337
Score = 40.1 bits (20), Expect = 0.49
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 313 ttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttg 360
||||||||||| || | ||||||||| || ||||| |||| |||||||
Sbjct: 226 ttgacaaaatgacttctggaataaagacggtagttttcagaaaatttg 179
>emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL71ZB05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1053
Score = 40.1 bits (20), Expect = 0.49
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 151 ttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaag 202
||||||||||||||||| | ||| ||||| ||| | || ||||| |||||||
Sbjct: 190 ttctgccactcaaatccggcagggttgaataggtacggagcaaacagccaag 139
>dbj|AK221151.1| Arabidopsis thaliana mRNA for putative glucan synthase, complete
cds, clone: RAFL22-94-A16
Length = 1088
Score = 40.1 bits (20), Expect = 0.49
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 151 ttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaag 202
||||||||||||||||| | ||| ||||| ||| | || ||||| |||||||
Sbjct: 232 ttctgccactcaaatccggcagggttgaataggtacggagcaaacagccaag 181
Score = 40.1 bits (20), Expect = 0.49
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 313 ttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttg 360
||||||||||| || | ||||||||| || ||||| |||| |||||||
Sbjct: 70 ttgacaaaatgacttctggaataaagacggtagttttcagaaaatttg 23
>ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTHASE-LIKE 10);
1,3-beta-glucan synthase AT3G07160 (ATGSL10) mRNA,
complete cds
Length = 5981
Score = 40.1 bits (20), Expect = 0.49
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 151 ttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaag 202
||||||||||||||||| | ||| ||||| ||| | || ||||| |||||||
Sbjct: 5102 ttctgccactcaaatccggcagggttgaataggtacggagcaaacagccaag 5051
Score = 40.1 bits (20), Expect = 0.49
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 313 ttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttg 360
||||||||||| || | ||||||||| || ||||| |||| |||||||
Sbjct: 4940 ttgacaaaatgacttctggaataaagacggtagttttcagaaaatttg 4893
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 302,844
Number of Sequences: 1013581
Number of extensions: 302844
Number of successful extensions: 23181
Number of sequences better than 0.5: 49
Number of HSP's better than 0.5 without gapping: 53
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 21615
Number of HSP's gapped (non-prelim): 1543
length of query: 690
length of database: 908,940,872
effective HSP length: 20
effective length of query: 670
effective length of database: 888,669,252
effective search space: 595408398840
effective search space used: 595408398840
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)