BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAD15f02.sg.3.2
(2357 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|BX650665.1| Arabidopsis thaliana T-DNA flanking sequenc... 74 1e-010
gb|BP809542.1|BP809542 BP809542 RAFL16 Arabidopsis thaliana... 74 1e-010
gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K2... 74 1e-010
dbj|AK176447.1| Arabidopsis thaliana mRNA for putative phos... 74 1e-010
ref|NM_127724.4| Arabidopsis thaliana transporter AT2G21520... 74 1e-010
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 74 1e-010
gb|AY037182.1| Arabidopsis thaliana AT4g39170/T22F8_70 mRNA... 56 3e-005
gb|AY133598.1| Arabidopsis thaliana AT4g39170/T22F8_70 mRNA... 56 3e-005
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 56 3e-005
emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome ... 56 3e-005
emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosom... 56 3e-005
ref|NM_120077.2| Arabidopsis thaliana phosphatidylinositol ... 56 3e-005
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 56 3e-005
gb|AY057587.1| Arabidopsis thaliana At2g21540/F2G1.19 mRNA,... 54 1e-004
dbj|AK176420.1| Arabidopsis thaliana mRNA for putative phos... 54 1e-004
ref|NM_127726.2| Arabidopsis thaliana phosphatidylinositol ... 54 1e-004
ref|NM_001036312.1| Arabidopsis thaliana phosphatidylinosit... 54 1e-004
gb|T88422.1|T88422 12118 Lambda-PRL2 Arabidopsis thaliana c... 50 0.002
gb|AF439836.1|AF439836 Arabidopsis thaliana At2g16380/F16F1... 50 0.002
gb|AC007047.7| Arabidopsis thaliana chromosome 2 clone F16F... 50 0.002
gb|AC007119.6| Arabidopsis thaliana chromosome 2 clone F2G1... 50 0.002
ref|NM_127192.1| Arabidopsis thaliana transporter AT2G16380... 50 0.002
ref|NM_127375.1| Arabidopsis thaliana transporter AT2G18180... 50 0.002
emb|AL764560.1| Arabidopsis thaliana T-DNA flanking sequenc... 48 0.007
emb|BX822701.1|CNS0A7DR Arabidopsis thaliana Full-length cD... 48 0.007
dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosom... 48 0.007
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 48 0.007
emb|AJ616026.1| Arabidopsis thaliana mRNA for can of worms ... 48 0.007
emb|AJ616027.1| Arabidopsis thaliana COW1 gene for can of w... 48 0.007
emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome ... 48 0.007
emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosom... 48 0.007
ref|NM_113396.2| Arabidopsis thaliana transporter AT3G24840... 48 0.007
ref|NM_119624.2| Arabidopsis thaliana transporter AT4G34580... 48 0.007
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 48 0.007
gb|U64965.1|U64965 ATU64965 Lambda-PRL2 (P.Kapranov) Arabid... 46 0.028
gb|CD533011.1|CD533011 29M11 Arabidopsis Leaf Senescence Li... 46 0.028
emb|BX531509.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.11
gb|AV827184.1|AV827184 AV827184 RAFL9 Arabidopsis thaliana ... 44 0.11
gb|BX841314.1|BX841314 BX841314 Arabidopsis thaliana Flower... 44 0.11
gb|AC002328.2|AC002328 Genomic sequence for Arabidopsis tha... 44 0.11
emb|BX816980.1|CNS0AASO Arabidopsis thaliana Full-length cD... 44 0.11
gb|BT021992.1| Arabidopsis thaliana At1g55690 gene, complet... 44 0.11
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 44 0.11
ref|NM_179485.1| Arabidopsis thaliana transporter AT1G55690... 44 0.11
ref|NM_104445.2| Arabidopsis thaliana transporter AT1G55690... 44 0.11
ref|NM_179484.2| Arabidopsis thaliana transporter AT1G55690... 44 0.11
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 44 0.11
gb|CD532588.1|CD532588 28A13 Arabidopsis Leaf Senescence Li... 42 0.43
gb|AY050419.1| Arabidopsis thaliana C7A10_870/C7A10_870 mRN... 42 0.43
gb|BT000834.1| Arabidopsis thaliana hosphatidylinositol/pho... 42 0.43
ref|NM_119812.2| Arabidopsis thaliana transporter AT4G36490... 42 0.43
>emb|BX650665.1| Arabidopsis thaliana T-DNA flanking sequence GK-551F03-022311,
genomic survey sequence
Length = 555
Score = 73.8 bits (37), Expect = 1e-010
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||||||||| |||||||| |||||| | ||||| |||||||||| |||||||||
Sbjct: 103 cacgatgattatcatatgatgttgaggttcttgaaagcgaggaaatttgatgttgagaaa 44
Query: 508 gctaa 512
|||||
Sbjct: 43 gctaa 39
>gb|BP809542.1|BP809542 BP809542 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-22-B10 5',
mRNA sequence
Length = 382
Score = 73.8 bits (37), Expect = 1e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||||||||| |||||||| |||||| | ||||| |||||||||| |||||||||
