BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3642920.2.1
(570 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|B22304.1|B22304 F18I4TR IGF Arabidopsis thaliana genomic... 70 5e-010
gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome II... 70 5e-010
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 70 5e-010
gb|AY839934.1| Arabidopsis thaliana glycosyl transferase fa... 70 5e-010
ref|NM_110969.2| Arabidopsis thaliana transferase, transfer... 70 5e-010
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 70 5e-010
gb|T76284.1|T76284 11062 Lambda-PRL2 Arabidopsis thaliana c... 58 2e-006
gb|BT005899.1| Arabidopsis thaliana At5g15470 gene, complet... 52 1e-004
emb|BX830067.1|CNS0A1RY Arabidopsis thaliana Full-length cD... 52 1e-004
dbj|AK118651.1| Arabidopsis thaliana At5g15470 mRNA for unk... 52 1e-004
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 52 1e-004
emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome... 52 1e-004
ref|NM_121551.3| Arabidopsis thaliana transferase, transfer... 52 1e-004
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 52 1e-004
gb|AQ010596.1|AQ010596 F26H5TRC IGF Arabidopsis thaliana ge... 46 0.007
gb|CL506075.1|CL506075 SAIL_760_D04.v1 SAIL Collection Arab... 44 0.026
emb|AL952385.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.026
emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3... 44 0.026
gb|BH173133.1|BH173133 SALK_000091 Arabidopsis thaliana TDN... 40 0.40
gb|CC054262.1|CC054262 SALK_055599.43.95.x Arabidopsis thal... 40 0.40
gb|AV783162.1|AV783162 AV783162 RAFL5 Arabidopsis thaliana ... 40 0.40
gb|AY035019.1| Arabidopsis thaliana unknown protein (At2g20... 40 0.40
gb|AY059085.1| Arabidopsis thaliana unknown protein (At2g20... 40 0.40
gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H1... 40 0.40
dbj|AK176863.1| Arabidopsis thaliana mRNA, complete cds, cl... 40 0.40
ref|NM_127647.2| Arabidopsis thaliana transferase, transfer... 40 0.40
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 40 0.40
>gb|B22304.1|B22304 F18I4TR IGF Arabidopsis thaliana genomic clone F18I4, DNA sequence
Length = 399
Score = 69.9 bits (35), Expect = 5e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 90 attgttttccatgttattactgataaaaagacctatcctgccatgcattcatggtttgct 149
||||| ||||||||||| || || || || |||||| | | |||||||| ||||||||
Sbjct: 193 attgtcttccatgttatcacagacaagaaaacctatgcgggtatgcattcttggtttgca 252
Query: 150 ttaaattctctcagtcctgctattgttgaggtgaaaggtgttcatcaatttgattggtta 209
| |||||| | |||||| |||||||| |||||| | |||||||| ||||||||||||
Sbjct: 253 ctcaattctgttgctcctgcgattgttgaagtgaaaagcgttcatcagtttgattggtta 312
Query: 210 acacaagaaaatgttcctgtacttgaa 236
||| ||| |||||||| || ||||||
Sbjct: 313 acaagagagaatgttccagttcttgaa 339
>gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC T4P13 genomic sequence,
complete sequence
Length = 93735
Score = 69.9 bits (35), Expect = 5e-010
Identities = 119/147 (80%)
Strand = Plus / Minus
Query: 90 attgttttccatgttattactgataaaaagacctatcctgccatgcattcatggtttgct 149
||||| ||||||||||| || || || || |||||| | | |||||||| ||||||||
Sbjct: 86376 attgtcttccatgttatcacagacaagaaaacctatgcgggtatgcattcttggtttgca 86317
Query: 150 ttaaattctctcagtcctgctattgttgaggtgaaaggtgttcatcaatttgattggtta 209
| |||||| | |||||| |||||||| |||||| | |||||||| ||||||||||||
Sbjct: 86316 ctcaattctgttgctcctgcgattgttgaagtgaaaagcgttcatcagtttgattggtta 86257
Query: 210 acacaagaaaatgttcctgtacttgaa 236
||| ||| |||||||| || ||||||
Sbjct: 86256 acaagagagaatgttccagttcttgaa 86230
Score = 44.1 bits (22), Expect = 0.026
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 465 ctttgggatattgatctatctgggaaggttaatggcgctgttgagacttg 514
|||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 85794 ctttgggatattgaccttaacgggaaggttaatggagctgtggagacttg 85745
