BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204680.2.1
(672 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA042169.1|AA042169 24490 CD4-13 Arabidopsis thaliana cD... 98 2e-018
gb|AV791096.1|AV791096 AV791096 RAFL7 Arabidopsis thaliana ... 98 2e-018
gb|AV799147.1|AV799147 AV799147 RAFL9 Arabidopsis thaliana ... 98 2e-018
gb|AV800150.1|AV800150 AV800150 RAFL9 Arabidopsis thaliana ... 98 2e-018
gb|BP631808.1|BP631808 BP631808 RAFL17 Arabidopsis thaliana... 98 2e-018
gb|BP636455.1|BP636455 BP636455 RAFL18 Arabidopsis thaliana... 98 2e-018
gb|BP785400.1|BP785400 BP785400 RAFL7 Arabidopsis thaliana ... 98 2e-018
gb|BP788186.1|BP788186 BP788186 RAFL7 Arabidopsis thaliana ... 98 2e-018
gb|BP789449.1|BP789449 BP789449 RAFL7 Arabidopsis thaliana ... 98 2e-018
gb|BP789689.1|BP789689 BP789689 RAFL7 Arabidopsis thaliana ... 98 2e-018
gb|BP791730.1|BP791730 BP791730 RAFL7 Arabidopsis thaliana ... 98 2e-018
gb|BP793919.1|BP793919 BP793919 RAFL7 Arabidopsis thaliana ... 98 2e-018
gb|Z29888.1|Z29888 ATTS2332 Perp-dry-seedA Arabidopsis thal... 98 2e-018
gb|AF370333.1| Arabidopsis thaliana putative betaine aldehy... 98 2e-018
gb|AY062987.1| Arabidopsis thaliana putative betaine aldehy... 98 2e-018
ref|NM_114686.2| Arabidopsis thaliana ALDH10A9; aldehyde de... 98 2e-018
gb|N95958.1|N95958 21143 CD4-14 Arabidopsis thaliana cDNA c... 92 1e-016
gb|BP580359.1|BP580359 BP580359 RAFL14 Arabidopsis thaliana... 90 6e-016
gb|BP631113.1|BP631113 BP631113 RAFL17 Arabidopsis thaliana... 90 6e-016
gb|BP636272.1|BP636272 BP636272 RAFL18 Arabidopsis thaliana... 90 6e-016
gb|BP620270.1|BP620270 BP620270 RAFL16 Arabidopsis thaliana... 86 9e-015
gb|AV783248.1|AV783248 AV783248 RAFL5 Arabidopsis thaliana ... 84 4e-014
gb|BP584731.1|BP584731 BP584731 RAFL14 Arabidopsis thaliana... 84 4e-014
gb|BP612475.1|BP612475 BP612475 RAFL16 Arabidopsis thaliana... 84 4e-014
gb|BP655656.1|BP655656 BP655656 RAFL19 Arabidopsis thaliana... 82 1e-013
gb|BP632539.1|BP632539 BP632539 RAFL17 Arabidopsis thaliana... 76 9e-012
gb|AV786136.1|AV786136 AV786136 RAFL6 Arabidopsis thaliana ... 74 3e-011
gb|BP626631.1|BP626631 BP626631 RAFL17 Arabidopsis thaliana... 74 3e-011
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 68 2e-009
emb|AL096856.1|ATT24C20 Arabidopsis thaliana DNA chromosome... 68 2e-009
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 68 2e-009
gb|BP575643.1|BP575643 BP575643 RAFL14 Arabidopsis thaliana... 64 3e-008
gb|BP591744.1|BP591744 BP591744 RAFL15 Arabidopsis thaliana... 64 3e-008
emb|BX814003.1|CNS0ADO4 Arabidopsis thaliana Full-length cD... 64 3e-008
gb|T46358.1|T46358 9621 Lambda-PRL2 Arabidopsis thaliana cD... 62 1e-007
gb|BP565560.1|BP565560 BP565560 RAFL14 Arabidopsis thaliana... 62 1e-007
gb|BP632820.1|BP632820 BP632820 RAFL17 Arabidopsis thaliana... 62 1e-007
emb|BX823398.1|CNS0A7FR Arabidopsis thaliana Full-length cD... 62 1e-007
gb|BP565479.1|BP565479 BP565479 RAFL14 Arabidopsis thaliana... 60 5e-007
gb|AA586226.1|AA586226 28875 Lambda-PRL2 Arabidopsis thalia... 58 2e-006
gb|AA651436.1|AA651436 31550 Lambda-PRL2 Arabidopsis thalia... 58 2e-006
gb|AV789345.1|AV789345 AV789345 RAFL6 Arabidopsis thaliana ... 58 2e-006
gb|AV792807.1|AV792807 AV792807 RAFL7 Arabidopsis thaliana ... 58 2e-006
gb|AV800211.1|AV800211 AV800211 RAFL9 Arabidopsis thaliana ... 58 2e-006
gb|AV518932.1|AV518932 AV518932 Arabidopsis thaliana aboveg... 58 2e-006
gb|AV532020.1|AV532020 AV532020 Arabidopsis thaliana flower... 58 2e-006
gb|AV537751.1|AV537751 AV537751 Arabidopsis thaliana roots ... 58 2e-006
gb|CK121744.1|CK121744 201a08.p1 AtM1 Arabidopsis thaliana ... 58 2e-006
gb|BP575980.1|BP575980 BP575980 RAFL14 Arabidopsis thaliana... 58 2e-006
gb|BP577063.1|BP577063 BP577063 RAFL14 Arabidopsis thaliana... 58 2e-006
gb|BP579190.1|BP579190 BP579190 RAFL14 Arabidopsis thaliana... 58 2e-006
gb|BP581524.1|BP581524 BP581524 RAFL14 Arabidopsis thaliana... 58 2e-006
gb|BP594053.1|BP594053 BP594053 RAFL15 Arabidopsis thaliana... 58 2e-006
gb|BP597919.1|BP597919 BP597919 RAFL16 Arabidopsis thaliana... 58 2e-006
gb|BP598322.1|BP598322 BP598322 RAFL16 Arabidopsis thaliana... 58 2e-006
gb|BP599421.1|BP599421 BP599421 RAFL16 Arabidopsis thaliana... 58 2e-006
gb|BP601244.1|BP601244 BP601244 RAFL16 Arabidopsis thaliana... 58 2e-006
gb|BP628330.1|BP628330 BP628330 RAFL17 Arabidopsis thaliana... 58 2e-006
gb|BP650560.1|BP650560 BP650560 RAFL19 Arabidopsis thaliana... 58 2e-006
gb|BP671873.1|BP671873 BP671873 RAFL21 Arabidopsis thaliana... 58 2e-006
gb|BP780945.1|BP780945 BP780945 RAFL7 Arabidopsis thaliana ... 58 2e-006
gb|BP787250.1|BP787250 BP787250 RAFL7 Arabidopsis thaliana ... 58 2e-006