Sbjct: 129 cacgatgattatcatatgatgttgaggttcttgaaagcgaggaaatttgatgttgagaaa 188
Query: 508 gctaa 512
|||||
Sbjct: 189 gctaa 193
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete
sequence
Length = 125045
Score = 73.8 bits (37), Expect = 1e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||||||||| |||||||| |||||| | ||||| |||||||||| |||||||||
Sbjct: 113537 cacgatgattatcatatgatgttgaggttcttgaaagcgaggaaatttgatgttgagaaa 113596
Query: 508 gctaa 512
|||||
Sbjct: 113597 gctaa 113601
Score = 50.1 bits (25), Expect = 0.002
Identities = 130/165 (78%)
Strand = Plus / Minus
Query: 674 aagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatg 733
|||||||||| | ||||| || ||||| || ||| | ||| ||||||| || |||||||
Sbjct: 120119 aagttgatgccacaaagctgatgcaagtcactaccatcgataggtatgtcaagtaccatg 120060
Query: 734 tcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaaa 793
| | ||| ||||||||| ||| | || ||||| |||||||| |||||||||| || |
Sbjct: 120059 tgagagagtttgagaagactttcaatatcaaattaccagcttgttccattgctgccaaga 120000
Query: 794 agcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|||| || ||| | ||| || || |||||||||||||||||||
Sbjct: 119999 agcatattgatcagagcaccaccatcttggatgtgcaaggcgtgg 119955
Score = 46.1 bits (23), Expect = 0.028
Identities = 86/107 (80%)
Strand = Plus / Plus
Query: 1852 aacgcagccgtccgccgcgtggacgcgctggaagccgagctgatctccacgaagaaggcc 1911
|||||||||||| || | || ||||| || ||||| ||||| || | || || ||||||
Sbjct: 115819 aacgcagccgtctgcagagtagacgcacttgaagcagagctcatagctactaaaaaggcc 115878
Query: 1912 ctttacgatgctctgatgcgacaggatgagctgctcgcgtacattga 1958
|||||||| ||| ||||| ||||||| ||| | || || ||||||||
Sbjct: 115879 ctttacgaagctttgatgagacaggaagagttacttgcttacattga 115925
Score = 44.1 bits (22), Expect = 0.11
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
||||||||| ||||||||||| | ||||| || | ||| |||| ||||| ||||||||
Sbjct: 120427 cacgatgatcatcacatgatgctgaggtttctgagggcaaggaagtttgatcttgagaaa 120368
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaa 545
|| ||| |||||| | || |||||| ||||||||||
Sbjct: 120367 gcaaagcaaatgtggactgatatgatccattggaggaa 120330
>dbj|AK176447.1| Arabidopsis thaliana mRNA for putative
phosphatidylinositol/phosphatidylcholine transfer
protein, partial cds, clone: RAFL24-22-B10
Length = 1984
Score = 73.8 bits (37), Expect = 1e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||||||||| |||||||| |||||| | ||||| |||||||||| |||||||||
Sbjct: 130 cacgatgattatcatatgatgttgaggttcttgaaagcgaggaaatttgatgttgagaaa 189
Query: 508 gctaa 512
|||||
Sbjct: 190 gctaa 194
Score = 46.1 bits (23), Expect = 0.028
Identities = 86/107 (80%)
Strand = Plus / Plus
Query: 1852 aacgcagccgtccgccgcgtggacgcgctggaagccgagctgatctccacgaagaaggcc 1911
|||||||||||| || | || ||||| || ||||| ||||| || | || || ||||||
Sbjct: 1546 aacgcagccgtctgcagagtagacgcacttgaagcagagctcatagctactaaaaaggcc 1605
Query: 1912 ctttacgatgctctgatgcgacaggatgagctgctcgcgtacattga 1958
|||||||| ||| ||||| ||||||| ||| | || || ||||||||
Sbjct: 1606 ctttacgaagctttgatgagacaggaagagttacttgcttacattga 1652
>ref|NM_127724.4| Arabidopsis thaliana transporter AT2G21520 mRNA, complete cds
Length = 1974
Score = 73.8 bits (37), Expect = 1e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||||||||| |||||||| |||||| | ||||| |||||||||| |||||||||
Sbjct: 130 cacgatgattatcatatgatgttgaggttcttgaaagcgaggaaatttgatgttgagaaa 189
Query: 508 gctaa 512
|||||
Sbjct: 190 gctaa 194
Score = 46.1 bits (23), Expect = 0.028
Identities = 86/107 (80%)
Strand = Plus / Plus
Query: 1852 aacgcagccgtccgccgcgtggacgcgctggaagccgagctgatctccacgaagaaggcc 1911
|||||||||||| || | || ||||| || ||||| ||||| || | || || ||||||
Sbjct: 1546 aacgcagccgtctgcagagtagacgcacttgaagcagagctcatagctactaaaaaggcc 1605
Query: 1912 ctttacgatgctctgatgcgacaggatgagctgctcgcgtacattga 1958
|||||||| ||| ||||| ||||||| ||| | || || ||||||||
Sbjct: 1606 ctttacgaagctttgatgagacaggaagagttacttgcttacattga 1652
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 73.8 bits (37), Expect = 1e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||||||||| |||||||| |||||| | ||||| |||||||||| |||||||||
Sbjct: 9223578 cacgatgattatcatatgatgttgaggttcttgaaagcgaggaaatttgatgttgagaaa 9223637
Query: 508 gctaa 512
|||||
Sbjct: 9223638 gctaa 9223642
Score = 50.1 bits (25), Expect = 0.002
Identities = 130/165 (78%)
Strand = Plus / Minus
