BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829479.2.1
(1245 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR750029.1|DR750029 78-L022529-065-010-F10-SeLA MPIZ-ADI... 80 1e-012
gb|DR750030.1|DR750030 78-L022530-065-010-F10-SeLB MPIZ-ADI... 80 1e-012
gb|DR751298.1|DR751298 13-L022242-065-008-E02-SeLA MPIZ-ADI... 80 1e-012
gb|M55553.1|ATHAGL5A Arabidopsis thaliana transcription fac... 80 1e-012
emb|X53579.1|ATAGAMSG A.thaliana agamous (AG) gene 80 1e-012
ref|NM_118013.2| Arabidopsis thaliana AG (AGAMOUS); transcr... 80 1e-012
ref|NM_180046.1| Arabidopsis thaliana SHP2 (SHATTERPROOF 2)... 80 1e-012
ref|NM_129844.3| Arabidopsis thaliana SHP2 (SHATTERPROOF 2)... 80 1e-012
gb|DR751299.1|DR751299 13-L022243-065-008-E02-SeLB MPIZ-ADI... 70 1e-009
emb|AX320930.1| Sequence 6 from Patent WO0179517 70 1e-009
gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D1... 70 1e-009
gb|AY727646.1| Arabidopsis thaliana ecotype Ler-0 SHATTERPR... 70 1e-009
gb|AY727647.1| Arabidopsis thaliana ecotype Wassilewskija S... 70 1e-009
gb|AY727648.1| Arabidopsis thaliana ecotype Co-1 SHATTERPRO... 70 1e-009
gb|AY727649.1| Arabidopsis thaliana ecotype Es-0 SHATTERPRO... 70 1e-009
gb|AY727650.1| Arabidopsis thaliana ecotype Ita-0 SHATTERPR... 70 1e-009
gb|AY727651.1| Arabidopsis thaliana ecotype Kas-1 SHATTERPR... 70 1e-009
gb|AY727652.1| Arabidopsis thaliana ecotype Li-3 SHATTERPRO... 70 1e-009
gb|AY727653.1| Arabidopsis thaliana ecotype Lu-1 SHATTERPRO... 70 1e-009
gb|AY727654.1| Arabidopsis thaliana ecotype Mt-0 SHATTERPRO... 70 1e-009
gb|AY727655.1| Arabidopsis thaliana ecotype PLA-0 SHATTERPR... 70 1e-009
gb|AY727656.1| Arabidopsis thaliana ecotype Pog-0 SHATTERPR... 70 1e-009
gb|AY727657.1| Arabidopsis thaliana ecotype Tsu-1 SHATTERPR... 70 1e-009
gb|AY727658.1| Arabidopsis thaliana ecotype PHW-1 SHATTERPR... 70 1e-009
gb|AY727659.1| Arabidopsis thaliana ecotype PHW-33 SHATTERP... 70 1e-009
gb|AY727660.1| Arabidopsis thaliana ecotype Kondara SHATTER... 70 1e-009
gb|AY727661.1| Arabidopsis thaliana ecotype An-2 SHATTERPRO... 70 1e-009
gb|AY727662.1| Arabidopsis thaliana ecotype Br-0 SHATTERPRO... 70 1e-009
gb|AY727663.1| Arabidopsis thaliana ecotype Cha-0 SHATTERPR... 70 1e-009
gb|AY727664.1| Arabidopsis thaliana ecotype Di-0 SHATTERPRO... 70 1e-009
gb|AY727665.1| Arabidopsis thaliana ecotype Est-1 SHATTERPR... 70 1e-009
gb|AY727666.1| Arabidopsis thaliana ecotype Kl-5 SHATTERPRO... 70 1e-009
gb|AY727667.1| Arabidopsis thaliana ecotype Ko-2 SHATTERPRO... 70 1e-009
gb|AY727668.1| Arabidopsis thaliana ecotype Lip-0 SHATTERPR... 70 1e-009
gb|AY727669.1| Arabidopsis thaliana ecotype 9481B SHATTERPR... 70 1e-009
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 70 1e-009
gb|M55550.1|ATHAGL1A Arabidopsis thaliana transcription fac... 64 6e-008
gb|AY086196.1| Arabidopsis thaliana clone 22339 mRNA, compl... 64 6e-008
ref|NM_115740.2| Arabidopsis thaliana SHP1 (SHATTERPROOF 1)... 64 6e-008
emb|AX380953.1| Sequence 7 from Patent WO0210415 62 2e-007
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 62 2e-007
emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome ... 62 2e-007
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 62 2e-007
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 62 2e-007
gb|BT003841.1| Arabidopsis thaliana clone RAFL15-25-E19 (R2... 58 4e-006
gb|CF773945.1|CF773945 AG_FSL_25A05 Arabidopsis ag-1 35S:AG... 52 2e-004
emb|AX320929.1| Sequence 5 from Patent WO0179517 52 2e-004
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 52 2e-004
gb|AY727622.1| Arabidopsis thaliana ecotype Ler-0 SHATTERPR... 52 2e-004
gb|AY727623.1| Arabidopsis thaliana ecotype Wassilewskija S... 52 2e-004
gb|AY727624.1| Arabidopsis thaliana ecotype Co-1 SHATTERPRO... 52 2e-004
gb|AY727625.1| Arabidopsis thaliana ecotype Es-0 SHATTERPRO... 52 2e-004
gb|AY727626.1| Arabidopsis thaliana ecotype Ita-0 SHATTERPR... 52 2e-004
gb|AY727627.1| Arabidopsis thaliana ecotype Kas-1 SHATTERPR... 52 2e-004
gb|AY727628.1| Arabidopsis thaliana ecotype Li-3 SHATTERPRO... 52 2e-004
gb|AY727629.1| Arabidopsis thaliana ecotype Lu-1 SHATTERPRO... 52 2e-004
gb|AY727630.1| Arabidopsis thaliana ecotype Mt-0 SHATTERPRO... 52 2e-004
gb|AY727631.1| Arabidopsis thaliana ecotype PLA-0 SHATTERPR... 52 2e-004
