BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBJ7h03.xg.2.1
(487 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 42 0.087
gb|AY059790.1| Arabidopsis thaliana At1g01770 mRNA sequence 42 0.087
gb|AC009273.2|T1N6 Sequence of BAC T1N6 from Arabidopsis th... 42 0.087
ref|NM_100061.2| Arabidopsis thaliana zinc ion binding AT1G... 42 0.087
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 42 0.087
gb|AA042167.1|AA042167 24488 CD4-13 Arabidopsis thaliana cD... 40 0.34
gb|AA042777.1|AA042777 25033 CD4-13 Arabidopsis thaliana cD... 40 0.34
gb|BE038353.1|BE038353 AA12D10 AA Arabidopsis thaliana cDNA... 40 0.34
gb|AV789436.1|AV789436 AV789436 RAFL6 Arabidopsis thaliana ... 40 0.34
gb|AV813672.1|AV813672 AV813672 RAFL9 Arabidopsis thaliana ... 40 0.34
gb|AV814356.1|AV814356 AV814356 RAFL9 Arabidopsis thaliana ... 40 0.34
gb|BU636113.1|BU636113 045F10 Infected Arabidopsis Leaf Ara... 40 0.34
gb|CB260281.1|CB260281 83-E011176-013-009-E21-T7R MPIZ-ADIS... 40 0.34
gb|AV534878.1|AV534878 AV534878 Arabidopsis thaliana flower... 40 0.34
gb|AV539402.1|AV539402 AV539402 Arabidopsis thaliana roots ... 40 0.34
gb|AV543368.1|AV543368 AV543368 Arabidopsis thaliana roots ... 40 0.34
gb|AV567179.1|AV567179 AV567179 Arabidopsis thaliana green ... 40 0.34
gb|CK120429.1|CK120429 218l07.p1 AtM1 Arabidopsis thaliana ... 40 0.34
gb|BP564751.1|BP564751 BP564751 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP565750.1|BP565750 BP565750 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP565761.1|BP565761 BP565761 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP566679.1|BP566679 BP566679 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP568267.1|BP568267 BP568267 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP570549.1|BP570549 BP570549 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP572103.1|BP572103 BP572103 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP572833.1|BP572833 BP572833 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP573010.1|BP573010 BP573010 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP577901.1|BP577901 BP577901 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP579643.1|BP579643 BP579643 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP580186.1|BP580186 BP580186 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP582469.1|BP582469 BP582469 RAFL14 Arabidopsis thaliana... 40 0.34
gb|BP586416.1|BP586416 BP586416 RAFL15 Arabidopsis thaliana... 40 0.34
gb|BP587531.1|BP587531 BP587531 RAFL15 Arabidopsis thaliana... 40 0.34
gb|BP598301.1|BP598301 BP598301 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP599366.1|BP599366 BP599366 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP603435.1|BP603435 BP603435 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP609105.1|BP609105 BP609105 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP609287.1|BP609287 BP609287 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP609836.1|BP609836 BP609836 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP611094.1|BP611094 BP611094 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP614462.1|BP614462 BP614462 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP614623.1|BP614623 BP614623 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP614837.1|BP614837 BP614837 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP615027.1|BP615027 BP615027 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP616759.1|BP616759 BP616759 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP617457.1|BP617457 BP617457 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP618952.1|BP618952 BP618952 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP620957.1|BP620957 BP620957 RAFL16 Arabidopsis thaliana... 40 0.34
gb|BP624866.1|BP624866 BP624866 RAFL17 Arabidopsis thaliana... 40 0.34
gb|BP627488.1|BP627488 BP627488 RAFL17 Arabidopsis thaliana... 40 0.34
gb|BP627677.1|BP627677 BP627677 RAFL17 Arabidopsis thaliana... 40 0.34
gb|BP629093.1|BP629093 BP629093 RAFL17 Arabidopsis thaliana... 40 0.34
gb|BP633854.1|BP633854 BP633854 RAFL17 Arabidopsis thaliana... 40 0.34
gb|BP635262.1|BP635262 BP635262 RAFL17 Arabidopsis thaliana... 40 0.34
gb|BP649953.1|BP649953 BP649953 RAFL19 Arabidopsis thaliana... 40 0.34
gb|BP650908.1|BP650908 BP650908 RAFL19 Arabidopsis thaliana... 40 0.34
gb|BP655708.1|BP655708 BP655708 RAFL19 Arabidopsis thaliana... 40 0.34
gb|BP657179.1|BP657179 BP657179 RAFL19 Arabidopsis thaliana... 40 0.34
gb|BP657284.1|BP657284 BP657284 RAFL19 Arabidopsis thaliana... 40 0.34
gb|BP663646.1|BP663646 BP663646 RAFL21 Arabidopsis thaliana... 40 0.34
gb|BP664521.1|BP664521 BP664521 RAFL21 Arabidopsis thaliana... 40 0.34
gb|BP665739.1|BP665739 BP665739 RAFL21 Arabidopsis thaliana... 40 0.34
gb|BP666079.1|BP666079 BP666079 RAFL21 Arabidopsis thaliana... 40 0.34
gb|BP666682.1|BP666682 BP666682 RAFL21 Arabidopsis thaliana... 40 0.34
gb|AF370574.1|AF370574 Arabidopsis thaliana transcription f... 40 0.34
gb|AY063924.1| Arabidopsis thaliana putative transcription ... 40 0.34
gb|AY091249.1| Arabidopsis thaliana putative transcription ... 40 0.34
gb|AY084361.1| Arabidopsis thaliana clone 105441 mRNA, comp... 40 0.34
emb|BX824310.1|CNS0A5HL Arabidopsis thaliana Full-length cD... 40 0.34
emb|BX822878.1|CNS0A5VL Arabidopsis thaliana Full-length cD... 40 0.34
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 40 0.34
emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome ... 40 0.34
ref|NM_115435.3| Arabidopsis thaliana zinc ion binding AT3G... 40 0.34
ref|NM_001035791.1| Arabidopsis thaliana zinc ion binding A... 40 0.34
ref|NM_001035792.1| Arabidopsis thaliana zinc ion binding A... 40 0.34
ref|NM_001035793.1| Arabidopsis thaliana zinc ion binding A... 40 0.34
ref|NM_148878.2| Arabidopsis thaliana zinc ion binding AT3G... 40 0.34
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 40 0.34