Query: 674 aagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatg 733
|||||||||| | ||||| || ||||| || ||| | ||| ||||||| || |||||||
Sbjct: 9230160 aagttgatgccacaaagctgatgcaagtcactaccatcgataggtatgtcaagtaccatg 9230101
Query: 734 tcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaaa 793
| | ||| ||||||||| ||| | || ||||| |||||||| |||||||||| || |
Sbjct: 9230100 tgagagagtttgagaagactttcaatatcaaattaccagcttgttccattgctgccaaga 9230041
Query: 794 agcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|||| || ||| | ||| || || |||||||||||||||||||
Sbjct: 9230040 agcatattgatcagagcaccaccatcttggatgtgcaaggcgtgg 9229996
Score = 50.1 bits (25), Expect = 0.002
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 985 ttcctcgatccaaaaactgcttccaagatccatgttcttgggaataagtatcaacataag 1044
||||||||||||||||| | || ||||| |||||||||||||| || || |||| ||
Sbjct: 7094562 ttcctcgatccaaaaacgacatcaaagattcatgttcttgggaacaaataccaacccaaa 7094621
Query: 1045 ttgctcgaa 1053
|||||||||
Sbjct: 7094622 ttgctcgaa 7094630
Score = 46.1 bits (23), Expect = 0.028
Identities = 86/107 (80%)
Strand = Plus / Plus
Query: 1852 aacgcagccgtccgccgcgtggacgcgctggaagccgagctgatctccacgaagaaggcc 1911
|||||||||||| || | || ||||| || ||||| ||||| || | || || ||||||
Sbjct: 9225860 aacgcagccgtctgcagagtagacgcacttgaagcagagctcatagctactaaaaaggcc 9225919
Query: 1912 ctttacgatgctctgatgcgacaggatgagctgctcgcgtacattga 1958
|||||||| ||| ||||| ||||||| ||| | || || ||||||||
Sbjct: 9225920 ctttacgaagctttgatgagacaggaagagttacttgcttacattga 9225966
Score = 44.1 bits (22), Expect = 0.11
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
||||||||| ||||||||||| | ||||| || | ||| |||| ||||| ||||||||
Sbjct: 9230468 cacgatgatcatcacatgatgctgaggtttctgagggcaaggaagtttgatcttgagaaa 9230409
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaa 545
|| ||| |||||| | || |||||| ||||||||||
Sbjct: 9230408 gcaaagcaaatgtggactgatatgatccattggaggaa 9230371
>gb|AY037182.1| Arabidopsis thaliana AT4g39170/T22F8_70 mRNA, complete cds
Length = 2214
Score = 56.0 bits (28), Expect = 3e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||| ||||| |||||||| |||||| | || || ||||||| || ||||||||
Sbjct: 520 cacgatgactatcatatgatgttgaggttcttgaaggctaggaaattcgacattgagaaa 579
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaaggaatt 551
|||||| |||||| | || |||||| | ||||||||||||||
Sbjct: 580 gctaagcacatgtgggctgatatgatccagtggaggaaggaatt 623
>gb|AY133598.1| Arabidopsis thaliana AT4g39170/T22F8_70 mRNA, complete cds
Length = 1752
Score = 56.0 bits (28), Expect = 3e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||| ||||| |||||||| |||||| | || || ||||||| || ||||||||
Sbjct: 307 cacgatgactatcatatgatgttgaggttcttgaaggctaggaaattcgacattgagaaa 366
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaaggaatt 551
|||||| |||||| | || |||||| | ||||||||||||||
Sbjct: 367 gctaagcacatgtgggctgatatgatccagtggaggaaggaatt 410
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 56.0 bits (28), Expect = 3e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||| ||||| |||||||| |||||| | || || ||||||| || ||||||||
Sbjct: 14154223 cacgatgactatcatatgatgttgaggttcttgaaggctaggaaattcgacattgagaaa 14154282
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaaggaatt 551
|||||| |||||| | || |||||| | ||||||||||||||
Sbjct: 14154283 gctaagcacatgtgggctgatatgatccagtggaggaaggaatt 14154326
Score = 48.1 bits (24), Expect = 0.007
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 679 gatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatgtcaaa 738
||||| ||||||||| | ||||||||||| | || ||||| || ||||| |||||||||
Sbjct: 12429438 gatgctaacaagctactccaagtgacaacaatggaccggtacgtgaaatatcatgtcaaa 12429497
Query: 739 gaatttgagaag 750
|| || ||||||
Sbjct: 12429498 gagttcgagaag 12429509
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project)
Length = 89035
Score = 56.0 bits (28), Expect = 3e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||| ||||| |||||||| |||||| | || || ||||||| || ||||||||
Sbjct: 24121 cacgatgactatcatatgatgttgaggttcttgaaggctaggaaattcgacattgagaaa 24180
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaaggaatt 551
|||||| |||||| | || |||||| | ||||||||||||||
Sbjct: 24181 gctaagcacatgtgggctgatatgatccagtggaggaaggaatt 24224
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90
Length = 198987
Score = 56.0 bits (28), Expect = 3e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||| ||||| |||||||| |||||| | || || ||||||| || ||||||||