gb|AY727632.1| Arabidopsis thaliana ecotype Pog-0 SHATTERPR... 52 2e-004
gb|AY727633.1| Arabidopsis thaliana ecotype Tsu-1 SHATTERPR... 52 2e-004
gb|AY727634.1| Arabidopsis thaliana ecotype PHW-1 SHATTERPR... 52 2e-004
gb|AY727635.1| Arabidopsis thaliana ecotype PHW-33 SHATTERP... 52 2e-004
gb|AY727636.1| Arabidopsis thaliana ecotype Kondara SHATTER... 52 2e-004
gb|AY727637.1| Arabidopsis thaliana ecotype An-2 SHATTERPRO... 52 2e-004
gb|AY727638.1| Arabidopsis thaliana ecotype Br-0 SHATTERPRO... 52 2e-004
gb|AY727639.1| Arabidopsis thaliana ecotype Di-0 SHATTERPRO... 52 2e-004
gb|AY727640.1| Arabidopsis thaliana ecotype Est-1 SHATTERPR... 52 2e-004
gb|AY727641.1| Arabidopsis thaliana ecotype Kl-5 SHATTERPRO... 52 2e-004
gb|AY727642.1| Arabidopsis thaliana ecotype Ko-2 SHATTERPRO... 52 2e-004
gb|AY727643.1| Arabidopsis thaliana ecotype Lip-0 SHATTERPR... 52 2e-004
gb|AY727644.1| Arabidopsis thaliana ecotype 9481B SHATTERPR... 52 2e-004
emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome... 52 2e-004
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 52 2e-004
gb|CB257827.1|CB257827 44-E012733-014-002-G04-T7R MPIZ-ADIS... 48 0.004
gb|BP562882.2|BP562882 BP562882 RAFL15 Arabidopsis thaliana... 44 0.058
gb|AQ969928.1|AQ969928 LERJR40TF LERG Arabidopsis thaliana ... 42 0.23
gb|AU235862.1|AU235862 AU235862 RAFL14 Arabidopsis thaliana... 42 0.23
gb|AU238414.1|AU238414 AU238414 RAFL17 Arabidopsis thaliana... 42 0.23
gb|CA781283.1|CA781283 014D08AF Infected Arabidopsis Leaf A... 42 0.23
gb|BP562777.2|BP562777 BP562777 RAFL14 Arabidopsis thaliana... 42 0.23
gb|BP797244.1|BP797244 BP797244 RAFL14 Arabidopsis thaliana... 42 0.23
gb|BP863735.1|BP863735 BP863735 RAFL21 Arabidopsis thaliana... 42 0.23
gb|AF312665.1|AF312665 Arabidopsis thaliana MADS-box protei... 42 0.23
gb|AF312666.1|AF312666 Arabidopsis thaliana MADS-box protei... 42 0.23
gb|AF342808.1|AF342808 Arabidopsis thaliana MADS affecting ... 42 0.23
gb|AY034083.1| Arabidopsis thaliana MADS box FLC1-like nucl... 42 0.23
gb|BT004598.1| Arabidopsis thaliana At1g77080 gene, complet... 42 0.23
gb|AY088709.1| Arabidopsis thaliana clone 92459 mRNA, compl... 42 0.23
dbj|BD268760.1| Alteration of flowering time in plants 42 0.23
gb|AC002291.1| Arabidopsis thaliana chromosome I BAC F22K20... 42 0.23
emb|BX842512.1|CNS0ACC5 Arabidopsis thaliana Full-length cD... 42 0.23
dbj|AK117577.1| Arabidopsis thaliana mRNA for (NM_148660) M... 42 0.23
dbj|AK175247.1| Arabidopsis thaliana mRNA, complete cds, cl... 42 0.23
dbj|AK176270.1| Arabidopsis thaliana mRNA, complete cds, cl... 42 0.23
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 42 0.23
ref|NM_106358.3| Arabidopsis thaliana MAF1 (MADS AFFECTING ... 42 0.23
ref|NM_180648.2| Arabidopsis thaliana MAF1 (MADS AFFECTING ... 42 0.23
ref|NM_180649.2| Arabidopsis thaliana MAF1 (MADS AFFECTING ... 42 0.23
ref|NM_202431.1| Arabidopsis thaliana MAF1 (MADS AFFECTING ... 42 0.23
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 42 0.23
>gb|DR750029.1|DR750029 78-L022529-065-010-F10-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 010-F10, mRNA sequence
Length = 910
Score = 79.8 bits (40), Expect = 1e-012
Identities = 169/212 (79%)
Strand = Plus / Minus
Query: 787 gccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcgg 846
|||||||||||||||||||| || || ||||||||||| | |||||| ||||| ||
Sbjct: 366 gccttcttgtacctctcaatagtaccttttacactgttgttagagtactcatagagacga 307
Query: 847 ccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtac 906
|| ||||| ||||| |||| ||| ||||| || || || ||||| || |||||||||||
Sbjct: 306 ccacggctagagaaaacgatgagtgcgacttcagcatcacagagaacagagagctcgtaa 247
Query: 907 gccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttc 966
|| |||||||||| || || | || ||||| || || || || || |||| ||||||
Sbjct: 246 gctttcttgagcaaaccatttctacgtttgcaaaaagtgacttgacgattcgttgtgttc 187
Query: 967 tcgatgcgcttgatctcgatcttgcctctccc 998
||||| || ||||| |||||||| ||||||||
Sbjct: 186 tcgatccgtttgatttcgatctttcctctccc 155
>gb|DR750030.1|DR750030 78-L022530-065-010-F10-SeLB MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 010-F10, mRNA sequence
Length = 838
Score = 79.8 bits (40), Expect = 1e-012
Identities = 169/212 (79%)
Strand = Plus / Plus
Query: 787 gccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcgg 846