gb|BP817965.1|BP817965 BP817965 RAFL19 Arabidopsis thaliana... 58 2e-006
gb|BP837650.1|BP837650 BP837650 RAFL19 Arabidopsis thaliana... 58 2e-006
gb|AY093071.1| Arabidopsis thaliana similar to betaine alde... 58 2e-006
gb|AY087395.1| Arabidopsis thaliana clone 34926 mRNA, compl... 58 2e-006
gb|BT008872.1| Arabidopsis thaliana At1g74920 mRNA, complet... 58 2e-006
dbj|AK220905.1| Arabidopsis thaliana mRNA for betaine aldeh... 58 2e-006
dbj|AK222025.1| Arabidopsis thaliana mRNA for betaine aldeh... 58 2e-006
ref|NM_106150.2| Arabidopsis thaliana ALDH10A8; aldehyde de... 58 2e-006
gb|R90254.1|R90254 16609 Lambda-PRL2 Arabidopsis thaliana c... 56 8e-006
gb|AV813977.1|AV813977 AV813977 RAFL9 Arabidopsis thaliana ... 54 3e-005
gb|BP573802.1|BP573802 BP573802 RAFL14 Arabidopsis thaliana... 54 3e-005
gb|BP591372.1|BP591372 BP591372 RAFL15 Arabidopsis thaliana... 54 3e-005
gb|BP599404.1|BP599404 BP599404 RAFL16 Arabidopsis thaliana... 54 3e-005
gb|BP619533.1|BP619533 BP619533 RAFL16 Arabidopsis thaliana... 54 3e-005
gb|BP646724.1|BP646724 BP646724 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP649934.1|BP649934 BP649934 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP788626.1|BP788626 BP788626 RAFL7 Arabidopsis thaliana ... 54 3e-005
gb|CL492381.1|CL492381 SAIL_565_H07.v2 SAIL Collection Arab... 50 5e-004
gb|BP618182.1|BP618182 BP618182 RAFL16 Arabidopsis thaliana... 50 5e-004
gb|BP643545.1|BP643545 BP643545 RAFL19 Arabidopsis thaliana... 50 5e-004
gb|BP659178.1|BP659178 BP659178 RAFL19 Arabidopsis thaliana... 50 5e-004
gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F... 50 5e-004
gb|AC013258.5|AC013258 Arabidopsis thaliana chromosome 1 BA... 50 5e-004
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 50 5e-004
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 50 5e-004
gb|BP604583.1|BP604583 BP604583 RAFL16 Arabidopsis thaliana... 48 0.002
gb|BP640251.1|BP640251 BP640251 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP644564.1|BP644564 BP644564 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP646298.1|BP646298 BP646298 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP648873.1|BP648873 BP648873 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP573904.1|BP573904 BP573904 RAFL14 Arabidopsis thaliana... 46 0.008
gb|BP655451.1|BP655451 BP655451 RAFL19 Arabidopsis thaliana... 46 0.008
gb|BP659169.1|BP659169 BP659169 RAFL19 Arabidopsis thaliana... 46 0.008
gb|AV789379.1|AV789379 AV789379 RAFL6 Arabidopsis thaliana ... 44 0.031
gb|AA404840.1|AA404840 28224 Lambda-PRL2 Arabidopsis thalia... 42 0.12
gb|BP569312.1|BP569312 BP569312 RAFL14 Arabidopsis thaliana... 42 0.12
gb|BP581681.1|BP581681 BP581681 RAFL14 Arabidopsis thaliana... 42 0.12
gb|AV790860.1|AV790860 AV790860 RAFL7 Arabidopsis thaliana ... 40 0.48
gb|BP641360.1|BP641360 BP641360 RAFL19 Arabidopsis thaliana... 40 0.48
>gb|AA042169.1|AA042169 24490 CD4-13 Arabidopsis thaliana cDNA clone E3E2T7, mRNA sequence
Length = 545
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 244 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 185
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 184 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 125
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 124 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 72
>gb|AV791096.1|AV791096 AV791096 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-08-N03 3',
mRNA sequence
Length = 426
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 318 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 259
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 258 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 199
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 198 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 146
>gb|AV799147.1|AV799147 AV799147 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-18-N19 3',
mRNA sequence
Length = 415
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 312 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 253
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 252 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 193
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 192 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 140
>gb|AV800150.1|AV800150 AV800150 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-22-P08 3',
mRNA sequence
Length = 414
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 254 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 195
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 194 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 135