Sbjct: 155585 cacgatgactatcatatgatgttgaggttcttgaaggctaggaaattcgacattgagaaa 155644
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaaggaatt 551
|||||| |||||| | || |||||| | ||||||||||||||
Sbjct: 155645 gctaagcacatgtgggctgatatgatccagtggaggaaggaatt 155688
>ref|NM_120077.2| Arabidopsis thaliana phosphatidylinositol transporter/ transporter
AT4G39170 mRNA, complete cds
Length = 2216
Score = 56.0 bits (28), Expect = 3e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||| ||||| |||||||| |||||| | || || ||||||| || ||||||||
Sbjct: 521 cacgatgactatcatatgatgttgaggttcttgaaggctaggaaattcgacattgagaaa 580
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaaggaatt 551
|||||| |||||| | || |||||| | ||||||||||||||
Sbjct: 581 gctaagcacatgtgggctgatatgatccagtggaggaaggaatt 624
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 56.0 bits (28), Expect = 3e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||| ||||| |||||||| |||||| | || || ||||||| || ||||||||
Sbjct: 18241423 cacgatgactatcatatgatgttgaggttcttgaaggctaggaaattcgacattgagaaa 18241482
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaaggaatt 551
|||||| |||||| | || |||||| | ||||||||||||||
Sbjct: 18241483 gctaagcacatgtgggctgatatgatccagtggaggaaggaatt 18241526
Score = 48.1 bits (24), Expect = 0.007
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 679 gatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatgtcaaa 738
||||| ||||||||| | ||||||||||| | || ||||| || ||||| |||||||||
Sbjct: 16516654 gatgctaacaagctactccaagtgacaacaatggaccggtacgtgaaatatcatgtcaaa 16516713
Query: 739 gaatttgagaag 750
|| || ||||||
Sbjct: 16516714 gagttcgagaag 16516725
>gb|AY057587.1| Arabidopsis thaliana At2g21540/F2G1.19 mRNA, complete cds
Length = 2030
Score = 54.0 bits (27), Expect = 1e-004
Identities = 141/179 (78%)
Strand = Plus / Plus
Query: 674 aagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatg 733
|||||||||| | ||||| || ||||| || ||| | ||| ||||||| || |||||||
Sbjct: 683 aagttgatgccacaaagctgatgcaagtcactaccatcgataggtatgtcaagtaccatg 742
Query: 734 tcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaaa 793
| | ||| ||||||||| ||| | || ||||| |||||||| |||||||||| || |
Sbjct: 743 tgagagagtttgagaagactttcaatatcaaattaccagcttgttccattgctgccaaga 802
Query: 794 agcacatagattcgtccactactattttggatgtgcaaggcgtgggtttcaagaacttc 852
|||| || ||| | ||| || || |||||||||||||||||||| || |||| ||||
Sbjct: 803 agcatattgatcagagcaccaccatcttggatgtgcaaggcgtggggttgaagagcttc 861
Score = 44.1 bits (22), Expect = 0.11
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
||||||||| ||||||||||| | ||||| || | ||| |||| ||||| ||||||||
Sbjct: 454 cacgatgatcatcacatgatgctgaggtttctgagggcaaggaagtttgatcttgagaaa 513
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaa 545
|| ||| |||||| | || |||||| ||||||||||
Sbjct: 514 gcaaagcaaatgtggactgatatgatccattggaggaa 551
Score = 42.1 bits (21), Expect = 0.43
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 886 cagaagatcgacagtgataactacccagagaca 918
||||||||||| || ||||||||||| ||||||
Sbjct: 895 cagaagatcgatagcgataactaccctgagaca 927
>dbj|AK176420.1| Arabidopsis thaliana mRNA for putative
phosphatidylinositol/phophatidylcholine transfer
protein, complete cds, clone: RAFL24-15-M01
Length = 2090
Score = 54.0 bits (27), Expect = 1e-004
Identities = 141/179 (78%)
Strand = Plus / Plus
Query: 674 aagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatg 733
|||||||||| | ||||| || ||||| || ||| | ||| ||||||| || |||||||
Sbjct: 647 aagttgatgccacaaagctgatgcaagtcactaccatcgataggtatgtcaagtaccatg 706
Query: 734 tcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaaa 793
| | ||| ||||||||| ||| | || ||||| |||||||| |||||||||| || |
Sbjct: 707 tgagagagtttgagaagactttcaatatcaaattaccagcttgttccattgctgccaaga 766
Query: 794 agcacatagattcgtccactactattttggatgtgcaaggcgtgggtttcaagaacttc 852
|||| || ||| | ||| || || |||||||||||||||||||| || |||| ||||
Sbjct: 767 agcatattgatcagagcaccaccatcttggatgtgcaaggcgtggggttgaagagcttc 825
Score = 44.1 bits (22), Expect = 0.11
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
||||||||| ||||||||||| | ||||| || | ||| |||| ||||| ||||||||
Sbjct: 418 cacgatgatcatcacatgatgctgaggtttctgagggcaaggaagtttgatcttgagaaa 477
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaa 545
|| ||| |||||| | || |||||| ||||||||||
Sbjct: 478 gcaaagcaaatgtggactgatatgatccattggaggaa 515
Score = 42.1 bits (21), Expect = 0.43