|||||||||||||||||||| || || ||||||||||| | |||||| ||||| ||
Sbjct: 617 gccttcttgtacctctcaatagtaccttttacactgttgttagagtactcatagagacga 676
Query: 847 ccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtac 906
|| ||||| ||||| |||| ||| ||||| || || || ||||| || |||||||||||
Sbjct: 677 ccacggctagagaaaacgatgagtgcgacttcagcatcacagagaacagagagctcgtaa 736
Query: 907 gccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttc 966
|| |||||||||| || || | || ||||| || || || || || |||| ||||||
Sbjct: 737 gctttcttgagcaaaccatttctacgtttgcaaaaagtgacttgacgattcgttgtgttc 796
Query: 967 tcgatgcgcttgatctcgatcttgcctctccc 998
||||| || ||||| |||||||| ||||||||
Sbjct: 797 tcgatccgtttgatttcgatctttcctctccc 828
>gb|DR751298.1|DR751298 13-L022242-065-008-E02-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 008-E02, mRNA sequence
Length = 779
Score = 79.8 bits (40), Expect = 1e-012
Identities = 148/184 (80%)
Strand = Plus / Minus
Query: 815 tcacactgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcga 874
|||||||||||||||||||||||||||| ||||| || ||||||||| ||| || || |
Sbjct: 333 tcacactgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaa 274
Query: 875 cctcggcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgct 934
|||| ||||| || | || |||||||| || || |||||||| | || ||||| || |
Sbjct: 273 cctcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtt 214
Query: 935 tgcagaaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctc 994
||||||| || || || || |||| |||||||| || | ||| ||||| ||||| ||||
Sbjct: 213 tgcagaaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctc 154
Query: 995 tccc 998
||||
Sbjct: 153 tccc 150
>gb|M55553.1|ATHAGL5A Arabidopsis thaliana transcription factor (AGL5) mRNA, complete cds
Length = 963
Score = 79.8 bits (40), Expect = 1e-012
Identities = 148/184 (80%)
Strand = Plus / Minus
Query: 815 tcacactgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcga 874
|||||||||||||||||||||||||||| ||||| || ||||||||| ||| || || |
Sbjct: 309 tcacactgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaa 250
Query: 875 cctcggcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgct 934
|||| ||||| || | || |||||||| || || |||||||| | || ||||| || |
Sbjct: 249 cctcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtt 190
Query: 935 tgcagaaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctc 994
||||||| || || || || |||| |||||||| || | ||| ||||| ||||| ||||
Sbjct: 189 tgcagaaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctc 130
Query: 995 tccc 998
||||
Sbjct: 129 tccc 126
>emb|X53579.1|ATAGAMSG A.thaliana agamous (AG) gene
Length = 1458
Score = 79.8 bits (40), Expect = 1e-012
Identities = 169/212 (79%)
Strand = Plus / Minus
Query: 787 gccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcgg 846
|||||||||||||||||||| || || ||||||||||| | |||||| ||||| ||
Sbjct: 777 gccttcttgtacctctcaatagtaccttttacactgttgttagagtactcatagagacga 718
Query: 847 ccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtac 906
|| ||||| ||||| |||| ||| ||||| || || || ||||| || |||||||||||
Sbjct: 717 ccacggctagagaaaacgatgagtgcgacttcagcatcacagagaacagagagctcgtaa 658
Query: 907 gccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttc 966
|| |||||||||| || || | || ||||| || || || || || |||| ||||||
Sbjct: 657 gctttcttgagcaaaccatttctacgtttgcaaaaagtgacttgacgattcgttgtgttc 598
Query: 967 tcgatgcgcttgatctcgatcttgcctctccc 998
||||| || ||||| |||||||| ||||||||
Sbjct: 597 tcgatccgtttgatttcgatctttcctctccc 566
>ref|NM_118013.2| Arabidopsis thaliana AG (AGAMOUS); transcription factor AT4G18960
(AG) mRNA, partial cds
Length = 1532
Score = 79.8 bits (40), Expect = 1e-012
Identities = 169/212 (79%)
Strand = Plus / Minus
Query: 787 gccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcgg 846
|||||||||||||||||||| || || ||||||||||| | |||||| ||||| ||
Sbjct: 769 gccttcttgtacctctcaatagtcccttttacactgttgttagagtactcatagagacga 710
Query: 847 ccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtac 906
|| ||||| |||||||||| ||| ||||| || || || || || || |||||||||||
Sbjct: 709 ccacggctagagaagacgatgagtgcgacttcagcatcacaaagaacagagagctcgtaa 650
Query: 907 gccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttc 966
|| |||||||||| || || | || ||||| || || || || || |||| ||||||
Sbjct: 649 gctttcttgagcaaaccatttctacgtttgcaaaaagtgacttgacgattcgttgtgttc 590