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 134 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 82
>gb|BP631808.1|BP631808 BP631808 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-24-O07 3',
mRNA sequence
Length = 352
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| ||||| ||||||||||||||||| ||||| || | ||| | ||||
Sbjct: 307 tgggtcaactgctctcaaccatgcttctgccaagctccatggggtggaaccaaacccagt 248
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 247 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 188
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 187 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 135
>gb|BP636455.1|BP636455 BP636455 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-04-J09 3',
mRNA sequence
Length = 431
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 296 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 237
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 236 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 177
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 176 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 124
>gb|BP785400.1|BP785400 BP785400 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-94-K24 3',
mRNA sequence
Length = 402
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 329 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 270
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 269 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 210
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 209 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 157
>gb|BP788186.1|BP788186 BP788186 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-32-J20 3',
mRNA sequence
Length = 416
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 312 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 253
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 252 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 193
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 192 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 140
>gb|BP789449.1|BP789449 BP789449 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-39-A17 3',
mRNA sequence
Length = 410
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 322 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 263
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 262 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 203
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 202 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 150
>gb|BP789689.1|BP789689 BP789689 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-40-B16 3',
mRNA sequence
Length = 406
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 312 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 253
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 252 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 193
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 192 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 140
>gb|BP791730.1|BP791730 BP791730 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-48-L04 3',
mRNA sequence
Length = 401
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 286 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 227
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 226 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 167
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 166 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 114
>gb|BP793919.1|BP793919 BP793919 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-58-D22 3',
mRNA sequence
Length = 420
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 287 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 228
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 227 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 168
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 167 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 115
>gb|Z29888.1|Z29888 ATTS2332 Perp-dry-seedA Arabidopsis thaliana cDNA clone PAP199 3',
mRNA sequence
Length = 406
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Plus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 89 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 148
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 149 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 208
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 209 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 261
>gb|AF370333.1| Arabidopsis thaliana putative betaine aldehyde dehydrogenase
(At3g48170) mRNA, complete cds
Length = 1721