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 69.9 bits (35), Expect = 5e-010
Identities = 119/147 (80%)
Strand = Plus / Minus
Query: 90 attgttttccatgttattactgataaaaagacctatcctgccatgcattcatggtttgct 149
||||| ||||||||||| || || || || |||||| | | |||||||| ||||||||
Sbjct: 89812 attgtcttccatgttatcacagacaagaaaacctatgcgggtatgcattcttggtttgca 89753
Query: 150 ttaaattctctcagtcctgctattgttgaggtgaaaggtgttcatcaatttgattggtta 209
| |||||| | |||||| |||||||| |||||| | |||||||| ||||||||||||
Sbjct: 89752 ctcaattctgttgctcctgcgattgttgaagtgaaaagcgttcatcagtttgattggtta 89693
Query: 210 acacaagaaaatgttcctgtacttgaa 236
||| ||| |||||||| || ||||||
Sbjct: 89692 acaagagagaatgttccagttcttgaa 89666
Score = 44.1 bits (22), Expect = 0.026
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 185 aggtgttcatcaatttgattgg 206
||||||||||||||||||||||
Sbjct: 17505695 aggtgttcatcaatttgattgg 17505716
Score = 44.1 bits (22), Expect = 0.026
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 465 ctttgggatattgatctatctgggaaggttaatggcgctgttgagacttg 514
|||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 89230 ctttgggatattgaccttaacgggaaggttaatggagctgtggagacttg 89181
>gb|AY839934.1| Arabidopsis thaliana glycosyl transferase family 8 protein-like gene,
complete sequence
Length = 3540
Score = 69.9 bits (35), Expect = 5e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 90 attgttttccatgttattactgataaaaagacctatcctgccatgcattcatggtttgct 149
||||| ||||||||||| || || || || |||||| | | |||||||| ||||||||
Sbjct: 1856 attgtcttccatgttatcacagacaagaaaacctatgcgggtatgcattcttggtttgca 1915
Query: 150 ttaaattctctcagtcctgctattgttgaggtgaaaggtgttcatcaatttgattggtta 209
| |||||| | |||||| |||||||| |||||| | |||||||| ||||||||||||
Sbjct: 1916 ctcaattctgttgctcctgcgattgttgaagtgaaaagcgttcatcagtttgattggtta 1975
Query: 210 acacaagaaaatgttcctgtacttgaa 236
||| ||| |||||||| || ||||||
Sbjct: 1976 acaagagagaatgttccagttcttgaa 2002
Score = 44.1 bits (22), Expect = 0.026
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 465 ctttgggatattgatctatctgggaaggttaatggcgctgttgagacttg 514
|||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 2438 ctttgggatattgaccttaacgggaaggttaatggagctgtggagacttg 2487
>ref|NM_110969.2| Arabidopsis thaliana transferase, transferring glycosyl groups /
transferase, transferring hexosyl groups AT3G01040 mRNA,
complete cds
Length = 2480
Score = 69.9 bits (35), Expect = 5e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 90 attgttttccatgttattactgataaaaagacctatcctgccatgcattcatggtttgct 149
||||| ||||||||||| || || || || |||||| | | |||||||| ||||||||
Sbjct: 1144 attgtcttccatgttatcacagacaagaaaacctatgcgggtatgcattcttggtttgca 1203
Query: 150 ttaaattctctcagtcctgctattgttgaggtgaaaggtgttcatcaatttgattggtta 209
| |||||| | |||||| |||||||| |||||| | |||||||| ||||||||||||
Sbjct: 1204 ctcaattctgttgctcctgcgattgttgaagtgaaaagcgttcatcagtttgattggtta 1263
Query: 210 acacaagaaaatgttcctgtacttgaa 236
||| ||| |||||||| || ||||||
Sbjct: 1264 acaagagagaatgttccagttcttgaa 1290
Score = 44.1 bits (22), Expect = 0.026
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 465 ctttgggatattgatctatctgggaaggttaatggcgctgttgagacttg 514
|||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 1522 ctttgggatattgaccttaacgggaaggttaatggagctgtggagacttg 1571
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 69.9 bits (35), Expect = 5e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 90 attgttttccatgttattactgataaaaagacctatcctgccatgcattcatggtttgct 149
||||| ||||||||||| || || || || |||||| | | |||||||| ||||||||
Sbjct: 10796 attgtcttccatgttatcacagacaagaaaacctatgcgggtatgcattcttggtttgca 10855
Query: 150 ttaaattctctcagtcctgctattgttgaggtgaaaggtgttcatcaatttgattggtta 209