Query: 967 tcgatgcgcttgatctcgatcttgcctctccc 998
||||| || ||||| |||||||| ||||||||
Sbjct: 589 tcgatccgtttgatttcgatctttcctctccc 558
>ref|NM_180046.1| Arabidopsis thaliana SHP2 (SHATTERPROOF 2); transcription factor
AT2G42830 (SHP2) transcript variant AT2G42830.2 mRNA,
complete cds
Length = 1030
Score = 79.8 bits (40), Expect = 1e-012
Identities = 148/184 (80%)
Strand = Plus / Minus
Query: 815 tcacactgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcga 874
|||||||||||||||||||||||||||| ||||| || ||||||||| ||| || || |
Sbjct: 308 tcacactgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaa 249
Query: 875 cctcggcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgct 934
|||| ||||| || | || |||||||| || || |||||||| | || ||||| || |
Sbjct: 248 cctcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtt 189
Query: 935 tgcagaaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctc 994
||||||| || || || || |||| |||||||| || | ||| ||||| ||||| ||||
Sbjct: 188 tgcagaaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctc 129
Query: 995 tccc 998
||||
Sbjct: 128 tccc 125
>ref|NM_129844.3| Arabidopsis thaliana SHP2 (SHATTERPROOF 2); transcription factor
AT2G42830 (SHP2) transcript variant AT2G42830.1 mRNA,
complete cds
Length = 1025
Score = 79.8 bits (40), Expect = 1e-012
Identities = 148/184 (80%)
Strand = Plus / Minus
Query: 815 tcacactgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcga 874
|||||||||||||||||||||||||||| ||||| || ||||||||| ||| || || |
Sbjct: 309 tcacactgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaa 250
Query: 875 cctcggcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgct 934
|||| ||||| || | || |||||||| || || |||||||| | || ||||| || |
Sbjct: 249 cctcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtt 190
Query: 935 tgcagaaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctc 994
||||||| || || || || |||| |||||||| || | ||| ||||| ||||| ||||
Sbjct: 189 tgcagaaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctc 130
Query: 995 tccc 998
||||
Sbjct: 129 tccc 126
>gb|DR751299.1|DR751299 13-L022243-065-008-E02-SeLB MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 008-E02, mRNA sequence
Length = 834
Score = 69.9 bits (35), Expect = 1e-009
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 815 tcacactgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcga 874
|||||||||||||||||||||||||||| ||||| || ||||||||| ||| || || |
Sbjct: 623 tcacactgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaa 682
Query: 875 cctcggcgtcgcagagcaccgagagctcgtacgccttcttgag 917
|||| ||||| || | || |||||||| || || ||||||||
Sbjct: 683 cctcagcgtcacacaagacagagagctcataagctttcttgag 725
>emb|AX320930.1| Sequence 6 from Patent WO0179517
Length = 6138
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 2927 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 2868
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 2867 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 2808
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 2807 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 2749
>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete
sequence
Length = 115310
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Plus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 60918 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 60977
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 60978 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 61037
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 61038 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 61096
>gb|AY727646.1| Arabidopsis thaliana ecotype Ler-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4829
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727647.1| Arabidopsis thaliana ecotype Wassilewskija SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4749
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727648.1| Arabidopsis thaliana ecotype Co-1 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4815
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727649.1| Arabidopsis thaliana ecotype Es-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4781
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727650.1| Arabidopsis thaliana ecotype Ita-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4820