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Plus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 1392 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 1451
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 1452 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 1511
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 1512 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 1564
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 202 tcaatggaaatctggagggaggaagtctttggtcc 236
||||||||||||||||| |||||||||||||||||
Sbjct: 1212 tcaatggaaatctggagagaggaagtctttggtcc 1246
>gb|AY062987.1| Arabidopsis thaliana putative betaine aldehyde dehydrogenase
(At3g48170) mRNA, complete cds
Length = 1543
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Plus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 1336 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 1395
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 1396 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 1455
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 1456 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 1508
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 202 tcaatggaaatctggagggaggaagtctttggtcc 236
||||||||||||||||| |||||||||||||||||
Sbjct: 1156 tcaatggaaatctggagagaggaagtctttggtcc 1190
>ref|NM_114686.2| Arabidopsis thaliana ALDH10A9; aldehyde dehydrogenase/ oxidoreductase
AT3G48170 (ALDH10A9) mRNA, complete cds
Length = 1722
Score = 97.6 bits (49), Expect = 2e-018
Identities = 142/173 (82%)
Strand = Plus / Plus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 1400 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 1459
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 1460 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 1519
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 1520 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 1572
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 202 tcaatggaaatctggagggaggaagtctttggtcc 236
||||||||||||||||| |||||||||||||||||
Sbjct: 1220 tcaatggaaatctggagagaggaagtctttggtcc 1254
>gb|N95958.1|N95958 21143 CD4-14 Arabidopsis thaliana cDNA clone F3F6T7, mRNA sequence
Length = 482
Score = 91.7 bits (46), Expect = 1e-016
Identities = 141/173 (81%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||| ||||||| ||||| || | ||| ||||||
Sbjct: 258 tgggtcaactgctctcagccatgcttctgcnaagctccatggggtggaaccaaacgcagt 199
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 198 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 139
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 138 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 86
>gb|BP580359.1|BP580359 BP580359 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-26-N04 3',
mRNA sequence
Length = 425
Score = 89.7 bits (45), Expect = 6e-016
Identities = 141/173 (81%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 312 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 253
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| | ||||| ||
Sbjct: 252 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtttgaagcaggtg 193
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 192 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 140
>gb|BP631113.1|BP631113 BP631113 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-22-G21 3',
mRNA sequence
Length = 370
Score = 89.7 bits (45), Expect = 6e-016
Identities = 141/173 (81%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 307 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 248
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| | ||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 247 ggatttggccctgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 188
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 187 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 135
>gb|BP636272.1|BP636272 BP636272 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-03-P16 3',
mRNA sequence
Length = 445
Score = 89.7 bits (45), Expect = 6e-016
Identities = 141/173 (81%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| ||||| ||||||||||||||||| ||||| || | ||| | ||||
Sbjct: 324 tgggtcaactgctctcaaccatgcttctgccaagctccatggggtggaaccaaacccagt 265
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| | ||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 264 ggatttggccctgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 205
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 204 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 152
>gb|BP620270.1|BP620270 BP620270 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-36-J17 3',
mRNA sequence
Length = 436