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 886 cagaagatcgacagtgataactacccagagaca 918
||||||||||| || ||||||||||| ||||||
Sbjct: 859 cagaagatcgatagcgataactaccctgagaca 891
>ref|NM_127726.2| Arabidopsis thaliana phosphatidylinositol transporter/ transporter
AT2G21540 transcript variant AT2G21540.1 mRNA, complete
cds
Length = 2106
Score = 54.0 bits (27), Expect = 1e-004
Identities = 141/179 (78%)
Strand = Plus / Plus
Query: 674 aagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatg 733
|||||||||| | ||||| || ||||| || ||| | ||| ||||||| || |||||||
Sbjct: 681 aagttgatgccacaaagctgatgcaagtcactaccatcgataggtatgtcaagtaccatg 740
Query: 734 tcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaaa 793
| | ||| ||||||||| ||| | || ||||| |||||||| |||||||||| || |
Sbjct: 741 tgagagagtttgagaagactttcaatatcaaattaccagcttgttccattgctgccaaga 800
Query: 794 agcacatagattcgtccactactattttggatgtgcaaggcgtgggtttcaagaacttc 852
|||| || ||| | ||| || || |||||||||||||||||||| || |||| ||||
Sbjct: 801 agcatattgatcagagcaccaccatcttggatgtgcaaggcgtggggttgaagagcttc 859
Score = 44.1 bits (22), Expect = 0.11
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
||||||||| ||||||||||| | ||||| || | ||| |||| ||||| ||||||||
Sbjct: 452 cacgatgatcatcacatgatgctgaggtttctgagggcaaggaagtttgatcttgagaaa 511
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaa 545
|| ||| |||||| | || |||||| ||||||||||
Sbjct: 512 gcaaagcaaatgtggactgatatgatccattggaggaa 549
Score = 42.1 bits (21), Expect = 0.43
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 886 cagaagatcgacagtgataactacccagagaca 918
||||||||||| || ||||||||||| ||||||
Sbjct: 893 cagaagatcgatagcgataactaccctgagaca 925
>ref|NM_001036312.1| Arabidopsis thaliana phosphatidylinositol transporter/ transporter
AT2G21540 transcript variant AT2G21540.2 mRNA, complete
cds
Length = 2079
Score = 54.0 bits (27), Expect = 1e-004
Identities = 141/179 (78%)
Strand = Plus / Plus
Query: 674 aagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatg 733
|||||||||| | ||||| || ||||| || ||| | ||| ||||||| || |||||||
Sbjct: 647 aagttgatgccacaaagctgatgcaagtcactaccatcgataggtatgtcaagtaccatg 706
Query: 734 tcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaaa 793
| | ||| ||||||||| ||| | || ||||| |||||||| |||||||||| || |
Sbjct: 707 tgagagagtttgagaagactttcaatatcaaattaccagcttgttccattgctgccaaga 766
Query: 794 agcacatagattcgtccactactattttggatgtgcaaggcgtgggtttcaagaacttc 852
|||| || ||| | ||| || || |||||||||||||||||||| || |||| ||||
Sbjct: 767 agcatattgatcagagcaccaccatcttggatgtgcaaggcgtggggttgaagagcttc 825
Score = 44.1 bits (22), Expect = 0.11
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
||||||||| ||||||||||| | ||||| || | ||| |||| ||||| ||||||||
Sbjct: 418 cacgatgatcatcacatgatgctgaggtttctgagggcaaggaagtttgatcttgagaaa 477
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaa 545
|| ||| |||||| | || |||||| ||||||||||
Sbjct: 478 gcaaagcaaatgtggactgatatgatccattggaggaa 515
Score = 42.1 bits (21), Expect = 0.43
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 886 cagaagatcgacagtgataactacccagagaca 918
||||||||||| || ||||||||||| ||||||
Sbjct: 859 cagaagatcgatagcgataactaccctgagaca 891
>gb|T88422.1|T88422 12118 Lambda-PRL2 Arabidopsis thaliana cDNA clone 156C7T7, mRNA
sequence
Length = 418
Score = 50.1 bits (25), Expect = 0.002
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 985 ttcctcgatccaaaaactgcttccaagatccatgttcttgggaataagtatcaacataag 1044
||||||||||||||||| | || ||||| |||||||||||||| || || |||| ||
Sbjct: 171 ttcctcgatccaaaaacgacatcaaagattcatgttcttgggaacaaataccaacccaaa 230
Query: 1045 ttgctcgaa 1053
|||||||||
Sbjct: 231 ttgctcgaa 239
>gb|AF439836.1|AF439836 Arabidopsis thaliana At2g16380/F16F14.12 mRNA, complete cds
Length = 2041
Score = 50.1 bits (25), Expect = 0.002
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 985 ttcctcgatccaaaaactgcttccaagatccatgttcttgggaataagtatcaacataag 1044
||||||||||||||||| | || ||||| |||||||||||||| || || |||| ||
Sbjct: 885 ttcctcgatccaaaaacgacatcaaagattcatgttcttgggaacaaataccaacccaaa 944
Query: 1045 ttgctcgaa 1053
|||||||||
Sbjct: 945 ttgctcgaa 953
>gb|AC007047.7| Arabidopsis thaliana chromosome 2 clone F16F14 map mi398, complete
sequence
Length = 114418
Score = 50.1 bits (25), Expect = 0.002
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 985 ttcctcgatccaaaaactgcttccaagatccatgttcttgggaataagtatcaacataag 1044