| |||||| | |||||| |||||||| |||||| | |||||||| ||||||||||||
Sbjct: 10856 ctcaattctgttgctcctgcgattgttgaagtgaaaagcgttcatcagtttgattggtta 10915
Query: 210 acacaagaaaatgttcctgtacttgaa 236
||| ||| |||||||| || ||||||
Sbjct: 10916 acaagagagaatgttccagttcttgaa 10942
Score = 44.1 bits (22), Expect = 0.026
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 185 aggtgttcatcaatttgattgg 206
||||||||||||||||||||||
Sbjct: 17552633 aggtgttcatcaatttgattgg 17552654
Score = 44.1 bits (22), Expect = 0.026
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 465 ctttgggatattgatctatctgggaaggttaatggcgctgttgagacttg 514
|||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 11378 ctttgggatattgaccttaacgggaaggttaatggagctgtggagacttg 11427
>gb|T76284.1|T76284 11062 Lambda-PRL2 Arabidopsis thaliana cDNA clone 150D17T7, mRNA
sequence
Length = 382
Score = 58.0 bits (29), Expect = 2e-006
Identities = 117/147 (79%)
Strand = Plus / Plus
Query: 90 attgttttccatgttattactgataaaaagacctatcctgccatgcattcatggtttgct 149
||||| ||||||||||| || || || || |||||| | | |||||||| ||||||||
Sbjct: 7 attgtcttccatgttatcacagacaagaaaacctatgcgggtatgcattcttggtttgca 66
Query: 150 ttaaattctctcagtcctgctattgttgaggtgaaaggtgttcatcaatttgattggtta 209
| |||||| | |||||| ||| |||| |||||| | |||||||| ||| ||||||||
Sbjct: 67 ctcaattctgttgctcctgcgattnttgaagtgaaaagcgttcatcagtttnattggtta 126
Query: 210 acacaagaaaatgttcctgtacttgaa 236
||| ||| |||||||| || ||||||
Sbjct: 127 acaagagagaatgttccagttcttgaa 153
>gb|BT005899.1| Arabidopsis thaliana At5g15470 gene, complete cds
Length = 1599
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 171 attgttgaggtgaaaggtgttcatcaatttgattggtt 208
||||||||||| |||||||||||||| ||||| |||||
Sbjct: 787 attgttgaggttaaaggtgttcatcagtttgactggtt 824
Score = 40.1 bits (20), Expect = 0.40
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 462 ccactttgggatattgatctatctgggaaggttaatggcgctgttgagacttgcagaggt 521
|||||||||||| |||| || ||| ||||| ||||| || || ||||||||||| |||
Sbjct: 1081 ccactttgggatgttgacctcggtggtaaggtcaatggggcagtagagacttgcaggggt 1140
Query: 522 ggagatagttgggtgatgtc 541
| |||| |||||||||||
Sbjct: 1141 gaagatgaatgggtgatgtc 1160
>emb|BX830067.1|CNS0A1RY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB57ZD10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2223
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 171 attgttgaggtgaaaggtgttcatcaatttgattggtt 208
||||||||||| |||||||||||||| ||||| |||||
Sbjct: 1153 attgttgaggttaaaggtgttcatcagtttgactggtt 1190
Score = 40.1 bits (20), Expect = 0.40
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 462 ccactttgggatattgatctatctgggaaggttaatggcgctgttgagacttgcagaggt 521
|||||||||||| |||| || ||| ||||| ||||| || || ||||||||||| |||
Sbjct: 1447 ccactttgggatgttgacctcggtggtaaggtcaatggggcagtagagacttgcaggggt 1506
Query: 522 ggagatagttgggtgatgtc 541
| |||| |||||||||||
Sbjct: 1507 gaagatgaatgggtgatgtc 1526
>dbj|AK118651.1| Arabidopsis thaliana At5g15470 mRNA for unknown protein, complete
cds, clone: RAFL19-91-I16
Length = 2595
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 171 attgttgaggtgaaaggtgttcatcaatttgattggtt 208
||||||||||| |||||||||||||| ||||| |||||
Sbjct: 1361 attgttgaggttaaaggtgttcatcagtttgactggtt 1398
Score = 40.1 bits (20), Expect = 0.40
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 462 ccactttgggatattgatctatctgggaaggttaatggcgctgttgagacttgcagaggt 521
|||||||||||| |||| || ||| ||||| ||||| || || ||||||||||| |||
Sbjct: 1655 ccactttgggatgttgacctcggtggtaaggtcaatggggcagtagagacttgcaggggt 1714
Query: 522 ggagatagttgggtgatgtc 541
| |||| |||||||||||
Sbjct: 1715 gaagatgaatgggtgatgtc 1734
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 171 attgttgaggtgaaaggtgttcatcaatttgattggtt 208
||||||||||| |||||||||||||| ||||| |||||
Sbjct: 4805406 attgttgaggttaaaggtgttcatcagtttgactggtt 4805369