Score = 85.7 bits (43), Expect = 9e-015
Identities = 137/167 (82%), Gaps = 1/167 (0%)
Strand = Plus / Minus
Query: 388 aactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagtggattt 447
|||||||| || || ||||||||||||||||| ||||| || | ||| ||||||||||||
Sbjct: 320 aactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagtggattt 261
Query: 448 ggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtcacggag 507
|| ||||| | |||||| ||| | |||| |||||| |||| || ||||| || || ||
Sbjct: 260 ggccgtgaattgggagaatgggac-ttgagaactacttgagtgtgaagcaggtgactcag 202
Query: 508 tacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 201 tatatctctgatgaaccatggggatggtacaaacctccttccaagct 155
>gb|AV783248.1|AV783248 AV783248 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-07-N03 3',
mRNA sequence
Length = 699
Score = 83.8 bits (42), Expect = 4e-014
Identities = 142/174 (81%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 313 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 254
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 253 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 194
Query: 502 acgga-gtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| | ||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 193 actcaggtatatctctgatgaaccatggggatggtacaaacctccttccaagct 140
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 202 tcaatggaaatctggagggaggaagtctttggtcc 236
||||||||||||||||| |||||||||||||||||
Sbjct: 493 tcaatggaaatctggagagaggaagtctttggtcc 459
>gb|BP584731.1|BP584731 BP584731 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-47-K10 3',
mRNA sequence
Length = 433
Score = 83.8 bits (42), Expect = 4e-014
Identities = 142/174 (81%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 296 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 237
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 236 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 177
Query: 502 a-cggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
| | |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 176 agctcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 123
>gb|BP612475.1|BP612475 BP612475 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-89-K10 3',
mRNA sequence
Length = 427
Score = 83.8 bits (42), Expect = 4e-014
Identities = 142/174 (81%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 328 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 269
Query: 442 ggattt-ggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagt 500
|||||| || ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 268 ggatttgggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggt 209
Query: 501 cacggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 208 gactcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 155
>gb|BP655656.1|BP655656 BP655656 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-22-I23 3',
mRNA sequence
Length = 374
Score = 81.8 bits (41), Expect = 1e-013
Identities = 140/173 (80%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| | ||||
Sbjct: 322 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacccagt 263
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| ||||| | |||||| |||| |||| |||||| |||| || || || ||
Sbjct: 262 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaaccaggtg 203
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 202 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 150
>gb|BP632539.1|BP632539 BP632539 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-27-H17 3',
mRNA sequence
Length = 378
Score = 75.8 bits (38), Expect = 9e-012
Identities = 141/174 (81%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 313 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 254
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctga-gcgtcaagcaagt 500
|||||||| ||||| | |||||| |||| |||| |||||| ||| | || ||||| ||
Sbjct: 253 ggatttggccgtgaattgggagaatggggacttgagaactacttgaggtgtgaagcaggt 194
Query: 501 cacggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| | || ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 193 gactcactatatctctgatgaaccatggggatggtacaaacctccttccaagct 140
>gb|AV786136.1|AV786136 AV786136 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-69-N24 3',
mRNA sequence
Length = 413
Score = 73.8 bits (37), Expect = 3e-011
Identities = 139/173 (80%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||| ||||||||| ||||| || | ||| | ||||
Sbjct: 295 tgggtcaactgctctcagccatgcttctcccaagctccatggggtggaaccaaacccagt 236
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
|||||||| | ||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 235 ggatttggccctgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 176