||||||||||||||||| | || ||||| |||||||||||||| || || |||| ||
Sbjct: 58309 ttcctcgatccaaaaacgacatcaaagattcatgttcttgggaacaaataccaacccaaa 58250
Query: 1045 ttgctcgaa 1053
|||||||||
Sbjct: 58249 ttgctcgaa 58241
>gb|AC007119.6| Arabidopsis thaliana chromosome 2 clone F2G1 map mi238, complete
sequence
Length = 54433
Score = 50.1 bits (25), Expect = 0.002
Identities = 130/165 (78%)
Strand = Plus / Plus
Query: 674 aagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatg 733
|||||||||| | ||||| || ||||| || ||| | ||| ||||||| || |||||||
Sbjct: 52908 aagttgatgccacaaagctgatgcaagtcactaccatcgataggtatgtcaagtaccatg 52967
Query: 734 tcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaaa 793
| | ||| ||||||||| ||| | || ||||| |||||||| |||||||||| || |
Sbjct: 52968 tgagagagtttgagaagactttcaatatcaaattaccagcttgttccattgctgccaaga 53027
Query: 794 agcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|||| || ||| | ||| || || |||||||||||||||||||
Sbjct: 53028 agcatattgatcagagcaccaccatcttggatgtgcaaggcgtgg 53072
Score = 44.1 bits (22), Expect = 0.11
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
||||||||| ||||||||||| | ||||| || | ||| |||| ||||| ||||||||
Sbjct: 52600 cacgatgatcatcacatgatgctgaggtttctgagggcaaggaagtttgatcttgagaaa 52659
Query: 508 gctaagagtatgtggtcagacatgatcaattggaggaa 545
|| ||| |||||| | || |||||| ||||||||||
Sbjct: 52660 gcaaagcaaatgtggactgatatgatccattggaggaa 52697
>ref|NM_127192.1| Arabidopsis thaliana transporter AT2G16380 mRNA, complete cds
Length = 2041
Score = 50.1 bits (25), Expect = 0.002
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 985 ttcctcgatccaaaaactgcttccaagatccatgttcttgggaataagtatcaacataag 1044
||||||||||||||||| | || ||||| |||||||||||||| || || |||| ||
Sbjct: 885 ttcctcgatccaaaaacgacatcaaagattcatgttcttgggaacaaataccaacccaaa 944
Query: 1045 ttgctcgaa 1053
|||||||||
Sbjct: 945 ttgctcgaa 953
>ref|NM_127375.1| Arabidopsis thaliana transporter AT2G18180 mRNA, complete cds
Length = 1677
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 1009 aagatccatgttcttgggaataagtatcaacataagttgctcgaaataattga 1061
||||||||||||||||| || ||||| ||| |||||||| |||||||||||
Sbjct: 790 aagatccatgttcttggcaacaagtaccaaagcaagttgcttgaaataattga 842
>emb|AL764560.1| Arabidopsis thaliana T-DNA flanking sequence GK-128B08-012669,
genomic survey sequence
Length = 299
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 430 gatttgctgccaccacagcacgatgattatca 461
|||||||| ||||||| |||||||||||||||
Sbjct: 130 gatttgcttccaccacggcacgatgattatca 99
>emb|BX822701.1|CNS0A7DR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB59ZC11 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2044
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 430 gatttgctgccaccacagcacgatgattatca 461
|||||||| ||||||| |||||||||||||||
Sbjct: 313 gatttgcttccaccacggcacgatgattatca 344
>dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8
Length = 78529
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 430 gatttgctgccaccacagcacgatgattatca 461
|||||||| ||||||| |||||||||||||||
Sbjct: 39314 gatttgcttccaccacggcacgatgattatca 39345
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 430 gatttgctgccaccacagcacgatgattatca 461
|||||||| ||||||| |||||||||||||||
Sbjct: 9008780 gatttgcttccaccacggcacgatgattatca 9008811
>emb|AJ616026.1| Arabidopsis thaliana mRNA for can of worms 1 protein (COW1 gene)
Length = 2768
Score = 48.1 bits (24), Expect = 0.007
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 679 gatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatgtcaaa 738
||||| ||||||||| | ||||||||||| | || ||||| || ||||| |||||||||
Sbjct: 576 gatgctaacaagctactccaagtgacaacaatggaccggtacgtgaaatatcatgtcaaa 635
Query: 739 gaatttgagaag 750
|| || ||||||
Sbjct: 636 gagttcgagaag 647
>emb|AJ616027.1| Arabidopsis thaliana COW1 gene for can of worms 1 protein, exons 1-12
Length = 6188
Score = 48.1 bits (24), Expect = 0.007
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 679 gatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatgtcaaa 738
||||| ||||||||| | ||||||||||| | || ||||| || ||||| |||||||||
Sbjct: 3238 gatgctaacaagctactccaagtgacaacaatggaccggtacgtgaaatatcatgtcaaa 3297
Query: 739 gaatttgagaag 750
|| || ||||||
Sbjct: 3298 gagttcgagaag 3309
>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project)
Length = 125502
Score = 48.1 bits (24), Expect = 0.007
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 679 gatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatgtcaaa 738