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1730 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1671
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1670 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1611
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1610 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1552
>gb|AY727651.1| Arabidopsis thaliana ecotype Kas-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4819
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727652.1| Arabidopsis thaliana ecotype Li-3 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4805
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727653.1| Arabidopsis thaliana ecotype Lu-1 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4832
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1730 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1671
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1670 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1611
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1610 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1552
>gb|AY727654.1| Arabidopsis thaliana ecotype Mt-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4807
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727655.1| Arabidopsis thaliana ecotype PLA-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4822
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727656.1| Arabidopsis thaliana ecotype Pog-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4805
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727657.1| Arabidopsis thaliana ecotype Tsu-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4749
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727658.1| Arabidopsis thaliana ecotype PHW-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4803
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727659.1| Arabidopsis thaliana ecotype PHW-33 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4803
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727660.1| Arabidopsis thaliana ecotype Kondara SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4805
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727661.1| Arabidopsis thaliana ecotype An-2 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4803
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727662.1| Arabidopsis thaliana ecotype Br-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4834
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1730 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1671
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1670 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1611
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1610 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1552
>gb|AY727663.1| Arabidopsis thaliana ecotype Cha-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4814
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1730 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1671
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1670 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1611
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1610 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1552
>gb|AY727664.1| Arabidopsis thaliana ecotype Di-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4829
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727665.1| Arabidopsis thaliana ecotype Est-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4749
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727666.1| Arabidopsis thaliana ecotype Kl-5 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4805
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727667.1| Arabidopsis thaliana ecotype Ko-2 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4803
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727668.1| Arabidopsis thaliana ecotype Lip-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4838
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1553
>gb|AY727669.1| Arabidopsis thaliana ecotype 9481B SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4834
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 1733 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1674