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 175 actcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 123
>gb|BP626631.1|BP626631 BP626631 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-48-F06 3',
mRNA sequence
Length = 369
Score = 73.8 bits (37), Expect = 3e-011
Identities = 141/173 (81%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| | | ||| ||||||
Sbjct: 304 tgggtcaactgctctcagccatgcttctgccaagctccatggggtga-accaaacgcagt 246
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 501
| |||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 245 g-atttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 187
Query: 502 acggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || ||||||||||||||| | || ||||||||
Sbjct: 186 actcagtatatctctgatgaaccatggggatggtaccaacctccttccaagct 134
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 17750662 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 17750603
Query: 442 ggatttggacgtga 455
|||||||| |||||
Sbjct: 17750602 ggatttggccgtga 17750589
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 202 tcaatggaaatctggagggaggaagtctttggtcc 236
||||||||||||||||| |||||||||||||||||
Sbjct: 17751028 tcaatggaaatctggagagaggaagtctttggtcc 17750994
Score = 44.1 bits (22), Expect = 0.031
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 473 ttgataactacctgagcgtcaagcaagtcacggagtacatctctgatgagccgtggggat 532
|||| |||||| |||| || ||||| || || |||| ||||||||||| || |||||||
Sbjct: 17750422 ttgagaactacttgagtgtgaagcaggtgactcagtatatctctgatgaaccatggggat 17750363
Query: 533 ggtaccaatccccctccaagct 554
||||| || | || ||||||||
Sbjct: 17750362 ggtacaaacctccttccaagct 17750341
>emb|AL096856.1|ATT24C20 Arabidopsis thaliana DNA chromosome 3, BAC clone T24C20
Length = 103889
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 20328 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 20269
Query: 442 ggatttggacgtga 455
|||||||| |||||
Sbjct: 20268 ggatttggccgtga 20255
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 202 tcaatggaaatctggagggaggaagtctttggtcc 236
||||||||||||||||| |||||||||||||||||
Sbjct: 20694 tcaatggaaatctggagagaggaagtctttggtcc 20660
Score = 44.1 bits (22), Expect = 0.031
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 473 ttgataactacctgagcgtcaagcaagtcacggagtacatctctgatgagccgtggggat 532
|||| |||||| |||| || ||||| || || |||| ||||||||||| || |||||||
Sbjct: 20088 ttgagaactacttgagtgtgaagcaggtgactcagtatatctctgatgaaccatggggat 20029
Query: 533 ggtaccaatccccctccaagct 554
||||| || | || ||||||||
Sbjct: 20028 ggtacaaacctccttccaagct 20007
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| ||||||
Sbjct: 17797600 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 17797541
Query: 442 ggatttggacgtga 455
|||||||| |||||
Sbjct: 17797540 ggatttggccgtga 17797527
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 202 tcaatggaaatctggagggaggaagtctttggtcc 236
||||||||||||||||| |||||||||||||||||
Sbjct: 17797966 tcaatggaaatctggagagaggaagtctttggtcc 17797932
Score = 44.1 bits (22), Expect = 0.031
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 473 ttgataactacctgagcgtcaagcaagtcacggagtacatctctgatgagccgtggggat 532
|||| |||||| |||| || ||||| || || |||| ||||||||||| || |||||||
Sbjct: 17797360 ttgagaactacttgagtgtgaagcaggtgactcagtatatctctgatgaaccatggggat 17797301
Query: 533 ggtaccaatccccctccaagct 554
||||| || | || ||||||||
Sbjct: 17797300 ggtacaaacctccttccaagct 17797279
>gb|BP575643.1|BP575643 BP575643 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-13-G06 3',
mRNA sequence
Length = 417
Score = 63.9 bits (32), Expect = 3e-008
Identities = 135/168 (80%), Gaps = 1/168 (0%)
Strand = Plus / Minus
Query: 388 aactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagtggattt 447
|||||||| || || ||||||||||||||||| ||||| || | ||| |||| |||||||
Sbjct: 307 aactgctctcacccatgcttctgccaagctccatggggtggaaccaaacgcattggattt 248
Query: 448 ggacgtgagcttggagaagggggcattgataactacctgagcgtcaa-gcaagtcacgga 506
|| ||||| | |||||| |||| |||| |||||| |||| | || ||| || || |
Sbjct: 247 ggccgtgaattgggagaatggggacttgagaactacttgagtttgaaggcaggtgactca 188
Query: 507 gtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 187 gtatatctctgatgaaccatggggatggtacaaacctccttccaagct 140
>gb|BP591744.1|BP591744 BP591744 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-15-N20 3',
mRNA sequence
Length = 409
Score = 63.9 bits (32), Expect = 3e-008
Identities = 137/172 (79%)
Strand = Plus / Minus
Query: 383 gggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagtg 442
|||| |||||||| || || ||||||||||||||||| ||||| || | ||| |||| ||
Sbjct: 306 gggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcattg 247