||||| ||||||||| | ||||||||||| | || ||||| || ||||| |||||||||
Sbjct: 52659 gatgctaacaagctactccaagtgacaacaatggaccggtacgtgaaatatcatgtcaaa 52718
Query: 739 gaatttgagaag 750
|| || ||||||
Sbjct: 52719 gagttcgagaag 52730
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81
Length = 195921
Score = 48.1 bits (24), Expect = 0.007
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 679 gatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatgtcaaa 738
||||| ||||||||| | ||||||||||| | || ||||| || ||||| |||||||||
Sbjct: 162348 gatgctaacaagctactccaagtgacaacaatggaccggtacgtgaaatatcatgtcaaa 162407
Query: 739 gaatttgagaag 750
|| || ||||||
Sbjct: 162408 gagttcgagaag 162419
>ref|NM_113396.2| Arabidopsis thaliana transporter AT3G24840 mRNA, complete cds
Length = 2046
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 430 gatttgctgccaccacagcacgatgattatca 461
|||||||| ||||||| |||||||||||||||
Sbjct: 313 gatttgcttccaccacggcacgatgattatca 344
>ref|NM_119624.2| Arabidopsis thaliana transporter AT4G34580 mRNA, complete cds
Length = 2767
Score = 48.1 bits (24), Expect = 0.007
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 679 gatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatgtcaaa 738
||||| ||||||||| | ||||||||||| | || ||||| || ||||| |||||||||
Sbjct: 576 gatgctaacaagctactccaagtgacaacaatggaccggtacgtgaaatatcatgtcaaa 635
Query: 739 gaatttgagaag 750
|| || ||||||
Sbjct: 636 gagttcgagaag 647
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 430 gatttgctgccaccacagcacgatgattatca 461
|||||||| ||||||| |||||||||||||||
Sbjct: 9067669 gatttgcttccaccacggcacgatgattatca 9067700
>gb|U64965.1|U64965 ATU64965 Lambda-PRL2 (P.Kapranov) Arabidopsis thaliana cDNA clone
R64923, mRNA sequence
Length = 751
Score = 46.1 bits (23), Expect = 0.028
Identities = 86/107 (80%)
Strand = Plus / Plus
Query: 1852 aacgcagccgtccgccgcgtggacgcgctggaagccgagctgatctccacgaagaaggcc 1911
|||||||||||| || | || ||||| || ||||| ||||| || | || || ||||||
Sbjct: 434 aacgcagccgtctgcagagtagacgcacttgaagcagagctcatagctactaaaaaggcc 493
Query: 1912 ctttacgatgctctgatgcgacaggatgagctgctcgcgtacattga 1958
|||||||| ||| ||||| ||||||| ||| | || || ||||||||
Sbjct: 494 ctttacgaagctttgatgagacaggaagagttacttgcttacattga 540
>gb|CD533011.1|CD533011 29M11 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 442
Score = 46.1 bits (23), Expect = 0.028
Identities = 86/107 (80%)
Strand = Plus / Minus
Query: 1852 aacgcagccgtccgccgcgtggacgcgctggaagccgagctgatctccacgaagaaggcc 1911
|||||||||||| || | || ||||| || ||||| ||||| || | || || ||||||
Sbjct: 403 aacgcagccgtctgcagagtagacgcacttgaagcagagctcatagctactaaaaaggcc 344
Query: 1912 ctttacgatgctctgatgcgacaggatgagctgctcgcgtacattga 1958
|||||||| ||| ||||| ||||||| ||| | || || ||||||||
Sbjct: 343 ctttacgaagctttgatgagacaggaagagttacttgcttacattga 297
>emb|BX531509.1| Arabidopsis thaliana T-DNA flanking sequence GK-481A10-019885,
genomic survey sequence
Length = 591
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 622 tatcatggagtagataaagagggaagacctgtatacat 659
||||||||||| ||||| || ||||||||||| |||||
Sbjct: 285 tatcatggagttgataaggaaggaagacctgtctacat 322
>gb|AV827184.1|AV827184 AV827184 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-12-E04 5',
mRNA sequence
Length = 615
Score = 44.1 bits (22), Expect = 0.11
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 448 cacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaa 507
|||||||| ||||| |||||||| |||||| | || || ||||||| || ||||||||
Sbjct: 521 cacgatgactatcatatgatgttgaggttcttgaaggctaggaaattcgacattgagaaa 580
Query: 508 gctaag 513
||||||
Sbjct: 581 gctaag 586
>gb|BX841314.1|BX841314 BX841314 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB30ZH08 5PRIM, mRNA sequence
Length = 1092
Score = 44.1 bits (22), Expect = 0.11
Identities = 73/90 (81%)
Strand = Plus / Plus
Query: 763 aaatttccagcttgcaccattgctgctaaaaagcacatagattcgtccactactattttg 822
||||| |||||||| |||||||||| || ||||| || ||| | ||| || || |||
Sbjct: 70 aaattaccagcttgttccattgctgccaagaagcatattgatcagagcaccaccatcttg 129
Query: 823 gatgtgcaaggcgtgggtttcaagaacttc 852
||||||||||||||||| || |||| ||||
Sbjct: 130 gatgtgcaaggcgtggggttgaagagcttc 159
Score = 42.1 bits (21), Expect = 0.43
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 886 cagaagatcgacagtgataactacccagagaca 918
||||||||||| || ||||||||||| ||||||