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 1673 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1614
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 1613 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 1555
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
||||||||||||||||||||||| ||||| || ||||||||| ||| || || |||||
Sbjct: 17827905 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 17827846
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||| || | || |||||||| || || |||||||| | || ||||| || ||||||
Sbjct: 17827845 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 17827786
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| |||||||| || | ||| ||||| ||||| ||||||||
Sbjct: 17827785 aaagtgacttgacgattcgtagtgttctctatcctctttatctctatcttccctctccc 17827727
>gb|M55550.1|ATHAGL1A Arabidopsis thaliana transcription factor (AGL1), complete cds
Length = 895
Score = 63.9 bits (32), Expect = 6e-008
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 790 ttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccg 849
||||||||||| ||||| || | |||||||||||||||||||||| ||||| |||||
Sbjct: 263 ttcttgtacctttcaattgtacccctcacactgttgttggcgtactcatagagacggcca 204
Query: 850 cggctggagaagacgacgag 869
|| ||||||||| ||||||
Sbjct: 203 cgagtggagaagatgacgag 184
>gb|AY086196.1| Arabidopsis thaliana clone 22339 mRNA, complete sequence
Length = 1202
Score = 63.9 bits (32), Expect = 6e-008
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 790 ttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccg 849
||||||||||| ||||| || | |||||||||||||||||||||| ||||| |||||
Sbjct: 578 ttcttgtacctttcaattgtacccctcacactgttgttggcgtactcatagagacggcca 519
Query: 850 cggctggagaagacgacgag 869
|| ||||||||| ||||||
Sbjct: 518 cgagtggagaagatgacgag 499
>ref|NM_115740.2| Arabidopsis thaliana SHP1 (SHATTERPROOF 1); DNA binding /
transcription factor AT3G58780 (SHP1) mRNA, complete cds
Length = 1209
Score = 63.9 bits (32), Expect = 6e-008
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 790 ttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccg 849
||||||||||| ||||| || | |||||||||||||||||||||| ||||| |||||
Sbjct: 578 ttcttgtacctttcaattgtacccctcacactgttgttggcgtactcatagagacggcca 519
Query: 850 cggctggagaagacgacgag 869
|| ||||||||| ||||||
Sbjct: 518 cgagtggagaagatgacgag 499
>emb|AX380953.1| Sequence 7 from Patent WO0210415
Length = 5497
Score = 61.9 bits (31), Expect = 2e-007
Identities = 142/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||| | |||||| ||||| || || ||||| |||||||||| ||| ||||| ||
Sbjct: 2297 ctgttgttagagtactcatagagacgaccacggctagagaagacgatgagtgcgacttca 2238
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|| || || || || ||||||||||| || |||||||||| || || | || |||||
Sbjct: 2237 gcatcacaaagaacagagagctcgtaagctttcttgagcaaaccatttctacgtttgcaa 2178
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| ||||||||||| || ||||| |||||||| ||||||||
Sbjct: 2177 aaagtgacttgacgattcgttgtgttctcgatccgtttgatttcgatctttcctctccc 2119
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 61.9 bits (31), Expect = 2e-007
Identities = 142/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||| | |||||| ||||| || || ||||| |||||||||| ||| ||||| ||
Sbjct: 6296902 ctgttgttagagtactcatagagacgaccacggctagagaagacgatgagtgcgacttca 6296843
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|| || || || || ||||||||||| || |||||||||| || || | || |||||
Sbjct: 6296842 gcatcacaaagaacagagagctcgtaagctttcttgagcaaaccatttctacgtttgcaa 6296783
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| ||||||||||| || ||||| |||||||| ||||||||
Sbjct: 6296782 aaagtgacttgacgattcgttgtgttctcgatccgtttgatttcgatctttcctctccc 6296724
>emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome 4, BAC clone F13C5 (ESSA project)
Length = 119111
Score = 61.9 bits (31), Expect = 2e-007
Identities = 142/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||| | |||||| ||||| || || ||||| |||||||||| ||| ||||| ||
Sbjct: 48915 ctgttgttagagtactcatagagacgaccacggctagagaagacgatgagtgcgacttca 48856
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|| || || || || ||||||||||| || |||||||||| || || | || |||||
Sbjct: 48855 gcatcacaaagaacagagagctcgtaagctttcttgagcaaaccatttctacgtttgcaa 48796
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| ||||||||||| || ||||| |||||||| ||||||||