Query: 443 gatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtca 502
||| ||| ||| | | |||||| |||| |||| |||||| |||| || ||||| || |
Sbjct: 246 gatctggccgttaattgggagaatggggacttgagaactacttgagtgtgaagcaggtga 187
Query: 503 cggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
| |||| |||||||||| || |||||||||||| || | || ||||||||
Sbjct: 186 ctcagtatatctctgatggaccatggggatggtacaaacctccttccaagct 135
>emb|BX814003.1|CNS0ADO4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB51ZG07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1705
Score = 63.9 bits (32), Expect = 3e-008
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 140 gacctgcgcatcttgagaaggggttctttattgaaccaactattattactgatatcacca 199
|||||| |||||| || ||||| ||||| ||||||||||| || ||||||||| | ||||
Sbjct: 1203 gacctgagcatctggaaaagggcttcttcattgaaccaaccatcattactgatgtaacca 1262
Query: 200 catcaatggaaatctggagggaggaagt 227
| |||||| |||| ||||| || |||||
Sbjct: 1263 cttcaatgcaaatatggagagaagaagt 1290
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 1499 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 1558
Query: 496 caagt 500
|||||
Sbjct: 1559 caagt 1563
Score = 42.1 bits (21), Expect = 0.12
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 28 gaagagggttgcaggcttgggccagttgttagtgaaggacagtatgagaagat 80
||||| || ||||||||||| || || ||||| |||||||||| ||||||||
Sbjct: 1091 gaagaaggatgcaggcttggtcctgtagttagcaaaggacagtacgagaagat 1143
>gb|T46358.1|T46358 9621 Lambda-PRL2 Arabidopsis thaliana cDNA clone 141L20T7, mRNA
sequence
Length = 515
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 202 tcaatggaaatctggagggaggaagtctttggtcc 236
||||||||||||||||| |||||||||||||||||
Sbjct: 92 tcaatggaaatctggagagaggaagtctttggtcc 126
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctgggg 425
||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 272 tgggtcaactgctctcagccatgcttctgccaagctccatgggg 315
>gb|BP565560.1|BP565560 BP565560 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-50-G07 3',
mRNA sequence
Length = 447
Score = 61.9 bits (31), Expect = 1e-007
Identities = 141/175 (80%), Gaps = 2/175 (1%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| | ||||
Sbjct: 315 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacccagt 256
Query: 442 ggatttggacgtgagcttggagaagggggcattga-taactacctgagcgtcaagcaagt 500
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 255 ggatttggccgtgaattgggagaatggggacttgagaaactacttgagtgtgaagcaggt 196
Query: 501 ca-cggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
| | |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 195 gagctcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 141
>gb|BP632820.1|BP632820 BP632820 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-28-I18 3',
mRNA sequence
Length = 362
Score = 61.9 bits (31), Expect = 1e-007
Identities = 97/119 (81%)
Strand = Plus / Minus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||||||||| ||||| | |||||| |||| |||| |||||| |||| || |||
Sbjct: 260 cgcagtggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaag 201
Query: 496 caagtcacggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| || || |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 200 caggtgactcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 142
>emb|BX823398.1|CNS0A7FR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS32ZE05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1648
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 202 tcaatggaaatctggagggaggaagtctttggtcc 236
||||||||||||||||| |||||||||||||||||
Sbjct: 1182 tcaatggaaatctggagagaggaagtctttggtcc 1216
Score = 58.0 bits (29), Expect = 2e-006
Identities = 96/117 (82%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcg-cag 440
||||| |||||||| || || ||||||||||||||||| ||||| || | ||| || |||
Sbjct: 1362 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgtcag 1421
Query: 441 tggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagca 497
||||||||| ||||| | |||||| |||| |||| |||||| |||| || |||||
Sbjct: 1422 tggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagca 1478
>gb|BP565479.1|BP565479 BP565479 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-50-A08 3',
mRNA sequence
Length = 442
Score = 60.0 bits (30), Expect = 5e-007
Identities = 141/174 (81%), Gaps = 3/174 (1%)
Strand = Plus / Minus
Query: 382 tgggtaaactgctcgcaaccctgcttctgccaagctccctggggcgggaacaagcgcagt 441
||||| |||||||| || || ||||||||||||||||| ||||| ||| ||| ||||||
Sbjct: 311 tgggtcaactgctctcagccatgcttctgccaagctccatgggg-tggaccaaacgcagt 253
Query: 442 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaa-gcaagt 500
|||||||| ||| | | |||||| |||| |||| |||||| |||| || || ||| ||