Sbjct: 193 cagaagatcgatagcgataactaccctgagaca 225
>gb|AC002328.2|AC002328 Genomic sequence for Arabidopsis thaliana BAC F20N2 from chromosome I,
complete sequence
Length = 109171
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 622 tatcatggagtagataaagagggaagacctgtatacat 659
||||||||||| ||||| || ||||||||||| |||||
Sbjct: 49146 tatcatggagttgataaggaaggaagacctgtctacat 49109
>emb|BX816980.1|CNS0AASO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH79ZF04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2477
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 622 tatcatggagtagataaagagggaagacctgtatacat 659
||||||||||| ||||| || ||||||||||| |||||
Sbjct: 773 tatcatggagttgataaggaaggaagacctgtctacat 810
>gb|BT021992.1| Arabidopsis thaliana At1g55690 gene, complete cds
Length = 2454
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 622 tatcatggagtagataaagagggaagacctgtatacat 659
||||||||||| ||||| || ||||||||||| |||||
Sbjct: 765 tatcatggagttgataaggaaggaagacctgtctacat 802
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 622 tatcatggagtagataaagagggaagacctgtatacat 659
||||||||||| ||||| || ||||||||||| |||||
Sbjct: 5170447 tatcatggagttgataaggaaggaagacctgtctacat 5170410
>ref|NM_179485.1| Arabidopsis thaliana transporter AT1G55690 transcript variant
AT1G55690.2 mRNA, complete cds
Length = 2521
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 622 tatcatggagtagataaagagggaagacctgtatacat 659
||||||||||| ||||| || ||||||||||| |||||
Sbjct: 778 tatcatggagttgataaggaaggaagacctgtctacat 815
>ref|NM_104445.2| Arabidopsis thaliana transporter AT1G55690 transcript variant
AT1G55690.3 mRNA, complete cds
Length = 2756
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 622 tatcatggagtagataaagagggaagacctgtatacat 659
||||||||||| ||||| || ||||||||||| |||||
Sbjct: 902 tatcatggagttgataaggaaggaagacctgtctacat 939
>ref|NM_179484.2| Arabidopsis thaliana transporter AT1G55690 transcript variant
AT1G55690.1 mRNA, complete cds
Length = 2607
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 622 tatcatggagtagataaagagggaagacctgtatacat 659
||||||||||| ||||| || ||||||||||| |||||
Sbjct: 902 tatcatggagttgataaggaaggaagacctgtctacat 939
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 622 tatcatggagtagataaagagggaagacctgtatacat 659
||||||||||| ||||| || ||||||||||| |||||
Sbjct: 20814673 tatcatggagttgataaggaaggaagacctgtctacat 20814636
>gb|CD532588.1|CD532588 28A13 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 420
Score = 42.1 bits (21), Expect = 0.43
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 1906 aaggccctttacgatgctctgatgcgacaggatgagctgctcgcgtacattga 1958
|||||||||||||| ||| ||||| ||||||| ||| | || || ||||||||
Sbjct: 372 aaggccctttacgaagctttgatgagacaggaagagttacttgcttacattga 320
>gb|AY050419.1| Arabidopsis thaliana C7A10_870/C7A10_870 mRNA, complete cds
Length = 1949
Score = 42.1 bits (21), Expect = 0.43
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 1012 atccatgttcttgggaataagtatcaacataagttgctcgaaataattgacgagtgtgaa 1071
|||||||||||||| || ||||| ||| |||||||| || |||||||| || |||||
Sbjct: 892 atccatgttcttggcaacaagtaccaaagcaagttgcttgagataattgatgaaagtgaa 951
Query: 1072 ctgccagaatttcttgg 1088
|| || || ||||||||
Sbjct: 952 cttcctgagtttcttgg 968
>gb|BT000834.1| Arabidopsis thaliana hosphatidylinositol/phophatidylcholine transfer
protein (At4g36490/C7A10_870) mRNA, complete cds
Length = 1632
Score = 42.1 bits (21), Expect = 0.43
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 1012 atccatgttcttgggaataagtatcaacataagttgctcgaaataattgacgagtgtgaa 1071
|||||||||||||| || ||||| ||| |||||||| || |||||||| || |||||
Sbjct: 784 atccatgttcttggcaacaagtaccaaagcaagttgcttgagataattgatgaaagtgaa 843
Query: 1072 ctgccagaatttcttgg 1088
|| || || ||||||||
Sbjct: 844 cttcctgagtttcttgg 860
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,248,077
Number of Sequences: 1013581
Number of extensions: 1248077
Number of successful extensions: 104024
Number of sequences better than 0.5: 51
Number of HSP's better than 0.5 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99384
Number of HSP's gapped (non-prelim): 4640
length of query: 2357
length of database: 908,940,872
effective HSP length: 21
effective length of query: 2336
effective length of database: 887,655,671
effective search space: 2073563647456
effective search space used: 2073563647456
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)