Sbjct: 48795 aaagtgacttgacgattcgttgtgttctcgatccgtttgatttcgatctttcctctccc 48737
>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
Length = 199075
Score = 61.9 bits (31), Expect = 2e-007
Identities = 142/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||| | |||||| ||||| || || ||||| |||||||||| ||| ||||| ||
Sbjct: 162285 ctgttgttagagtactcatagagacgaccacggctagagaagacgatgagtgcgacttca 162226
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|| || || || || ||||||||||| || |||||||||| || || | || |||||
Sbjct: 162225 gcatcacaaagaacagagagctcgtaagctttcttgagcaaaccatttctacgtttgcaa 162166
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| ||||||||||| || ||||| |||||||| ||||||||
Sbjct: 162165 aaagtgacttgacgattcgttgtgttctcgatccgtttgatttcgatctttcctctccc 162107
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 61.9 bits (31), Expect = 2e-007
Identities = 142/179 (79%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||| | |||||| ||||| || || ||||| |||||||||| ||| ||||| ||
Sbjct: 10384157 ctgttgttagagtactcatagagacgaccacggctagagaagacgatgagtgcgacttca 10384098
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|| || || || || ||||||||||| || |||||||||| || || | || |||||
Sbjct: 10384097 gcatcacaaagaacagagagctcgtaagctttcttgagcaaaccatttctacgtttgcaa 10384038
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
|| || || || || |||| ||||||||||| || ||||| |||||||| ||||||||
Sbjct: 10384037 aaagtgacttgacgattcgttgtgttctcgatccgtttgatttcgatctttcctctccc 10383979
>gb|BT003841.1| Arabidopsis thaliana clone RAFL15-25-E19 (R20569) putative floral
homeodomain transcription factor (AGL5) (At2g42830)
mRNA, partial cds
Length = 640
Score = 58.0 bits (29), Expect = 4e-006
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 815 tcacactgttgttggcgtactcgtagaggcggc 847
|||||||||||||||||||||||||||| ||||
Sbjct: 33 tcacactgttgttggcgtactcgtagagacggc 1
>gb|CF773945.1|CF773945 AG_FSL_25A05 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 25A05, mRNA sequence
Length = 210
Score = 52.0 bits (26), Expect = 2e-004
Identities = 131/166 (78%)
Strand = Plus / Plus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
|||| ||||| || || ||||| ||||| |||| ||| ||||| || || || ||||| |
Sbjct: 1 actcatagagacgaccacggctagagaaaacgatgagtgcgacttcagcatcacagagaa 60
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
| ||||||||||| || |||||||||| || || | || ||||| || || || || |
Sbjct: 61 cagagagctcgtaagctttcttgagcaaaccatttctacgtttgcaaaaagtgacttgac 120
Query: 953 ggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctccc 998
| |||| ||||||||||| || ||||| |||||||| ||||||||
Sbjct: 121 gattcgttgtgttctcgatccgtttgatttcgatctttcctctccc 166
>emb|AX320929.1| Sequence 5 from Patent WO0179517
Length = 5622
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgag 869
||||||||||||||||| ||||| ||||| || ||||||||| ||||||
Sbjct: 2832 ctgttgttggcgtactcatagagacggccacgagtggagaagatgacgag 2783
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgag 869
||||||||||||||||| ||||| ||||| || ||||||||| ||||||
Sbjct: 21697921 ctgttgttggcgtactcatagagacggccacgagtggagaagatgacgag 21697872
>gb|AY727622.1| Arabidopsis thaliana ecotype Ler-0 SHATTERPROOF1 (SHP1) gene,
complete cds
Length = 4594
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgag 869
||||||||||||||||| ||||| ||||| || ||||||||| ||||||
Sbjct: 2142 ctgttgttggcgtactcatagagacggccacgagtggagaagatgacgag 2093
>gb|AY727623.1| Arabidopsis thaliana ecotype Wassilewskija SHATTERPROOF1 (SHP1) gene,
complete cds
Length = 4598
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgag 869
||||||||||||||||| ||||| ||||| || ||||||||| ||||||
Sbjct: 2142 ctgttgttggcgtactcatagagacggccacgagtggagaagatgacgag 2093
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 447,312
Number of Sequences: 1013581
Number of extensions: 447312
Number of successful extensions: 31895
Number of sequences better than 0.5: 100
Number of HSP's better than 0.5 without gapping: 99
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 30488
Number of HSP's gapped (non-prelim): 1400
length of query: 1245
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1225
effective length of database: 888,669,252
effective search space: 1088619833700
effective search space used: 1088619833700
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)