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 42.1 bits (21), Expect = 0.087
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 234 tgtactgcaagacccacttcgagcagctcttcaagga 270
||||||||||||| || || ||||| |||||||||||
Sbjct: 283163 tgtactgcaagactcattttgagcaactcttcaagga 283199
>gb|AY059790.1| Arabidopsis thaliana At1g01770 mRNA sequence
Length = 3229
Score = 42.1 bits (21), Expect = 0.087
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 234 tgtactgcaagacccacttcgagcagctcttcaagga 270
||||||||||||| || || ||||| |||||||||||
Sbjct: 2619 tgtactgcaagactcattttgagcaactcttcaagga 2655
>gb|AC009273.2|T1N6 Sequence of BAC T1N6 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 76175
Score = 42.1 bits (21), Expect = 0.087
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 234 tgtactgcaagacccacttcgagcagctcttcaagga 270
||||||||||||| || || ||||| |||||||||||
Sbjct: 54339 tgtactgcaagactcattttgagcaactcttcaagga 54375
>ref|NM_100061.2| Arabidopsis thaliana zinc ion binding AT1G01780 mRNA, complete cds
Length = 765
Score = 42.1 bits (21), Expect = 0.087
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 234 tgtactgcaagacccacttcgagcagctcttcaagga 270
||||||||||||| || || ||||| |||||||||||
Sbjct: 314 tgtactgcaagactcattttgagcaactcttcaagga 350
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 42.1 bits (21), Expect = 0.087
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 234 tgtactgcaagacccacttcgagcagctcttcaagga 270
||||||||||||| || || ||||| |||||||||||
Sbjct: 283163 tgtactgcaagactcattttgagcaactcttcaagga 283199
>gb|AA042167.1|AA042167 24488 CD4-13 Arabidopsis thaliana cDNA clone E3E11T7, mRNA sequence
Length = 595
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 283 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 244
>gb|AA042777.1|AA042777 25033 CD4-13 Arabidopsis thaliana cDNA clone E8G5T7, mRNA sequence
Length = 576
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 283 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 244
>gb|BE038353.1|BE038353 AA12D10 AA Arabidopsis thaliana cDNA 5' similar to transcription
factor l2, mRNA sequence
Length = 709
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 647 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 686
>gb|AV789436.1|AV789436 AV789436 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-83-K09 3',
mRNA sequence
Length = 426
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|AV813672.1|AV813672 AV813672 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-79-H20 3',
mRNA sequence
Length = 345
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 325 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 286
>gb|AV814356.1|AV814356 AV814356 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-82-K20 3',
mRNA sequence
Length = 404
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BU636113.1|BU636113 045F10 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 750
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 585 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 624
>gb|CB260281.1|CB260281 83-E011176-013-009-E21-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770E219Q 5-PRIME, mRNA sequence
Length = 588
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 204 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 243
>gb|AV534878.1|AV534878 AV534878 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB087c12F 3', mRNA sequence
Length = 335
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| |||| |||| ||||| ||||||||||
Sbjct: 300 ctgtactgcaagccccatttcgttcagcttttcaaggaga 261
>gb|AV539402.1|AV539402 AV539402 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ131c10F 3', mRNA sequence
Length = 389
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 325 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 286
>gb|AV543368.1|AV543368 AV543368 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ20a03F 3', mRNA sequence
Length = 350
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 206 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 167
>gb|AV567179.1|AV567179 AV567179 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQL08c07F 3', mRNA sequence
Length = 550
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 328 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 289
>gb|CK120429.1|CK120429 218l07.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L07218
5-PRIME, mRNA sequence
Length = 512
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 189 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 228
>gb|BP564751.1|BP564751 BP564751 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-09-C17 3',
mRNA sequence
Length = 441
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 328 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 289
>gb|BP565750.1|BP565750 BP565750 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-51-D06 3',
mRNA sequence
Length = 421
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP565761.1|BP565761 BP565761 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-51-D21 3',
mRNA sequence
Length = 409
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP566679.1|BP566679 BP566679 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-54-O07 3',
mRNA sequence
Length = 470
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 328 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 289
>gb|BP568267.1|BP568267 BP568267 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-61-H06 3',
mRNA sequence
Length = 445
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 332 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 293
>gb|BP570549.1|BP570549 BP570549 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-72-P17 3',
mRNA sequence
Length = 478
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP572103.1|BP572103 BP572103 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-78-L14 3',