Sbjct: 252 ggatttggccgt-aattgggagaatggggacttgagaactacttgagtgtgaaggcaggt 194
Query: 501 cacggagtacatctctgatgagccgtggggatggtaccaatccccctccaagct 554
|| |||| ||||||||||| || |||||||||||| || | || ||||||||
Sbjct: 193 gactcagtatatctctgatgaaccatggggatggtacaaacctccttccaagct 140
>gb|AA586226.1|AA586226 28875 Lambda-PRL2 Arabidopsis thaliana cDNA clone 90C12XP 3', mRNA
sequence
Length = 541
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 275 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 334
Query: 496 caagt 500
|||||
Sbjct: 335 caagt 339
>gb|AA651436.1|AA651436 31550 Lambda-PRL2 Arabidopsis thaliana cDNA clone 191P13XP 3', mRNA
sequence
Length = 510
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 244 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 303
Query: 496 caagt 500
|||||
Sbjct: 304 caagt 308
>gb|AV789345.1|AV789345 AV789345 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-83-E12 3',
mRNA sequence
Length = 426
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 264 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 205
Query: 496 caagt 500
|||||
Sbjct: 204 caagt 200
>gb|AV792807.1|AV792807 AV792807 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-16-L22 3',
mRNA sequence
Length = 444
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 265 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 206
Query: 496 caagt 500
|||||
Sbjct: 205 caagt 201
>gb|AV800211.1|AV800211 AV800211 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-23-D11 3',
mRNA sequence
Length = 394
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 265 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 206
Query: 496 caagt 500
|||||
Sbjct: 205 caagt 201
>gb|AV518932.1|AV518932 AV518932 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD44b05F 3', mRNA
sequence
Length = 576
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 267 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 208
Query: 496 caagt 500
|||||
Sbjct: 207 caagt 203
Score = 50.1 bits (25), Expect = 5e-004
Identities = 72/88 (81%)
Strand = Plus / Minus
Query: 140 gacctgcgcatcttgagaaggggttctttattgaaccaactattattactgatatcacca 199
|||||| |||||| || ||||| ||||| ||||||||||| || || |||||| | |||
Sbjct: 563 gacctgagcatctggaaaagggcttcttcattgaaccaaccatcataactgatgtancca 504
Query: 200 catcaatggaaatctggagggaggaagt 227
| |||||| |||| ||||| || |||||
Sbjct: 503 cttcaatgcaaatatggagagaagaagt 476
>gb|AV532020.1|AV532020 AV532020 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB034c09F 3', mRNA sequence
Length = 322
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 267 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 208
Query: 496 caagt 500
|||||
Sbjct: 207 caagt 203
>gb|AV537751.1|AV537751 AV537751 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ102f06F 3', mRNA sequence
Length = 366
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 250 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 191
Query: 496 caagt 500
|||||
Sbjct: 190 caagt 186
>gb|CK121744.1|CK121744 201a08.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011A08201
5-PRIME, mRNA sequence
Length = 396
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 63 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 122
Query: 496 caagt 500
|||||
Sbjct: 123 caagt 127
>gb|BP575980.1|BP575980 BP575980 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-14-P07 3',
mRNA sequence
Length = 428
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 265 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 206
Query: 496 caagt 500
|||||
Sbjct: 205 caagt 201
>gb|BP577063.1|BP577063 BP577063 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-95-D09 3',
mRNA sequence
Length = 399
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 436 cgcagtggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaag 495
|||||||| |||||||| || ||||||||| |||| ||||||||||| |||| || |||
Sbjct: 265 cgcagtgggtttggacgagaacttggagaatggggacttgataactacttgagtgtgaag 206
Query: 496 caagt 500
|||||
Sbjct: 205 caagt 201
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 283,103
Number of Sequences: 1013581
Number of extensions: 283103
Number of successful extensions: 18120
Number of sequences better than 0.5: 101
Number of HSP's better than 0.5 without gapping: 98
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 17527
Number of HSP's gapped (non-prelim): 589
length of query: 672
length of database: 908,940,872
effective HSP length: 20
effective length of query: 652
effective length of database: 888,669,252
effective search space: 579412352304
effective search space used: 579412352304
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)