Score = 40.1 bits (20), Expect = 0.40
Identities = 65/80 (81%)
Strand = Plus / Minus
Query: 462 ccactttgggatattgatctatctgggaaggttaatggcgctgttgagacttgcagaggt 521
|||||||||||| |||| || ||| ||||| ||||| || || ||||||||||| |||
Sbjct: 4805024 ccactttgggatgttgacctcggtggtaaggtcaatggggcagtagagacttgcaggggt 4804965
Query: 522 ggagatagttgggtgatgtc 541
| |||| |||||||||||
Sbjct: 4804964 gaagatgaatgggtgatgtc 4804945
>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA project)
Length = 90176
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 171 attgttgaggtgaaaggtgttcatcaatttgattggtt 208
||||||||||| |||||||||||||| ||||| |||||
Sbjct: 28208 attgttgaggttaaaggtgttcatcagtttgactggtt 28171
Score = 40.1 bits (20), Expect = 0.40
Identities = 65/80 (81%)
Strand = Plus / Minus
Query: 462 ccactttgggatattgatctatctgggaaggttaatggcgctgttgagacttgcagaggt 521
|||||||||||| |||| || ||| ||||| ||||| || || ||||||||||| |||
Sbjct: 27826 ccactttgggatgttgacctcggtggtaaggtcaatggggcagtagagacttgcaggggt 27767
Query: 522 ggagatagttgggtgatgtc 541
| |||| |||||||||||
Sbjct: 27766 gaagatgaatgggtgatgtc 27747
>ref|NM_121551.3| Arabidopsis thaliana transferase, transferring glycosyl groups /
transferase, transferring hexosyl groups AT5G15470 mRNA,
complete cds
Length = 2596
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 171 attgttgaggtgaaaggtgttcatcaatttgattggtt 208
||||||||||| |||||||||||||| ||||| |||||
Sbjct: 1361 attgttgaggttaaaggtgttcatcagtttgactggtt 1398
Score = 40.1 bits (20), Expect = 0.40
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 462 ccactttgggatattgatctatctgggaaggttaatggcgctgttgagacttgcagaggt 521
|||||||||||| |||| || ||| ||||| ||||| || || ||||||||||| |||
Sbjct: 1655 ccactttgggatgttgacctcggtggtaaggtcaatggggcagtagagacttgcaggggt 1714
Query: 522 ggagatagttgggtgatgtc 541
| |||| |||||||||||
Sbjct: 1715 gaagatgaatgggtgatgtc 1734
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 171 attgttgaggtgaaaggtgttcatcaatttgattggtt 208
||||||||||| |||||||||||||| ||||| |||||
Sbjct: 5022433 attgttgaggttaaaggtgttcatcagtttgactggtt 5022396
Score = 40.1 bits (20), Expect = 0.40
Identities = 65/80 (81%)
Strand = Plus / Minus
Query: 462 ccactttgggatattgatctatctgggaaggttaatggcgctgttgagacttgcagaggt 521
|||||||||||| |||| || ||| ||||| ||||| || || ||||||||||| |||
Sbjct: 5022051 ccactttgggatgttgacctcggtggtaaggtcaatggggcagtagagacttgcaggggt 5021992
Query: 522 ggagatagttgggtgatgtc 541
| |||| |||||||||||
Sbjct: 5021991 gaagatgaatgggtgatgtc 5021972
>gb|AQ010596.1|AQ010596 F26H5TRC IGF Arabidopsis thaliana genomic clone F26H5, DNA sequence
Length = 292
Score = 46.1 bits (23), Expect = 0.007
Identities = 98/123 (79%)
Strand = Plus / Plus
Query: 90 attgttttccatgttattactgataaaaagacctatcctgccatgcattcatggtttgct 149
||||| ||||||||||| || || || || |||||| | | |||||||| ||||||||
Sbjct: 121 attgtcttccatgttatcacagacaagaaaacctatgcgggtatgcattcttggtttgca 180
Query: 150 ttaaattctctcagtcctgctattgttgaggtgaaaggtgttcatcaatttgattggtta 209
| |||||| | |||||| |||||||| |||||| | |||||||| ||||||||||
Sbjct: 181 ctcaattctgttgctcctgcgattgttgaagtgaaaagcgttcatcagcatgattggtta 240
Query: 210 aca 212
|||
Sbjct: 241 aca 243
>gb|CL506075.1|CL506075 SAIL_760_D04.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_760_D04.v1, DNA sequence
Length = 918
Score = 44.1 bits (22), Expect = 0.026
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 185 aggtgttcatcaatttgattgg 206
||||||||||||||||||||||
Sbjct: 143 aggtgttcatcaatttgattgg 122
>emb|AL952385.1| Arabidopsis thaliana T-DNA flanking sequence GK-343A01-016164,
genomic survey sequence
Length = 180
Score = 44.1 bits (22), Expect = 0.026
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 185 aggtgttcatcaatttgattgg 206
||||||||||||||||||||||