mRNA sequence
Length = 440
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP572833.1|BP572833 BP572833 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-81-K08 3',
mRNA sequence
Length = 455
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP573010.1|BP573010 BP573010 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-82-H15 3',
mRNA sequence
Length = 441
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP577901.1|BP577901 BP577901 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-98-I20 3',
mRNA sequence
Length = 440
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP579643.1|BP579643 BP579643 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-23-J01 3',
mRNA sequence
Length = 490
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP580186.1|BP580186 BP580186 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-25-P19 3',
mRNA sequence
Length = 465
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 327 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 288
>gb|BP582469.1|BP582469 BP582469 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-36-G01 3',
mRNA sequence
Length = 487
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 359 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 320
>gb|BP586416.1|BP586416 BP586416 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-06-E09 3',
mRNA sequence
Length = 435
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP587531.1|BP587531 BP587531 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-42-N21 3',
mRNA sequence
Length = 423
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 350 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 311
>gb|BP598301.1|BP598301 BP598301 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-02-O15 3',
mRNA sequence
Length = 412
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP599366.1|BP599366 BP599366 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-07-A15 3',
mRNA sequence
Length = 368
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP603435.1|BP603435 BP603435 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-58-L24 3',
mRNA sequence
Length = 428
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 328 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 289
>gb|BP609105.1|BP609105 BP609105 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-80-P13 3',
mRNA sequence
Length = 422
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP609287.1|BP609287 BP609287 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-81-J15 3',
mRNA sequence
Length = 393
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP609836.1|BP609836 BP609836 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-08-O14 3',
mRNA sequence
Length = 403
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP611094.1|BP611094 BP611094 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-84-I15 3',
mRNA sequence
Length = 427
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP614462.1|BP614462 BP614462 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-97-A11 3',
mRNA sequence
Length = 407
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 328 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 289
>gb|BP614623.1|BP614623 BP614623 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-97-K14 3',
mRNA sequence
Length = 372
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP614837.1|BP614837 BP614837 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-98-O04 3',
mRNA sequence
Length = 466
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP615027.1|BP615027 BP615027 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-13-I12 3',
mRNA sequence
Length = 475
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 323 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 284
>gb|BP616759.1|BP616759 BP616759 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-21-E06 3',
mRNA sequence
Length = 451
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 346 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 307
>gb|BP617457.1|BP617457 BP617457 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-24-A15 3',
mRNA sequence
Length = 437
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 325 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 286
>gb|BP618952.1|BP618952 BP618952 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-30-G16 3',
mRNA sequence
Length = 457
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP620957.1|BP620957 BP620957 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-39-G21 3',
mRNA sequence
Length = 427
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 324 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 285
>gb|BP624866.1|BP624866 BP624866 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-41-N03 3',
mRNA sequence
Length = 419
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
>gb|BP627488.1|BP627488 BP627488 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-08-L17 3',
mRNA sequence
Length = 361
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 233 ctgtactgcaagacccacttcgagcagctcttcaaggaga 272
|||||||||||| ||| |||| ||||||||||||||||
Sbjct: 326 ctgtactgcaagcaccatttcgctcagctcttcaaggaga 287
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 95,372
Number of Sequences: 1013581
Number of extensions: 95372
Number of successful extensions: 6474
Number of sequences better than 0.5: 80
Number of HSP's better than 0.5 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6271
Number of HSP's gapped (non-prelim): 203
length of query: 487
length of database: 908,940,872
effective HSP length: 20
effective length of query: 467
effective length of database: 888,669,252
effective search space: 415008540684
effective search space used: 415008540684
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)