Sbjct: 46 aggtgttcatcaatttgattgg 67
>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2
Length = 101154
Score = 44.1 bits (22), Expect = 0.026
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 185 aggtgttcatcaatttgattgg 206
||||||||||||||||||||||
Sbjct: 54996 aggtgttcatcaatttgattgg 55017
>gb|BH173133.1|BH173133 SALK_000091 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_000091, DNA sequence
Length = 441
Score = 40.1 bits (20), Expect = 0.40
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 462 ccactttgggatattgatctatctgggaaggttaatggcgctgttgagacttgcagaggt 521
|||||||||||| |||| || ||| ||||| ||||| || || ||||||||||| |||
Sbjct: 284 ccactttgggatgttgacctcggtggtaaggtcaatggggcagtagagacttgcaggggt 343
Query: 522 ggagatagttgggtgatgtc 541
| |||| |||||||||||
Sbjct: 344 gaagatgaatgggtgatgtc 363
>gb|CC054262.1|CC054262 SALK_055599.43.95.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_055599.43.95.x,
DNA sequence
Length = 411
Score = 40.1 bits (20), Expect = 0.40
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 227 tgtacttgaatcaatagaaa 246
||||||||||||||||||||
Sbjct: 234 tgtacttgaatcaatagaaa 215
>gb|AV783162.1|AV783162 AV783162 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-07-B15 3',
mRNA sequence
Length = 689
Score = 40.1 bits (20), Expect = 0.40
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 423 tttcttgatgatgatgttgt 442
||||||||||||||||||||
Sbjct: 680 tttcttgatgatgatgttgt 661
>gb|AY035019.1| Arabidopsis thaliana unknown protein (At2g20810) mRNA, complete cds
Length = 1909
Score = 40.1 bits (20), Expect = 0.40
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 423 tttcttgatgatgatgttgt 442
||||||||||||||||||||
Sbjct: 1215 tttcttgatgatgatgttgt 1234
>gb|AY059085.1| Arabidopsis thaliana unknown protein (At2g20810) mRNA, complete cds
Length = 1642
Score = 40.1 bits (20), Expect = 0.40
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 423 tttcttgatgatgatgttgt 442
||||||||||||||||||||
Sbjct: 1081 tttcttgatgatgatgttgt 1100
>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete
sequence
Length = 129667
Score = 40.1 bits (20), Expect = 0.40
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 423 tttcttgatgatgatgttgt 442
||||||||||||||||||||
Sbjct: 72618 tttcttgatgatgatgttgt 72599
>dbj|AK176863.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-42-C07
Length = 1945
Score = 40.1 bits (20), Expect = 0.40
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 423 tttcttgatgatgatgttgt 442
||||||||||||||||||||
Sbjct: 1237 tttcttgatgatgatgttgt 1256
>ref|NM_127647.2| Arabidopsis thaliana transferase, transferring glycosyl groups /
transferase, transferring hexosyl groups AT2G20810 mRNA,
complete cds
Length = 1915
Score = 40.1 bits (20), Expect = 0.40
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 423 tttcttgatgatgatgttgt 442
||||||||||||||||||||
Sbjct: 1215 tttcttgatgatgatgttgt 1234
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 40.1 bits (20), Expect = 0.40
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 423 tttcttgatgatgatgttgt 442
||||||||||||||||||||
Sbjct: 8966161 tttcttgatgatgatgttgt 8966180
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 369,178
Number of Sequences: 1013581
Number of extensions: 369178
Number of successful extensions: 26495
Number of sequences better than 0.5: 27
Number of HSP's better than 0.5 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25277
Number of HSP's gapped (non-prelim): 1202
length of query: 570
length of database: 908,940,872
effective HSP length: 20
effective length of query: 550
effective length of database: 888,669,252
effective search space: 488768088600
effective search space used: 488768088600
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)